Citrus Sinensis ID: 008197
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 574 | 2.2.26 [Sep-21-2011] | |||||||
| Q7XJR9 | 571 | Calcium-dependent protein | yes | no | 0.972 | 0.977 | 0.758 | 0.0 | |
| Q9FKW4 | 523 | Calcium-dependent protein | no | no | 0.911 | 1.0 | 0.741 | 0.0 | |
| Q1PE17 | 534 | Calcium-dependent protein | no | no | 0.930 | 1.0 | 0.716 | 0.0 | |
| Q9SCS2 | 601 | CDPK-related kinase 5 OS= | no | no | 0.937 | 0.895 | 0.440 | 1e-124 | |
| P53681 | 602 | CDPK-related protein kina | N/A | no | 0.797 | 0.760 | 0.498 | 1e-123 | |
| Q9FMP5 | 528 | Calcium-dependent protein | no | no | 0.763 | 0.829 | 0.472 | 1e-123 | |
| O49717 | 554 | Calcium-dependent protein | no | no | 0.843 | 0.873 | 0.445 | 1e-123 | |
| Q9FX86 | 606 | CDPK-related kinase 8 OS= | no | no | 0.881 | 0.834 | 0.454 | 1e-122 | |
| Q3E9C0 | 523 | Calcium-dependent protein | no | no | 0.783 | 0.860 | 0.459 | 1e-121 | |
| Q38870 | 646 | Calcium-dependent protein | no | no | 0.773 | 0.687 | 0.477 | 1e-121 |
| >sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/587 (75%), Positives = 478/587 (81%), Gaps = 29/587 (4%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARN------DTTHKHQHQHQ 54
MG+C S+ + +SG N ++ N H + K R + H+ Q +
Sbjct: 1 MGLCFSS---AAKSSGHNRSSRNPHPHPPLTVVKSRPPRSPCSFMAVTIQKDHRTQPRRN 57
Query: 55 ERAKNYQQLKTKQHQKT-------NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
AK T H K N RR IP GKR DFGY KDFD RYTIGKLLGHG
Sbjct: 58 ATAKKTPTRHTPPHGKVREKVISNNGRRHGETIPYGKRVDFGYAKDFDHRYTIGKLLGHG 117
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167
QFGYTYVATDK GDRVAVKKI+K KM +PIAVEDVKREVKILQAL G
Sbjct: 118 QFGYTYVATDKKTGDRVAVKKIDK------------AKMTIPIAVEDVKREVKILQALTG 165
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
HENVV+FYNAFED N VYI MELCEGGELLDRILA+KDSRY+E+DAAVVVRQML+VAAEC
Sbjct: 166 HENVVRFYNAFEDKNSVYIVMELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAEC 225
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 287
HL GLVHRDMKPENFLFKS +EDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKR
Sbjct: 226 HLRGLVHRDMKPENFLFKSTEEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKR 285
Query: 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 347
+SGPESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISNSAKDFV
Sbjct: 286 RSGPESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFV 345
Query: 348 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 407
KKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK+SRLKQFALRALA
Sbjct: 346 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALA 405
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
+TLD+EELADLRDQFDAIDVDKNG ISLEEMRQALAKD PWKLK++RV EILQAID NTD
Sbjct: 406 TTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTD 465
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSI 527
G VDF EFVAA LHV+QLEEHDSEKW RS+AAFEKFDID DGFIT EELRMHTGLKGSI
Sbjct: 466 GFVDFGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLKGSI 525
Query: 528 DPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
+PLLEEADID DG+ISL EFRRLLRTASI SRNV SP G+ RK+
Sbjct: 526 EPLLEEADIDNDGKISLQEFRRLLRTASIKSRNV-RSPPGYLISRKV 571
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/572 (74%), Positives = 481/572 (84%), Gaps = 49/572 (8%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S +V+G++S R +++ ++K
Sbjct: 1 MGVCFSAIRVTGASSS---------RRSSQTKSK-------------------------- 25
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
T K +++R+TG IPCGKRTDFGY KDF YTIGKLLGHGQFGYTYVA + N
Sbjct: 26 -AAPTPIDTKASTKRRTGSIPCGKRTDFGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPN 84
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
GDRVAVK+++K+K M+LPIAVEDVKREV+IL AL+GHENVV+F+NAFED
Sbjct: 85 GDRVAVKRLDKSK------------MVLPIAVEDVKREVQILIALSGHENVVQFHNAFED 132
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
D+YVYI MELCEGGELLDRIL+KK +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPE
Sbjct: 133 DDYVYIVMELCEGGELLDRILSKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPE 192
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGV 300
NFLFKSA+ DS LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGV
Sbjct: 193 NFLFKSAQLDSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGV 252
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
ITYILLCGRRPFWD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLT
Sbjct: 253 ITYILLCGRRPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLT 312
Query: 361 AAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRD 420
AAQALSH WVREGG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRD
Sbjct: 313 AAQALSHAWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRD 372
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480
QFDAIDVDKNG ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA L
Sbjct: 373 QFDAIDVDKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAAL 432
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG 540
HVHQLEEHDSEKW LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG
Sbjct: 433 HVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDG 492
Query: 541 RISLSEFRRLLRTASISSRNVPPSPSGHRNPR 572
+ISL EFRRLLRTASISS+ PSP+GHRN R
Sbjct: 493 KISLHEFRRLLRTASISSQRA-PSPAGHRNLR 523
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q1PE17|CDPKI_ARATH Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/574 (71%), Positives = 460/574 (80%), Gaps = 40/574 (6%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S+ K + +GS N N + E N +HQ
Sbjct: 1 MGLCFSSPKATRRGTGSRNPNPDSPTQGKASEKVSNKNKKNTKKIQLRHQ---------- 50
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
G IP GKR DFGY KDFD RYTIGKLLGHGQFG+TYVATD N
Sbjct: 51 -----------------GGIPYGKRIDFGYAKDFDNRYTIGKLLGHGQFGFTYVATDNNN 93
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
G+RVAVK+I+K KM PI VEDVKREVKILQAL GHENVV F+NAFED
Sbjct: 94 GNRVAVKRIDK------------AKMTQPIEVEDVKREVKILQALGGHENVVGFHNAFED 141
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
Y+YI MELC+GGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHL GLVHRDMKPE
Sbjct: 142 KTYIYIVMELCDGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLRGLVHRDMKPE 201
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGV 300
NFLFKS +E SSLKATDFGLSDFIKPG KFQDIVGSAYYVAPEVLKR+SGPESDVWSIGV
Sbjct: 202 NFLFKSTEEGSSLKATDFGLSDFIKPGVKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGV 261
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
ITYILLCGRRPFWDKT+DGIF EV+R KPDFR PWP+ISN AKDFVKKLLVK+PRARLT
Sbjct: 262 ITYILLCGRRPFWDKTQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKEPRARLT 321
Query: 361 AAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRD 420
AAQALSH WV+EGG+ASE+PIDISVLNNMRQFVK+SRLKQ ALRALA T++++EL DLRD
Sbjct: 322 AAQALSHSWVKEGGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDDLRD 381
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480
QFDAID+DKNGSISLEEMRQALAKD+PWKLK++RV EILQA D NTDGLVDF+EFV A L
Sbjct: 382 QFDAIDIDKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVAAL 441
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG 540
HV+QLEEHDSEKW RS+AAF+KFDID DGFITPEELR+ TGLKGSI+PLLEEAD+D+DG
Sbjct: 442 HVNQLEEHDSEKWQQRSRAAFDKFDIDGDGFITPEELRLQTGLKGSIEPLLEEADVDEDG 501
Query: 541 RISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
RIS++EFRRLLR+AS+ S+NV SP G++ +K+
Sbjct: 502 RISINEFRRLLRSASLKSKNV-KSPPGYQLSQKM 534
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SCS2|CAMK5_ARATH CDPK-related kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 254/577 (44%), Positives = 348/577 (60%), Gaps = 39/577 (6%)
Query: 4 CLSTTKVSGSNSG--SNNNNANHHRNANKEEAKRRHNHHARNDTT---HKHQHQHQERAK 58
C++TT G S + + H +K+ R ++ N T K AK
Sbjct: 42 CVTTTNNEGKKSPFFPFYSPSPAHYFFSKKTPARSPATNSTNSTPKRFFKRPFPPPSPAK 101
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTD---------FGYDKDFDRRYTIGKLLGHGQF 109
+ + + ++H + + IP G + FG+ K F +Y +G +G G F
Sbjct: 102 HIRAVLARRHGSV--KPNSSAIPEGSEAEGGGVGLDKSFGFSKSFASKYELGDEVGRGHF 159
Query: 110 GYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166
GYT A K G +VAVK I K K M IA+EDV+REVKIL+AL+
Sbjct: 160 GYTCAAKFKKGDNKGQQVAVKVIPKAK------------MTTAIAIEDVRREVKILRALS 207
Query: 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
GH N+ FY+A+ED + VYI MELCEGGELLDRIL++ +YTE+DA V+ Q+L V A
Sbjct: 208 GHNNLPHFYDAYEDHDNVYIVMELCEGGELLDRILSR-GGKYTEEDAKTVMIQILNVVAF 266
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
CHL G+VHRD+KPENFLF S ++ S LKA DFGLSD+++P ++ DIVGSAYYVAPEVL
Sbjct: 267 CHLQGVVHRDLKPENFLFTSKEDTSQLKAIDFGLSDYVRPDERLNDIVGSAYYVAPEVLH 326
Query: 287 RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 346
R E+D+WS+GVI YILLCG RPFW +TE GIF+ VL+ P F PWP +S+ A+DF
Sbjct: 327 RSYSTEADIWSVGVIVYILLCGSRPFWARTESGIFRAVLKADPSFDDPPWPLLSSEARDF 386
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 406
VK+LL KDPR RLTAAQALSHPW+++ DA ++P+DI V MR +++ S L++ ALRAL
Sbjct: 387 VKRLLNKDPRKRLTAAQALSHPWIKDSNDA-KVPMDILVFKLMRAYLRSSSLRKAALRAL 445
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+ TL +EL LR+QF ++ KNG+ISLE ++ AL K +K+SR+ E L +
Sbjct: 446 SKTLTVDELFYLREQFALLEPSKNGTISLENIKSALMKMATDAMKDSRIPEFLGQLSALQ 505
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS 526
+DF EF AA L VHQLE D +W ++ A+E F+ + + I +EL GL S
Sbjct: 506 YRRMDFEEFCAAALSVHQLEALD--RWEQHARCAYELFEKEGNRPIMIDELASELGLGPS 563
Query: 527 ID--PLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
+ +L + DG++S F +LL +SSR +
Sbjct: 564 VPVHAVLHDWLRHTDGKLSFLGFVKLLH--GVSSRTI 598
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May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P53681|CRK_DAUCA CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/479 (49%), Positives = 314/479 (65%), Gaps = 21/479 (4%)
Query: 82 CGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRV 138
G FG+ K F ++ +G+ +G G FGYT A K G VAVK I K K
Sbjct: 132 AGLDKSFGFSKKFGSKFEVGEEVGRGHFGYTCRAKFKKGEFKGQDVAVKVIPKAK----- 186
Query: 139 VSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
M IA+EDV+REVKIL+AL GH N+V+FY+AFED VY+ MELCEGGELLD
Sbjct: 187 -------MTTAIAIEDVRREVKILRALTGHNNLVQFYDAFEDHTNVYVVMELCEGGELLD 239
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
RIL++ +YTE DA V+ Q+L V A CHL G+VHRD+KPENFLFKS EDS LKA DF
Sbjct: 240 RILSR-GGKYTEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFKSKDEDSQLKAIDF 298
Query: 259 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 318
GLSD++KP ++ DIVGSAYYVAPEVL R E+DVWSIGVI+YILLCG RPFW +TE
Sbjct: 299 GLSDYVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVISYILLCGSRPFWARTES 358
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
GIF+ VL+ F PWPS+S+ AKDFVK+LL KDPR R+TAAQAL H W++ D +
Sbjct: 359 GIFRAVLKANLSFDEPPWPSVSSEAKDFVKRLLNKDPRKRMTAAQALCHSWIKNSNDI-K 417
Query: 379 IPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEM 438
P+DI V M+ +++ S L++ ALRAL+ TL +EL L++QF ++ KNG+ISLE +
Sbjct: 418 FPLDILVFKLMKVYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPTKNGTISLENI 477
Query: 439 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
+QAL ++ +K+SRVL++L +++ +DF EF AA L VHQLE D +W ++
Sbjct: 478 KQALMRNSTDAMKDSRVLDLLVSLNALQYRRMDFEEFCAAALSVHQLEALD--RWEQHAR 535
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTAS 555
A++ F+ D + I EEL GL SI +L + DG++S + +LL S
Sbjct: 536 CAYDLFEKDGNRAIMIEELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGYVKLLHGVS 594
|
Daucus carota (taxid: 4039) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/468 (47%), Positives = 314/468 (67%), Gaps = 30/468 (6%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D Y++GK LG GQFG T++ T KA G + A K I K K+ V+ +D
Sbjct: 67 EDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKL----VNKED-------- 114
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+EDV+REV+I+ L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+
Sbjct: 115 IEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSER 172
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
AA ++R ++++ CH G++HRD+KPENFL + E+S LKATDFGLS F KPG+ F+
Sbjct: 173 AAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFK 232
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
DIVGSAYY+APEVLKRK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +LR DF
Sbjct: 233 DIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDF 292
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PWPSIS AKD VKK+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++Q
Sbjct: 293 SSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQ 352
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
F + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L
Sbjct: 353 FKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQ-GTRLS 411
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+
Sbjct: 412 EYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGY 465
Query: 512 ITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
IT EEL M+ G I ++ E D D DGRI+ EF ++R
Sbjct: 466 ITMEELEQALREFGMNDGR--DIKEIISEVDGDNDGRINYDEFVAMMR 511
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/518 (44%), Positives = 331/518 (63%), Gaps = 34/518 (6%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD---RRYTIG 101
TT + H HQ+ +K Q K+H T + + T+ K F+ + YT+G
Sbjct: 50 TTTQSNHHHQQESKPVNQQIEKKHVLTQPLKPI----VFRETETILGKPFEEIRKLYTLG 105
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG TY + + G+ A K I K K+ + QD ++DVKRE++I
Sbjct: 106 KELGRGQFGITYTCKENSTGNTYACKSILKRKLTRK----QD--------IDDVKREIQI 153
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+Q L+G EN+V+ A+ED +++ MELC G EL DRI+A+ Y+EK AA V+R +L
Sbjct: 154 MQYLSGQENIVEIKGAYEDRQSIHLVMELCGGSELFDRIIAQ--GHYSEKAAAGVIRSVL 211
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
V CH G++HRD+KPENFL S E++ LKATDFGLS FI+ GK ++DIVGSAYYVA
Sbjct: 212 NVVQICHFMGVIHRDLKPENFLLASTDENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVA 271
Query: 282 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
PEVL+R G E D+WS G+I YILLCG PFW +TE GIF E+++ + DF +PWPSIS
Sbjct: 272 PEVLRRSYGKEIDIWSAGIILYILLCGVPPFWSETEKGIFNEIIKGEIDFDSQPWPSISE 331
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQF 401
SAKD V+KLL KDP+ R++AAQAL HPW+R GG+A + PID +VL+ M+QF ++LK+
Sbjct: 332 SAKDLVRKLLTKDPKQRISAAQALEHPWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLKKL 390
Query: 402 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 461
AL+ +A +L +EE+ L+ F +D DK+G+I+ EE++ LAK L KL E+ V ++++A
Sbjct: 391 ALKVIAESLSEEEIKGLKTMFANMDTDKSGTITYEELKNGLAK-LGSKLTEAEVKQLMEA 449
Query: 462 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL---- 517
D + +G +D+ EF++AT+H ++ + + H+ AF+ FD D GFIT +EL
Sbjct: 450 ADVDGNGTIDYIEFISATMHRYRFDRDE----HVFK--AFQYFDKDNSGFITMDELESAM 503
Query: 518 -RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 554
G + SI ++ E D D DGRI+ EF ++R+
Sbjct: 504 KEYGMGDEASIKEVIAEVDTDNDGRINYEEFCAMMRSG 541
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FX86|CAMK8_ARATH CDPK-related kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/526 (45%), Positives = 320/526 (60%), Gaps = 20/526 (3%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
R H + H + + K L T ++ G FG+ K+F
Sbjct: 88 RRAFHPPSPAKHIRAALRRRKGKKEAALSGVTQLTTEVPQREEEEEVGLDKRFGFSKEFH 147
Query: 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
R +G+ +G G FGYT A K G VAVK I K+K M IA+
Sbjct: 148 SRVELGEEIGRGHFGYTCSAKFKKGELKGQVVAVKIIPKSK------------MTTAIAI 195
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
EDV+REVKILQAL+GH+N+V+FY+AFED+ VYIAMELCEGGELLDRILA+ +Y+E D
Sbjct: 196 EDVRREVKILQALSGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILAR-GGKYSEND 254
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
A V+ Q+L V A CH G+VHRD+KPENFL+ S +E+S LKA DFGLSDF++P ++ D
Sbjct: 255 AKPVIIQILNVVAFCHFQGVVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPDERLND 314
Query: 273 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
IVGSAYYVAPEVL R E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+ P F
Sbjct: 315 IVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFD 374
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 392
PWP +S+ AKDFVK+LL KDPR R++A+QAL HPW+R IP DI + M+ +
Sbjct: 375 EPPWPFLSSDAKDFVKRLLFKDPRRRMSASQALMHPWIRAYNTDMNIPFDILIFRQMKAY 434
Query: 393 VKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE 452
++ S L++ ALRAL+ TL +E+ L+ QF + +K+G I+++ +R ALA + +KE
Sbjct: 435 LRSSSLRKAALRALSKTLIKDEILYLKTQFSLLAPNKDGLITMDTIRMALASNATEAMKE 494
Query: 453 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 512
SR+ E L ++ +DF EF AA ++VHQ E D W + A+E FD + + I
Sbjct: 495 SRIPEFLALLNGLQYRGMDFEEFCAAAINVHQHESLDC--WEQSIRHAYELFDKNGNRAI 552
Query: 513 TPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASI 556
EEL G+ SI +L + DG++S F +LL S+
Sbjct: 553 VIEELASELGVGPSIPVHSVLHDWIRHTDGKLSFFGFVKLLHGVSV 598
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/485 (45%), Positives = 318/485 (65%), Gaps = 35/485 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D YT+GK LG GQFG T++ T KA G + A K I K K+ V+ +D
Sbjct: 62 EDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKL----VNKED-------- 109
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+EDV+REV+I+ L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+
Sbjct: 110 IEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSER 167
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
AA ++R ++++ CH G++HRD+KPENFL S E+S LKATDFGLS F KPG+ F+
Sbjct: 168 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFK 227
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
DIVGSAYY+APEVL+RK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +L + DF
Sbjct: 228 DIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDF 287
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PWP IS AKD V+K+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++Q
Sbjct: 288 SSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQ 347
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
F + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L
Sbjct: 348 FKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQ-GTRLS 406
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+
Sbjct: 407 EYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGY 460
Query: 512 ITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPS 564
IT EEL M+ G I ++ E D D DGRI+ EF ++R N P+
Sbjct: 461 ITTEELEQALREFGMNDGR--DIKEIISEVDGDNDGRINYEEFVAMMRKG-----NPDPN 513
Query: 565 PSGHR 569
P R
Sbjct: 514 PKKRR 518
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/469 (47%), Positives = 310/469 (66%), Gaps = 25/469 (5%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++F Y++G+ LG GQFG T++ +K G+ A K I K K+L + +D
Sbjct: 180 ENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLL----TDED-------- 227
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
VEDV+RE++I+ LAGH NV+ A+ED V++ MELC GGEL DRI+ + YTE+
Sbjct: 228 VEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQR--GHYTER 285
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
AA + R ++ V CH G++HRD+KPENFLF S +EDS LK DFGLS F KP + F
Sbjct: 286 KAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFFKPDEVFT 345
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
D+VGS YYVAPEVL+++ GPESDVWS GVI YILL G PFW +TE GIF++VL DF
Sbjct: 346 DVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDF 405
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +VL+ M+Q
Sbjct: 406 SSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSAVLSRMKQ 465
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
F ++ K+ ALR +A +L +EE+A L+ F ID D +G I+ EE++ L K + LK
Sbjct: 466 FSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGL-KRVGANLK 524
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
ES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF FD D GF
Sbjct: 525 ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFSYFDKDESGF 578
Query: 512 ITPEELRMHT---GLKGS-IDPLLEEADIDKDGRISLSEFRRLLRTASI 556
ITP+EL+ G++ + I+ ++ + D DKDGRI +EF +++ SI
Sbjct: 579 ITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSI 627
|
May play a role in signal transduction pathways that involve calcium as a second messenger. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 574 | ||||||
| 225431134 | 558 | PREDICTED: calcium-dependent protein kin | 0.959 | 0.987 | 0.814 | 0.0 | |
| 224134094 | 556 | calcium dependent protein kinase 18 [Pop | 0.965 | 0.996 | 0.807 | 0.0 | |
| 449434158 | 543 | PREDICTED: calcium-dependent protein kin | 0.940 | 0.994 | 0.840 | 0.0 | |
| 255561295 | 575 | calcium-dependent protein kinase, putati | 0.850 | 0.848 | 0.904 | 0.0 | |
| 224074263 | 557 | calcium dependent protein kinase 16 [Pop | 0.966 | 0.996 | 0.810 | 0.0 | |
| 395863620 | 550 | CDPK1 [Fragaria vesca] | 0.905 | 0.945 | 0.838 | 0.0 | |
| 147789502 | 534 | hypothetical protein VITISV_019799 [Viti | 0.925 | 0.994 | 0.792 | 0.0 | |
| 350538611 | 565 | calcium-dependent protein kinase [Solanu | 0.883 | 0.897 | 0.839 | 0.0 | |
| 325683724 | 552 | calcium-dependent protein kinase [Fragar | 0.961 | 1.0 | 0.803 | 0.0 | |
| 16904224 | 572 | calcium-dependent protein kinase CPK4 [N | 0.933 | 0.937 | 0.809 | 0.0 |
| >gi|225431134|ref|XP_002267099.1| PREDICTED: calcium-dependent protein kinase 16 [Vitis vinifera] gi|297735013|emb|CBI17375.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/581 (81%), Positives = 507/581 (87%), Gaps = 30/581 (5%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQH---QHQERA 57
MG CLS TKV SNS + N A A + + T++K+Q Q +R
Sbjct: 1 MGACLSATKVRSSNSNTTANAA----------ATKNTRPRGSSKTSNKNQQKKPQEGDRN 50
Query: 58 KNYQQLKTKQHQKT----NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTY 113
++ QQ + Q QK N RR TG+IPCGKRTDFGY KDFD RYTIGKLLGHGQFGYTY
Sbjct: 51 RSNQQHRNPQPQKVKDRANGRRGTGIIPCGKRTDFGYAKDFDARYTIGKLLGHGQFGYTY 110
Query: 114 VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173
VATDKANGDRVAVK+IEKNK MILPIAVEDVKREVKIL+AL GHENVV+
Sbjct: 111 VATDKANGDRVAVKRIEKNK------------MILPIAVEDVKREVKILEALTGHENVVQ 158
Query: 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 233
F+NAFEDD+YVYI MELCEGGELLDRILAKKDSRY+EKDAA VVRQML+VAAECHLHGLV
Sbjct: 159 FHNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYSEKDAAKVVRQMLKVAAECHLHGLV 218
Query: 234 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 293
HRDMKPENFLFKS KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPES
Sbjct: 219 HRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPES 278
Query: 294 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 353
DVWSIGVITYILLCG+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVK
Sbjct: 279 DVWSIGVITYILLCGKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVK 338
Query: 354 DPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDE 413
DPRARLTAAQALSHPWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDE
Sbjct: 339 DPRARLTAAQALSHPWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDE 398
Query: 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFS 473
ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+
Sbjct: 399 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFT 458
Query: 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 533
EFVAATLHVHQLEEHDS+KW RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEE
Sbjct: 459 EFVAATLHVHQLEEHDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEE 518
Query: 534 ADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
ADIDKDGRISL+EFRRLLRTASISSR V PS SG RNPRK+
Sbjct: 519 ADIDKDGRISLAEFRRLLRTASISSRQV-PSSSGFRNPRKI 558
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134094|ref|XP_002327754.1| calcium dependent protein kinase 18 [Populus trichocarpa] gi|222836839|gb|EEE75232.1| calcium dependent protein kinase 18 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/576 (80%), Positives = 498/576 (86%), Gaps = 22/576 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHK--HQHQHQERAK 58
MG C ST KVSGSNS NNN H R + + + H HQ+ +
Sbjct: 1 MGACFSTIKVSGSNS---NNNVIHSRKEPTKPQTKTTKATTATRKKQEVVHHHQNNKNVN 57
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N + K K +K +S+ IPCGKRTDFGYDKDFD RYTIGKLLGHGQFGYTYVA DK
Sbjct: 58 NEAEKKLKVKEKQSSK----AIPCGKRTDFGYDKDFDMRYTIGKLLGHGQFGYTYVAIDK 113
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
ANGDRVAVK+IEKNK M+LPIAVEDVKREVKIL+ L GHENVV+FYNA
Sbjct: 114 ANGDRVAVKRIEKNK------------MVLPIAVEDVKREVKILRELTGHENVVQFYNAL 161
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 238
EDD+YVYI MELCEGGELLDRIL+KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMK
Sbjct: 162 EDDSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMK 221
Query: 239 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSI 298
PENFLFKS K DS LKATDFGLSDFIKPG+KFQDIVGSAYYVAPEVLKRKSGPESDVWSI
Sbjct: 222 PENFLFKSTKGDSPLKATDFGLSDFIKPGRKFQDIVGSAYYVAPEVLKRKSGPESDVWSI 281
Query: 299 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
GVITYILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+IS SAKDFV KLLVKDPRAR
Sbjct: 282 GVITYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISTSAKDFVNKLLVKDPRAR 341
Query: 359 LTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADL 418
LTAAQALSHPWVREGG ASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EELADL
Sbjct: 342 LTAAQALSHPWVREGGVASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEELADL 401
Query: 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478
+DQFDAIDVDKNG+ISLEEMRQALAKDLPWKLKESRVLEI+QAID NTDGLVDF+EFVAA
Sbjct: 402 KDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEIVQAIDSNTDGLVDFTEFVAA 461
Query: 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDK 538
LHVHQL+EH+SEKW LRSQAAFEKFDIDRDG+ITPEELRMHTGL+GSIDPLLEEADIDK
Sbjct: 462 ALHVHQLQEHNSEKWQLRSQAAFEKFDIDRDGYITPEELRMHTGLRGSIDPLLEEADIDK 521
Query: 539 DGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
DG+ISLSEFRRLLRTAS+SSRNV PSPSGHR K+
Sbjct: 522 DGKISLSEFRRLLRTASMSSRNV-PSPSGHRKSHKI 556
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449434158|ref|XP_004134863.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] gi|449491358|ref|XP_004158870.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/559 (84%), Positives = 496/559 (88%), Gaps = 19/559 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG+C S +KVSGSNS +NN NHHR + + + DT+ + + +N
Sbjct: 1 MGVCFSASKVSGSNSNTNNTVVNHHRRGSTANPQ-----PSTTDTSQNQKRPNDNPKRNS 55
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
QQLK K+ K SRRQ+GVIPCGKRTDFGY K+FD RYTIGKLLGHGQFGYTYVA DK N
Sbjct: 56 QQLKIKE--KNVSRRQSGVIPCGKRTDFGYHKNFDERYTIGKLLGHGQFGYTYVAIDKGN 113
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
GDRVAVKKIEKNK MILPIAVEDVKREVKILQ L GHENVV+F+NAFED
Sbjct: 114 GDRVAVKKIEKNK------------MILPIAVEDVKREVKILQELTGHENVVQFHNAFED 161
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
D+YVYI MELCEGGELLDRIL+KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRD+KPE
Sbjct: 162 DSYVYIVMELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDLKPE 221
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGV 300
NFLFKSAKEDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKRKSGPESDVWSIGV
Sbjct: 222 NFLFKSAKEDSHLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGV 281
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS SAKDF+KKLLVKDPRARLT
Sbjct: 282 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISPSAKDFIKKLLVKDPRARLT 341
Query: 361 AAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRD 420
AAQALSH WVREGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+ +EELADLRD
Sbjct: 342 AAQALSHRWVREGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIGEEELADLRD 401
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480
QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDF+EFVAATL
Sbjct: 402 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDVNTDGLVDFTEFVAATL 461
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG 540
HVHQLEEHDS KW RSQAAFEKFDID+DGFITPEELRMHTGLKGSIDPLLEEADIDKDG
Sbjct: 462 HVHQLEEHDSVKWQQRSQAAFEKFDIDKDGFITPEELRMHTGLKGSIDPLLEEADIDKDG 521
Query: 541 RISLSEFRRLLRTASISSR 559
+ISLSEFRRLLRTASISSR
Sbjct: 522 KISLSEFRRLLRTASISSR 540
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255561295|ref|XP_002521658.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223539049|gb|EEF40645.1| calcium-dependent protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/501 (90%), Positives = 470/501 (93%), Gaps = 13/501 (2%)
Query: 74 RRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 133
RR GVIPCGKRTDFGY KDFD+RY+IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK
Sbjct: 88 RRPGGVIPCGKRTDFGYAKDFDKRYSIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 147
Query: 134 ILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 193
M+LPIAVEDVKREVKILQ LAGHENVV FYNAFEDD++VYI MELCEG
Sbjct: 148 ------------MVLPIAVEDVKREVKILQELAGHENVVHFYNAFEDDSFVYIVMELCEG 195
Query: 194 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253
GELLDRIL KKDSRYTEKDAAV+VRQML+VAAECHLHGLVHRDMKPENFLFKS K+DS L
Sbjct: 196 GELLDRILLKKDSRYTEKDAAVIVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKDDSPL 255
Query: 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFW 313
KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPFW
Sbjct: 256 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFW 315
Query: 314 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
DKTEDGIFKEVLRNKPDFRRKPWPSIS+SAKDFVKKLLVKDPR RLTAAQALSHPWVREG
Sbjct: 316 DKTEDGIFKEVLRNKPDFRRKPWPSISSSAKDFVKKLLVKDPRVRLTAAQALSHPWVREG 375
Query: 374 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 433
G+ASEIPIDISVLNNMRQFVKYSR KQFALRALASTLDDEEL+DLRDQFDAIDVDKNGSI
Sbjct: 376 GNASEIPIDISVLNNMRQFVKYSRFKQFALRALASTLDDEELSDLRDQFDAIDVDKNGSI 435
Query: 434 SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493
SLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDFSEFVAA LHVHQLEEH+SEKW
Sbjct: 436 SLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAAALHVHQLEEHNSEKW 495
Query: 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
RSQAAFEKFDID+DGFIT EELRMHTGL+GSIDPLLEEADIDKDG+ISLSEFRRLLRT
Sbjct: 496 QHRSQAAFEKFDIDKDGFITSEELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRLLRT 555
Query: 554 ASISSRNVPPSPSGHRNPRKL 574
ASISSRN PSPSGHRN RK+
Sbjct: 556 ASISSRNA-PSPSGHRNSRKM 575
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224074263|ref|XP_002304327.1| calcium dependent protein kinase 16 [Populus trichocarpa] gi|222841759|gb|EEE79306.1| calcium dependent protein kinase 16 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/576 (81%), Positives = 504/576 (87%), Gaps = 21/576 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHAR--NDTTHKHQHQHQERAK 58
MG C ST +SGSNS +NN ANH+R + R R + H H HQ +
Sbjct: 1 MGACFSTINISGSNS-NNNTKANHNRKEPTKPQTRTTKAATRKKQEVVH-HHHQINKNVN 58
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N + K K +K +S+ IPCGKRTDFGYDKDFD RYTIGKLLGHGQFGYTYVATDK
Sbjct: 59 NEAEKKLKVKEKQSSK----AIPCGKRTDFGYDKDFDIRYTIGKLLGHGQFGYTYVATDK 114
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
NGDRVAVK+I+KNK M+LPIAVEDVKREV+ILQ L GHENVV+F+NAF
Sbjct: 115 GNGDRVAVKRIDKNK------------MVLPIAVEDVKREVRILQELTGHENVVQFHNAF 162
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 238
EDD+YVYI MELCEGGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMK
Sbjct: 163 EDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMK 222
Query: 239 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSI 298
PENFLFKS KEDS LKATDFGLSDFIKPG+KF+DIVGSAYYVAPEVLKR SGPESDVWSI
Sbjct: 223 PENFLFKSTKEDSPLKATDFGLSDFIKPGRKFKDIVGSAYYVAPEVLKRNSGPESDVWSI 282
Query: 299 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+IS SAKDFV+KLLVKDPRAR
Sbjct: 283 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISTSAKDFVQKLLVKDPRAR 342
Query: 359 LTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADL 418
LTAAQALSHPWVREGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EELADL
Sbjct: 343 LTAAQALSHPWVREGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEELADL 402
Query: 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478
+DQFDAIDVDKNG+ISLEEMRQALAKDLPWKLKES VLEI+QAID NTDGLVDF+EFVAA
Sbjct: 403 KDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESLVLEIVQAIDSNTDGLVDFTEFVAA 462
Query: 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDK 538
LHVHQLEEH+SEKW LRSQAAFEKFDIDRDG+ITPEELRMH+GL+GS+DPLLEEADIDK
Sbjct: 463 ALHVHQLEEHNSEKWQLRSQAAFEKFDIDRDGYITPEELRMHSGLRGSVDPLLEEADIDK 522
Query: 539 DGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
DGRISLSEFRRLLRTAS+SS+NV P PSGHRN +KL
Sbjct: 523 DGRISLSEFRRLLRTASMSSQNV-PDPSGHRNSKKL 557
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|395863620|gb|AFN80337.1| CDPK1 [Fragaria vesca] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/533 (83%), Positives = 479/533 (89%), Gaps = 13/533 (2%)
Query: 42 RNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG 101
R TT Q N Q K K K +SR++TGVIPCGKRTDFGYDK+FDRRYTIG
Sbjct: 31 RKQTTRPQPAQTNHHRPNEAQKKNKHKSKQSSRQKTGVIPCGKRTDFGYDKNFDRRYTIG 90
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLGHGQFGYTYVATD++NGDRVAVK I+KNK MILPIAVEDVKREV+I
Sbjct: 91 KLLGHGQFGYTYVATDRSNGDRVAVKGIDKNK------------MILPIAVEDVKREVEI 138
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQALAGHENVV+F+NA EDD YVYI MELCEGGELLDRIL KKDSRYTEKDAAVVVRQML
Sbjct: 139 LQALAGHENVVQFFNACEDDTYVYIVMELCEGGELLDRILEKKDSRYTEKDAAVVVRQML 198
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
+VAAECHLHGLVHRDMKPENFLFKS DS LKATDFGLSDFIKPGKKFQDIVGSAYYVA
Sbjct: 199 KVAAECHLHGLVHRDMKPENFLFKSKALDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVA 258
Query: 282 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
PEVL+RKSGPESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISN
Sbjct: 259 PEVLRRKSGPESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISN 318
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQF 401
SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS+IPIDISVLNNMRQFV+YSRLKQF
Sbjct: 319 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASDIPIDISVLNNMRQFVRYSRLKQF 378
Query: 402 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 461
ALRALASTL+ EELADL+DQFDAIDVDKNGSISLEEMRQALAKD+PWKLK+SRV+EIL+A
Sbjct: 379 ALRALASTLNAEELADLKDQFDAIDVDKNGSISLEEMRQALAKDIPWKLKDSRVVEILEA 438
Query: 462 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 521
ID NTDGLVDF+EFVAATLHVHQLEEHDSEKW S+AAFEKFDIDRDG+ITP+ELRMHT
Sbjct: 439 IDSNTDGLVDFTEFVAATLHVHQLEEHDSEKWQQLSRAAFEKFDIDRDGYITPDELRMHT 498
Query: 522 GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
GLKGSIDPLL+EADIDKDG+ISLSEFRRLLRTAS+S + V PSG RN R++
Sbjct: 499 GLKGSIDPLLDEADIDKDGKISLSEFRRLLRTASMSPQKV-ADPSGQRNSRQV 550
|
Source: Fragaria vesca Species: Fragaria vesca Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147789502|emb|CAN69589.1| hypothetical protein VITISV_019799 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/577 (79%), Positives = 490/577 (84%), Gaps = 46/577 (7%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQH---QHQERA 57
MG CLS TKV SNS + N A A + + T++K+Q Q +R
Sbjct: 1 MGACLSATKVRSSNSNTTANAA----------ATKNTRPRGSSKTSNKNQQKKPQEGDRN 50
Query: 58 KNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATD 117
++ QQ + Q QK KDFD RYTIGKLLGHGQFGYTYVATD
Sbjct: 51 RSNQQHRNPQPQKA--------------------KDFDARYTIGKLLGHGQFGYTYVATD 90
Query: 118 KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177
KANGDRVAVK+IEKNK MILPIAVEDVKREVKIL+AL GHENVV+F+NA
Sbjct: 91 KANGDRVAVKRIEKNK------------MILPIAVEDVKREVKILEALTGHENVVQFHNA 138
Query: 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237
FEDD+YVYI MELCEGGELLDRILAKKDSRY+EKDAA VVRQML+VAAECHLHGLVHRDM
Sbjct: 139 FEDDSYVYIVMELCEGGELLDRILAKKDSRYSEKDAAKVVRQMLKVAAECHLHGLVHRDM 198
Query: 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWS 297
KPENFLFKS KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWS
Sbjct: 199 KPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWS 258
Query: 298 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 357
IGVITYILLCG+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVKDPRA
Sbjct: 259 IGVITYILLCGKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVKDPRA 318
Query: 358 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELAD 417
RLTAAQALSHPWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDEELAD
Sbjct: 319 RLTAAQALSHPWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDEELAD 378
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
LRDQFDAIDVDKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+EFVA
Sbjct: 379 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFTEFVA 438
Query: 478 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID 537
ATLHVHQLEEHDS+KW RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEEADID
Sbjct: 439 ATLHVHQLEEHDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEEADID 498
Query: 538 KDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
KDGRISL+EFRRLLRTASISSR V PS SG RNPRK+
Sbjct: 499 KDGRISLAEFRRLLRTASISSRQV-PSSSGFRNPRKI 534
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538611|ref|NP_001234607.1| calcium-dependent protein kinase [Solanum lycopersicum] gi|241994912|gb|ACS74732.1| calcium-dependent protein kinase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/524 (83%), Positives = 476/524 (90%), Gaps = 17/524 (3%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
N D + +Q Q++ +N QQ + K +SRRQ GVIPCGKRTDFGY KDF++R
Sbjct: 53 NQEGCRDKGNINQKNQQKQPRNSQQ-----NVKPSSRRQGGVIPCGKRTDFGYHKDFEKR 107
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
YTIGKLLGHGQFGYTYVATDK++GDRVAVK+IEKNK M+LPIAVEDVKR
Sbjct: 108 YTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNK------------MVLPIAVEDVKR 155
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EVKIL+AL GHENVV+FYN+FEDDNYVYI MELCEGGELLDRIL+KKDSRYTEKDAA+VV
Sbjct: 156 EVKILKALGGHENVVQFYNSFEDDNYVYIVMELCEGGELLDRILSKKDSRYTEKDAAIVV 215
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQML+VAAECHLHGLVHRDMKPENFLFKS KEDS LKATDFGLSDFI+PGKKFQDIVGSA
Sbjct: 216 RQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIRPGKKFQDIVGSA 275
Query: 278 YYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337
YYVAPEVLKR+SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW
Sbjct: 276 YYVAPEVLKRRSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWS 335
Query: 338 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSR 397
+ISNSAKDFVKK+LVKDPRARLTAAQALSHPWVREGGDASEIP+DISVL+NMRQFVKYSR
Sbjct: 336 NISNSAKDFVKKILVKDPRARLTAAQALSHPWVREGGDASEIPLDISVLSNMRQFVKYSR 395
Query: 398 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE 457
LKQFALRALASTLD+EE+ADLRDQF AIDVDKNG ISLEEMRQALAKDLPWK+KESRVLE
Sbjct: 396 LKQFALRALASTLDEEEIADLRDQFSAIDVDKNGVISLEEMRQALAKDLPWKMKESRVLE 455
Query: 458 ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 517
ILQAID NTDGLVDF EFVAATLHVHQLEEH+S KW RSQAAFEKFD+D+DGFITPEEL
Sbjct: 456 ILQAIDSNTDGLVDFPEFVAATLHVHQLEEHNSTKWQQRSQAAFEKFDVDKDGFITPEEL 515
Query: 518 RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
+MHTGL+GSIDPLLEEADIDKDG+IS+SEFRRLLRTAS+SS V
Sbjct: 516 KMHTGLRGSIDPLLEEADIDKDGKISISEFRRLLRTASMSSPTV 559
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|325683724|gb|ADZ44603.1| calcium-dependent protein kinase [Fragaria x ananassa] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2350), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/574 (80%), Positives = 495/574 (86%), Gaps = 22/574 (3%)
Query: 1 MGICLSTTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNY 60
MG CL+T KV+GSNS +N NN R TT Q N
Sbjct: 1 MGGCLTTAKVTGSNSNTNTNNNPATTTTAVVN---------RKQTTRPPPAQTNHHRANE 51
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
Q K K K +SR++TG+IPCGKRTDFGYDK+FDRRY IGKLLGHGQFGYTYV TD++N
Sbjct: 52 AQKKHKHKPKQSSRQKTGMIPCGKRTDFGYDKNFDRRYMIGKLLGHGQFGYTYVVTDRSN 111
Query: 121 GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180
GDRVAVK+I+KNK MILPIAVEDVKREVKILQALAGHENVV+FYNA ED
Sbjct: 112 GDRVAVKRIDKNK------------MILPIAVEDVKREVKILQALAGHENVVQFYNACED 159
Query: 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
D YVYI MELCEGGELLDRIL KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPE
Sbjct: 160 DTYVYIVMELCEGGELLDRILEKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPE 219
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGV 300
NFLFKS DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSG ESDVWSIGV
Sbjct: 220 NFLFKSKALDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGRESDVWSIGV 279
Query: 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISNSAKDF KKLLVKDPRARLT
Sbjct: 280 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFAKKLLVKDPRARLT 339
Query: 361 AAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRD 420
AAQALSHPWVREGGDAS+IPIDISVLNNMRQFV+YSRLKQFALRALASTL+ EELADL+D
Sbjct: 340 AAQALSHPWVREGGDASDIPIDISVLNNMRQFVRYSRLKQFALRALASTLNAEELADLKD 399
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480
QFDAIDVDKNGSISLEEMRQALAKD+PWKLK+SRV+EIL+AID NTDGLVDF+EFVAATL
Sbjct: 400 QFDAIDVDKNGSISLEEMRQALAKDIPWKLKDSRVVEILEAIDSNTDGLVDFTEFVAATL 459
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG 540
HVHQLEEHDSEKW S+AAFEKFDIDRDG+ITP+ELRMHTGLKGSIDPLL+EADIDKDG
Sbjct: 460 HVHQLEEHDSEKWQQLSRAAFEKFDIDRDGYITPDELRMHTGLKGSIDPLLDEADIDKDG 519
Query: 541 RISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
+ISLSEFRRLLRTAS+SS+ V SPSG RN R++
Sbjct: 520 KISLSEFRRLLRTASMSSQKV-ASPSGQRNSRQV 552
|
Source: Fragaria x ananassa Species: Fragaria x ananassa Genus: Fragaria Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|16904224|gb|AAL30819.1|AF435451_1 calcium-dependent protein kinase CPK4 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/552 (80%), Positives = 484/552 (87%), Gaps = 16/552 (2%)
Query: 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQ-TG 78
N AN + K+ +H + H+ QHQ++ Q K+H N RRQ +G
Sbjct: 33 NKANPPSTSTITSTKQEGSHCNKQKVKDNHKSQHQKQQPRNSQQNVKKH--NNGRRQKSG 90
Query: 79 VIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRV 138
VI CGKRTDFGYDKDFD+R+TIGKLLGHGQFGYTYVAT K+NGDRVAVK+IEKNK
Sbjct: 91 VIACGKRTDFGYDKDFDKRFTIGKLLGHGQFGYTYVATHKSNGDRVAVKRIEKNK----- 145
Query: 139 VSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
M+LPIAVEDVKREVKIL+AL+GHENVV+F NAFEDDNYVYI MELCEGGELLD
Sbjct: 146 -------MVLPIAVEDVKREVKILKALSGHENVVQFNNAFEDDNYVYIVMELCEGGELLD 198
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
RILAKKDSRY EKDAA+VVRQML+ AA+CHLHGLVHRDMKPENFLFKS+KEDS LKATDF
Sbjct: 199 RILAKKDSRYAEKDAAIVVRQMLKEAAQCHLHGLVHRDMKPENFLFKSSKEDSPLKATDF 258
Query: 259 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 318
GLSDFI+PGKKFQDIVGSAYYVAPEVLKR+SGPESD WSIGVITYILLCGRR FWDKTED
Sbjct: 259 GLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDEWSIGVITYILLCGRRRFWDKTED 318
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
GIFKEVLRNKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE
Sbjct: 319 GIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
Query: 379 IPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEM 438
IP+DISVL+NMRQFVKYSRLKQFALRALAST+D+EELAD+RDQF AIDVDKNG ISLEEM
Sbjct: 379 IPLDISVLSNMRQFVKYSRLKQFALRALASTVDEEELADVRDQFSAIDVDKNGVISLEEM 438
Query: 439 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
RQALAKDLPWK+KESRVLEILQAID N+DGL+DF EFVAATLHVHQLEEH+S KW RSQ
Sbjct: 439 RQALAKDLPWKMKESRVLEILQAIDSNSDGLLDFPEFVAATLHVHQLEEHNSIKWQERSQ 498
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISS 558
AAFE+FD+DRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG+ISLSEFRRLLRTASISS
Sbjct: 499 AAFEEFDVDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGKISLSEFRRLLRTASISS 558
Query: 559 RNV-PPSPSGHR 569
R V P+ G R
Sbjct: 559 RMVTSPTVRGSR 570
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 574 | ||||||
| TAIR|locus:2827826 | 571 | CPK16 "AT2G17890" [Arabidopsis | 0.897 | 0.901 | 0.811 | 4e-225 | |
| TAIR|locus:2156947 | 523 | CPK28 "calcium-dependent prote | 0.853 | 0.936 | 0.823 | 5.8e-224 | |
| TAIR|locus:2177023 | 528 | CPK17 "calcium-dependent prote | 0.766 | 0.833 | 0.472 | 7.6e-112 | |
| TAIR|locus:2075885 | 646 | CPK2 "calmodulin-domain protei | 0.879 | 0.781 | 0.442 | 3.3e-111 | |
| TAIR|locus:2150225 | 523 | CPK34 "AT5G19360" [Arabidopsis | 0.787 | 0.864 | 0.459 | 6.8e-111 | |
| TAIR|locus:2012232 | 606 | AT1G49580 [Arabidopsis thalian | 0.878 | 0.831 | 0.456 | 7.8e-110 | |
| TAIR|locus:2128409 | 529 | CDPK6 "calcium-dependent prote | 0.759 | 0.824 | 0.474 | 1e-109 | |
| TAIR|locus:2175503 | 610 | CPK1 "calcium dependent protei | 0.775 | 0.729 | 0.472 | 2.6e-109 | |
| TAIR|locus:2015846 | 521 | CPK33 "calcium-dependent prote | 0.761 | 0.838 | 0.466 | 3e-108 | |
| TAIR|locus:2062764 | 595 | CRK3 "AT2G46700" [Arabidopsis | 0.804 | 0.776 | 0.466 | 3.9e-108 |
| TAIR|locus:2827826 CPK16 "AT2G17890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2173 (770.0 bits), Expect = 4.0e-225, P = 4.0e-225
Identities = 434/535 (81%), Positives = 459/535 (85%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKT-------NSRRQTGVIPCGKRTDFGYDKDFDRRYT 99
H+ Q + AK T H K N RR IP GKR DFGY KDFD RYT
Sbjct: 50 HRTQPRRNATAKKTPTRHTPPHGKVREKVISNNGRRHGETIPYGKRVDFGYAKDFDHRYT 109
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
IGKLLGHGQFGYTYVATDK GDRVAVKKI+K KM +PIAVEDVKREV
Sbjct: 110 IGKLLGHGQFGYTYVATDKKTGDRVAVKKIDK------------AKMTIPIAVEDVKREV 157
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
KILQAL GHENVV+FYNAFED N VYI MELCEGGELLDRILA+KDSRY+E+DAAVVVRQ
Sbjct: 158 KILQALTGHENVVRFYNAFEDKNSVYIVMELCEGGELLDRILARKDSRYSERDAAVVVRQ 217
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 279
ML+VAAECHL GLVHRDMKPENFLFKS +EDS LKATDFGLSDFIKPGKKF DIVGSAYY
Sbjct: 218 MLKVAAECHLRGLVHRDMKPENFLFKSTEEDSPLKATDFGLSDFIKPGKKFHDIVGSAYY 277
Query: 280 VAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
VAPEVLKR+SGPESDVWSIGVI+YILLCGRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+I
Sbjct: 278 VAPEVLKRRSGPESDVWSIGVISYILLCGRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTI 337
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 399
SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK+SRLK
Sbjct: 338 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKFSRLK 397
Query: 400 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 459
QFALRALA+TLD+EELADLRDQFDAIDVDKNG ISLEEMRQALAKD PWKLK++RV EIL
Sbjct: 398 QFALRALATTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEIL 457
Query: 460 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 519
QAID NTDG VDF EFVAA LHV+QLEEHDSEKW RS+AAFEKFDID DGFIT EELRM
Sbjct: 458 QAIDSNTDGFVDFGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRM 517
Query: 520 HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL 574
HTGLKGSI+PLLEEADID DG+ISL EFRRLLRTASI SRNV SP G+ RK+
Sbjct: 518 HTGLKGSIEPLLEEADIDNDGKISLQEFRRLLRTASIKSRNVR-SPPGYLISRKV 571
|
|
| TAIR|locus:2156947 CPK28 "calcium-dependent protein kinase 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2162 (766.1 bits), Expect = 5.8e-224, P = 5.8e-224
Identities = 414/503 (82%), Positives = 461/503 (91%)
Query: 70 KTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI 129
K +++R+TG IPCGKRTDFGY KDF YTIGKLLGHGQFGYTYVA + NGDRVAVK++
Sbjct: 34 KASTKRRTGSIPCGKRTDFGYSKDFHDHYTIGKLLGHGQFGYTYVAIHRPNGDRVAVKRL 93
Query: 130 EKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 189
+K+K M+LPIAVEDVKREV+IL AL+GHENVV+F+NAFEDD+YVYI ME
Sbjct: 94 DKSK------------MVLPIAVEDVKREVQILIALSGHENVVQFHNAFEDDDYVYIVME 141
Query: 190 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249
LCEGGELLDRIL+KK +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPENFLFKSA+
Sbjct: 142 LCEGGELLDRILSKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKSAQL 201
Query: 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 309
DS LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLCGR
Sbjct: 202 DSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLCGR 261
Query: 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
RPFWD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLTAAQALSH W
Sbjct: 262 RPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALSHAW 321
Query: 370 VREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDK 429
VREGG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRDQFDAIDVDK
Sbjct: 322 VREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDVDK 381
Query: 430 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489
NG ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA LHVHQLEEHD
Sbjct: 382 NGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEEHD 441
Query: 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRR 549
SEKW LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG+ISL EFRR
Sbjct: 442 SEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHEFRR 501
Query: 550 LLRTASISSRNVPPSPSGHRNPR 572
LLRTASISS+ P SP+GHRN R
Sbjct: 502 LLRTASISSQRAP-SPAGHRNLR 523
|
|
| TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 220/466 (47%), Positives = 313/466 (67%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D Y++GK LG GQFG T++ T KA G + A K I K K+ V+ +D
Sbjct: 67 EDVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKL----VNKED-------- 114
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+EDV+REV+I+ L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+
Sbjct: 115 IEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSER 172
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
AA ++R ++++ CH G++HRD+KPENFL + E+S LKATDFGLS F KPG+ F+
Sbjct: 173 AAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGEVFK 232
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
DIVGSAYY+APEVLKRK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +LR DF
Sbjct: 233 DIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGHVDF 292
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PWPSIS AKD VKK+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++Q
Sbjct: 293 SSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQ 352
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
F + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L
Sbjct: 353 FKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQ-GTRLS 411
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+
Sbjct: 412 EYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGY 465
Query: 512 ITPEELRM---HTGLKGSID--PLLEEADIDKDGRISLSEFRRLLR 552
IT EEL G+ D ++ E D D DGRI+ EF ++R
Sbjct: 466 ITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYDEFVAMMR 511
|
|
| TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 237/536 (44%), Positives = 329/536 (61%)
Query: 31 EEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRR---QTGVIPCGKRTD 87
EE+KR + E K +TK K ++ V G RT+
Sbjct: 113 EESKREVVVQPESAKPETKSESKPETTKPETTSETKPETKAEPQKPKHMRRVSSAGLRTE 172
Query: 88 FGYDK---DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
+ +F Y++G+ LG GQFG T++ +K G+ A K I K K+L + +D
Sbjct: 173 SVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLL----TDED- 227
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
VEDV+RE++I+ LAGH NV+ A+ED V++ MELC GGEL DRI+ +
Sbjct: 228 -------VEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQR- 279
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
YTE+ AA + R ++ V CH G++HRD+KPENFLF S +EDS LK DFGLS F
Sbjct: 280 -GHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSREEDSLLKTIDFGLSMFF 338
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
KP + F D+VGS YYVAPEVL+++ GPESDVWS GVI YILL G PFW +TE GIF++V
Sbjct: 339 KPDEVFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLSGVPPFWAETEQGIFEQV 398
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
L DF PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +
Sbjct: 399 LHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCHPWVQIDGVAPDKPLDSA 458
Query: 385 VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK 444
VL+ M+QF ++ K+ ALR +A +L +EE+A L+ F ID D +G I+ EE++ L K
Sbjct: 459 VLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGL-K 517
Query: 445 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKF 504
+ LKES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF F
Sbjct: 518 RVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFSYF 571
Query: 505 DIDRDGFITPEELRM---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLRTASI 556
D D GFITP+EL+ G++ + I+ ++ + D DKDGRI +EF +++ SI
Sbjct: 572 DKDESGFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGSI 627
|
|
| TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 222/483 (45%), Positives = 317/483 (65%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D YT+GK LG GQFG T++ T KA G + A K I K K+ V+ +D
Sbjct: 62 EDVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKL----VNKED-------- 109
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+EDV+REV+I+ L G N+V+ A+ED + V++ MELC GGEL DRI+AK Y+E+
Sbjct: 110 IEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAK--GHYSER 167
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
AA ++R ++++ CH G++HRD+KPENFL S E+S LKATDFGLS F KPG+ F+
Sbjct: 168 AAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFK 227
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
DIVGSAYY+APEVL+RK GPE+D+WSIGV+ YILLCG PFW ++E+GIF +L + DF
Sbjct: 228 DIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDF 287
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PWP IS AKD V+K+L DP+ RLTAAQ L+HPW++E G+A ++P+D +V++ ++Q
Sbjct: 288 SSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQ 347
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
F + K+ ALR +A L +EE+ L++ F +D D +G+I+LEE+RQ LAK +L
Sbjct: 348 FKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQ-GTRLS 406
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E V ++++A D + +G +D+ EF+AAT+H+++L+ + HL S AF+ FD D G+
Sbjct: 407 EYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREE----HLYS--AFQHFDKDNSGY 460
Query: 512 ITPEELRM---HTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPS 566
IT EEL G+ D ++ E D D DGRI+ EF ++R N P+P
Sbjct: 461 ITTEELEQALREFGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKG-----NPDPNPK 515
Query: 567 GHR 569
R
Sbjct: 516 KRR 518
|
|
| TAIR|locus:2012232 AT1G49580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
Identities = 241/528 (45%), Positives = 324/528 (61%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLK--TKQHQKTNSRRQTGVIPCGKRTDFGYDKD 93
R H + H + + K L T+ + R + + KR FG+ K+
Sbjct: 88 RRAFHPPSPAKHIRAALRRRKGKKEAALSGVTQLTTEVPQREEEEEVGLDKR--FGFSKE 145
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
F R +G+ +G G FGYT A K G VAVK I K+K M I
Sbjct: 146 FHSRVELGEEIGRGHFGYTCSAKFKKGELKGQVVAVKIIPKSK------------MTTAI 193
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
A+EDV+REVKILQAL+GH+N+V+FY+AFED+ VYIAMELCEGGELLDRILA+ +Y+E
Sbjct: 194 AIEDVRREVKILQALSGHKNLVQFYDAFEDNANVYIAMELCEGGELLDRILAR-GGKYSE 252
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
DA V+ Q+L V A CH G+VHRD+KPENFL+ S +E+S LKA DFGLSDF++P ++
Sbjct: 253 NDAKPVIIQILNVVAFCHFQGVVHRDLKPENFLYTSKEENSQLKAIDFGLSDFVRPDERL 312
Query: 271 QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
DIVGSAYYVAPEVL R E+DVWSIGVI YILLCG RPFW +TE GIF+ VL+ P
Sbjct: 313 NDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPS 372
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
F PWP +S+ AKDFVK+LL KDPR R++A+QAL HPW+R IP DI + M+
Sbjct: 373 FDEPPWPFLSSDAKDFVKRLLFKDPRRRMSASQALMHPWIRAYNTDMNIPFDILIFRQMK 432
Query: 391 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL 450
+++ S L++ ALRAL+ TL +E+ L+ QF + +K+G I+++ +R ALA + +
Sbjct: 433 AYLRSSSLRKAALRALSKTLIKDEILYLKTQFSLLAPNKDGLITMDTIRMALASNATEAM 492
Query: 451 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDG 510
KESR+ E L ++ +DF EF AA ++VHQ E D W + A+E FD + +
Sbjct: 493 KESRIPEFLALLNGLQYRGMDFEEFCAAAINVHQHESLDC--WEQSIRHAYELFDKNGNR 550
Query: 511 FITPEELRMHTGLKGSID--PLLEEADIDKDGRISLSEFRRLLRTASI 556
I EEL G+ SI +L + DG++S F +LL S+
Sbjct: 551 AIVIEELASELGVGPSIPVHSVLHDWIRHTDGKLSFFGFVKLLHGVSV 598
|
|
| TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 219/462 (47%), Positives = 309/462 (66%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R Y G+ LG GQFG TY+ T K +VA K I R+V D +EDV
Sbjct: 76 RTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTR----RLVHKDD--------IEDV 123
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+REV+I+ L+GH N+V A+ED + V + MELCEGGEL DRI++K Y+E+ AA
Sbjct: 124 RREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISK--GLYSERAAAD 181
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ RQM+ V CH G++HRD+KPENFLF S E+S LKATDFGLS F KPG KF+D+VG
Sbjct: 182 LCRQMVMVVHSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVG 241
Query: 276 SAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
SAYYVAPEVLKR GPE+D+WS GVI YILL G PFW + E GIF +L+ + DF P
Sbjct: 242 SAYYVAPEVLKRNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSADP 301
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKY 395
WP++S+ AKD V+K+L DP+ RLTAA+ L+HPW+RE G+AS+ P+D +VL+ M+QF
Sbjct: 302 WPALSDGAKDLVRKMLKYDPKDRLTAAEVLNHPWIREDGEASDKPLDNAVLSRMKQFRAM 361
Query: 396 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 455
++LK+ AL+ +A L +EE+ L++ F ++D D NG ++LEE+R L K L K+ E+ +
Sbjct: 362 NKLKKMALKVIAENLSEEEIIGLKEMFKSLDTDNNGIVTLEELRTGLPK-LGSKISEAEI 420
Query: 456 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
++++A D + DG +D+ EF++AT+H++++E D HL + AF+ FD D G+IT E
Sbjct: 421 RQLMEAADMDGDGSIDYLEFISATMHMNRIERED----HLYT--AFQFFDNDNSGYITME 474
Query: 516 ELRM-----HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
EL + + G SI ++ E D D+DG+I+ EF +++
Sbjct: 475 ELELAMKKYNMGDDKSIKEIIAEVDTDRDGKINYEEFVAMMK 516
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| TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 222/470 (47%), Positives = 308/470 (65%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++F Y++G+ LG GQFG T++ +K G A K I K K+L + +D
Sbjct: 144 ENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLL----TDED-------- 191
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
VEDV+RE++I+ LAGH NV+ A+ED V++ ME C GGEL DRI+ + YTE+
Sbjct: 192 VEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQR--GHYTER 249
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
AA + R ++ V CH G++HRD+KPENFLF S EDS LK DFGLS F KP F
Sbjct: 250 KAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHEDSLLKTIDFGLSMFFKPDDVFT 309
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
D+VGS YYVAPEVL+++ GPE+DVWS GVI YILL G PFW +TE GIF++VL DF
Sbjct: 310 DVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWAETEQGIFEQVLHGDLDF 369
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV+ G A + P+D +VL+ M+Q
Sbjct: 370 SSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWVQVDGVAPDKPLDSAVLSRMKQ 429
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
F ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K + LK
Sbjct: 430 FSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL-KRVGANLK 488
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
ES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF FD D G+
Sbjct: 489 ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGSGY 542
Query: 512 ITPEELRM---HTGLKG-SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 557
ITP+EL+ G++ I+ L+ + D D DGRI +EF +++ SI+
Sbjct: 543 ITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 592
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| TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 216/463 (46%), Positives = 308/463 (66%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
YT+ K LG GQFG TY+ T+K+ G R A K I K K++ + D ED++R
Sbjct: 73 YTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTK----GDK--------EDMRR 120
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++I+Q L+G N+V+F A+ED+ V + MELC GGEL DRILAK Y+E+ AA V
Sbjct: 121 EIQIMQHLSGQPNIVEFKGAYEDEKAVNLVMELCAGGELFDRILAK--GHYSERAAASVC 178
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ++ V CH G++HRD+KPENFL S E + +KATDFGLS FI+ G+ ++DIVGSA
Sbjct: 179 RQIVNVVNICHFMGVMHRDLKPENFLLSSKDEKALIKATDFGLSVFIEEGRVYKDIVGSA 238
Query: 278 YYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337
YYVAPEVLKR+ G E D+WS G+I YILL G PFW +TE GIF +L + DF +PWP
Sbjct: 239 YYVAPEVLKRRYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFDAILEGEIDFESQPWP 298
Query: 338 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSR 397
SISNSAKD V+++L +DP+ R++AA+ L HPW+REGG+AS+ PID +VL+ M+QF ++
Sbjct: 299 SISNSAKDLVRRMLTQDPKRRISAAEVLKHPWLREGGEASDKPIDSAVLSRMKQFRAMNK 358
Query: 398 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE 457
LK+ AL+ +A +D EE+ L+ F ID D +G+I+ EE+++ LAK L +L E+ V +
Sbjct: 359 LKKLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAK-LGSRLTEAEVKQ 417
Query: 458 ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 517
++ A D + +G +D+ EF+ AT+H H+LE +++ AF+ FD D G+IT +EL
Sbjct: 418 LMDAADVDGNGSIDYIEFITATMHRHRLESNENV------YKAFQHFDKDGSGYITTDEL 471
Query: 518 RMHT-----GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555
G +I +L + D D DGRI+ EF ++R+ +
Sbjct: 472 EAALKEYGMGDDATIKEILSDVDADNDGRINYDEFCAMMRSGN 514
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| TAIR|locus:2062764 CRK3 "AT2G46700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 222/476 (46%), Positives = 312/476 (65%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
FGY K+F +Y +GK +G G FG+T K GD I+ + I ++++S KM
Sbjct: 133 FGYGKNFGAKYELGKEVGRGHFGHTCSGRGK-KGD------IKDHPIAVKIIS--KAKMT 183
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
IA+EDV+REVK+L++L+GH+ ++K+Y+A ED N VYI MELC+GGELLDRILA+ +
Sbjct: 184 TAIAIEDVRREVKLLKSLSGHKYLIKYYDACEDANNVYIVMELCDGGELLDRILAR-GGK 242
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
Y E DA +V Q+L V + CHL G+VHRD+KPENFLF S++EDS LK DFGLSDFI+P
Sbjct: 243 YPEDDAKAIVVQILTVVSFCHLQGVVHRDLKPENFLFTSSREDSDLKLIDFGLSDFIRPD 302
Query: 268 KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
++ DIVGSAYYVAPEVL R E+D+WSIGVITYILLCG RPFW +TE GIF+ VLR
Sbjct: 303 ERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRTVLRT 362
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN 387
+P++ PWPS S+ KDFVK+LL KD R R++A QAL+HPW+R+ D+ IP+DI +
Sbjct: 363 EPNYDDVPWPSCSSEGKDFVKRLLNKDYRKRMSAVQALTHPWLRD--DSRVIPLDILIYK 420
Query: 388 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 447
++ ++ + L++ AL+ALA L + EL LR QF + +K+GS+SLE + AL ++
Sbjct: 421 LVKAYLHATPLRRAALKALAKALTENELVYLRAQFMLLGPNKDGSVSLENFKTALMQNAT 480
Query: 448 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 507
++ESRV EIL ++ + F EF AA + +HQLE D+ W + A F+ F+ +
Sbjct: 481 DAMRESRVPEILHTMESLAYRKMYFEEFCAAAISIHQLEAVDA--WEEIATAGFQHFETE 538
Query: 508 RDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPP 563
+ IT EEL + S L + DG++S F + L ++ + + P
Sbjct: 539 GNRVITIEELARELNVGASAYGHLRDWVRSSDGKLSYLGFTKFLHGVTLRAAHARP 594
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FKW4 | CDPKS_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7412 | 0.9111 | 1.0 | no | no |
| Q1PE17 | CDPKI_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7160 | 0.9303 | 1.0 | no | no |
| Q7XJR9 | CDPKG_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7580 | 0.9721 | 0.9772 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.979 |
| 3rd Layer | 2.7.11 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00036780001 | SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (558 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 574 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 3e-93 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-80 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-57 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-56 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-55 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-54 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 9e-53 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-52 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 2e-52 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 4e-48 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 2e-47 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 4e-45 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 1e-43 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 4e-43 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 2e-42 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 5e-42 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-41 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 5e-40 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-39 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-39 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 1e-38 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-38 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 8e-38 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-37 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-37 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 4e-37 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 6e-37 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 8e-36 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 2e-35 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-35 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-34 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 5e-34 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 1e-33 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-33 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-33 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 2e-33 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 3e-33 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 2e-32 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 3e-32 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-31 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 6e-31 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 2e-30 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 2e-30 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 4e-30 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 6e-30 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 8e-30 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-29 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-29 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-29 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 2e-29 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 1e-28 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 1e-28 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-28 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-28 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 4e-28 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 7e-28 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-27 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-27 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 3e-27 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 4e-27 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 5e-27 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 5e-27 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 6e-27 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 7e-27 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 7e-27 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 9e-27 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 9e-27 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-26 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 1e-26 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 2e-26 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 5e-26 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-26 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 5e-26 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 1e-25 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 1e-25 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-25 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-25 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 3e-25 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 6e-25 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 7e-25 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 9e-25 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 9e-25 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-24 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 1e-24 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 1e-24 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 2e-24 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 2e-24 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-24 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 2e-24 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 3e-24 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 5e-24 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 6e-24 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 8e-24 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 9e-24 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 1e-23 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 1e-23 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 1e-23 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 1e-23 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 2e-23 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-23 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 2e-23 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 2e-23 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 3e-23 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 7e-23 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 8e-23 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 8e-23 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 9e-23 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 9e-23 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 9e-23 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 9e-23 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 9e-23 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-22 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-22 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 2e-22 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 3e-22 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 4e-22 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 5e-22 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 5e-22 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 9e-22 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-21 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-21 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 2e-21 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-21 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 2e-21 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 2e-21 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 4e-21 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 5e-21 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 5e-21 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 7e-21 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 7e-21 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 7e-21 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 9e-21 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 9e-21 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-20 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-20 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 2e-20 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-20 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-20 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 2e-20 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 3e-20 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 3e-20 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 4e-20 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 5e-20 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 6e-20 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 6e-20 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 6e-20 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 7e-20 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 8e-20 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-19 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-19 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 2e-19 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 2e-19 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-19 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-19 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 6e-19 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 7e-19 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-18 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 1e-18 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 1e-18 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 2e-18 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 3e-18 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 3e-18 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 3e-18 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 4e-18 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 4e-18 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 5e-18 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 6e-18 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 6e-18 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 1e-17 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-17 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 1e-17 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-17 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 2e-17 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-17 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 2e-17 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 3e-17 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 3e-17 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 6e-17 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 7e-17 | |
| PTZ00184 | 149 | PTZ00184, PTZ00184, calmodulin; Provisional | 9e-17 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 2e-16 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 4e-16 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 5e-16 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 9e-16 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-15 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 1e-15 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 1e-15 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 2e-15 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 4e-15 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 6e-15 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 1e-14 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 1e-14 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 3e-14 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 7e-14 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 7e-14 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 8e-14 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 2e-13 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 2e-13 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 3e-13 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 5e-13 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 7e-13 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 8e-13 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 9e-13 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 9e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 9e-13 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 2e-12 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 2e-12 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 2e-12 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 2e-12 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-12 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 4e-12 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 4e-12 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 4e-12 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 6e-12 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 1e-11 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-11 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-11 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 3e-11 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 3e-11 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 3e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 4e-11 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 4e-11 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 5e-11 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 6e-11 | |
| cd00051 | 63 | cd00051, EFh, EF-hand, calcium binding motif; A di | 8e-11 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 8e-11 | |
| PTZ00183 | 158 | PTZ00183, PTZ00183, centrin; Provisional | 1e-10 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 1e-10 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-10 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-10 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 2e-10 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 2e-10 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 3e-10 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-10 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 4e-10 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 5e-10 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 5e-10 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 6e-10 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 6e-10 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-10 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 7e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 9e-10 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 1e-09 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 1e-09 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 1e-09 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-09 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-09 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 3e-09 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-09 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-09 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-09 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-09 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-09 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 9e-09 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 1e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-08 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 1e-08 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 2e-08 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-08 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-08 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 3e-08 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 4e-08 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 9e-08 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-07 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 3e-07 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-07 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 5e-07 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 6e-07 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 8e-07 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 1e-06 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 1e-06 | |
| COG5126 | 160 | COG5126, FRQ1, Ca2+-binding protein (EF-Hand super | 2e-06 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-06 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-06 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 5e-06 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 1e-05 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 2e-05 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 5e-05 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 7e-05 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 8e-05 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 8e-05 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 9e-05 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 1e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-04 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 1e-04 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 1e-04 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 1e-04 | |
| pfam10591 | 112 | pfam10591, SPARC_Ca_bdg, Secreted protein acidic a | 2e-04 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-04 | |
| cd00252 | 116 | cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ bi | 2e-04 | |
| pfam13833 | 53 | pfam13833, EF_hand_6, EF-hand domain pair | 3e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 4e-04 | |
| COG4248 | 637 | COG4248, COG4248, Uncharacterized protein with pro | 6e-04 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 7e-04 | |
| pfam13405 | 30 | pfam13405, EF_hand_4, EF-hand domain | 7e-04 | |
| pfam13202 | 25 | pfam13202, EF_hand_3, EF hand | 0.001 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 0.001 | |
| pfam13499 | 60 | pfam13499, EF_hand_5, EF-hand domain pair | 0.002 | |
| PTZ00284 | 467 | PTZ00284, PTZ00284, protein kinase; Provisional | 0.002 | |
| pfam00036 | 29 | pfam00036, efhand, EF hand | 0.002 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 0.002 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 0.002 | |
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 0.002 | |
| smart00054 | 29 | smart00054, EFh, EF-hand, calcium binding motif | 0.002 | |
| COG0478 | 304 | COG0478, COG0478, RIO-like serine/threonine protei | 0.002 | |
| cd00052 | 67 | cd00052, EH, Eps15 homology domain; found in prote | 0.003 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 285 bits (733), Expect = 3e-93
Identities = 120/275 (43%), Positives = 159/275 (57%), Gaps = 23/275 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I + LG G FG Y+A DK G VA+K I+K KI E + R
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDR--------------ERILR 46
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+KIL+ L H N+V+ Y+ FED++ +Y+ ME CEGG+L D + KK R +E +A +
Sbjct: 47 EIKILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLL--KKRGRLSEDEARFYL 103
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
RQ+L H G+VHRD+KPEN L ED +K DFGL+ + PG+K VG+
Sbjct: 104 RQILSALEYLHSKGIVHRDLKPENILLD---EDGHVKLADFGLARQLDPGEKLTTFVGTP 160
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKPDFRRKP 335
Y+APEVL K G D+WS+GVI Y LL G+ PF D +FK++ + KP F
Sbjct: 161 EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W IS AKD ++KLLVKDP RLTA +AL HP+
Sbjct: 221 WD-ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 4e-80
Identities = 103/279 (36%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + LG G FG Y A K G VAVK ++K R + + R
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKK-----RSEKSKKDQTAR--------R 47
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++IL+ L H N+V+ +AFED +++Y+ ME CEGG+L D + +E +A +
Sbjct: 48 EIRILRRL-SHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIA 104
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 276
Q+LR H +G++HRD+KPEN L E+ +K DFGL+ +K VG+
Sbjct: 105 LQILRGLEYLHSNGIIHRDLKPENILLD---ENGVVKIADFGLAKKLLKSSSSLTTFVGT 161
Query: 277 AYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDF 331
+Y+APEVL GP+ DVWS+GVI Y LL G+ PF + + + +L +F
Sbjct: 162 PWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEF 221
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W S S AKD +KK L KDP R TA + L HPW
Sbjct: 222 DEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 192 bits (491), Expect = 4e-57
Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 51/304 (16%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
DF GK++G G F +A +K A+K ++K +++ ++ K+
Sbjct: 1 DDFK----FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI------KEKKV----- 45
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+ VK E ++L L GH ++K Y F+D+ +Y +E GELL I +K EK
Sbjct: 46 -KYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYI--RKYGSLDEK 102
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
++L H G++HRD+KPEN L +D +K TDFG + + P +
Sbjct: 103 CTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPE 159
Query: 272 DI---------------------VGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGR 309
VG+A YV+PE+L K +G SD+W++G I Y +L G+
Sbjct: 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219
Query: 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQAL 365
PF E F+++L+ + F P+ AKD ++KLLV DP+ RL +
Sbjct: 220 PPFRGSNEYLTFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELK 275
Query: 366 SHPW 369
+HP+
Sbjct: 276 AHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 1e-56
Identities = 93/276 (33%), Positives = 142/276 (51%), Gaps = 28/276 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I + +G G FG Y A K G VA+K I ++ S + + I+
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVI-------KLESKEKKEKII--------N 46
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E++IL+ H N+VK+Y ++ + ++I ME C GG L D +L + TE A V
Sbjct: 47 EIQILKKCK-HPNIVKYYGSYLKKDELWIVMEFCSGGSLKD-LLKSTNQTLTESQIAYVC 104
Query: 218 RQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+++L+ +LH G++HRD+K N L S D +K DFGLS + K +VG
Sbjct: 105 KELLK--GLEYLHSNGIIHRDIKAANILLTS---DGEVKLIDFGLSAQLSDTKARNTMVG 159
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+ Y++APEV+ K ++D+WS+G IT I L G+ P+ + ++ N P R
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLG-ITAIELAEGKPPYSELPPMKALFKIATNGPPGLR 218
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
P S+ KDF+KK L K+P R TA Q L HP+
Sbjct: 219 NPEKW-SDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 1e-55
Identities = 91/268 (33%), Positives = 134/268 (50%), Gaps = 56/268 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y+A DK G +VA+K I+K +E++ RE++IL+
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKED--------------SSSLLEELLREIEILK 46
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N+VK Y FED+N++Y+ ME CEGG L D +L + + + +E + ++ Q+L
Sbjct: 47 KLN-HPNIVKLYGVFEDENHLYLVMEYCEGGSLKD-LLKENEGKLSEDEILRILLQILEG 104
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAP 282
H +G++HRD+KPEN L S ++ +K DFGLS + K + IVG+ Y+AP
Sbjct: 105 LEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAP 162
Query: 283 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
EVL K +SD+WS+GVI Y L
Sbjct: 163 EVLLGKGYYSEKSDIWSLGVILYEL----------------------------------- 187
Query: 341 NSAKDFVKKLLVKDPRARLTAAQALSHP 368
KD ++K+L KDP R +A + L H
Sbjct: 188 PELKDLIRKMLQKDPEKRPSAKEILEHL 215
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 1e-54
Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 29/272 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG + K G A+K ++K KI+ R VE E IL
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRK------------EVEHTLTERNILS 48
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H +VK + AF+ + +Y+ +E GGEL + K+ R++E+ A +++ +
Sbjct: 49 RIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHL--SKEGRFSEERARFYAAEIV-L 104
Query: 224 AAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 281
A E H G+++RD+KPEN L D +K TDFGL+ + G + G+ Y+A
Sbjct: 105 ALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLA 161
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PEVL K G D WS+GV+ Y +L G+ PF+ + I++++L++ F P +S
Sbjct: 162 PEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF---P-EFLS 217
Query: 341 NSAKDFVKKLLVKDPRARLTAAQA---LSHPW 369
A+D + LL KDP RL + A +HP+
Sbjct: 218 PEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 9e-53
Identities = 90/283 (31%), Positives = 144/283 (50%), Gaps = 32/283 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+T G+LLG G FG Y+A DK G+ +AVK +E L +E ++
Sbjct: 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVE-------------LSGDSEEELEALE 47
Query: 157 REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
RE++IL +L H N+V++Y + E+ N + I +E GG L + KK + E
Sbjct: 48 REIRILSSLQ-HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL--KKFGKLPEPVIR 104
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQ 271
RQ+L A H +G+VHRD+K N L S D +K DFG + I+ G+
Sbjct: 105 KYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DGVVKLADFGCAKRLGDIETGEGTG 161
Query: 272 DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVLRNK 328
+ G+ Y++APEV++ + G +D+WS+G + G+ P+ + ++K +
Sbjct: 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE 221
Query: 329 PDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P P +S AKDF++K L +DP+ R TA + L HP++
Sbjct: 222 PP----EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 2e-52
Identities = 97/280 (34%), Positives = 139/280 (49%), Gaps = 32/280 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y +G L+G G FG Y + GD VA+K+I KI A++ +
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-------------EEALKSIM 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E+ +L+ L H N+VK+ + E + +YI +E E G L I KK + E AV
Sbjct: 48 QEIDLLKNLK-HPNIVKYIGSIETSDSLYIILEYAENGSLRQII--KKFGPFPESLVAVY 104
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
V Q+L+ A H G++HRD+K N L +D +K DFG++ K +VG
Sbjct: 105 VYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKDDASVVG 161
Query: 276 SAYYVAPEVLKRKSGP--ESDVWSIGVITYI-LLCGRRPFWDKTEDGI-FKEVLRNKPDF 331
+ Y++APEV+ SG SD+WS+G T I LL G P++D F+ V + P
Sbjct: 162 TPYWMAPEVI-EMSGASTASDIWSLG-CTVIELLTGNPPYYDLNPMAALFRIVQDDHP-- 217
Query: 332 RRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P P IS KDF+ + KDP R TA Q L HPW+
Sbjct: 218 ---PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 179 bits (457), Expect = 2e-52
Identities = 87/286 (30%), Positives = 138/286 (48%), Gaps = 44/286 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y I K +G G FG Y+ K++G +K+I DL + ED
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEI-------------DLSNMSEKEREDAL 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAA 214
EVKIL+ L H N++K+Y +FE+ + I ME +GG+L +I +K + E+
Sbjct: 48 NEVKILKKLN-HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQIL 106
Query: 215 VVVRQMLRVAAECHLHG--LVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
Q+ A +LH ++HRD+KP+N FL + +K DFG+S K
Sbjct: 107 DWFVQL--CLALKYLHSRKILHRDIKPQNIFLTS----NGLVKLGDFGIS------KVLS 154
Query: 272 D-------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+VG+ YY++PE+ + K +SD+WS+G + Y L + PF + + +
Sbjct: 155 STVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALK 214
Query: 324 VLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+L+ + P PS S+ ++ V LL KDP R + AQ L P
Sbjct: 215 ILKGQY----PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSP 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 4e-48
Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 39/378 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y I + LG G FG Y+A D+ VA+K + K VE R
Sbjct: 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKL------------ESKSKEVERFLR 46
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVV 216
E++IL +L N+VK Y+ F+D+ +Y+ ME +GG L D + +E +A +
Sbjct: 47 EIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFI 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-------K 269
+ Q+L H G++HRD+KPEN L + +K DFGL+ +
Sbjct: 107 LAQILSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPAL 164
Query: 270 FQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
VG+ Y+APEVL + SD+WS+G+ Y LL G PF + + L
Sbjct: 165 PSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224
Query: 326 RN---------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376
+ IS +A D +KKLL KDP+ RL+++ LSH +
Sbjct: 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLK 284
Query: 377 SEIPIDISVLNN-MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 435
D+ ++ + + + +L S L D + ++ NG S
Sbjct: 285 ESDLSDLLKPDDSAPLRLSLPPSLEALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSS 344
Query: 436 EEMRQALAKDLPWKLKES 453
+L + S
Sbjct: 345 PHNSSSLLLSTASSKRSS 362
|
Length = 384 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 2e-47
Identities = 90/279 (32%), Positives = 130/279 (46%), Gaps = 39/279 (13%)
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166
G +G ++A K+ GD A+K I+K MI V+ V E IL A
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIKVIKKAD------------MIRKNQVDQVLTERDILS-QA 50
Query: 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
VVK Y +F+ +Y+ ME GG+L L + E A + + +++
Sbjct: 51 QSPYVVKLYYSFQGKKNLYLVMEYLPGGDL--ASLLENVGSLDEDVARIYIAEIVLALEY 108
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---------IKPGKKFQDIVGSA 277
H +G++HRD+KP+N L S + LK TDFGLS K+ + IVG+
Sbjct: 109 LHSNGIIHRDLKPDNILIDS---NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTP 165
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APEV+ + D WS+G I Y L G PF +T + IF+ +L K W
Sbjct: 166 DYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK-----IEW 220
Query: 337 PS---ISNSAKDFVKKLLVKDPRARLTAAQA---LSHPW 369
P +S+ A D + KLLV DP RL A +HP+
Sbjct: 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 4e-45
Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 30/280 (10%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
K+LG G G Y K G A+KKI D + + RE+
Sbjct: 5 RVKVLGQGSSGVVYKVRHKPTGKIYALKKIH---------VDGDEEFRKQLL-----REL 50
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
K L++ VVK Y AF + + I +E +GG L D L KK + E A + RQ
Sbjct: 51 KTLRS-CESPYVVKCYGAFYKEGEISIVLEYMDGGSLAD--LLKKVGKIPEPVLAYIARQ 107
Query: 220 MLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVG 275
+L+ +LH ++HRD+KP N L S E +K DFG+S ++ + VG
Sbjct: 108 ILKGLD--YLHTKRHIIHRDIKPSNLLINSKGE---VKIADFGISKVLENTLDQCNTFVG 162
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y++PE ++ +S +D+WS+G+ G+ PF F E+++ D
Sbjct: 163 TVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPF-LPPGQPSFFELMQAICDGPPP 221
Query: 335 PWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
P+ S +DF+ L KDP+ R +AA+ L HP++++
Sbjct: 222 SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 156 bits (398), Expect = 1e-43
Identities = 94/284 (33%), Positives = 140/284 (49%), Gaps = 36/284 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ K LG G FG + K +G A+K + K KI+ LK VE V
Sbjct: 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-------KLKQ-----VEHVLN 50
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E +ILQ++ H +V Y +F+DD+ +Y+ ME GGEL + +K R+ E A
Sbjct: 51 EKRILQSI-RHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHL--RKSGRFPEPVARFYA 107
Query: 218 RQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
Q++ +A E +LH +V+RD+KPEN L S D +K TDFG + +K + G
Sbjct: 108 AQVV-LALE-YLHSLDIVYRDLKPENLLLDS---DGYIKITDFGFAKRVKGRT--YTLCG 160
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APE++ K G D W++G++ Y +L G PF+D I++++L K F
Sbjct: 161 TPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF--- 217
Query: 335 PWPS-ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
PS S AKD ++ LL D RL +HPW
Sbjct: 218 --PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAG 259
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 4e-43
Identities = 86/280 (30%), Positives = 141/280 (50%), Gaps = 26/280 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G Y ATD+A G VA+KK+ K Q+ ++I E+ I++
Sbjct: 27 IGEGASGEVYKATDRATGKEVAIKKMRLRK--------QNKELI--------INEILIMK 70
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
H N+V +Y+++ + +++ ME +GG L D I+ + R E A V R++L+
Sbjct: 71 DCK-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTD-IITQNFVRMNEPQIAYVCREVLQG 128
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAP 282
H ++HRD+K +N L D S+K DFG + + K K +VG+ Y++AP
Sbjct: 129 LEYLHSQNVIHRDIKSDNILLSK---DGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAP 185
Query: 283 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKPWPSIS 340
EV+KRK GP+ D+WS+G++ + G P+ + +F + P + S
Sbjct: 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP--EKWS 243
Query: 341 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
KDF+ K LVKDP R +A + L HP++++ E
Sbjct: 244 PEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA 283
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 2e-42
Identities = 91/293 (31%), Positives = 141/293 (48%), Gaps = 48/293 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
R+ G +G G FG Y A + G+ +AVK+I QD P ++++
Sbjct: 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEI----------RIQDND---PKTIKEIA 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E+K+L+ L H N+VK+Y VYI ME C GG L + +L + V
Sbjct: 48 DEMKVLELLK-HPNLVKYYGVEVHREKVYIFMEYCSGGTL-EELL-----EHGRILDEHV 100
Query: 217 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-----G 267
+R Q+L A H HG+VHRD+KP N + +K DFG + +K G
Sbjct: 101 IRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH---NGVIKLGDFGCAVKLKNNTTTMG 157
Query: 268 KKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDG---I 320
++ Q + G+ Y+APEV+ G +D+WS+G + + G+RP W + ++ +
Sbjct: 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRP-WSELDNEFQIM 216
Query: 321 FKEVLRNKPDFRRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
F +KP P P +S KDF+ + L DP+ R TA++ L HP+V
Sbjct: 217 FHVGAGHKP-----PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 152 bits (387), Expect = 5e-42
Identities = 96/303 (31%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKM-ILPIAVEDV 155
RY GK LG G + Y A DK G VA+KK I++ ++ K I A+
Sbjct: 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKK-------IKLGERKEAKDGINFTAL--- 50
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
RE+K+LQ L H N++ + F + + + E E L++++ K T D
Sbjct: 51 -REIKLLQELK-HPNIIGLLDVFGHKSNINLVFEFMETD--LEKVIKDKSIVLTPADIKS 106
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ LR H + ++HRD+KP N L S D LK DFGL+ F P +K V
Sbjct: 107 YMLMTLRGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSPNRKMTHQV 163
Query: 275 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----GIFKEVL-- 325
+ +Y APE+L R G D+WS+G I + L R PF D IF E L
Sbjct: 164 VTRWYRAPELLFGARHYGVGVDMWSVGCI-FAELLLRVPFLPGDSDIDQLGKIF-EALGT 221
Query: 326 ---RNKPDFRRKP----------------WPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
N P P +P+ S+ A D +++LL +P R+TA QAL
Sbjct: 222 PTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281
Query: 367 HPW 369
HP+
Sbjct: 282 HPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 2e-41
Identities = 90/309 (29%), Positives = 132/309 (42%), Gaps = 61/309 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED-- 154
RY I +G G G + A D+ G+ VA+KK+ + +E
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRR------------------LEGGI 42
Query: 155 ---VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
RE+K LQA H VVK + F + + ME L +L ++ E
Sbjct: 43 PNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEYMPSD--LSEVLRDEERPLPEA 99
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+R +L+ A H +G++HRD+KP N L + D LK DFGL+ +
Sbjct: 100 QVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIADFGLARLFSEEEPRL 156
Query: 272 --DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFK 322
V + +Y APE+L RK P D+W++G I LL G P + D +F+
Sbjct: 157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS-PLFPGENDIEQLAIVFR 215
Query: 323 EV----------LRNKPDF--------RRKPW----PSISNSAKDFVKKLLVKDPRARLT 360
+ L + PD+ + P P S A D +K LLV DP RL+
Sbjct: 216 TLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS 275
Query: 361 AAQALSHPW 369
AA+AL HP+
Sbjct: 276 AAEALRHPY 284
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 146 bits (372), Expect = 5e-40
Identities = 97/300 (32%), Positives = 148/300 (49%), Gaps = 46/300 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K LG G FG Y+A +K G+ VA+KK++K + S+++ M L R
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKK-----KFYSWEEC-MNL--------R 46
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EVK L+ L H N+VK F +++ +Y E E G L + +K ++E ++
Sbjct: 47 EVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYME-GNLYQLMKDRKGKPFSESVIRSII 105
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
Q+L+ A H HG HRD+KPEN L + +K DFGL+ I+ + D V +
Sbjct: 106 YQILQGLAHIHKHGFFHRDLKPENLLVSGPE---VVKIADFGLAREIRSRPPYTDYVSTR 162
Query: 278 YYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL-----RN 327
+Y APE+L R + S D+W++G I L R F +E D ++K VL ++
Sbjct: 163 WYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQD 222
Query: 328 KPD---------FR---------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
P+ FR + P+ S A D +K +L DP+ R TA+QAL HP+
Sbjct: 223 WPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 146 bits (372), Expect = 1e-39
Identities = 98/329 (29%), Positives = 151/329 (45%), Gaps = 70/329 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIAVE 153
RY + K +G G +G A DK G +VA+KKI F DL K IL
Sbjct: 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN--------VFDDLIDAKRIL----- 47
Query: 154 DVKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKKDSRY 208
RE+K+L+ L HEN++ + ED N VYI EL E L +++ K
Sbjct: 48 ---REIKLLRHLR-HENIIGLLDILRPPSPEDFNDVYIVTELMETD--LHKVI-KSPQPL 100
Query: 209 TEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
T+ + Q+LR +LH ++HRD+KP N L + LK DFGL+ + P
Sbjct: 101 TDDHIQYFLYQILR--GLKYLHSANVIHRDLKPSNIL---VNSNCDLKICDFGLARGVDP 155
Query: 267 GKKFQDI----VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------- 312
+ + V + +Y APE+L + D+WS+G I LL R+P
Sbjct: 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPLFPGRDYID 214
Query: 313 -WDK--------TEDGI-------FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLV 352
+ +E+ + + L++ P +KP P S A D ++K+LV
Sbjct: 215 QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLV 274
Query: 353 KDPRARLTAAQALSHPWVREGGDASEIPI 381
DP+ R+TA +AL+HP++ + D + P+
Sbjct: 275 FDPKKRITADEALAHPYLAQLHDPEDEPV 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-39
Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 34/277 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG + K+ A+K ++K I + E + E +IL+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHI-------VETG-----QQEHIFSEKEILE 48
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
H +VK Y F+D Y+Y+ ME C GGEL IL + + E A + ++
Sbjct: 49 ECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGELWT-ILRDRG-LFDEYTARFYIACVVLA 105
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
H G+++RD+KPEN L DS+ +K DFG + +K G+K G+ YVA
Sbjct: 106 FEYLHNRGIIYRDLKPENLLL-----DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVA 160
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPS 338
PE++ K D WS+G++ Y LL GR PF + ED I+ ++L+ +P+
Sbjct: 161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE---FPN 217
Query: 339 -ISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 369
I +AKD +K+LL ++P RL + H W
Sbjct: 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 1e-38
Identities = 88/278 (31%), Positives = 132/278 (47%), Gaps = 32/278 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K + G FG Y+A ++ GD A+K ++K+ MI V +VK E I
Sbjct: 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSD------------MIAKNQVTNVKAERAI 49
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQ 219
+ V K Y +F+ +Y+Y+ ME GG+ L + L + ++ A VV
Sbjct: 50 MMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVV-- 107
Query: 220 MLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+ E LH G++HRD+KPEN L + LK TDFGLS KKF VG+
Sbjct: 108 ---LGVE-DLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLENKKF---VGTP 157
Query: 278 YYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APE + + SD WS+G + + L G PF +T D +F +L + ++ +
Sbjct: 158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVK 217
Query: 337 PSISNSAKDFVKKLLVKDPRARLTA---AQALSHPWVR 371
S A D + +LL DP RL A + SHP+ +
Sbjct: 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK 255
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 2e-38
Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 57/305 (18%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKILIRVVSFQDLKMILPI-AV 152
Y + LG G +G Y A DK G+ VA+KKI E+ I P A+
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGI--------------PSTAL 46
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
RE+ +L+ L H N+VK + + +Y+ E C+ L + L K+ +
Sbjct: 47 ----REISLLKELK-HPNIVKLLDVIHTERKLYLVFEYCD--MDLKKYLDKRPGPLSPNL 99
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
++ Q+LR A CH H ++HRD+KP+N L D LK DFGL+ F P + +
Sbjct: 100 IKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPLRTYT 156
Query: 272 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL- 325
V + +Y APE+L + D+WS+G I ++ G+ F +E D +FK ++L
Sbjct: 157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG 216
Query: 326 -----------------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 364
P F K P + D + K+L +P R++A +A
Sbjct: 217 TPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEA 276
Query: 365 LSHPW 369
L HP+
Sbjct: 277 LKHPY 281
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 142 bits (361), Expect = 8e-38
Identities = 87/305 (28%), Positives = 139/305 (45%), Gaps = 51/305 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + K++G G FG ++ DK G A+K + K+ ++ R I + E
Sbjct: 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR-------NQIAHVRAE--- 51
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
R++ A A +VK Y +F+D+ ++Y+ ME GG+L+ +L +KD + E+ A
Sbjct: 52 RDIL---ADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLM-NLLIRKD-VFPEETARFY 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD--- 272
+ +++ H G +HRD+KP+N L D +K DFGL K +
Sbjct: 107 IAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCKKMNKAKDREYYLND 163
Query: 273 --------------------------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 305
VG+ Y+APEVL+ G E D WS+GVI Y +
Sbjct: 164 SHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEM 223
Query: 306 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA-QA 364
L G PF+ T + +++ K R P P +S A D + +LL DP RL + +
Sbjct: 224 LYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEI 282
Query: 365 LSHPW 369
SHP+
Sbjct: 283 KSHPF 287
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 1e-37
Identities = 94/303 (31%), Positives = 137/303 (45%), Gaps = 52/303 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G G +G Y A DK G+ VA+KKI +R S K L R
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKI-----KLRFESEGIPKTAL--------R 47
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAV 215
E+K+L+ L H N++K + F +Y+ E + L +++ KD + E
Sbjct: 48 EIKLLKELN-HPNIIKLLDVFRHKGDLYLVFEFMD--TDLYKLI--KDRQRGLPESLIKS 102
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ Q+L+ A CH HG++HRD+KPEN L + LK DFGL+ F P + + V
Sbjct: 103 YLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRPYTHYV 159
Query: 275 GSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL---- 325
+ +Y APE+L D+WS+G I LL R F K+E D +FK L
Sbjct: 160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPD 219
Query: 326 ---------------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ P P P+ S A D + ++L DP R+TA QAL+
Sbjct: 220 PEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279
Query: 367 HPW 369
HP+
Sbjct: 280 HPY 282
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 1e-37
Identities = 86/281 (30%), Positives = 148/281 (52%), Gaps = 31/281 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +ATDK+ G +VAVKK++ K R + F EV I++
Sbjct: 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFN---------------EVVIMR 71
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
H N+V+ Y+++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 72 DYQ-HPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKA 127
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQDIVGSAYY 279
+ H G++HRD+K ++ L S D +K +DFG +S + P +K +VG+ Y+
Sbjct: 128 LSFLHAQGVIHRDIKSDSILLTS---DGRVKLSDFGFCAQVSKEV-PRRK--SLVGTPYW 181
Query: 280 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
+APEV+ R G E D+WS+G++ ++ G P++++ K + N P +
Sbjct: 182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNL-HK 240
Query: 339 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+S + F+ ++LV+DP R TAA+ L+HP++ + G S I
Sbjct: 241 VSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPSSI 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 4e-37
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 36/285 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + +++G G Y A N ++VA+K+I+ K +V+++++
Sbjct: 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEK--------------CQTSVDELRK 48
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVV 216
EV+ + H NVVK+Y +F + +++ M GG LLD + + E A V
Sbjct: 49 EVQAMSQCN-HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATV 107
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPG----KKFQ 271
++++L+ H +G +HRD+K N L ED S+K DFG+S + G K +
Sbjct: 108 LKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGGDRTRKVRK 164
Query: 272 DIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNK 328
VG+ ++APEV+++ G ++D+WS G IT I L G P+ + L+N
Sbjct: 165 TFVGTPCWMAPEVMEQVHGYDFKADIWSFG-ITAIELATGAAPYSKYPPMKVLMLTLQND 223
Query: 329 P-----DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
P K + S S + + L KDP R TA + L H
Sbjct: 224 PPSLETGADYKKY---SKSFRKMISLCLQKDPSKRPTAEELLKHK 265
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 6e-37
Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 32/282 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
R+ G+LLG G FG Y + +GD AVK VS D AV+ ++
Sbjct: 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVK----------EVSLADDGQTGQEAVKQLE 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E+ +L L H N+V++ +++ +YI +EL GG L ++L K S + E +
Sbjct: 51 QEIALLSKLQ-HPNIVQYLGTEREEDNLYIFLELVPGGSLA-KLLKKYGS-FPEPVIRLY 107
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
RQ+L H VHRD+K N L + + +K DFG++ + + GS
Sbjct: 108 TRQILLGLEYLHDRNTVHRDIKGANILVDT---NGVVKLADFGMAKQVVEFSFAKSFKGS 164
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFR 332
Y++APEV+ ++ G +D+WS+G T + + +P W + E +FK R
Sbjct: 165 PYWMAPEVIAQQGGYGLAADIWSLGC-TVLEMATGKPPWSQLEGVAAVFKIG-------R 216
Query: 333 RKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K P I S+ AKDF+ K L +DP R TAA+ L HP+V
Sbjct: 217 SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 8e-36
Identities = 89/307 (28%), Positives = 135/307 (43%), Gaps = 55/307 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y + ++G G +G +KA G+ VA+KK +++ +D + + A+
Sbjct: 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKES---------EDDEDVKKTAL---- 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAA 214
REVK+L+ L HEN+V AF +Y+ E E ELL+
Sbjct: 49 REVKVLRQLR-HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRS--- 104
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQD 272
+ Q+L+ A CH H ++HRD+KPEN L E LK DFG + + +P D
Sbjct: 105 -YIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASPLTD 160
Query: 273 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK------- 322
V + +Y APE+L G DVW+IG I LL G F ++ D ++
Sbjct: 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGP 220
Query: 323 ------EVLRNKPDFRRKPWPSI--------------SNSAKDFVKKLLVKDPRARLTAA 362
E+ + P F +P S+ A DF+K L DP+ RLT
Sbjct: 221 LPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD 280
Query: 363 QALSHPW 369
+ L HP+
Sbjct: 281 ELLQHPY 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 2e-35
Identities = 81/296 (27%), Positives = 138/296 (46%), Gaps = 25/296 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+T+ + +G G FG Y A DK VA+K I+ + + + +ED++
Sbjct: 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE------AEDE--------IEDIQ 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E++ L + K+Y +F + ++I ME C GG LD + K + E A +
Sbjct: 48 QEIQFLSQCRS-PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL---KPGKLDETYIAFI 103
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVG 275
+R++L H G +HRD+K N L E+ +K DFG+S + K VG
Sbjct: 104 LREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVSGQLTSTMSKRNTFVG 160
Query: 276 SAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ +++APEV+K+ E +D+WS+G+ L G P D + + +N P
Sbjct: 161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP--SL 218
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
S KDFV L KDP+ R +A + L H ++++ S + + I + +
Sbjct: 219 EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTLLIERIKKWK 274
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 2e-35
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F+ IGK G FG + + A+K + K K + + +V
Sbjct: 2 FELLRVIGK----GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKG------------SVR 45
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+V E +ILQ L H +V + +F+D+ +Y+ ++L GG+L + K +++E+
Sbjct: 46 NVLNERRILQELN-HPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV--KFSEEQV 102
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+ +++ H G++HRD+KP+N L E + TDF ++ + P
Sbjct: 103 KFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLTTST 159
Query: 274 VGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKP 329
G+ Y+APEVL R+ D WS+GV Y L G+RP+ + D I +
Sbjct: 160 SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV 219
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARL--TAAQALSHPW 369
+ + S A D + KLL +DP+ RL +HP+
Sbjct: 220 LY----PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 132 bits (332), Expect = 2e-34
Identities = 92/289 (31%), Positives = 152/289 (52%), Gaps = 26/289 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT K++G VAVKK++ K R + F EV I++
Sbjct: 28 IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFN---------------EVVIMR 72
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV+ YN++ + +++ ME EGG L D + +R E+ A V +L+
Sbjct: 73 DYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLKA 128
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L D +K +DFG + K + + +VG+ Y++AP
Sbjct: 129 LSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP 185
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
E++ R GPE D+WS+G++ ++ G P++++ K + N P + K +S
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSP 244
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
S K F+ +LLV+DP R TAA+ L HP++ + G S I + + N MR
Sbjct: 245 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPSCI-VPLMRQNRMR 292
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 5e-34
Identities = 98/287 (34%), Positives = 141/287 (49%), Gaps = 36/287 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y A K G A K I+ S ++L ED E+ IL
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIE-------SEEEL--------EDFMVEIDIL- 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V Y A+ +N ++I +E C+GG L D I+ + + TE V RQML
Sbjct: 57 SECKHPNIVGLYEAYFYENKLWILIEFCDGGAL-DSIMLELERGLTEPQIRYVCRQMLEA 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-IVGSAYYVAP 282
H H ++HRD+K N L D +K DFG+S K + +D +G+ Y++AP
Sbjct: 116 LNFLHSHKVIHRDLKAGNILLTL---DGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAP 172
Query: 283 EVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVLRNKPDFRRK 334
EV+ K P ++D+WS+G IT I L P + + K +L+++P +
Sbjct: 173 EVVACETFKDNPYDYKADIWSLG-ITLIELAQMEPPHHELNPMRVLLK-ILKSEPPTLDQ 230
Query: 335 P--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
P W S+S DF+K LVKDP R TAA+ L HP+V + D I
Sbjct: 231 PSKW---SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAI 274
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 1e-33
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 41/292 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + +++G G +G Y A K G VA+K ++ + D + E++K
Sbjct: 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---------DEE-------EEIK 50
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLD--RILAKKDSRY 208
E IL+ + H N+ FY AF +D+ +++ MELC GG + D + L KK R
Sbjct: 51 EEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRL 110
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG 267
E+ A ++R+ LR A H + ++HRD+K +N L +++ +K DFG+S
Sbjct: 111 KEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVSAQLDSTL 167
Query: 268 KKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLC-GRRPFWDKTEDGI 320
+ +G+ Y++APEV+ P+ SDVWS+G IT I L G+ P D
Sbjct: 168 GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG-ITAIELADGKPPLCDMHPMRA 226
Query: 321 FKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
++ RN P + P W S DF+ + L+K+ R + L HP++
Sbjct: 227 LFKIPRNPPPTLKSPENW---SKKFNDFISECLIKNYEQRPFMEELLEHPFI 275
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 129 bits (326), Expect = 1e-33
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 52/299 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A +K G+ VA+KKI ++ K PI RE+K+LQ
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKKIR----------MENEKEGFPITA---IREIKLLQ 53
Query: 164 ALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H N+V+ + +Y+ E + L +L + ++TE ++Q+L
Sbjct: 54 KL-RHPNIVRLKEIVTSKGKGSIYMVFEYMDHD--LTGLLDSPEVKFTESQIKCYMKQLL 110
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYY 279
H +G++HRD+K N L + D LK DFGL+ + + V + +Y
Sbjct: 111 EGLQYLHSNGILHRDIKGSNILINN---DGVLKLADFGLARPYTKRNSADYTNRVITLWY 167
Query: 280 VAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV--------- 324
PE+L + GPE D+WS+G I L G+ F TE + IF+
Sbjct: 168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227
Query: 325 -LRNKPDFR----RKPWPS---------ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ P F +KP+ I SA D + KLL DP+ R++A QAL H +
Sbjct: 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G ++A K G+ VA+K+++K ++ + V V E IL
Sbjct: 9 VGQGGYGQVFLAKKKDTGEIVALKRMKK-----SLLFKLN-------EVRHVLTERDIL- 55
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
E +VK AF+DD Y+Y+AME GG+ R L +E A + +M
Sbjct: 56 TTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDF--RTLLNNLGVLSEDHARFYMAEMFEA 113
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 283
H G +HRD+KPENFL + +K TDFGLS I +VGS Y+APE
Sbjct: 114 VDALHELGYIHRDLKPENFLIDA---SGHIKLTDFGLSKGIV--TYANSVVGSPDYMAPE 168
Query: 284 VLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR----KPWPS 338
VL+ + D WS+G + Y LCG PF T + ++ + K +R P +
Sbjct: 169 VLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFN 228
Query: 339 ISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 372
+S+ A D + KL+ DP R + + + +HP+ +E
Sbjct: 229 LSDEAWDLITKLI-NDPSRRFGSLEDIKNHPFFKE 262
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 53/289 (18%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I + LG G +G Y A K G VA+K + + ++++ +
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----------------DLQEIIK 47
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ IL+ +VK+Y ++ + ++I ME C G + D I+ + TE++ A ++
Sbjct: 48 EISILKQ-CDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSD-IMKITNKTLTEEEIAAIL 105
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 276
Q L+ H + +HRD+K N L E+ K DFG+S K ++G+
Sbjct: 106 YQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSGQLTDTMAKRNTVIGT 162
Query: 277 AYYVAPEVLKRKSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR- 332
+++APEV++ + G + D+WS+G IT I + G+ P + R
Sbjct: 163 PFWMAPEVIQ-EIGYNNKADIWSLG-ITAIEMAEGKPP-------------YSDIHPMRA 207
Query: 333 -----RKPWPSISNSAK------DFVKKLLVKDPRARLTAAQALSHPWV 370
KP P++S+ K DFVKK LVKDP R +A Q L HP++
Sbjct: 208 IFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 128 bits (325), Expect = 3e-33
Identities = 92/314 (29%), Positives = 139/314 (44%), Gaps = 71/314 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR---E 158
KLLG G G ++ K G A+K ++K +++ R VKR E
Sbjct: 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR---------------NKVKRVLTE 51
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD----AA 214
+IL L H + Y +F+ + Y+ + M+ C GGEL + + +E+ AA
Sbjct: 52 QEILATL-DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAA 110
Query: 215 VVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------------ 261
V+ +A E HL G+V+RD+KPEN L E + +DF LS
Sbjct: 111 EVL-----LALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSKQSDVEPPPVSK 162
Query: 262 ----------------DFIK--PGKKFQDIVGSAYYVAPEVLKRKSGPESDV--WSIGVI 301
+ P + VG+ Y+APEV+ G S V W++G++
Sbjct: 163 ALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS-GDGHGSAVDWWTLGIL 221
Query: 302 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-- 359
Y +L G PF D F +L+ + F P +S+SA+D ++KLLVKDP RL
Sbjct: 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSP--PVSSSARDLIRKLLVKDPSKRLGS 279
Query: 360 --TAAQALSHPWVR 371
AA+ HP+ R
Sbjct: 280 KRGAAEIKQHPFFR 293
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-32
Identities = 87/278 (31%), Positives = 144/278 (51%), Gaps = 25/278 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +AT+K G +VAVKK++ K R + F EV I++
Sbjct: 30 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---------------EVVIMR 74
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
HENVV YN++ + +++ ME EGG L D + +R E+ A V +LR
Sbjct: 75 DYH-HENVVDMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRA 130
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAP 282
+ H G++HRD+K ++ L S D +K +DFG + K K + +VG+ Y++AP
Sbjct: 131 LSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAP 187
Query: 283 EVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
EV+ R G E D+WS+G++ ++ G P++++ + + N P R K +S+
Sbjct: 188 EVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-RVKDSHKVSS 246
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ F+ +LV++P R TA + L HP+++ G S I
Sbjct: 247 VLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSCI 284
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 3e-32
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 42/289 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D +R T+G G FG ++ D+ + A+K + + V+ +
Sbjct: 2 DLERIKTVGT----GTFGRVHLVRDRISEHYYALKVMA----IPEVIRLKQ--------E 45
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
+ V E ++L+ ++ H +++ + D ++Y+ ME GGEL + R++
Sbjct: 46 QHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG--RFSNST 102
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+++ H +V+RD+KPEN L + +K TDFG + KK +D
Sbjct: 103 GLFYASEIVCALEYLHSKEIVYRDLKPENILLDK---EGHIKLTDFGFA------KKLRD 153
Query: 273 ----IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ G+ Y+APEV++ K D W++G++ Y +L G PF+D GI++++L
Sbjct: 154 RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG 213
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 371
K +F R + AKD +KKLLV D RL A +H W +
Sbjct: 214 KLEFPR----HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 1e-31
Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 38/284 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y + + +G G +G Y A D A G+ VA+K I K+ E ++
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVI---------------KLEPGDDFEIIQ 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E+ +L+ H N+V ++ ++ + ++I ME C GG L D I +E A V
Sbjct: 49 QEISMLKE-CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGPLSELQIAYV 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVG 275
R+ L+ A H G +HRD+K N L ED +K DFG+S + K + +G
Sbjct: 107 CRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIAKRKSFIG 163
Query: 276 SAYYVAPEVL--KRKSGPES--DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330
+ Y++APEV +RK G + D+W++G IT I L + P +D L
Sbjct: 164 TPYWMAPEVAAVERKGGYDGKCDIWALG-ITAIELAELQPPMFDLHP----MRALFLISK 218
Query: 331 FRRKPWPSISNSAK------DFVKKLLVKDPRARLTAAQALSHP 368
P P + + K DF+KK L KDP+ R TA + L HP
Sbjct: 219 SNFPP-PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 6e-31
Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 33/287 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
++ G L+G G FG Y+ + ++G+ +AVK++E + S +D K + ++ +
Sbjct: 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSA---SSKDRKRSM---LDALA 54
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE---LLDRILAKKDSRYTEKDA 213
RE+ +L+ L HEN+V++ + D +++ I +E GG LL+ A + E
Sbjct: 55 REIALLKELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGA-----FEETLV 108
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KP 266
VRQ+L+ H G++HRD+K N L + +K +DFG+S + K
Sbjct: 109 RNFVRQILKGLNYLHNRGIIHRDIKGANILVDN---KGGIKISDFGISKKLEANSLSTKT 165
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEV 324
+ GS +++APEV+K+ S ++D+WS+G + +L G+ PF D T+ IFK
Sbjct: 166 NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG 225
Query: 325 LRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P+ PS IS+ A DF++K D R TAA+ L HP++
Sbjct: 226 ENASPEI-----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 89/310 (28%), Positives = 142/310 (45%), Gaps = 44/310 (14%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR-VVSFQDLKMILPI 150
KDFD + +G+ G FG V +KA GD A+K ++K+ +L + VSF
Sbjct: 1 KDFDVKSLVGR----GHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSF--------- 47
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ E IL +++ + + AF+D + +Y+ ME GG+LL +L + + ++ E
Sbjct: 48 ----FEEERDIL-SISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLS-LLNRYEDQFDE 101
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
A + +++ H G VHRD+KPEN L +K DFG + + K
Sbjct: 102 DMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT---GHIKLADFGSAARLTANKMV 158
Query: 271 QDI--VGSAYYVAPEVL-------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
VG+ Y+APEVL K G E D WS+GVI Y ++ GR PF + T +
Sbjct: 159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY 218
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
++ + + P +S+ D ++ LL + RL HP+ S+I
Sbjct: 219 NNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF------SKID- 270
Query: 382 DISVLNNMRQ 391
NN+R
Sbjct: 271 ----WNNIRN 276
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-30
Identities = 82/277 (29%), Positives = 139/277 (50%), Gaps = 27/277 (9%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
GKLLG G FG Y+ D G +AVK++ + + K V ++ E++
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDP------DSPETKK----EVNALECEIQ 56
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
+L+ L HE +V++Y DD + I ME GG + D++ K TE RQ+
Sbjct: 57 LLKNLQ-HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQL--KAYGALTETVTRKYTRQI 113
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----GKKFQDIVGS 276
L H + +VHRD+K N L SA ++K DFG S ++ G + + G+
Sbjct: 114 LEGVEYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICSSGTGMKSVTGT 170
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRR 333
Y+++PEV+ + G ++DVWS+G T + + +P W + E IFK + +P +
Sbjct: 171 PYWMSPEVISGEGYGRKADVWSVGC-TVVEMLTEKPPWAEFEAMAAIFK--IATQPTNPQ 227
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P +S A++F+++ V++ + R +A + L H +V
Sbjct: 228 LP-SHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 4e-30
Identities = 91/283 (32%), Positives = 133/283 (46%), Gaps = 47/283 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
LG G G + G +AVK I E N+ + K IL RE+ I
Sbjct: 9 LGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ--------KQIL--------RELDI 52
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L +V FY AF ++ + I ME +GG LD+IL + R E+ + +L
Sbjct: 53 LHK-CNSPYIVGFYGAFYNNGDISICMEYMDGGS-LDKILKEVQGRIPERILGKIAVAVL 110
Query: 222 RVAAECH-LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGS 276
+ H H ++HRD+KP N L S + +K DFG+S G+ + VG+
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQ---IKLCDFGVS-----GQLVNSLAKTFVGT 162
Query: 277 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLR---N 327
+ Y+APE R G +SD+WS+G+ L GR P+ + DGIF E+L+ N
Sbjct: 163 SSYMAPE---RIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF-ELLQYIVN 218
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+P R P S +DFV L+KDPR R + + L HP++
Sbjct: 219 EPP-PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 6e-30
Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 32/279 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y ++LG G FG + + V K++ +L + D
Sbjct: 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEV-------------NLTRLSEKERRDAL 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E+ IL L H N++ +YN F DDN + I ME GG L D+I+ +K + E+
Sbjct: 48 NEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWY 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF---QD 272
+ Q++ + H G++HRD+K N FL K +K DFG+S G ++ +
Sbjct: 107 LFQIVSAVSYIHKAGILHRDIKTLNIFLTK----AGLIKLGDFGISK--ILGSEYSMAET 160
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPD 330
+VG+ YY++PE+ + +SD+W++G + Y LL +R F + + K V N
Sbjct: 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN--- 217
Query: 331 FRRKPWPSISNSA-KDFVKKLLVKDPRARLTAAQALSHP 368
P S+ +S V LL +DP R TA + L P
Sbjct: 218 --YTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 8e-30
Identities = 99/330 (30%), Positives = 152/330 (46%), Gaps = 42/330 (12%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
+G+ LG G FG +A K G+ A+K ++K +IL KM V+ V +E
Sbjct: 22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL---------KMK---QVQHVAQEK 69
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
IL L+ H +V +F+D+N VY +E GGEL + +K R+ D A
Sbjct: 70 SILMELS-HPFIVNMMCSFQDENRVYFLLEFVVGGELFTHL--RKAGRFP-NDVAKFYHA 125
Query: 220 MLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
L +A E +LH +++RD+KPEN L + +K TDFG + + P + F + G+
Sbjct: 126 ELVLAFE-YLHSKDIIYRDLKPENLLLDN---KGHVKVTDFGFAKKV-PDRTFT-LCGTP 179
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APEV++ K G D W++GV+ Y + G PF+D T I++++L + F W
Sbjct: 180 EYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W 237
Query: 337 PSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG--------GDASEIPIDI 383
A+D VK LL D RL A +HP+ + IP+ +
Sbjct: 238 --FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRV 295
Query: 384 SVLNNMRQFVKYSRLKQFALRALASTLDDE 413
+ F KY L L + E
Sbjct: 296 KSPGDTSNFEKYPDSPVDRLPPLTAAQQAE 325
|
Length = 329 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 117 bits (296), Expect = 1e-29
Identities = 81/283 (28%), Positives = 139/283 (49%), Gaps = 33/283 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + +G G FG K++G + K+I+ + + ++ + ++
Sbjct: 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-----TEKEKQQLV--------S 48
Query: 158 EVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAA 214
EV IL+ L H N+V++Y+ D + +YI ME CEGG+L I KK+ +Y E++
Sbjct: 49 EVNILRELK-HPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFI 107
Query: 215 V-VVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
++ Q+L ECH + ++HRD+KP N +F A ++K DFGL+ +
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPAN-IFLDANN--NVKLGDFGLAKILGHDS 164
Query: 269 KF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
F + VG+ YY++PE L +SD+WS+G + Y L PF + + + ++
Sbjct: 165 SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE 224
Query: 327 NKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHP 368
K FRR P S+ + +K +L DP R + + L P
Sbjct: 225 GK--FRR--IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 1e-29
Identities = 81/273 (29%), Positives = 140/273 (51%), Gaps = 25/273 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G G +A +K +G +VAVK ++ K R + F EV I++
Sbjct: 29 IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFN---------------EVVIMR 73
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
H+NVV+ Y ++ +++ ME +GG L D + +R E+ A V +L+
Sbjct: 74 DYQ-HQNVVEMYKSYLVGEELWVLMEFLQGGALTDIV---SQTRLNEEQIATVCESVLQA 129
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAP 282
H G++HRD+K ++ L D +K +DFG I K K + +VG+ Y++AP
Sbjct: 130 LCYLHSQGVIHRDIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP 186
Query: 283 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341
EV+ R G E D+WS+G++ ++ G P++ + K LR+ P + K IS
Sbjct: 187 EVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNAHKISP 245
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374
+DF++++L ++P+ R TA + L HP++ + G
Sbjct: 246 VLRDFLERMLTREPQERATAQELLDHPFLLQTG 278
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 1e-29
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 28/279 (10%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
DF+ IGK G FG + KA+ A+K+I DL +
Sbjct: 1 DFEILNKIGK----GSFGVVFKVVRKADKRVYAMKQI-------------DLSKMNRRER 43
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E+ E ++L L ++++Y +F D + I ME E G+L + ++ E
Sbjct: 44 EEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQ 102
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-Q 271
Q+L A H ++HRD+K N ++K D G++ + F
Sbjct: 103 VWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTNFAN 159
Query: 272 DIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
IVG+ YY++PE+ + K E SDVW++GV+ Y G+ PF + + +++R
Sbjct: 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG--- 216
Query: 331 FRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
P S + + L KD R R Q L +P
Sbjct: 217 -VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-29
Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 27/282 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA+K++ Q K L I
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---------QQPKKELIINE 66
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K H N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 67 ILVMRENK-------HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 116
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 117 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 173
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKP 329
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ ++ P
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + +S +DF+ + L D R +A + L HP+++
Sbjct: 234 ELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 81/284 (28%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
G+L+G G +G Y+A + G+ +AVK++E + + + V+ ++ E++
Sbjct: 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAG----RHDSRQKDM-VKALRSEIE 60
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
L+ L H N+V++ + Y+ I +E GG + L + R+ E+ Q+
Sbjct: 61 TLKDLD-HLNIVQYLGFETTEEYLSIFLEYVPGGS-IGSCL-RTYGRFEEQLVRFFTEQV 117
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV------ 274
L A H G++HRD+K +N L + D K +DFG+S KK DI
Sbjct: 118 LEGLAYLHSKGILHRDLKADNLLVDA---DGICKISDFGIS------KKSDDIYDNDQNM 168
Query: 275 ---GSAYYVAPEVLKRKSGPES---DVWSIGVITYILLCGRRPFWDKTE--DGIFK-EVL 325
GS +++APEV+ S S D+WS+G + + GRRP W E +FK
Sbjct: 169 SMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WSDEEAIAAMFKLGNK 227
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
R+ P ++S A DF+ +P R TA + L HP+
Sbjct: 228 RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 58/325 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ RY +G G +G A D G +VA+KK L R FQ I
Sbjct: 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKK------LSR--PFQS-----AIHA 58
Query: 153 EDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDS 206
+ RE+++L+ + HENV+ + F ED VY+ L G L+ I+ K
Sbjct: 59 KRTYRELRLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHLM--GADLNNIV--KCQ 113
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+ ++ +V Q+LR H G++HRD+KP N + ED LK DFGL+
Sbjct: 114 KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKILDFGLAR--HT 168
Query: 267 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR--------------- 309
+ V + +Y APE++ D+WS+G I LL G+
Sbjct: 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRI 228
Query: 310 --------RPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRA 357
K + +++ P +K + + + A D ++K+LV DP
Sbjct: 229 MNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDK 288
Query: 358 RLTAAQALSHPWVREGGDASEIPID 382
R+TAA+AL+HP++ E D + P+
Sbjct: 289 RITAAEALAHPYLAEYHDPEDEPVA 313
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 36/277 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G +G ++ D K+ K+L + Q K E + E ++
Sbjct: 6 RVLGTGAYGKVFLVRKVGGHDA---GKLYAMKVLKKATIVQKAK-----TAEHTRTERQV 57
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+A+ +V + AF+ D +++ ++ GGEL + ++ +TE + V + ++
Sbjct: 58 LEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEI- 114
Query: 222 RVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSA 277
V A HLH G+++RD+K EN L S + + TDFGLS ++ + G+
Sbjct: 115 -VLALDHLHQLGIIYRDIKLENILLDS---EGHVVLTDFGLSKEFLAEEEERAYSFCGTI 170
Query: 278 YYVAPEVLKRKSGPESDV---WSIGVITYILLCGRRPFWDKTEDG-------IFKEVLRN 327
Y+APEV++ SG WS+GV+T+ LL G PF T DG I + +L++
Sbjct: 171 EYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPF---TVDGEQNSQSEISRRILKS 227
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 364
KP F ++S A+DF++KLL KDP+ RL A A
Sbjct: 228 KPPFP----KTMSAEARDFIQKLLEKDPKKRLGANGA 260
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 95/336 (28%), Positives = 140/336 (41%), Gaps = 91/336 (27%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
DK R+Y I + LG G +G + A D+ + VA+KKI +F++
Sbjct: 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFD--------AFRN------- 46
Query: 151 AVEDVK---REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKD 205
D + RE+ LQ L H N+VK N E+D +Y+ E
Sbjct: 47 -ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFE---------------- 89
Query: 206 SRYTEKDAAVVVR--------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251
Y E D V+R Q+L+ H ++HRD+KP N L S D
Sbjct: 90 --YMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS---DC 144
Query: 252 SLKATDFGLSDFIKPGKKFQ------DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITY 303
+K DFGL+ + ++ D V + +Y APE+L + D+WS+G I
Sbjct: 145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG 204
Query: 304 ILLCGRRPF----------------WDKTEDGI------FKE-VLRNKPDFRRKP----W 336
+L G+ F + + I F +L + P RKP
Sbjct: 205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL 264
Query: 337 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
P S+ A D +KKLLV +P RLTA +AL HP+V +
Sbjct: 265 PKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 4e-28
Identities = 102/328 (31%), Positives = 150/328 (45%), Gaps = 61/328 (18%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
FG + RY + +G G FG A D+ G VA+KKI K
Sbjct: 2 FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK-------------PFS 48
Query: 148 LPIAVEDVKREVKILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAK 203
P+ + RE+K+L+ L HEN++ F + ED +Y EL G L R+L
Sbjct: 49 TPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLED---IYFVTELL--GTDLHRLL-- 100
Query: 204 KDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
SR EK + Q+LR H G+VHRD+KP N L E+ LK DFGL+
Sbjct: 101 -TSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLAR 156
Query: 263 FIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDK---TE 317
P + V + YY APE++ +K E D+WS G I +L G+ F K +
Sbjct: 157 IQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ 214
Query: 318 DGIFKEVLRNKPDF------------------RRKPWP------SISNSAKDFVKKLLVK 353
I ++L PD +R+P P + SA D ++K+LV
Sbjct: 215 FSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVF 274
Query: 354 DPRARLTAAQALSHPWVREGGDASEIPI 381
DP+ R++AA+AL+HP++ D ++ P+
Sbjct: 275 DPQKRISAAEALAHPYLAPYHDPTDEPV 302
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 7e-28
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 27/279 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +L+G G +G Y G VA+K +I + + D V D++R
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALK-------IINLDTPDD-------DVSDIQR 48
Query: 158 EVKILQAL--AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
EV +L L + N+ K+Y ++ ++I ME EGG + R L K EK +V
Sbjct: 49 EVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKA-GPIAEKYISV 105
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
++R++L H G++HRD+K N L + ++K DFG++ + K V
Sbjct: 106 IIREVLVALKYIHKVGVIHRDIKAANILVTNT---GNVKLCDFGVAALLNQNSSKRSTFV 162
Query: 275 GSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
G+ Y++APEV+ + ++D+WS+G+ Y + G P+ D + ++KP
Sbjct: 163 GTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPP-- 220
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
R S ++FV L ++P+ RL+A + L W++
Sbjct: 221 RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIK 259
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (281), Expect = 2e-27
Identities = 84/306 (27%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +G G +G Y A D G VA+KK+ RV ++ +P++ R
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKV-------RVPLSEEG---IPLST---LR 47
Query: 158 EVKILQAL--AGHENVVKFYNAF---EDDNY--VYIAMELCEG--GELLDRILAKKDSRY 208
E+ +L+ L H N+V+ + D + + E + L +
Sbjct: 48 EIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPE 107
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T KD ++RQ+LR H H +VHRD+KP+N L S D +K DFGL+
Sbjct: 108 TIKD---LMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---DGQVKIADFGLARIYSFEM 161
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF- 321
+V + +Y APEVL + S D+WS+G I L RRP + T + IF
Sbjct: 162 ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTSEADQLDKIFD 220
Query: 322 -----------KEVLRNKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQ 363
+ V + F P I D +KK+L +P R++A +
Sbjct: 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFE 280
Query: 364 ALSHPW 369
AL HP+
Sbjct: 281 ALQHPY 286
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 77/278 (27%), Positives = 128/278 (46%), Gaps = 26/278 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ I K +G GQF Y A +G VA+KK+ Q +M+ A +D
Sbjct: 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKV------------QIFEMMDAKARQDC 49
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDA 213
+E+ +L+ L H NV+K+ +F ++N + I +EL + G+L I K+ E+
Sbjct: 50 LKEIDLLKQL-DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTI 108
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QD 272
Q+ H ++HRD+KP N +F +A +K D GL F
Sbjct: 109 WKYFVQLCSALEHMHSKRIMHRDIKPAN-VFITA--TGVVKLGDLGLGRFFSSKTTAAHS 165
Query: 273 IVGSAYYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFW-DKTE-DGIFKEVLRNK 328
+VG+ YY++PE + ++G SD+WS+G + Y + + PF+ DK + K++ K
Sbjct: 166 LVGTPYYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EK 222
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
D+ P S +D V + + DP R + L
Sbjct: 223 CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 36/282 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G FG +A K + AVK ++K+ IL QD VE E ++
Sbjct: 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL------QDDD------VECTMTEKRV 48
Query: 162 LQALAG-HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA---AVVV 217
L ALAG H + + ++ F+ + ++ ME GG+L+ I + R+ E A A +
Sbjct: 49 L-ALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEI 105
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 276
L+ H G+++RD+K +N L S + +K DFG+ + I G G+
Sbjct: 106 VLGLQF---LHERGIIYRDLKLDNVLLDS---EGHIKIADFGMCKEGILGGVTTSTFCGT 159
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+APE+L + GP D W++GV+ Y +L G+ PF ED +F+ +L ++ + R
Sbjct: 160 PDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR-- 217
Query: 336 WPSISNSAKDFVKKLLVKDPRARL----TAAQAL-SHPWVRE 372
+S AK +K L K+P RL T Q + HP+ RE
Sbjct: 218 --WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 4e-27
Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 58/299 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
DF+ TI KL+ +G +G Y+ K R A+KKI K +++R +
Sbjct: 2 DFE---TI-KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRN------------QI 45
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE---LLDRI--LAKKDSR 207
+ V E IL A + VV + +FE ++ + ME EGG+ LL I L +R
Sbjct: 46 QQVFVERDIL-TFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMAR 104
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---- 263
+ + + + H +G+VHRD+KP+N L S +K TDFGLS
Sbjct: 105 MYFAETVLALEYL-------HNYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKIGLMS 154
Query: 264 ----------IKPGKKFQD--IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 310
K ++F D + G+ Y+APEV+ R+ G D W++G+I Y L G
Sbjct: 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCV 214
Query: 311 PFWDKTEDGIFKEVLRNKPDFRRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQAL 365
PF+ T + +F +V+ + + WP ++ A+D + +LL ++P RL A
Sbjct: 215 PFFGDTPEELFGQVISDDIE-----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAF 268
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 5e-27
Identities = 79/253 (31%), Positives = 117/253 (46%), Gaps = 31/253 (12%)
Query: 157 REVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRI---LAKKDSRYTEK 211
RE++I ++ +VK+Y AF E + + IAME CEGG L D I + K+ R EK
Sbjct: 48 RELEINKSCK-SPYIVKYYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEK 105
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 270
+ +L+ + H ++HRD+KP N L +K DFG+S + +
Sbjct: 106 VLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGVSGELVNSLAG- 161
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLR-- 326
G+++Y+APE ++ K SDVWS+G+ + R PF + E+L
Sbjct: 162 -TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYI 220
Query: 327 -NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
N P+ K P S KDF+K+ L KDP R T L HPW++ A
Sbjct: 221 VNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK----AQMKKK 276
Query: 382 DISVLNNMRQFVK 394
NM +FV
Sbjct: 277 -----VNMAKFVA 284
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 5e-27
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 29/279 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG +A K +G AVK ++K+ IL QD VE E +I
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL------QDDD------VECTMTEKRI 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H + + Y F+ + ++ ME GG+L+ I +K R+ E A ++
Sbjct: 49 LSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIT 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H G+++RD+K +N L + K DFG+ + I GK G+ Y+
Sbjct: 107 SALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYI 163
Query: 281 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APE+L+ GP D W++GV+ Y +LCG PF + ED +F+ +L ++ + W +
Sbjct: 164 APEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW--L 219
Query: 340 SNSAKDFVKKLLVKDPRARLTA------AQALSHPWVRE 372
S A D +K + K+P RL + L HP+ +E
Sbjct: 220 SQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 6e-27
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 59/242 (24%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
T+GK LG G FG VAVK ++++ S Q ++ L
Sbjct: 2 TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA------SEQQIEEFL------ 49
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
RE +I++ L H NVVK ++ +YI ME EGG+LL + +
Sbjct: 50 --REARIMRKL-DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRP--------K 98
Query: 215 VVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + +L A + +L +HRD+ N L E+ +K +DFGLS +
Sbjct: 99 LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDD 155
Query: 268 KKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 314
YY APE LK K +SDVWS GV+ + I G +P+
Sbjct: 156 D---------YYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPG 206
Query: 315 KT 316
+
Sbjct: 207 MS 208
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 7e-27
Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 66/330 (20%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKILIRVVSFQDLKMILP 149
D RY +G G +G AT K G +VA+KKI E R +
Sbjct: 2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTL---------- 51
Query: 150 IAVEDVKREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKK 204
RE+KIL+ HEN++ + +FE N VYI EL E L +++ K
Sbjct: 52 -------REIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMETD--LYKLI--K 99
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
+ + Q+LR H ++HRD+KP N L + LK DFGL+
Sbjct: 100 TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN---CDLKICDFGLARIA 156
Query: 265 KP----GKKFQDIVGSAYYVAPEV-LKRKSGPES-DVWSIGVITYILLCGRRPFWDK--- 315
P + V + +Y APE+ L K ++ D+WS+G I +L R F K
Sbjct: 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216
Query: 316 -------------TEDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLL 351
+++ + + +++ P + PW P+ A D + K+L
Sbjct: 217 HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKML 276
Query: 352 VKDPRARLTAAQALSHPWVREGGDASEIPI 381
+P R+T +AL+HP++ + D S+ P+
Sbjct: 277 TFNPHKRITVEEALAHPYLEQYHDPSDEPV 306
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 110 bits (275), Expect = 7e-27
Identities = 87/278 (31%), Positives = 131/278 (47%), Gaps = 32/278 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y A +K G A K IE S ++L ED E++IL
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETK-------SEEEL--------EDYMVEIEIL- 63
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
A H +VK AF D ++I +E C GG + D I+ + D TE V+ RQML
Sbjct: 64 ATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVICRQMLEA 122
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
H ++HRD+K N L D +K DFG+S +K ++ +G+ Y++AP
Sbjct: 123 LQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAP 179
Query: 283 EVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP- 335
EV+ K P ++D+WS+G+ + P + + ++ +++P +P
Sbjct: 180 EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPS 239
Query: 336 -WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
W S +DF+K L K P R +AAQ L HP+V
Sbjct: 240 KW---SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 9e-27
Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 27/274 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y + +++G G FG + + + A+K+I K S VED +
Sbjct: 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK------SSSA--------VEDSR 46
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E +L A H N+V F +FE D ++YI ME C+GG+L+ +I ++ + E
Sbjct: 47 KEA-VLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQW 105
Query: 217 VRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIV 274
QM H ++HRD+K +N FL ++ K +K DFG + + PG V
Sbjct: 106 FVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK----VKLGDFGSARLLTSPGAYACTYV 161
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ YYV PE+ + +SD+WS+G I Y L + PF + +K ++
Sbjct: 162 GTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPF----QANSWKNLILKVCQGSY 217
Query: 334 KPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALS 366
KP PS S + +K++ ++PR+R +A LS
Sbjct: 218 KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 9e-27
Identities = 83/293 (28%), Positives = 136/293 (46%), Gaps = 41/293 (13%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
D ++ +T + +GHG FG Y A D + VA+KK+ S+ +
Sbjct: 9 SKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKM----------SYSGKQ---- 54
Query: 150 IAVE---DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG--GELLDRILAKK 204
+ E D+ +EV+ LQ L H N +++ + ++ ++ ME C G ++L+ + KK
Sbjct: 55 -SNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKK 110
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
+ E + A + L+ A H H +HRD+K N L E ++K DFG + +
Sbjct: 111 PLQ--EVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLV 165
Query: 265 KPGKKFQDIVGSAYYVAPEV-LKRKSGP---ESDVWSIGVITYILLCGRRP--FWDKTED 318
P F VG+ Y++APEV L G + DVWS+G IT I L R+P F
Sbjct: 166 SPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMS 221
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
++ + P W S+ ++FV L K P+ R ++ + L H +V
Sbjct: 222 ALYHIAQNDSPTLSSNDW---SDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 81/281 (28%), Positives = 140/281 (49%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G + A D A G VA+K+I K Q K
Sbjct: 16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--------QPKK------- 60
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E + E+ +++ L + N+V F ++F + +++ ME GG L D + ++ E
Sbjct: 61 ELIINEILVMKELK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV---TETCMDEAQ 116
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 117 IAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM---DGSVKLTDFGFCAQITPEQSKRS 173
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + L HP+++
Sbjct: 234 ELQNP-EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-26
Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 68/305 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK----REV 159
+G G +G Y A DK G+ VA+KKI L E V RE+
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIR-----------------LETEDEGVPSTAIREI 49
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRY-TEKDAAVV- 216
+L+ L H N+V+ + +N +Y+ E LD L K DS T D ++
Sbjct: 50 SLLKELN-HPNIVRLLDVVHSENKLYLVFEF------LDLDLKKYMDSSPLTGLDPPLIK 102
Query: 217 --VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDI 273
+ Q+L+ A CH H ++HRD+KP+N L + +LK DFGL+ F P + +
Sbjct: 103 SYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRTYTHE 159
Query: 274 VGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL- 325
V + +Y APE+L ++ S P D+WSIG I + + RRP + D D +F+ L
Sbjct: 160 VVTLWYRAPEILLGSRQYSTP-VDIWSIGCI-FAEMVNRRPLFPGDSEIDQLFRIFRTLG 217
Query: 326 ----------RNKPDF-------RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 364
+ PD+ R+ P++ D + K+LV DP R++A A
Sbjct: 218 TPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAA 277
Query: 365 LSHPW 369
L HP+
Sbjct: 278 LQHPY 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-26
Identities = 89/329 (27%), Positives = 139/329 (42%), Gaps = 67/329 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEK---NKILIRVVSFQDLKMILPIA 151
RY + K LG G +G A + + + VA+KKI KIL K L
Sbjct: 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKIL--------AKRAL--- 49
Query: 152 VEDVKREVKILQALAGHENVVKFY---NAFEDD-NYVYIAMELCEGGELLDRILAKKDSR 207
RE+K+L+ GH+N+ Y F + N +Y+ EL E L +I+ +
Sbjct: 50 -----RELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEAD--LHQII-RSGQP 101
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T+ + Q+L H ++HRD+KP N L + D LK DFGL+
Sbjct: 102 LTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA---DCELKICDFGLARGFSEN 158
Query: 268 KKFQD-----IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD------ 314
V + +Y APE++ DVWS+G I LL GR+P +
Sbjct: 159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGKDYVD 217
Query: 315 -----------KTEDGIFK-------EVLRNKPDFRRKPWPSI----SNSAKDFVKKLLV 352
E+ + + +R+ P+ +KP+ SI + A D ++KLL
Sbjct: 218 QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLA 277
Query: 353 KDPRARLTAAQALSHPWVREGGDASEIPI 381
DP R++ +AL HP++ D + P+
Sbjct: 278 FDPTKRISVEEALEHPYLAIWHDPDDEPV 306
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 5e-26
Identities = 80/280 (28%), Positives = 131/280 (46%), Gaps = 35/280 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR---E 158
KLLG G FG + +KA G A+K ++K I IA ++V E
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI---------------IAKDEVAHTLTE 45
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++LQ H + +F+ + + ME GGEL + ++ ++E A
Sbjct: 46 SRVLQN-TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGA 102
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 277
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 103 EIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 159
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT-- 217
Query: 337 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 371
+S AK + LL KDP+ RL A + + H +
Sbjct: 218 --LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFA 255
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 5e-26
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 58/242 (23%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
T+GK LG G FG T VAVK ++++ S Q ++ L
Sbjct: 2 TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDA------SEQQIEEFL------ 49
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
RE +I++ L H N+VK ++ + I ME GG+LLD + + +
Sbjct: 50 --REARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELS----- 101
Query: 215 VVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ +L A + +L +HRD+ N L E+ +K +DFGLS +
Sbjct: 102 --LSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDD 156
Query: 268 KKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 314
YY APE LK K +SDVWS GV+ + I G P+
Sbjct: 157 D---------YYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPG 207
Query: 315 KT 316
+
Sbjct: 208 MS 209
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 5e-26
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 25/278 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I K +G G FG Y+A K++ + +K+I+ K+ ++ E K
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVK-------------EKEASK 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+EV IL A H N+V F+ +F+++ ++I ME C+GG+L+ RI ++ ++E
Sbjct: 48 KEV-ILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSW 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIV 274
Q+ H ++HRD+K +N FL K+ K DFG++ + + V
Sbjct: 107 FVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM---VAKLGDFGIARQLNDSMELAYTCV 163
Query: 275 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ YY++PE+ + R ++D+WS+G + Y L + PF E +++
Sbjct: 164 GTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPF----EGNNLHQLVLKICQGYF 219
Query: 334 KPW-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P P+ S + + +L PR R + L P++
Sbjct: 220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 1e-25
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 36/287 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ + +L+G+G +G Y G A+K ++ V ++ E++K+
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-------VTGDEE---------EEIKQ 51
Query: 158 EVKILQALAGHENVVKFYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E+ +L+ + H N+ +Y AF D+ +++ ME C G + D I K + E+
Sbjct: 52 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 111
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKF 270
A + R++LR + H H ++HRD+K +N L E++ +K DFG+S + +
Sbjct: 112 WIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRR 168
Query: 271 QDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+G+ Y++APEV+ P+ SD+WS+G+ + G P D +
Sbjct: 169 NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228
Query: 325 LRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
RN P + K W S + F++ LVK+ R T Q + HP++
Sbjct: 229 PRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 83/298 (27%), Positives = 134/298 (44%), Gaps = 56/298 (18%)
Query: 107 GQFGYTYVATDKANGDRVAVKKI--EKNKILIRVVSFQDLKMILPIAVEDVKREVKILQA 164
G +G Y A DK G+ VA+KK+ EK K + S RE+ IL
Sbjct: 16 GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSL---------------REINILLK 60
Query: 165 LAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
L H N+V + + +Y+ ME E +L ++ + + + ++ Q+L
Sbjct: 61 L-QHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKS-LMETMKQPFLQSEVKCLMLQLLS 117
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 281
A H + ++HRD+K N L + LK DFGL+ ++ P K + +V + +Y A
Sbjct: 118 GVAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVVTLWYRA 174
Query: 282 PEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----LRNKPDF 331
PE+L ++ D+WS+G I LL + F K+E + IFK + + P F
Sbjct: 175 PELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGF 234
Query: 332 -------------------RRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
R+K P S+S++ D + +LL DP R++A AL HP+
Sbjct: 235 SELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 2e-25
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 56/308 (18%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
++ + K+ G G +G + ++ G VA+KK V +D +I IA+
Sbjct: 1 EKYEKLSKI-GEGSYGVVFKCRNRETGQIVAIKKF---------VESEDDPVIKKIAL-- 48
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKD 212
RE+++L+ L H N+V F +++ E C+ L L++ +K
Sbjct: 49 --REIRMLKQLK-HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKK- 104
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 271
++ Q L+ CH H +HRD+KPEN L + +K DFG + + PG +
Sbjct: 105 ---IIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDYT 158
Query: 272 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----------- 318
D V + +Y APE+L + GP DVW+IG + LL G +P W D
Sbjct: 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYLIRKTL 217
Query: 319 GIF----KEVLRNKPDFR---------RKP----WPSISNSAKDFVKKLLVKDPRARLTA 361
G +++ F+ R+P +P+IS+ A F+K L DP RL+
Sbjct: 218 GDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSC 277
Query: 362 AQALSHPW 369
+ L HP+
Sbjct: 278 EELLEHPY 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 81/281 (28%), Positives = 137/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA+K++ Q K L I
Sbjct: 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ---------QQPKKELIINE 66
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 67 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 116
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 117 IAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 173
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + L HP+++
Sbjct: 234 ELQNP-ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 3e-25
Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + LG G FG Y K NG + K +I + +F K ++ D+
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALK----EINVHNPAFGKDKRERDKSIGDIVS 57
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAV 215
EV I++ H N+V++Y F +++ +YI M+L EG L + L +K R+TE+
Sbjct: 58 EVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWN 117
Query: 216 VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
+ QM V A +LH +VHRD+ P N + ED + TDFGL+ +P K
Sbjct: 118 IFVQM--VLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDFGLAKQKQPESKLTS 172
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 313
+VG+ Y PE++K + G ++DVW+ G I Y + + PF+
Sbjct: 173 VVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 6e-25
Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 30/280 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G FG +A K + A+K ++K+ IL QD V+ E +I
Sbjct: 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL------QDDD------VDCTMTEKRI 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A H + + F+ + ++ ME GG+L+ +I ++ ++ E + ++
Sbjct: 49 LALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQI--QRSRKFDEPRSRFYAAEVT 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H HG+++RD+K +N L + + K DFG+ + I G G+ Y+
Sbjct: 107 LALMFLHRHGVIYRDLKLDNILLDA---EGHCKLADFGMCKEGILNGVTTTTFCGTPDYI 163
Query: 281 APEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APE+L+ + GP D W++GV+ Y ++ G+ PF ED +F+ +L + D W +
Sbjct: 164 APEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLYPVW--L 219
Query: 340 SNSAKDFVKKLLVKDPRARL--TAAQALS-----HPWVRE 372
S A +K + K+P RL A+Q HP+ +E
Sbjct: 220 SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 7e-25
Identities = 86/276 (31%), Positives = 134/276 (48%), Gaps = 32/276 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG Y A +K G A K I+ S ++L ED E+ IL
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTK-------SEEEL--------EDYMVEIDIL- 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
A H N+VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L
Sbjct: 57 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEA 115
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 282
H + ++HRD+K N LF D +K DFG+S + ++ +G+ Y++AP
Sbjct: 116 LNYLHENKIIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 172
Query: 283 EVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP- 335
EV+ K P ++DVWS+G+ + P + + ++ +++P +P
Sbjct: 173 EVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPS 232
Query: 336 -WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
W S+ KDF+KK L K+ AR T Q L HP+V
Sbjct: 233 RW---SSEFKDFLKKCLEKNVDARWTTTQLLQHPFV 265
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 9e-25
Identities = 93/329 (28%), Positives = 144/329 (43%), Gaps = 69/329 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKILIRVVSFQDLKMILPIA 151
D +Y K +G G +G A + ++VA+KKI N+I D K L
Sbjct: 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI--------DAKRTL--- 52
Query: 152 VEDVKREVKILQALAGHENVVKF--------YNAFEDDNYVYIAMELCEGGELLDRILAK 203
RE+K+L+ L HENV+ AF D VYI EL + L +I+ +
Sbjct: 53 -----REIKLLRHLD-HENVIAIKDIMPPPHREAFND---VYIVYELMDTD--LHQII-R 100
Query: 204 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
++ + Q+LR H ++HRD+KP N L + + LK DFGL+
Sbjct: 101 SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLART 157
Query: 264 IKPGKKFQ-DIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFW------- 313
F + V + +Y APE+L S DVWS+G I LL GR+P +
Sbjct: 158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL-GRKPLFPGKDYVH 216
Query: 314 ------------DKTEDGIF-----KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLV 352
+ + G + +R+ P R+ +P + A D ++K+LV
Sbjct: 217 QLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLV 276
Query: 353 KDPRARLTAAQALSHPWVREGGDASEIPI 381
DP R+T +AL+HP++ D S+ P+
Sbjct: 277 FDPSKRITVEEALAHPYLASLHDPSDEPV 305
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 9e-25
Identities = 84/304 (27%), Positives = 142/304 (46%), Gaps = 38/304 (12%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
GK F D + I + +G G +G + +K NG + AVK ++
Sbjct: 5 GKTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILD---------PIH 55
Query: 143 DLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELL 197
D+ E+++ E IL+AL+ H NVVKFY + ++ + +++ +ELC GG +
Sbjct: 56 DID-------EEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVT 108
Query: 198 DRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255
D + K+ R E A ++ + L H++ +HRD+K N L + + +K
Sbjct: 109 DLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT---EGGVKL 165
Query: 256 TDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCG 308
DFG+S + + ++ VG+ +++APEV+ + +S DVWS+G+ L G
Sbjct: 166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDG 225
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
P D ++ RN P +P W SN DF++K L KD R T + L
Sbjct: 226 DPPLADLHPMRALFKIPRNPPPTLHQPELW---SNEFNDFIRKCLTKDYEKRPTVSDLLQ 282
Query: 367 HPWV 370
H ++
Sbjct: 283 HVFI 286
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 1e-24
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 30/282 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ +GKLLG G FG Y+ D G +AVK+++ F V ++
Sbjct: 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQ----------FDPESPETSKEVNALEC 53
Query: 158 EVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+++L+ L HE +V++Y D + + I ME GG + D++ K TE
Sbjct: 54 EIQLLKNLL-HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQL--KSYGALTENVTRK 110
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQ 271
RQ+L + H + +VHRD+K N L S ++K DFG S ++ G +
Sbjct: 111 YTRQILEGVSYLHSNMIVHRDIKGANILRDSV---GNVKLGDFGASKRLQTICLSGTGMK 167
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 328
+ G+ Y+++PEV+ + G ++D+WS+G T + + +P W + E IFK + +
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADIWSVGC-TVVEMLTEKPPWAEFEAMAAIFK--IATQ 224
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P P P +S+ +DF+K++ V + + R +A + L H +V
Sbjct: 225 PTNPVLP-PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 1e-24
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 62/313 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG + K G A+KK+ K++ M+ V V+ E I
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE------------MLEKEQVAHVRAERDI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A A + VVK Y +F+D+NY+Y+ ME GG+++ +L KKD+ +TE++ + + +
Sbjct: 55 L-AEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMT-LLMKKDT-FTEEETRFYIAETI 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---------SDF------IKP 266
H G +HRD+KP+N L + +K +DFGL ++F P
Sbjct: 112 LAIDSIHKLGYIHRDIKPDNLLLDA---KGHIKLSDFGLCTGLKKSHRTEFYRILSHALP 168
Query: 267 GKKFQDI------------------------VGSAYYVAPEVLKRKS-GPESDVWSIGVI 301
I VG+ Y+APEV + E D WS+GVI
Sbjct: 169 SNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVI 228
Query: 302 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 361
Y +L G PF +++++ K + +S AKD +K+L + RL
Sbjct: 229 MYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN 287
Query: 362 AQA---LSHPWVR 371
SHP+ +
Sbjct: 288 NGVNEIKSHPFFK 300
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-24
Identities = 79/281 (28%), Positives = 136/281 (48%), Gaps = 25/281 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ Q K L I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---------QQPKKELIINE 67
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V RE K + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 68 ILVMRENK-------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 174
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P +S +DF+ + L D R +A + L H +++
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 2e-24
Identities = 91/335 (27%), Positives = 134/335 (40%), Gaps = 81/335 (24%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKM 146
+F + + + + K+ G G FG + A K VA+KK+ + K
Sbjct: 4 EFPFCDEVSKYEKLAKI-GQGTFGEVFKARHKKTKQIVALKKVLME----------NEKE 52
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKF----------YNAFEDDNYVYIAMELCEGGEL 196
PI RE+KILQ L HENVV YN ++ Y+ E CE
Sbjct: 53 GFPITA---LREIKILQLLK-HENVVNLIEICRTKATPYNRYKGS--FYLVFEFCEHD-- 104
Query: 197 LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256
L +L+ K+ ++T + V++ +L H + ++HRDMK N L +D LK
Sbjct: 105 LAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLA 161
Query: 257 DFGLS-DFIKP----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI-------- 301
DFGL+ F ++ + V + +Y PE+L +R GP D+W G I
Sbjct: 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRS 221
Query: 302 ------------TYIL-LCG-----------RRPFWDKTE---DGIFKEVLRNKPDFRRK 334
T I LCG + + K E K R KP +
Sbjct: 222 PIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVK-- 279
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
A D + KLLV DP R+ A AL+H +
Sbjct: 280 -----DPHALDLIDKLLVLDPAKRIDADTALNHDF 309
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 2e-24
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+++G+G +G Y G A+K ++ V ++ E++K E+ +
Sbjct: 22 EVVGNGTYGQVYKGRHVKTGQLAAIK-------VMDVTEDEE---------EEIKLEINM 65
Query: 162 LQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
L+ + H N+ +Y AF D+ +++ ME C G + D + K + E A
Sbjct: 66 LKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAY 125
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ R++LR A H H ++HRD+K +N L E++ +K DFG+S + + +
Sbjct: 126 ICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFI 182
Query: 275 GSAYYVAPEVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN- 327
G+ Y++APEV+ P+ SD+WS+G+ + G P D + RN
Sbjct: 183 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 242
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P + K W S DF++ LVK+ +R + Q L HP++
Sbjct: 243 PPKLKSKKW---SKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 103 bits (257), Expect = 2e-24
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 38/290 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I + +G G +G Y T+K +G AVK ++ +S D E+++
Sbjct: 24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDP-------ISDVD---------EEIEA 67
Query: 158 EVKILQALAGHENVVKFYNAF-EDDNYV----YIAMELCEGGELLDRI--LAKKDSRYTE 210
E ILQ+L H NVVKFY F + D V ++ +ELC GG + + + L R E
Sbjct: 68 EYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDE 127
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+ ++ L H + ++HRD+K N L + + +K DFG+S + +
Sbjct: 128 AMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT---EGGVKLVDFGVSAQLTSTRLR 184
Query: 271 QDI-VGSAYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
++ VG+ +++APEV+ + + DVWS+G+ L G P +D +
Sbjct: 185 RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244
Query: 324 VLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ RN P P W S F+ + L+KD AR + L HP+++
Sbjct: 245 IPRNPPPTLLHPEKW---CRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y +++G G FG ++ KA+ V +K+I ++ +D ++ +
Sbjct: 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT------KDERL-------AAQ 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E ++L+ L+ H N++++Y F +D + I ME GG L + I + +S E
Sbjct: 48 NECQVLKLLS-HPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHF 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
Q+L H ++HRD+K +N L K +K DFG+S + K +VG+
Sbjct: 107 FVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSKAYTVVGT 164
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--PDFRR 333
Y++PE+ + K +SD+W++G + Y L +R F + +++ P R
Sbjct: 165 PCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDR 224
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
S + + +L DP R +Q ++ P
Sbjct: 225 -----YSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-24
Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 30/263 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR---E 158
KLLG G FG + +KA G A+K + K I IA ++V E
Sbjct: 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI---------------IAKDEVAHTVTE 45
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++LQ H + AF+ + + ME GGEL + ++ +TE+ A
Sbjct: 46 SRVLQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGA 102
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSA 277
+++ H +V+RD+K EN + +D +K TDFGL + I G + G+
Sbjct: 103 EIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTP 159
Query: 278 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--- 216
Query: 337 PSISNSAKDFVKKLLVKDPRARL 359
++S AK + LL KDP+ RL
Sbjct: 217 -TLSPEAKSLLAGLLKKDPKQRL 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 5e-24
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 31/300 (10%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR 137
GV+ + D Y D + + +GHG FG Y AT+ + VAVKK+
Sbjct: 3 GVVKDPEIADLFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKM-------- 54
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
S+ + +D+ +EVK LQ L H N +++ + ++ ++ ME C G
Sbjct: 55 --SYSGKQT--NEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSA-- 107
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257
+L E + A + L+ A H H ++HRD+K N L E +K D
Sbjct: 108 SDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLAD 164
Query: 258 FGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP-- 311
FG + P F VG+ Y++APEV+ + + + DVWS+G IT I L R+P
Sbjct: 165 FGSASKSSPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPL 220
Query: 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
F ++ + P + W ++S + FV L K P+ R +A+ L H +VR
Sbjct: 221 FNMNAMSALYHIAQNDSPTLQSNEW---TDSFRGFVDYCLQKIPQERPASAELLRHDFVR 277
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 33/265 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K ++K I+ + V E ++
Sbjct: 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK------------DEVAHTLTENRV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
LQ + H + +F+ + + ME GGEL +R+ ++ +R+ A +
Sbjct: 49 LQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEI 104
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVG 275
V + + +E +V+RD+K EN + +D +K TDFGL + IK G + G
Sbjct: 105 VSALDYLHSE---KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCG 158
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR- 217
Query: 335 PWPSISNSAKDFVKKLLVKDPRARL 359
++S AK + LL KDP+ RL
Sbjct: 218 ---TLSPEAKSLLSGLLKKDPKQRL 239
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 8e-24
Identities = 83/291 (28%), Positives = 127/291 (43%), Gaps = 46/291 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G Y + G +A+K+I + + K + E+ IL
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIR--------LELDESKF------NQIIMELDILH 54
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA------KKDSRYTEKDAAVVV 217
+V FY AF + VY+ ME + G L D++ A + VV
Sbjct: 55 KAVSPY-IVDFYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVV 112
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 276
+ + + E H ++HRD+KP N L + +K DFG+S + + K +G
Sbjct: 113 KGLKFLKEE---HNIIHRDVKPTNVLVNGNGQ---VKLCDFGVSGNLVASLAKTN--IGC 164
Query: 277 AYYVAPEVLKRKSGP--------ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE---VL 325
Y+APE +K GP +SDVWS+G+ + GR P+ +T IF + ++
Sbjct: 165 QSYMAPERIK-SGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIV 223
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376
P P S+ A+DFV K L K P R T AQ L HPW+ + +A
Sbjct: 224 DGDPP--TLP-SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 9e-24
Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 42/273 (15%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKN--KILIRVVSFQDLKMILPIAVEDVK 156
K+LG G FG ++ T G A+K ++K K+ RV + K
Sbjct: 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRT---------------K 46
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E IL A H +VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D
Sbjct: 47 MERDIL-AEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFY 103
Query: 217 VRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+ + L +A + HLH G+++RD+KPEN L E+ +K TDFGLS + I KK
Sbjct: 104 LAE-LALALD-HLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLSKESIDHEKKAYSF 158
Query: 274 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---P 329
G+ Y+APEV+ R+ +S D WS GV+ + +L G PF K +L+ K P
Sbjct: 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP 218
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
F +S A+ ++ L ++P RL A
Sbjct: 219 QF-------LSPEAQSLLRALFKRNPANRLGAG 244
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 42/273 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS--FQDLKMILP 149
+DFD K++G G FG + K++ A+K + K +++ R S F + + I+
Sbjct: 43 EDFDVI----KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM- 97
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY- 208
A A E +V+ + AF+DD Y+Y+ ME GG+L++ + S Y
Sbjct: 98 --------------AHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM-----SNYD 138
Query: 209 -TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
EK A +++ H G +HRD+KP+N L LK DFG +K
Sbjct: 139 IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK---SGHLKLADFGTC--MKMD 193
Query: 268 KKFQ----DIVGSAYYVAPEVLKRKS-----GPESDVWSIGVITYILLCGRRPFWDKTED 318
VG+ Y++PEVLK + G E D WS+GV Y +L G PF+ +
Sbjct: 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 253
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 351
G + +++ +K IS AKD + L
Sbjct: 254 GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFL 286
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 92/286 (32%), Positives = 138/286 (48%), Gaps = 43/286 (15%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K+LG G +G + T G A+K ++K I V + +D K E
Sbjct: 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI---VRNQKD--------TAHTKAE 50
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
IL+A+ H +V AF+ +Y+ +E GGEL + +++ + E A +
Sbjct: 51 RNILEAVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHL--EREGIFMEDTACFYLS 107
Query: 219 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVG 275
++ +A E HLH G+++RD+KPEN L + +K TDFGL + I G G
Sbjct: 108 EIS-LALE-HLHQQGIIYRDLKPENILLDA---QGHVKLTDFGLCKESIHEGTVTHTFCG 162
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLRNKPD 330
+ Y+APE+L R G D WS+G + Y +L G PF KT D I K L N P
Sbjct: 163 TIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLP- 220
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 371
P ++ A+D +KKLL ++P +RL AA+ SHP+ R
Sbjct: 221 ------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 1e-23
Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 61/309 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A D+ + +A+KKI Q+ + + A+ RE+ +L+
Sbjct: 10 IGEGTYGVVYKARDRVTNETIALKKIRLE---------QEDEGVPSTAI----REISLLK 56
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVV---VR 218
+ H N+V+ + + +Y+ E LD L K S K+ ++ +
Sbjct: 57 EMQ-HGNIVRLQDVVHSEKRLYLVFEY------LDLDLKKHMDSSPDFAKNPRLIKTYLY 109
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSA 277
Q+LR A CH H ++HRD+KP+N L + ++LK DFGL+ F P + F V +
Sbjct: 110 QILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEVVTL 167
Query: 278 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFKEVLR------ 326
+Y APE+L + S P D+WS+G I + + ++P + D D +FK + R
Sbjct: 168 WYRAPEILLGSRHYSTP-VDIWSVGCI-FAEMVNQKPLFPGDSEIDELFK-IFRILGTPN 224
Query: 327 --------NKPDFRRK--PW---------PSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ PD++ W P++ + D + K+L DP R+TA AL H
Sbjct: 225 EETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284
Query: 368 PWVREGGDA 376
+ ++ GDA
Sbjct: 285 EYFKDLGDA 293
|
Length = 294 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 1e-23
Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 51/247 (20%)
Query: 102 KLLGHGQFG--YTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K LG G FG Y K VAVK ++++ S ++ K L +E
Sbjct: 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA------SEEERKDFL--------KE 46
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++++ L GH NVV+ ++ +Y+ +E EGG+LLD + + + + + + ++
Sbjct: 47 ARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLK 105
Query: 219 QMLRVAAEC-----HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+L A + +L VHRD+ N L ED +K +DFGLS +
Sbjct: 106 DLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDVYDDD--- 159
Query: 272 DIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 317
YY APE LK +SDVWS GV+ + I G P+ +
Sbjct: 160 ------YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN 213
Query: 318 DGIFKEV 324
+ + + +
Sbjct: 214 EEVLEYL 220
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 99.7 bits (248), Expect = 2e-23
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 30/282 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ +GKLLG G FG Y+ D G +AVK+ V F V ++
Sbjct: 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQ----------VPFDPDSQETSKEVNALEC 53
Query: 158 EVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E+++L+ L H+ +V++Y D + + I +E GG + D++ K TE
Sbjct: 54 EIQLLKNLR-HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQL--KAYGALTENVTRR 110
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQ 271
RQ+L+ + H + +VHRD+K N L SA ++K DFG S I+ G +
Sbjct: 111 YTRQILQGVSYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRIQTICMSGTGIK 167
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 328
+ G+ Y+++PEV+ + G ++DVWS+ T + + +P W + E IFK + +
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSVAC-TVVEMLTEKPPWAEYEAMAAIFK--IATQ 224
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P P +S++ +DF+K++ V++ R R TA L HP+V
Sbjct: 225 PTKPMLP-DGVSDACRDFLKQIFVEEKR-RPTAEFLLRHPFV 264
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 99.8 bits (248), Expect = 2e-23
Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 32/281 (11%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
GKLLG G FG Y+ D G +A K+++ F V ++ E++
Sbjct: 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQ----------FDPESPETSKEVSALECEIQ 56
Query: 161 ILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+L+ L HE +V++Y D + + I ME GG + D++ K TE R
Sbjct: 57 LLKNLQ-HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQL--KAYGALTESVTRKYTR 113
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQDIV 274
Q+L + H + +VHRD+K N L SA ++K DFG S ++ G + +
Sbjct: 114 QILEGMSYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICMSGTGIRSVT 170
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDF 331
G+ Y+++PEV+ + G ++DVWS+G T + + +P W + E IFK + +P
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSLGC-TVVEMLTEKPPWAEYEAMAAIFK--IATQPT- 226
Query: 332 RRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
PS IS A+DF+ + V + R R +A + L HP+ +
Sbjct: 227 -NPQLPSHISEHARDFLGCIFV-EARHRPSAEELLRHPFAQ 265
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-23
Identities = 81/276 (29%), Positives = 128/276 (46%), Gaps = 33/276 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
+ LG G FG +AT K N D VA+K+ EK+KI I V+ V E
Sbjct: 36 RTLGTGSFGRVILATYK-NEDFPPVAIKRFEKSKI------------IKQKQVDHVFSER 82
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
KIL + H V Y +F+D++Y+Y+ +E GGE +++ R+ Q
Sbjct: 83 KILNYI-NHPFCVNLYGSFKDESYLYLVLEFVIGGEFF--TFLRRNKRFPNDVGCFYAAQ 139
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 279
++ + +V+RD+KPEN L +D +K TDFG + + + + G+ Y
Sbjct: 140 IVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVD--TRTYTLCGTPEY 194
Query: 280 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
+APE+ L G +D W++G+ Y +L G PF+ I++++L F +
Sbjct: 195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK----F 250
Query: 339 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 369
+ N+ K +KKLL D R A HPW
Sbjct: 251 LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286
|
Length = 340 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 92/339 (27%), Positives = 140/339 (41%), Gaps = 86/339 (25%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D G VA+KK+ + FQ+ V
Sbjct: 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR--------PFQN--------VTHA 59
Query: 156 KREVK--ILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGG--ELLDRILAKKD 205
KR + +L L H+N++ N F E+ VY+ MEL + +++ L +
Sbjct: 60 KRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHER 119
Query: 206 SRYTEKDAAVVVRQMLRVAAEC---HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
Y ++ QML C HLH G++HRD+KP N + KS D +LK DFGL
Sbjct: 120 MSY-------LLYQML-----CGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGL 164
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF------- 312
+ V + YY APEV+ E+ D+WS+G I ++ G F
Sbjct: 165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID 224
Query: 313 -WDK------TEDGIFKEVL--------RNKPDFRRKPWPSI-----------------S 340
W+K T F L N+P + + + +
Sbjct: 225 QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKA 284
Query: 341 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ A+D + K+LV DP R++ AL HP++ D SE+
Sbjct: 285 SQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEV 323
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 99.2 bits (247), Expect = 3e-23
Identities = 73/290 (25%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSF-QDLKMILPIAVEDVK 156
+ G+ LG G F Y A D G +AVK+ V++ ++ VE ++
Sbjct: 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQ----------VTYVRNTSSEQEEVVEALR 51
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E++++ L H ++++ A +D++ + +E GG + L K + E
Sbjct: 52 KEIRLMARL-NHPHIIRMLGATCEDSHFNLFVEWMAGGSV--SHLLSKYGAFKEAVIINY 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQ- 271
Q+LR + H + ++HRD+K N L S + L+ DFG L+ +FQ
Sbjct: 109 TEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKGTGAGEFQG 166
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEVL 325
++G+ ++APEVL+ + G DVWS+G + + + P W+ + IFK
Sbjct: 167 QLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHLALIFKIAS 225
Query: 326 RNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
PSI S +D + L P R + + L HP R
Sbjct: 226 ATTA-------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 7e-23
Identities = 84/305 (27%), Positives = 136/305 (44%), Gaps = 68/305 (22%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK----REV 159
+G G +G Y A +K G+ VA+KKI L E V RE+
Sbjct: 8 IGEGTYGVVYKARNKLTGEVVALKKIR-----------------LDTETEGVPSTAIREI 50
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVR 218
+L+ L H N+VK + +N +Y+ E L + L K D+ +++
Sbjct: 51 SLLKEL-NHPNIVKLLDVIHTENKLYLVFEF------LHQDLKKFMDASPLSGIPLPLIK 103
Query: 219 ----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDI 273
Q+L+ A CH H ++HRD+KP+N L + ++K DFGL+ F P + +
Sbjct: 104 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE 160
Query: 274 VGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN-- 327
V + +Y APE+L K S D+WS+G I ++ R F +E D +F+ + R
Sbjct: 161 VVTLWYRAPEILLGCKYYSTA-VDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLG 218
Query: 328 ----------------KPDF---RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 364
KP F R+ + P + +D + ++L DP R++A A
Sbjct: 219 TPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAA 278
Query: 365 LSHPW 369
L+HP+
Sbjct: 279 LAHPF 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 98.5 bits (245), Expect = 8e-23
Identities = 75/271 (27%), Positives = 136/271 (50%), Gaps = 34/271 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G +G ++ + D K+ K+L + Q K E + E ++
Sbjct: 6 KVLGTGAYGKVFLVRKVSGHD---SGKLYAMKVLKKATIVQKAK-----TTEHTRTERQV 57
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+ + +V + AF+ D +++ ++ GGEL + ++ R+ E++ + +++
Sbjct: 58 LEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIV 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG-KKFQDIVGSAYY 279
H G+++RD+K EN L S + + TDFGLS +F + ++ G+ Y
Sbjct: 116 LALEHLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEY 172
Query: 280 VAPEVLKRKSGPES---DVWSIGVITYILLCGRRPFWDKTEDG-------IFKEVLRNKP 329
+AP++++ G D WS+GV+ Y LL G PF T DG I + +L+++P
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPF---TVDGEKNSQAEISRRILKSEP 229
Query: 330 DFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 359
P+P +S AKD +++LL+KDP+ RL
Sbjct: 230 -----PYPQEMSALAKDIIQRLLMKDPKKRL 255
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 97.6 bits (244), Expect = 8e-23
Identities = 63/243 (25%), Positives = 96/243 (39%), Gaps = 60/243 (24%)
Query: 99 TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
+GK LG G FG T + +VAVK +++ E+
Sbjct: 2 ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGAS--------------EEEREE 47
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
E I++ L H N+V+ +YI E GG+LLD + +
Sbjct: 48 FLEEASIMKKL-SHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEK-------- 98
Query: 215 VVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ ++ +L++A + +L VHRD+ N L E+ +K +DFGLS
Sbjct: 99 LTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNCLV---TENLVVKISDFGLSR----- 150
Query: 268 KKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFW 313
DI YY APE LK K +SDVWS GV+ + I G +P+
Sbjct: 151 ----DIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYP 206
Query: 314 DKT 316
+
Sbjct: 207 GMS 209
|
Length = 258 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 99.1 bits (247), Expect = 9e-23
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 24/274 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G FG +A K + A+K ++K+ +L D VE E ++
Sbjct: 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLED----DD--------VECTMVERRV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H + + F+ +++ ME GG+L+ I + R+ E A +++
Sbjct: 49 LALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG--RFDEARARFYAAEII 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYV 280
H G+++RD+K +N L +D +K DFG+ + K G+ Y+
Sbjct: 107 CGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCKENMNGEGKASTFCGTPDYI 163
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APE+LK + ES D WS GV+ Y +L G+ PF + ED +F +L ++P F R W I
Sbjct: 164 APEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR--W--I 219
Query: 340 SNSAKDFVKKLLVKDPRARL-TAAQALSHPWVRE 372
S AKD + KL +DP RL HP+ R
Sbjct: 220 SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 99.0 bits (246), Expect = 9e-23
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 38/267 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA+G A+K ++K I+ + V E ++
Sbjct: 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAK------------DEVAHTLTESRV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVV 216
L+ H + +F+ + + ME GGEL +R+ ++ +R+ +
Sbjct: 49 LKN-TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEI--- 104
Query: 217 VRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDI 273
V+A +LH +V+RD+K EN + +D +K TDFGL + I +
Sbjct: 105 ------VSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKTF 155
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L F
Sbjct: 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP 215
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARL 359
R ++S AK + LL+KDP RL
Sbjct: 216 R----TLSADAKSLLSGLLIKDPNKRL 238
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 9e-23
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 26/278 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + K LG G +G Y ++ A+K++ DL + ED
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEV-------------DLGSMSQKEREDAV 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAA 214
E++IL A H N++ + AF D N + I ME G+L I +K R E++
Sbjct: 48 NEIRIL-ASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIW 106
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
+ Q+LR H ++HRD+K N + A + +K D G+S +K I
Sbjct: 107 RIFIQLLRGLQALHEQKILHRDLKSAN-ILLVANDL--VKIGDLGISKVLKKNMAKTQI- 162
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ +Y+APEV K + +SD+WS+G + Y + PF ++ + +V R K
Sbjct: 163 GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP--- 219
Query: 334 KPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P P I S ++F++ +L P+ R + L+ P V
Sbjct: 220 -PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 99.2 bits (247), Expect = 9e-23
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 25/263 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG Y K A+K + K +I+ + V E IL
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKK------------EVAHTIGERNILV 48
Query: 164 ALAGHEN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
E+ +V +F+ D+ +Y+ + GGEL + +K+ R++E A + +++
Sbjct: 49 RTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHL--QKEGRFSEDRAKFYIAELV 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYV 280
H + +V+RD+KPEN L + + DFGLS + K G+ Y+
Sbjct: 107 LALEHLHKYDIVYRDLKPENILLDA---TGHIALCDFGLSKANLTDNKTTNTFCGTTEYL 163
Query: 281 APEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
APEVL + G D WS+GV+ + + CG PF+ + +++ + K F P
Sbjct: 164 APEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF---PKNV 220
Query: 339 ISNSAKDFVKKLLVKDPRARLTA 361
+S+ + FVK LL ++P+ RL A
Sbjct: 221 LSDEGRQFVKGLLNRNPQHRLGA 243
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 9e-23
Identities = 84/300 (28%), Positives = 128/300 (42%), Gaps = 49/300 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A DK G VA+KK D + I P A+ RE+ +LQ
Sbjct: 9 IGEGTYGKVYKARDKNTGKLVALKK---------TRLEMDEEGIPPTAL----REISLLQ 55
Query: 164 ALAGHENVVKFYNA--FEDDN---YVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVV 216
L+ +V+ + E+ N +Y+ E + + +D K
Sbjct: 56 MLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSF 115
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
+ Q+L+ A CH HG++HRD+KP+N L K LK D GL F P K + +
Sbjct: 116 MYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVKSYTHEIV 173
Query: 276 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV----- 324
+ +Y APEVL D+WS+G I + + F +E IFK +
Sbjct: 174 TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233
Query: 325 --------LRN-------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
LR+ KP + P +S D ++K+L DP R++A AL+HP+
Sbjct: 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 2e-22
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 56/299 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G + A ++ + VA+K+ V D +P RE+ +L+
Sbjct: 8 IGEGTYGTVFKAKNRETHEIVALKR----------VRLDDDDEGVP---SSALREICLLK 54
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVV---VRQ 219
L H+N+V+ Y+ D + + E C D+ L K DS + D +V + Q
Sbjct: 55 ELK-HKNIVRLYDVLHSDKKLTLVFEYC------DQDLKKYFDSCNGDIDPEIVKSFMFQ 107
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
+L+ A CH H ++HRD+KP+N L ++ LK DFGL+ F P + + V + +
Sbjct: 108 LLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVRCYSAEVVTLW 164
Query: 279 YVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTE-----DGIFKEV------- 324
Y P+VL + D+WS G I L RP + + IF+ +
Sbjct: 165 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEES 224
Query: 325 ---LRNKPDFRRKP-------W----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ PD++ P P ++++ +D ++ LLV +P R++A +AL HP+
Sbjct: 225 WPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 2e-22
Identities = 79/301 (26%), Positives = 126/301 (41%), Gaps = 60/301 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP-IAVEDVKREVKIL 162
LG G + Y ++ G+ VA+K+I D + P A+ RE+ ++
Sbjct: 8 LGEGTYATVYKGRNRTTGEIVALKEIH-----------LDAEEGTPSTAI----REISLM 52
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK---DAAVV--- 216
+ L HEN+V+ ++ +N + + E + L K + + D V
Sbjct: 53 KELK-HENIVRLHDVIHTENKLMLVFEYMDKD------LKKYMDTHGVRGALDPNTVKSF 105
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
Q+L+ A CH + ++HRD+KP+N L LK DFGL+ F P F + V
Sbjct: 106 TYQLLKGIAFCHENRVLHRDLKPQNLLINK---RGELKLADFGLARAFGIPVNTFSNEVV 162
Query: 276 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------- 326
+ +Y AP+VL R D+WS+G I ++ GR F + ++ R
Sbjct: 163 TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTE 222
Query: 327 -----------NKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
KP F R P +P D + +LL +P R++A AL HP
Sbjct: 223 STWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHP 282
Query: 369 W 369
W
Sbjct: 283 W 283
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 98.1 bits (244), Expect = 2e-22
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G +G ++ D K+ K+L + Q K VE + E +
Sbjct: 6 KVLGTGAYGKVFLVRKVTGHDT---GKLYAMKVLQKAALVQKAK-----TVEHTRTERNV 57
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+ + +V + AF+ + +++ ++ GGE+ + + + ++E + +++
Sbjct: 58 LEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEII 115
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK-KFQDIVGSAYY 279
H G+V+RD+K EN L S + + TDFGLS +F+ K + G+ Y
Sbjct: 116 LALEHLHKLGIVYRDIKLENILLDS---EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEY 172
Query: 280 VAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLRNKPDFRR 333
+APE+++ K G D WS+G++ + LL G PF T+ + + +L+ P
Sbjct: 173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP---- 228
Query: 334 KPWPS-ISNSAKDFVKKLLVKDPRARLTAA-----QALSHPWVR 371
P+PS I A+D + KLL KDP+ RL A + HP+ +
Sbjct: 229 -PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFK 271
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 3e-22
Identities = 81/278 (29%), Positives = 129/278 (46%), Gaps = 32/278 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G FG ++A K A+K ++K+ +L + VE E ++
Sbjct: 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL------------MDDDVECTMVEKRV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKD-SRYTEKDAAVVV- 217
L H + Y F+ ++ ME GG+L+ I + K D R T A ++
Sbjct: 49 LSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICG 108
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGS 276
Q L H G+V+RD+K +N L + D +K DFG+ + + K G+
Sbjct: 109 LQFL------HSKGIVYRDLKLDNILLDT---DGHIKIADFGMCKENMLGDAKTCTFCGT 159
Query: 277 AYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+APE+L +K D WS GV+ Y +L G+ PF E+ +F+ + + P + R
Sbjct: 160 PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR-- 217
Query: 336 WPSISNSAKDFVKKLLVKDPRARL-TAAQALSHPWVRE 372
W ++ AKD + KL V++P RL HP+ RE
Sbjct: 218 W--LTREAKDILVKLFVREPERRLGVKGDIRQHPFFRE 253
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 96.6 bits (240), Expect = 4e-22
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 25/282 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R+Y ++LG G FG +A G A K++EK +I R + M L
Sbjct: 3 RQY---RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKR----KGESMAL------- 48
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E +IL+ + + VV A+E + + + + + GG+L I + + E+ A
Sbjct: 49 -NEKQILEKV-NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALF 106
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++L + H V+RD+KPEN L + ++ +D GL+ I G+ + VG
Sbjct: 107 YAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGESIRGRVG 163
Query: 276 SAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APEVL ++ D W +G + Y ++ G+ PF + E +EV R +
Sbjct: 164 TVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV 223
Query: 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 371
S AK K LL KDP+ RL A + HP+ R
Sbjct: 224 YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 97.3 bits (242), Expect = 5e-22
Identities = 91/323 (28%), Positives = 135/323 (41%), Gaps = 65/323 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
RYT K +G G +G A DK G++VA+KK+ + FQ I +
Sbjct: 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR--------PFQS-----EIFAKRA 61
Query: 156 KREVKILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
RE+ +L+ + HENV+ + F+D Y+ M + L +I+
Sbjct: 62 YRELTLLKHMQ-HENVIGLLDVFTSAVSGDEFQD---FYLVMPYMQTD--LQKIMGHP-- 113
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+E +V QML H G++HRD+KP N + ED LK DFGL+
Sbjct: 114 -LSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--HA 167
Query: 267 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-------------- 310
+ V + +Y APEV+ D+WS+G I +L G+
Sbjct: 168 DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 227
Query: 311 ---------PFWDKTEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRA 357
F K ED K +++ P + RK +P S A D ++K+L D
Sbjct: 228 LKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDK 287
Query: 358 RLTAAQALSHPWVREGGDASEIP 380
RLTA +AL HP+ DA E
Sbjct: 288 RLTATEALEHPYFDSFRDADEET 310
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 5e-22
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 22/274 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG KA G A KK++K ++ R + +M L E KIL
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----KGEQMAL--------NEKKIL- 47
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+V AFE + + + M L GG+L I + + E A Q++
Sbjct: 48 EKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICG 107
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 283
H +V+RD+KPEN L + +++ +D GL+ +K GKK + G+ Y+APE
Sbjct: 108 LEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPE 164
Query: 284 VLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 342
VL+ + S D +++G Y ++ GR PF + E +E+ R + + S
Sbjct: 165 VLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPE 224
Query: 343 AKDFVKKLLVKDPRARL-----TAAQALSHPWVR 371
AKD + LL KDP RL +A + HP +
Sbjct: 225 AKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 9e-22
Identities = 75/302 (24%), Positives = 128/302 (42%), Gaps = 54/302 (17%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+G G +G Y A D +G+ VA+KK+ + + I + S RE+ +
Sbjct: 15 IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSL---------------REITL 59
Query: 162 LQALAGHENVVKFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
L L H N+V+ + +++ ME CE + L +L + ++E ++ Q
Sbjct: 60 LLNLR-HPNIVELKEVVVGKHLDSIFLVMEYCE--QDLASLLDNMPTPFSESQVKCLMLQ 116
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
+LR H + ++HRD+K N L LK DFGL+ + P K V + +
Sbjct: 117 LLRGLQYLHENFIIHRDLKVSNLLLTDKGC---LKIADFGLARTYGLPAKPMTPKVVTLW 173
Query: 279 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE---------------DGIF 321
Y APE+L D+W++G I LL + K+E + I+
Sbjct: 174 YRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233
Query: 322 ----------KEVLRNKP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K L +P + + +P +S + + LL+ DP+ R TA +AL +
Sbjct: 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293
Query: 371 RE 372
+E
Sbjct: 294 KE 295
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 1e-21
Identities = 94/327 (28%), Positives = 139/327 (42%), Gaps = 67/327 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I +++G G +G A D G++VA+KKI N + V D IL
Sbjct: 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--NDVFEHV---SDATRIL-------- 47
Query: 157 REVKILQALAGHENVVKFY--------NAFEDDNYVYIAMELCEGGELLDRILAKKDSRY 208
RE+K+L+ L H ++V+ F+D +Y+ EL E +L I A D
Sbjct: 48 REIKLLRLLR-HPDIVEIKHIMLPPSRREFKD---IYVVFELME-SDLHQVIKANDD--L 100
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---K 265
T + + Q+LR H + HRD+KP+N L A D LK DFGL+
Sbjct: 101 TPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDT 157
Query: 266 PGKKF-QDIVGSAYYVAPEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDK------ 315
P F D V + +Y APE+ K P D+WSIG I +L G+ F K
Sbjct: 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL 217
Query: 316 -------------TEDGI-------FKEVLRNKP--DFRRKPWPSISNSAKDFVKKLLVK 353
T + + +R K F +K +P+ A +++LL
Sbjct: 218 DLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAF 276
Query: 354 DPRARLTAAQALSHPWVREGGDASEIP 380
DP+ R TA +AL+ P+ + P
Sbjct: 277 DPKDRPTAEEALADPYFKGLAKVEREP 303
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 1e-21
Identities = 83/291 (28%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR--VVSFQDLKMILPI 150
DF+ I K++G G FG V K G A+K + K ++L R F++ + +L
Sbjct: 2 DFE----ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL-- 55
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
V + + + L + AF+D+N +Y+ M+ GG+LL +L+K + R E
Sbjct: 56 ----VNGDRRWITNL---------HYAFQDENNLYLVMDYYVGGDLLT-LLSKFEDRLPE 101
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
A + +M+ H G VHRD+KP+N L ++ ++ DFG +
Sbjct: 102 DMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSCLRLLADGTV 158
Query: 271 QD--IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322
Q VG+ Y++PE+L K + GPE D WS+GV Y +L G PF+ ++ +
Sbjct: 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 218
Query: 323 EVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 369
+++ +K F+ P +S AKD +++L+ P RL HP+
Sbjct: 219 KIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRNGLQDFKDHPF 268
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 2e-21
Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 34/282 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y K +G G FG + K +G + +K+I +K+ P E+ +
Sbjct: 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-------------PKEREESR 47
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+EV +L + H N+V++ +FE++ +YI M+ CEGG+L +I A++ + E
Sbjct: 48 KEVAVLSNMK-HPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDW 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIV 274
Q+ H ++HRD+K +N FL K D ++K DFG++ + + + +
Sbjct: 107 FVQICLALKHVHDRKILHRDIKSQNIFLTK----DGTIKLGDFGIARVLNSTVELARTCI 162
Query: 275 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-VLRNKPDFR 332
G+ YY++PE+ + R +SD+W++G + Y + + F E G K VL+
Sbjct: 163 GTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAF----EAGNMKNLVLK----II 214
Query: 333 RKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
R +P + S ++ V +L ++PR R + L ++
Sbjct: 215 RGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 95.1 bits (237), Expect = 2e-21
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 26/264 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG +A K G+ A+K ++K I+ R D VE + E +I +
Sbjct: 7 LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR-----D-------EVESLMCEKRIFE 54
Query: 164 AL--AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
H +V + F+ +++V ME GG+L+ I ++E A ++
Sbjct: 55 TANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI---HTDVFSEPRAVFYAACVV 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H + +V+RD+K +N L + + +K DFGL + + G + G+ ++
Sbjct: 112 LGLQYLHENKIVYRDLKLDNLLLDT---EGFVKIADFGLCKEGMGFGDRTSTFCGTPEFL 168
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL S + D W +GV+ Y +L G PF E+ +F ++ ++ + R +
Sbjct: 169 APEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FL 224
Query: 340 SNSAKDFVKKLLVKDPRARLTAAQ 363
S A +++LL ++P RL + +
Sbjct: 225 SREAISIMRRLLRRNPERRLGSGE 248
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 95.1 bits (236), Expect = 2e-21
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 36/273 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR--VVSFQDLKMILPIAVEDV 155
+ I K++G G FG V K A+K + K ++L R F++ + +L V
Sbjct: 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVL------V 56
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+ + + L + AF+D+NY+Y+ M+ GG+LL +L+K + R E A
Sbjct: 57 NGDCQWITTL---------HYAFQDENYLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARF 106
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--I 273
+ +M+ H VHRD+KP+N L + ++ DFG + Q
Sbjct: 107 YIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM---NGHIRLADFGSCLKMNQDGTVQSSVA 163
Query: 274 VGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
VG+ Y++PE+L+ K GPE D WS+GV Y +L G PF+ ++ + +++ +
Sbjct: 164 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223
Query: 328 KPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 356
+ F+ +PS +S AKD +++L+ R
Sbjct: 224 EERFQ---FPSHITDVSEEAKDLIQRLICSRER 253
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 2e-21
Identities = 82/318 (25%), Positives = 125/318 (39%), Gaps = 67/318 (21%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K +G G FG + A+K + K +L+R VK E I
Sbjct: 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRN------------QAAHVKAERDI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A A +E VVK Y +F+D + +Y M+ GG+++ L + + E A + ++
Sbjct: 55 L-AEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMS--LLIRLGIFEEDLARFYIAELT 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---------SDFIKPGKKF-Q 271
H G +HRD+KP+N L D +K TDFGL S + + G Q
Sbjct: 112 CAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQ 168
Query: 272 D----------------------------------IVGSAYYVAPEVLKRKSGPES-DVW 296
D +VG+ Y+APEVL R + D W
Sbjct: 169 DSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW 228
Query: 297 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
S+GVI Y +L G+ PF T +V+ + +S A D + + L
Sbjct: 229 SVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCCGAE 287
Query: 357 ARL---TAAQALSHPWVR 371
RL A + +HP+ +
Sbjct: 288 DRLGKNGADEIKAHPFFK 305
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 4e-21
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 32/283 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY + + LG G FG Y+ DK E+ K+L + + +L P
Sbjct: 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVL-KEIPVGELN---PNETVQAN 50
Query: 157 REVKILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDA 213
+E ++L L H +VKF+ +F E D + I E CEG +L ++ L +E
Sbjct: 51 QEAQLLSKLD-HPAIVKFHASFLERDAFCIIT-EYCEGRDLDCKLEELKHTGKTLSENQV 108
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QD 272
Q+L H ++HRD+K +N K ++ LK DFG+S +
Sbjct: 109 CEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLLMGSCDLATT 164
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ YY++PE LK + +SD+WS+G I Y + C F + + ++
Sbjct: 165 FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG---- 220
Query: 332 RRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P PS+ S ++ +L KDP R +AA+ L +P++
Sbjct: 221 ---PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 93.2 bits (231), Expect = 5e-21
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 25/283 (8%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R+Y ++LG G FG +A G A KK+EK +I R + M L
Sbjct: 3 RQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----KGESMAL------- 48
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E +IL+ + VV A+E + + + + L GG+L I ++ + E A
Sbjct: 49 -NEKQILEKV-NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVF 106
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
++ + H +V+RD+KPEN L + ++ +D GL+ + G+ + VG
Sbjct: 107 YAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAVHVPEGQTIKGRVG 163
Query: 276 SAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APEV+K + S D W++G + Y ++ G+ PF + + +EV R + + +
Sbjct: 164 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEE 223
Query: 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
S A+ K LL KDP+ RL A + HP ++
Sbjct: 224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 93.9 bits (233), Expect = 5e-21
Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 23/260 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G FG +A K G+ AVK ++K+ +LI D VE E ++
Sbjct: 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID----DD--------VECTMVEKRV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L + + Y F+ +++ ME GG+L+ I K R+ A +++
Sbjct: 49 LALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIV 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H G+++RD+K +N + D +K DFG+ + + + G+ Y+
Sbjct: 107 CGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDNRASTFCGTPDYI 163
Query: 281 APEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APE+L+ K D WS GV+ Y +L G+ PF ED +F+ + + P + R W I
Sbjct: 164 APEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR--W--I 219
Query: 340 SNSAKDFVKKLLVKDPRARL 359
+ +KD ++KL +DP RL
Sbjct: 220 TKESKDILEKLFERDPTRRL 239
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 93.6 bits (232), Expect = 7e-21
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 31/287 (10%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
+ +D ++ +T + +GHG FG Y A D + VA+KK+ + Q +
Sbjct: 19 FKEDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYS-------GKQSNE---- 67
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+D+ +EVK LQ + H N +++ + ++ ++ ME C G +L
Sbjct: 68 -KWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQ 123
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + A + L+ A H H ++HRD+K N L E +K DFG + P
Sbjct: 124 EVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPANS 180
Query: 270 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 323
F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F ++
Sbjct: 181 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 236
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P + W S+ ++FV L K P+ R T+ + L H +V
Sbjct: 237 AQNESPTLQSNEW---SDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 7e-21
Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 27/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K++G G FG + K+ A+K + K +++ R S
Sbjct: 45 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-------------AFFW 91
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A
Sbjct: 92 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD--VPEKWARFYT 148
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VG 275
+++ H G +HRD+KP+N L + LK DFG K G D VG
Sbjct: 149 AEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVG 205
Query: 276 SAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+ Y++PEVLK + G E D WS+GV Y +L G PF+ + G + +++ +K
Sbjct: 206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 265
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARL 359
IS AK+ + L D RL
Sbjct: 266 LTFPDDNDISKEAKNLICAFLT-DREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 7e-21
Identities = 76/262 (29%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG +A KA AVK ++K IL + ++ K I+ E +
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK----KEEKHIM--------SERNV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H +V + +F+ + +Y ++ GGEL + +++ + E A ++
Sbjct: 49 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEIA 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H +V+RD+KPEN L S + TDFGL + I+ G+ Y+
Sbjct: 107 SALGYLHSLNIVYRDLKPENILLDS---QGHIVLTDFGLCKENIEHNGTTSTFCGTPEYL 163
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL ++ + D W +G + Y +L G PF+ + ++ +L NKP + K P+I
Sbjct: 164 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKP-LQLK--PNI 219
Query: 340 SNSAKDFVKKLLVKDPRARLTA 361
+NSA+ ++ LL KD RL A
Sbjct: 220 TNSARHLLEGLLQKDRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 93.2 bits (231), Expect = 9e-21
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 34/267 (12%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRV-AVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ I K++G G FG V K N D+V A+K + K ++L R A
Sbjct: 3 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKR-------------AETACF 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE + + ++ + + AF+D+N +Y+ M+ GG+LL +L+K + R E A
Sbjct: 49 REERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFY 107
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IV 274
+ +M+ H VHRD+KP+N L + ++ DFG + Q V
Sbjct: 108 LAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSVAV 164
Query: 275 GSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
G+ Y++PE+L K K GPE D WS+GV Y +L G PF+ ++ + +++ +K
Sbjct: 165 GTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 224
Query: 329 PDFRRKPWPS----ISNSAKDFVKKLL 351
F+ +P+ +S AKD +++L+
Sbjct: 225 ERFQ---FPAQVTDVSEDAKDLIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 9e-21
Identities = 84/322 (26%), Positives = 120/322 (37%), Gaps = 67/322 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R Y I LG G FG Y A G VA+KK I + + +D PI
Sbjct: 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKK-------ILMHNEKDG---FPITAL-- 55
Query: 156 KREVKILQALAGHENVVKFYNAF--------EDDNYVYIAMELCEGGELLDRILAKKDSR 207
RE+KIL+ L H NVV + VY+ + L +L +
Sbjct: 56 -REIKILKKLK-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHD--LSGLLENPSVK 111
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--- 264
TE + Q+L H + ++HRD+K N L + LK DFGL+
Sbjct: 112 LTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN---QGILKIADFGLARPYDGP 168
Query: 265 --KPGK-------KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 313
P K+ ++V + +Y PE+L +R+ D+W IG + + R
Sbjct: 169 PPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228
Query: 314 DKTE----DGIFK-------------EVLRNKPDFR-RKPWPSI--SNSAK------DFV 347
K++ IFK L +P K D +
Sbjct: 229 GKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLL 288
Query: 348 KKLLVKDPRARLTAAQALSHPW 369
KLL DP RLTA+ AL HP+
Sbjct: 289 SKLLSLDPYKRLTASDALEHPY 310
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 1e-20
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 49/301 (16%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
++ YD++ +R +LG G +G Y A D + R+A+K+I + +D
Sbjct: 2 EYEYEYDENGER-----VVLGKGTYGIVYAARDLSTQVRIAIKEIPE----------RDS 46
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
+ + P+ E+ + L H N+V++ + ++ + I ME GG L +L K
Sbjct: 47 RYVQPL-----HEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVPGGSLSA-LLRSK 99
Query: 205 DSRYTEKDAAVV--VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+ + ++ +Q+L H + +VHRD+K +N L + +K +DFG S
Sbjct: 100 WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS--GVVKISDFGTSK 157
Query: 263 F---IKPGKKFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKT 316
I P + G+ Y+APEV+ R G +D+WS+G + G+ PF +
Sbjct: 158 RLAGINPCT--ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELG 215
Query: 317 ED-------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
E G+FK + P+ S+S AK+F+ + DP R +A L P+
Sbjct: 216 EPQAAMFKVGMFK-IHPEIPE-------SLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267
Query: 370 V 370
+
Sbjct: 268 L 268
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 91.6 bits (227), Expect = 1e-20
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D + +T + +G G FG Y D + VA+K +I + +D +
Sbjct: 1 DPEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIK-------IIDLEEAED-------EI 46
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
ED+++E+ +L + ++Y ++ ++I ME GG LD + K E
Sbjct: 47 EDIQQEITVLSQ-CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLL---KPGPLEETY 102
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A ++R++L+ H +HRD+K N L E +K DFG++ + + K
Sbjct: 103 IATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRN 159
Query: 272 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
VG+ +++APEV+K+ + ++D+WS+G+ L G P D + + +N P
Sbjct: 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP- 218
Query: 331 FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P++ S K+FV+ L KDPR R TA + L H ++
Sbjct: 219 ------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 2e-20
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVRQML 221
A H +VK ++ F+ D+ + + ME GG+L +I + + E + ++ Q++
Sbjct: 120 AACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIV 179
Query: 222 RVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV------ 274
E H ++HRD+K N FL + +K DFG S K++ D V
Sbjct: 180 LALDEVHSRKMMHRDLKSANIFLMPTG----IIKLGDFGFS------KQYSDSVSLDVAS 229
Query: 275 ---GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
G+ YY+APE+ +RK ++D+WS+GVI Y LL RPF ++ I ++VL K D
Sbjct: 230 SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD 289
Query: 331 FRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQAL 365
P+P +S+ K + LL K+P R T Q L
Sbjct: 290 ----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLL 321
|
Length = 478 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 2e-20
Identities = 95/329 (28%), Positives = 141/329 (42%), Gaps = 64/329 (19%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RY + +G G +G A D +G +VA+KKI +F +P
Sbjct: 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPH--------AFD-----VPTLA 48
Query: 153 EDVKREVKILQALAGHENVVKFYNAF----EDDNYVYIAMELCEGGELLDRILAKKDSRY 208
+ RE+KIL+ H+N++ + D VY+ M+L E L I+ D
Sbjct: 49 KRTLRELKILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDLMESD--LHHII-HSDQPL 104
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFI 264
TE+ + Q+LR H ++HRD+KP N L ED L+ DFG LS
Sbjct: 105 TEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSP 161
Query: 265 KPGKKFQ-DIVGSAYYVAPEVLKRKSGPES----DVWSIGVITYILLCGRRP-FWDKT-- 316
K F + V + +Y APE+L S PE D+WS+G I +L GRR F K
Sbjct: 162 TEHKYFMTEYVATRWYRAPELL--LSLPEYTTAIDMWSVGCIFAEML-GRRQLFPGKNYV 218
Query: 317 -------------EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLL 351
+ + + ++N P + PW P S A D + ++L
Sbjct: 219 HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQML 278
Query: 352 VKDPRARLTAAQALSHPWVREGGDASEIP 380
DP R+T QAL HP++ + D + P
Sbjct: 279 QFDPEERITVEQALQHPFLAQYHDPDDEP 307
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 2e-20
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 73/309 (23%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKK-IEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
L+G G +G K G VA+KK +E +D KM+ IA+ RE+++
Sbjct: 8 LVGEGSYGMVMKCKHKETGQIVAIKKFLES----------EDDKMVKKIAM----REIRM 53
Query: 162 LQALAGHENVV----------KFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
L+ L HEN+V + Y FE D+ V +E G LD +K
Sbjct: 54 LKQLR-HENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNG--LDESRVRK------ 104
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKK 269
+ Q+LR CH H ++HRD+KPEN L + +K DFG + + PG+
Sbjct: 105 -----YLFQILRGIEFCHSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEV 156
Query: 270 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVL- 325
+ D V + +Y APE+L K G D+W++G + +L G F D D ++ +
Sbjct: 157 YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216
Query: 326 ------RNKPDFRRKP-------------------WPSISNSAKDFVKKLLVKDPRARLT 360
R++ F++ P +P +S D K+ L DP R +
Sbjct: 217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS 276
Query: 361 AAQALSHPW 369
++Q L H +
Sbjct: 277 SSQLLHHEF 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 92.0 bits (228), Expect = 2e-20
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKILIRVVSF 141
+ + D ++ ++ + +GHG FG Y A D N + VA+KK+ + N+
Sbjct: 6 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-------- 57
Query: 142 QDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL 201
+D+ +EV+ LQ L H N +++ + ++ ++ ME C G +L
Sbjct: 58 ---------KWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLL 105
Query: 202 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
E + A V L+ A H H ++HRD+K N L E +K DFG +
Sbjct: 106 EVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSA 162
Query: 262 DFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDK 315
+ P F VG+ Y++APEV+ + + + DVWS+G IT I L R+P F
Sbjct: 163 SIMAPANXF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMN 218
Query: 316 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
++ P + W S ++FV L K P+ R T+ L H
Sbjct: 219 AMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKH 267
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 3e-20
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 44/294 (14%)
Query: 93 DFDRR-----YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
D RR + + + +G G +G Y A + G+ A+K +I++ +D
Sbjct: 1 DLSRRNPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIK-------VIKLEPGEDF--- 50
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
V ++ I+ H N+V ++ ++ + ++I ME C GG L D +
Sbjct: 51 ------AVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQD--IYHVTGP 102
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+E A V R+ L+ H G +HRD+K N L ++ +K DFG+S I
Sbjct: 103 LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSAQITAT 159
Query: 268 -KKFQDIVGSAYYVAPEV--LKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIF 321
K + +G+ Y++APEV ++RK G D+W++G+ L + P +D +F
Sbjct: 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF 219
Query: 322 KEVLRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
L K +F+ + W SNS FVK L K+P+ R TA + L HP+
Sbjct: 220 ---LMTKSNFQPPKLKDKMKW---SNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 92.0 bits (228), Expect = 3e-20
Identities = 90/320 (28%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G G +G A D G RVAVKK+ + FQ + I +
Sbjct: 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR--------PFQSI-----IHAKRTY 64
Query: 157 REVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + T+
Sbjct: 65 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTD 119
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ Q+LR H ++HRD+KP N + ED LK DFGL+ +
Sbjct: 120 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEM 174
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APE++ D+WS+G I LL GR F K +LR
Sbjct: 175 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234
Query: 327 NKPD---FRRKPWPSISN----------------------SAKDFVKKLLVKDPRARLTA 361
P ++ S N A D ++K+LV D R+TA
Sbjct: 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 294
Query: 362 AQALSHPWVREGGDASEIPI 381
AQAL+H + + D + P+
Sbjct: 295 AQALAHAYFAQYHDPDDEPV 314
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 4e-20
Identities = 90/324 (27%), Positives = 135/324 (41%), Gaps = 70/324 (21%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RY + LG G G + A D RVAVKKI D P +V
Sbjct: 2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKI----------VLTD-----PQSV 46
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNY--------------VYIAMELCEGGELLD 198
+ RE+KI++ L H+N+VK Y VYI E E L
Sbjct: 47 KHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETD--LA 103
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+L + +E+ A + + Q+LR H ++HRD+KP N + ED LK DF
Sbjct: 104 NVL--EQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVLKIGDF 159
Query: 259 GLSDFIKP-----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 311
GL+ + P G + +V + +Y +P +L D+W+ G I +L G+
Sbjct: 160 GLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPL 218
Query: 312 FWDKTE--------DGI-------FKEVLRNKPDF-------RRKPW----PSISNSAKD 345
F E + + E+L P F R+P P ++ A D
Sbjct: 219 FAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALD 278
Query: 346 FVKKLLVKDPRARLTAAQALSHPW 369
F++++L +P RLTA +AL HP+
Sbjct: 279 FLEQILTFNPMDRLTAEEALMHPY 302
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 5e-20
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 50/300 (16%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKILIRVVSFQDLKMI 147
Y D + +G +G G G Y K G +AVK++ + NK ++ K I
Sbjct: 10 YPADLNDLENLG-EIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--------EENKRI 60
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL----CEGGELLDRILAK 203
L ++ ++ +VK Y F D+ V+I MEL + +LL RI
Sbjct: 61 L--------MDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLD--KLLKRIQGP 110
Query: 204 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
K +V+ + + + HG++HRD+KP N L ++K DFG+S
Sbjct: 111 IPEDILGKMTVAIVKALHYLKEK---HGVIHRDVKPSNILLD---ASGNVKLCDFGISGR 164
Query: 264 IKPGKKFQDIVGSAYYVAPEVLK-RKSGPE----SDVWSIGVITYILLCGRRPFWD-KTE 317
+ K G A Y+APE + P+ +DVWS+G+ L G+ P+ + KTE
Sbjct: 165 LVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE 224
Query: 318 DGIFKEVLRNKPDFRRKPWPSISNSA------KDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ ++L+ +P PS+ + FV L KD R R + L HP++R
Sbjct: 225 FEVLTKILQEEP-------PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 6e-20
Identities = 81/264 (30%), Positives = 133/264 (50%), Gaps = 27/264 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG +A KA+G AVK ++K IL + ++ K I+ E +
Sbjct: 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK----KEQKHIMA--------ERNV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H +V + +F+ + +Y ++ GGEL + +++ + E A ++
Sbjct: 49 LLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHL--QRERSFPEPRARFYAAEI- 105
Query: 222 RVAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAY 278
+A +LH L ++RD+KPEN L S + TDFGL + I+ K G+
Sbjct: 106 -ASALGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGIEHSKTTSTFCGTPE 161
Query: 279 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337
Y+APEVL+++ + D W +G + Y +L G PF+ + ++ +L NKP R K P
Sbjct: 162 YLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL-NKP-LRLK--P 217
Query: 338 SISNSAKDFVKKLLVKDPRARLTA 361
+IS SA+ ++ LL KD RL A
Sbjct: 218 NISVSARHLLEGLLQKDRTKRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 6e-20
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 71/307 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y +K G VA+KKI R+ S ++ + A+ RE+ +L+
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKI-------RLESEEE--GVPSTAI----REISLLK 54
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCE-----------GGELLDRILAKKDSRYTEKD 212
L H N+V + ++ +Y+ E G+ +D L K Y
Sbjct: 55 ELQ-HPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKS---YL--- 107
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
Q+L+ CH ++HRD+KP+N L + +K DFGL+ F P + +
Sbjct: 108 -----YQILQGILFCHSRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGIPVRVYT 159
Query: 272 DIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK---- 322
V + +Y APEVL R S P D+WSIG I + + ++P + D D +F+
Sbjct: 160 HEVVTLWYRAPEVLLGSPRYSTP-VDIWSIGTI-FAEMATKKPLFHGDSEIDQLFRIFRI 217
Query: 323 ------------EVLRN--------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
L + K R ++ D ++K+L+ DP R++A
Sbjct: 218 LGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK 277
Query: 363 QALSHPW 369
+AL+HP+
Sbjct: 278 KALNHPY 284
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 91.2 bits (226), Expect = 6e-20
Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 27/269 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + K++G G FG + K++ A+K + K +++ R S
Sbjct: 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDS-------------AFFW 91
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + + A A VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A
Sbjct: 92 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYD--VPEKWAKFYT 148
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VG 275
+++ H GL+HRD+KP+N L + LK DFG + G D VG
Sbjct: 149 AEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVG 205
Query: 276 SAYYVAPEVLKRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+ Y++PEVLK + G E D WS+GV + +L G PF+ + G + +++ +K
Sbjct: 206 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS 265
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARL 359
IS AK+ + L D RL
Sbjct: 266 LNFPEDVEISKHAKNLICAFLT-DREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 7e-20
Identities = 71/261 (27%), Positives = 124/261 (47%), Gaps = 25/261 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+LG G FG +A K + A+K ++K+ V QD VE E ++
Sbjct: 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKD------VIIQDDD------VECTMVEKRV 53
Query: 162 LQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
L AL G + + ++ F+ + +Y ME GG+L+ I ++ ++ E A ++
Sbjct: 54 L-ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGKFKEPHAVFYAAEI 110
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYY 279
H G+++RD+K +N + + + +K DFG+ + I GK + G+ Y
Sbjct: 111 AIGLFFLHSKGIIYRDLKLDNVMLDA---EGHIKIADFGMCKENIFGGKTTRTFCGTPDY 167
Query: 280 VAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
+APE + + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S
Sbjct: 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----S 223
Query: 339 ISNSAKDFVKKLLVKDPRARL 359
+S A K LL K P RL
Sbjct: 224 LSKEAVSICKGLLTKHPAKRL 244
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 8e-20
Identities = 86/319 (26%), Positives = 143/319 (44%), Gaps = 58/319 (18%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY K +G G +G A D+ G +VA+KK+ + FQ + +
Sbjct: 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR--------PFQS-----ELFAKRAY 62
Query: 157 REVKILQALAGHENVVKFYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTE 210
RE+++L+ + HENV+ + F D + Y+ M G L +++ K + +E
Sbjct: 63 RELRLLKHMK-HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLM--KHEKLSE 117
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+V QML+ H G++HRD+KP N + ED LK DFGL+ + +
Sbjct: 118 DRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QTDSEM 172
Query: 271 QDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR------------------- 309
V + +Y APEV+ D+WS+G I +L G+
Sbjct: 173 TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT 232
Query: 310 ----RPFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTA 361
+ F K + K ++ P FR+K + P+ + A + ++K+LV D +R+TA
Sbjct: 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITA 292
Query: 362 AQALSHPWVREGGDASEIP 380
A+AL+HP+ E D +
Sbjct: 293 AEALAHPYFEEFHDPEDET 311
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 1e-19
Identities = 90/316 (28%), Positives = 139/316 (43%), Gaps = 75/316 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G+G FG + TD +G RVA+KK+ FQ+L ++ + V RE+K+L
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPN--------VFQNL-----VSCKRVFRELKMLC 54
Query: 164 ALAGHENVVKFYNA--------FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
H+NV+ + FE+ +Y+ EL + L +I+ + V
Sbjct: 55 FFK-HDNVLSALDILQPPHIDPFEE---IYVVTELMQSD--LHKIIVSP-QPLSSDHVKV 107
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QD 272
+ Q+LR H G++HRD+KP N L S + LK DFGL+ +P + Q+
Sbjct: 108 FLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEPDESKHMTQE 164
Query: 273 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF------------------ 312
+V + YY APE+L R D+WS+G I LL R F
Sbjct: 165 VV-TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT 223
Query: 313 -----WDKTEDGIFKEVLRNKPDFRRKPWPSIS----------NSAKDFVKKLLVKDPRA 357
+G +LR KP PS+ + A + ++LV DP
Sbjct: 224 PSLEAMRSACEGARAHILRGPH----KP-PSLPVLYTLSSQATHEAVHLLCRMLVFDPDK 278
Query: 358 RLTAAQALSHPWVREG 373
R++AA AL+HP++ EG
Sbjct: 279 RISAADALAHPYLDEG 294
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.8 bits (223), Expect = 1e-19
Identities = 80/335 (23%), Positives = 140/335 (41%), Gaps = 53/335 (15%)
Query: 93 DFDRRYT-IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
RY G LG G +G A D G VA+KK++ +I V + L + I
Sbjct: 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIH 64
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
RE+KI+ + HEN++ + + + +++ + M++ L +++ +K R TE
Sbjct: 65 FT-TLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASD--LKKVVDRK-IRLTES 119
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---------- 261
++ Q+L H +HRD+ P N S K DFGL+
Sbjct: 120 QVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI---CKIADFGLARRYGYPPYSD 176
Query: 262 -----DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-- 312
+ ++ ++ V + +Y APE+L K D+WS+G I LL G+ F
Sbjct: 177 TLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236
Query: 313 ---------------------W-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 350
W + ++ E KP + +P+ S+ A D ++ L
Sbjct: 237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL 296
Query: 351 LVKDPRARLTAAQALSHPWVREGG---DASEIPID 382
L +P R++A +AL H + + D S++P +
Sbjct: 297 LKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFN 331
|
Length = 335 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 89.3 bits (221), Expect = 2e-19
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 23/262 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG +A K +G AVK ++K +L R ++ K I+ E +
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR----KEQKHIMA--------ERNV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H +V + +F+ +Y ++ GGEL + +++ + E A ++
Sbjct: 49 LLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHL--QRERSFPEPRARFYAAEIA 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H +V+RD+KPEN L S + TDFGL + I G+ Y+
Sbjct: 107 SALGYLHSINIVYRDLKPENILLDSQ---GHVVLTDFGLCKEGIAQSDTTTTFCGTPEYL 163
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEV++++ + D W +G + Y +L G PF+ + ++ +L R P
Sbjct: 164 APEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGA 219
Query: 340 SNSAKDFVKKLLVKDPRARLTA 361
S +A +++LL KD + RL A
Sbjct: 220 SLTAWSILEELLEKDRQRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 89.7 bits (222), Expect = 2e-19
Identities = 90/338 (26%), Positives = 144/338 (42%), Gaps = 67/338 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG + K G A+K + K +L + V ++ E I
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKE------------QVAHIRAERDI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L G VVK + +F+D +Y+ ME GG+++ +L KKD+ E + +L
Sbjct: 55 LVEADGAW-VVKMFYSFQDKRNLYLIMEFLPGGDMMT-LLMKKDTLSEEATQFYIAETVL 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK------------ 269
+ A H G +HRD+KP+N L + +K +DFGL +K +
Sbjct: 113 AIDA-IHQLGFIHRDIKPDNLLLDAK---GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPP 168
Query: 270 ----FQDI--------------------VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYI 304
FQ++ VG+ Y+APEV + + D WS+GVI Y
Sbjct: 169 SDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228
Query: 305 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA-- 362
+L G PF +T +++V+ K P IS AKD + + D R+ +
Sbjct: 229 MLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGV 287
Query: 363 -QALSHPWVREGGD-------ASEIPIDISVLNNMRQF 392
+ SHP+ EG D + IPI+I +++ F
Sbjct: 288 EEIKSHPFF-EGVDWGHIRERPAAIPIEIKSIDDTSNF 324
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 3e-19
Identities = 80/315 (25%), Positives = 125/315 (39%), Gaps = 63/315 (20%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDVK 156
+ I +G G +G Y A DK G+ VA+KK V + K PI A+
Sbjct: 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKK----------VRLDNEKEGFPITAI---- 54
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV----------YIAMELCEGGELLDRILAKKDS 206
RE+KIL+ L H N+V D Y+ E + L +L
Sbjct: 55 REIKILRQLN-HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHD--LMGLLESGLV 111
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
++E ++Q+L CH +HRD+K N L + + +K DFGL+
Sbjct: 112 HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNS 168
Query: 267 GKK--FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF---------- 312
+ + + V + +Y PE+L + + GP DVWS G I L ++P
Sbjct: 169 EESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT-KKPIFQANQELAQL 227
Query: 313 --------------WDKTEDGIFKEVLRNKPDFRRK---PWPSISNSAKDFVKKLLVKDP 355
W + ++ K +RR+ + I A D + +L DP
Sbjct: 228 ELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP 287
Query: 356 RARLTAAQALSHPWV 370
R TA +AL+ PW+
Sbjct: 288 SKRCTAEEALNSPWL 302
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 87.3 bits (216), Expect = 4e-19
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 57/297 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKILIRVVSFQDLKMILPIAVEDV 155
+T G++LG G +G Y G +AVK++E + +L ++ L+
Sbjct: 2 WTKGEVLGKGAYGTVYCGL-TNQGQLIAVKQVELDTSNVLAAEKEYEKLQ---------- 50
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGG---ELLDRILAKKD---SRYT 209
EV +L++L H N+V++ DDN + I ME GG +L+R + +YT
Sbjct: 51 -EEVDLLKSLK-HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYT 108
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI----- 264
+Q+L A H + +VHRD+K N + + +K DFG + +
Sbjct: 109 --------KQILDGVAYLHNNCVVHRDIKGNNVMLMP---NGIIKLIDFGCARRLAWVGL 157
Query: 265 --KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
+ + G+ Y++APEV+ G +SD+WSIG + + G+ P
Sbjct: 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPL--------- 208
Query: 322 KEVLRNKPDF----RRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ R F R P + S +A DFV L +D R +A Q L H ++
Sbjct: 209 ASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 86.6 bits (214), Expect = 6e-19
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I K +G GQF Y AT + VA+KK+ Q +M+ A +D +
Sbjct: 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKV------------QIFEMMDAKARQDCVK 51
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAV 215
E+ +L+ L H NV+K+ ++F +DN + I +EL + G+L I K+ E+
Sbjct: 52 EIDLLKQL-NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWK 110
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIV 274
Q+ H ++HRD+KP N + +K D GL F +V
Sbjct: 111 YFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLV 167
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 313
G+ YY++PE + +SD+WS+G + Y + + PF+
Sbjct: 168 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 7e-19
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 22/273 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG +A G A KK+EK +I R + M L E +I
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----KGEAMAL--------NEKRI 53
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+ + VV A+E + + + + + GG+L I + + E+ A ++
Sbjct: 54 LEKV-NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELC 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
+ +V+RD+KPEN L + ++ +D GL+ I G+ + VG+ Y+A
Sbjct: 113 CGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMA 169
Query: 282 PEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PEV+ + S D W +G + Y ++ G+ PF + E +EV R + + + S
Sbjct: 170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFS 229
Query: 341 NSAKDFVKKLLVKDPRARL-----TAAQALSHP 368
AK + LL K+P+ RL AA HP
Sbjct: 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 87.6 bits (217), Expect = 1e-18
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE++IL+ H NVVK ++ F+ + + + +E +GG L +A E+ A V
Sbjct: 121 REIEILRD-VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD------EQFLADV 173
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVG 275
RQ+L A H +VHRD+KP N L SAK ++K DFG+S + + VG
Sbjct: 174 ARQILSGIAYLHRRHIVHRDIKPSNLLINSAK---NVKIADFGVSRILAQTMDPCNSSVG 230
Query: 276 SAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPF-------WDKTEDGIFK 322
+ Y++PE + G D+WS+GV GR PF W I
Sbjct: 231 TIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI-- 288
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ P+ + S + F+ L ++P R +A Q L HP++
Sbjct: 289 -CMSQPPE----APATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331
|
Length = 353 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 85.8 bits (212), Expect = 1e-18
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I K +G GQF Y AT +G VA+KK++ + D K A D +
Sbjct: 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQ-------IFDLMDAK-----ARADCIK 51
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAV 215
E+ +L+ L H NV+K+Y +F +DN + I +EL + G+L + + K+ EK
Sbjct: 52 EIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWK 110
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIV 274
Q+ H ++HRD+KP N + +K D GL F +V
Sbjct: 111 YFVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLV 167
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 313
G+ YY++PE + +SD+WS+G + Y + + PF+
Sbjct: 168 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 85.9 bits (212), Expect = 1e-18
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 26/280 (9%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D + +T + +G G FG + D VA+K +I + +D +
Sbjct: 1 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-------IIDLEEAED-------EI 46
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
ED+++E+ +L V K+Y ++ D ++I ME GG LD + + E
Sbjct: 47 EDIQQEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQ 102
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A ++R++L+ H +HRD+K N L E +K DFG++ + + K
Sbjct: 103 IATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRN 159
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
VG+ +++APEV+K+ + ++D+WS+G+ L G P + + + +N P
Sbjct: 160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP 219
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ S K+FV+ L K+P R TA + L H ++
Sbjct: 220 TLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 2e-18
Identities = 80/293 (27%), Positives = 124/293 (42%), Gaps = 58/293 (19%)
Query: 120 NGDRVA-VKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE----NVVKF 174
NG V+ VK I ++ + V K + + RE++I+ HE +V F
Sbjct: 17 NGGSVSKVKHIPTGTVMAKKVVHIGAK---SSVRKQILRELQIM-----HECRSPYIVSF 68
Query: 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL-- 232
Y AF ++N + + ME + G L DRI K + ++L A + GL
Sbjct: 69 YGAFLNENNICMCMEFMDCGSL-DRIY---------KKGGPIPVEILGKIAVAVVEGLTY 118
Query: 233 -------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVA 281
+HRD+KP N L S + +K DFG+S G+ I VG++ Y++
Sbjct: 119 LYNVHRIMHRDIKPSNILVNSRGQ---IKLCDFGVS-----GELINSIADTFVGTSTYMS 170
Query: 282 PEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED--------GIFKEVLR--NKPD 330
PE ++ K +SDVWS+G+ L G+ PF D GI + + +P
Sbjct: 171 PERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP 230
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 383
R P +DFV L+KDP R T Q + P + +D+
Sbjct: 231 -PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA--LRASNVDL 280
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 86.6 bits (214), Expect = 3e-18
Identities = 86/322 (26%), Positives = 133/322 (41%), Gaps = 71/322 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG +A A+K + K +L+R V VK E I
Sbjct: 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRN------------QVAHVKAERDI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A A +E VV+ Y +F+D + +Y M+ GG+++ ++ + + E A + ++
Sbjct: 55 L-AEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELT 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL--------------------- 260
H G +HRD+KP+N L D +K TDFGL
Sbjct: 112 CAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQ 168
Query: 261 -----------------SDFIKP-----GKKFQ-----DIVGSAYYVAPEVLKRKSGPE- 292
D +KP ++ Q +VG+ Y+APEVL R +
Sbjct: 169 DSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 228
Query: 293 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 352
D WS+GVI Y +L G+ PF +T +V+ + P +S A D + K L
Sbjct: 229 CDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIK-LC 287
Query: 353 KDPRARL---TAAQALSHPWVR 371
+ P RL A + +HP+ +
Sbjct: 288 RGPEDRLGKNGADEIKAHPFFK 309
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 86.3 bits (213), Expect = 3e-18
Identities = 87/339 (25%), Positives = 142/339 (41%), Gaps = 63/339 (18%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG + K G A+K + K +L + V ++ E I
Sbjct: 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKE------------QVGHIRAERDI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A VVK + +F+D +Y+ ME GG+++ +L KKD+ TE++ + + +
Sbjct: 55 L-VEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMT-LLMKKDT-LTEEETQFYIAETV 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK------------ 269
H G +HRD+KP+N L S +K +DFGL +K +
Sbjct: 112 LAIDSIHQLGFIHRDIKPDNLLLDSK---GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLP 168
Query: 270 ----FQDI--------------------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYI 304
FQ++ VG+ Y+APEV + D WS+GVI Y
Sbjct: 169 SDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228
Query: 305 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK-DPRARLTAAQ 363
+L G PF +T +K+V+ K P IS AKD + + + + R +
Sbjct: 229 MLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVE 288
Query: 364 ALSHPWVREGGD-------ASEIPIDISVLNNMRQFVKY 395
+ EG D + IPI+I +++ F ++
Sbjct: 289 EIKTNPFFEGVDWEHIRERPAAIPIEIKSIDDTSNFDEF 327
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.9 bits (210), Expect = 3e-18
Identities = 76/276 (27%), Positives = 128/276 (46%), Gaps = 22/276 (7%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG +A G A KK+EK +I R + M L E +I
Sbjct: 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----KGEAMAL--------NEKQI 53
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+ + VV A+E + + + + L GG+L I + + E+ A ++
Sbjct: 54 LEKVNS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEIT 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
+ H +V+RD+KPEN L + ++ +D GL+ I G+ + VG+ Y+A
Sbjct: 113 CGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGLAVEIPEGETIRGRVGTVGYMA 169
Query: 282 PEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PEV+K + D W +G + Y ++ G+ PF + E +EV R + + + S
Sbjct: 170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFS 229
Query: 341 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 371
+A+ ++LL KDP RL A + +HP+ R
Sbjct: 230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR 265
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 85.5 bits (211), Expect = 4e-18
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 36/239 (15%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYT 209
V+ E + + + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+
Sbjct: 42 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 101
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGK 268
+ ++ + + H G+++RD+K +N L S + +K TD+G+ + ++PG
Sbjct: 102 SAEISLALNYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGD 151
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTED 318
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF TED
Sbjct: 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 211
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 371
+F+ +L + R S+S A +K L KDP+ RL A HP+ R
Sbjct: 212 YLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 85.9 bits (212), Expect = 4e-18
Identities = 91/328 (27%), Positives = 139/328 (42%), Gaps = 67/328 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D G VAVKK+ + FQ+ +
Sbjct: 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR--------PFQN-----QTHAKRA 67
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L+ + H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 68 YRELVLLKCV-NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHMELD---- 121
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 122 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFM 178
Query: 270 FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV L D+WS+G I L+ G F W+K + +
Sbjct: 179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 238
Query: 321 ----------FKEVLR----NKPD---------FRRKPWPSIS-------NSAKDFVKKL 350
+ +R N+P F +PS S + A+D + K+
Sbjct: 239 GTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKM 298
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASE 378
LV DP R++ +AL HP++ D +E
Sbjct: 299 LVIDPDKRISVDEALRHPYITVWYDPAE 326
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 5e-18
Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
+GK+ G G F A + G A+K ++K+ F+ L+ + + RE+
Sbjct: 4 LGKI-GEGTFSEVLKAQSRKTGKYYAIKCMKKH--------FKSLEQVNNL------REI 48
Query: 160 KILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAV 215
+ L+ L+ H N+++ D + + EL + L + I K + EK
Sbjct: 49 QALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELI---KGRKRPLPEKRVKS 104
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ Q+L+ H +G+ HRD+KPEN L K D LK DFG I + + +
Sbjct: 105 YMYQLLKSLDHMHRNGIFHRDIKPENILIK----DDILKLADFGSCRGIYSKPPYTEYIS 160
Query: 276 SAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL---RN 327
+ +Y APE L GP+ D+W++G + + +L F E D I K +VL
Sbjct: 161 TRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDA 220
Query: 328 KPDFRRKPW-------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+ + + P+ S D +KKLL DP R+TA QAL HP
Sbjct: 221 EVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP 280
Query: 369 W 369
+
Sbjct: 281 Y 281
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 85.1 bits (210), Expect = 6e-18
Identities = 88/333 (26%), Positives = 138/333 (41%), Gaps = 75/333 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQN-----QTHAKRA 63
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VY+ MEL + L I + D
Sbjct: 64 YREL-VLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMELD---- 117
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 174
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I IL GR W+K +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----V 230
Query: 321 FKEVLRNKPDFRRKPWPSISN----------------------------------SAKDF 346
+++ P+F +K P++ N A+D
Sbjct: 231 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+ K+LV DP R++ +AL HP++ D +E+
Sbjct: 291 LSKMLVIDPAKRISVDEALQHPYINVWYDPAEV 323
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 6e-18
Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 23/262 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG +A K++G AVK ++K IL + ++ I+ E +
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKK----KEQNHIMA--------ERNV 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H +V + +F+ +Y ++ GGEL + +++ + E A ++
Sbjct: 49 LLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHL--QRERCFLEPRARFYAAEVA 106
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYV 280
H +++RD+KPEN L S + TDFGL + ++P + G+ Y+
Sbjct: 107 SAIGYLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGVEPEETTSTFCGTPEYL 163
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APEVL+++ + D W +G + Y +L G PF+ + ++ +L
Sbjct: 164 APEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGK 219
Query: 340 SNSAKDFVKKLLVKDPRARLTA 361
+ +A D + LL KD R RL A
Sbjct: 220 TVAACDLLVGLLHKDQRRRLGA 241
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 84.7 bits (209), Expect = 1e-17
Identities = 87/329 (26%), Positives = 133/329 (40%), Gaps = 69/329 (20%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG G FG +A A+K + K +L R V VK E I
Sbjct: 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRN------------QVAHVKAERDI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A A +E VVK Y +F+D + +Y M+ GG+++ ++ + + E A + ++
Sbjct: 55 L-AEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELT 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL--------------------S 261
H G +HRD+KP+N L D +K TDFGL
Sbjct: 112 LAIESVHKMGFIHRDIKPDNILIDL---DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQ 168
Query: 262 DFIKPGKKFQDI----------------------------VGSAYYVAPEVLKRKSGPE- 292
D ++P + D+ VG+ Y+APEVL RK +
Sbjct: 169 DSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL 228
Query: 293 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL- 351
D WS+GVI + +L G+ PF T +V+ + P +S A D + KL
Sbjct: 229 CDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCC 288
Query: 352 -VKDPRARLTAAQALSHPWVREGGDASEI 379
++ R A +HP+ E +S+I
Sbjct: 289 SAEERLGRNGADDIKAHPFFSEVDFSSDI 317
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 1e-17
Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 54/302 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY I +L+G G G Y+A D RVA+KKI ++ + LK +
Sbjct: 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIRED-----LSENPLLK-------KRFL 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAA 214
RE KI L H +V Y+ D + VY M EG L L + + +K+S E
Sbjct: 51 REAKIAADLI-HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEK 109
Query: 215 VVVRQMLRV-------AAECHLHGLVHRDMKPENFL----------------FKSAKED- 250
V L + H G++HRD+KP+N L FK +E+
Sbjct: 110 TSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEED 169
Query: 251 -SSLKATDFGL--SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 306
+ + + S PGK IVG+ Y+APE L ES D++++GVI Y +L
Sbjct: 170 LLDIDVDERNICYSSMTIPGK----IVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225
Query: 307 CGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 363
P+ + + G +++V+ + + P+ I K L DP R ++ Q
Sbjct: 226 TLSFPY--RRKKGRKISYRDVILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQ 281
Query: 364 AL 365
L
Sbjct: 282 EL 283
|
Length = 932 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 83.9 bits (207), Expect = 1e-17
Identities = 83/320 (25%), Positives = 136/320 (42%), Gaps = 58/320 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
RY +G G +G A D +VAVKK+ + FQ L I
Sbjct: 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSR--------PFQSL-----IHARRT 61
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+++L+ + HENV+ + F E+ N VY+ L G L+ I+ K + +
Sbjct: 62 YRELRLLKHMK-HENVIGLLDVFTPATSIENFNEVYLVTNLM--GADLNNIV--KCQKLS 116
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
++ ++ Q+LR H G++HRD+KP N + ED L+ DFGL+ + +
Sbjct: 117 DEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QADDE 171
Query: 270 FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR- 326
V + +Y APE++ D+WS+G I LL G+ F K ++
Sbjct: 172 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231
Query: 327 ---NKPDFRRK--------------PWPSISNS---------AKDFVKKLLVKDPRARLT 360
P+ +K P A D ++K+LV D R++
Sbjct: 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS 291
Query: 361 AAQALSHPWVREGGDASEIP 380
A++AL+HP+ + D + P
Sbjct: 292 ASEALAHPYFSQYHDPEDEP 311
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 82.8 bits (204), Expect = 2e-17
Identities = 72/284 (25%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D + +T + +G G FG + D VA+K I+ + +D +
Sbjct: 1 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-------ED-------EI 46
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
ED+++E+ +L V K+Y ++ ++I ME GG LD + A + E
Sbjct: 47 EDIQQEITVLSQ-CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA---GPFDEFQ 102
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQ 271
A +++++L+ H +HRD+K N L E +K DFG++ + + K
Sbjct: 103 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRN 159
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
VG+ +++APEV+++ + ++D+WS+G+ L G P D + + +N P
Sbjct: 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP- 218
Query: 331 FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
P++ S K+F+ L KDP R TA + L H ++
Sbjct: 219 ------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI 256
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 83.5 bits (206), Expect = 2e-17
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 23/263 (8%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG +A K + A+K ++K+ V QD VE E ++L
Sbjct: 7 VLGKGSFGKVMLAERKGTDELYAIKILKKD------VVIQDDD------VECTMVEKRVL 54
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
+ + ++ F+ + +Y ME GG+L+ I ++ ++ E A ++
Sbjct: 55 ALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISV 112
Query: 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVA 281
H G+++RD+K +N + S + +K DFG+ + + G + G+ Y+A
Sbjct: 113 GLFFLHRRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIA 169
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S
Sbjct: 170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLS 225
Query: 341 NSAKDFVKKLLVKDPRARLTAAQ 363
A K L+ K P RL
Sbjct: 226 KEAVSICKGLMTKHPSKRLGCGP 248
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 85.3 bits (211), Expect = 2e-17
Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 44/297 (14%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
K+ ++Y I ++LG G G A ++G+ AVK + D++ +
Sbjct: 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVV-------------DMEGMSEA 73
Query: 151 AVEDVKREVKIL------QALAGHENVVKFYNAFEDDNYVYIAMEL--CEGGELLDRI-- 200
+ EV L + HE+ K + +N + IA+ L G+L I
Sbjct: 74 DKNRAQAEVCCLLNCDFFSIVKCHEDFAK-KDPRNPENVLMIALVLDYANAGDLRQEIKS 132
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
AK + + E +A ++ Q+L H ++HRD+K N L S + +K DFG
Sbjct: 133 RAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLGDFGF 189
Query: 261 SDFIKP------GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 313
S G+ F G+ YYVAPE+ +RK ++D++S+GV+ Y LL +RPF
Sbjct: 190 SKMYAATVSDDVGRTF---CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPF- 245
Query: 314 DKTEDGI-FKEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
DG +EV+ R P P SIS ++ V LL DP+ R ++++ L+ P
Sbjct: 246 ----DGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 83.1 bits (205), Expect = 2e-17
Identities = 70/261 (26%), Positives = 126/261 (48%), Gaps = 25/261 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+LG G FG +A K + A+K ++K+ V QD VE E ++
Sbjct: 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKD------VVIQDDD------VECTMVEKRV 53
Query: 162 LQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
L AL+G + + ++ F+ + +Y ME GG+L+ +I ++ R+ E A ++
Sbjct: 54 L-ALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQI--QQVGRFKEPHAVFYAAEI 110
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYY 279
H G+++RD+K +N + S + +K DFG+ + + G + G+ Y
Sbjct: 111 AIGLFFLHSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENMWDGVTTKTFCGTPDY 167
Query: 280 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S
Sbjct: 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----S 223
Query: 339 ISNSAKDFVKKLLVKDPRARL 359
+S A K L+ K P RL
Sbjct: 224 MSKEAVAICKGLMTKHPGKRL 244
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 81.6 bits (201), Expect = 3e-17
Identities = 75/282 (26%), Positives = 135/282 (47%), Gaps = 39/282 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + + +G G +G Y A + G+ AVK +I++ D +I ++
Sbjct: 11 YELIQRVGSGTYGDVYKARNLHTGELAAVK-------IIKLEPGDDFSLI--------QQ 55
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ +++ H N+V ++ ++ ++I ME C GG L D + +E A V
Sbjct: 56 EIFMVKECK-HCNIVAYFGSYLSREKLWICMEYCGGGSLQD--IYHVTGPLSELQIAYVC 112
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGS 276
R+ L+ A H G +HRD+K N L ++ +K DFG++ I K + +G+
Sbjct: 113 RETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITATIAKRKSFIGT 169
Query: 277 AYYVAPEV--LKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 331
Y++APEV +++ G D+W++G+ L + P +D +F L +K +F
Sbjct: 170 PYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMSKSNF 226
Query: 332 R------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + W S++ +FVK L K+P+ R TA + L+H
Sbjct: 227 QPPKLKDKTKW---SSTFHNFVKISLTKNPKKRPTAERLLTH 265
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-17
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 67/328 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + FQ+ +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQN-----QTHAKRA 70
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +L H+N++ N F E+ VYI MEL + L I + D
Sbjct: 71 YREL-VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELD---- 124
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 181
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI 320
V + YY APEV+ E+ D+WS+G I ++ G F W+K + +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 321 --------------FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKL 350
+ + N+P + K +P + ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASE 378
LV D R++ +AL HP++ D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 6e-17
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 63/261 (24%)
Query: 157 REVKILQALAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
RE+K+L HE +V FY AF D + I ME +GG LD++L KK R E
Sbjct: 48 RELKVL-----HECNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPENI 100
Query: 213 AAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ +LR +L H ++HRD+KP N L S E +K DFG+S G+
Sbjct: 101 LGKISIAVLR--GLTYLREKHKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQL 150
Query: 270 FQDI----VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP------------F 312
+ VG+ Y++PE L+ +SD+WS+G+ + GR P F
Sbjct: 151 IDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMF 210
Query: 313 WDKTEDGIFKEVLR----NKPDFRR-------------KPWPSI-----SNSAKDFVKKL 350
+G KE R + PD R +P P + S+ +DFV K
Sbjct: 211 GRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKC 270
Query: 351 LVKDPRARLTAAQALSHPWVR 371
L K+P+ R + HP+++
Sbjct: 271 LKKNPKERADLKELTKHPFIK 291
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 80.8 bits (199), Expect = 7e-17
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 50/303 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
++ + ++G G +G K + VA+KK + ++ +++K E
Sbjct: 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE------ENEEVK-------ETTL 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+K+L+ L EN+V+ AF +Y+ E E L +L + + +
Sbjct: 49 RELKMLRTLK-QENIVELKEAFRRRGKLYLVFEYVEKNML--ELLEEMPNGVPPEKVRSY 105
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIV 274
+ Q+++ CH + +VHRD+KPEN L + LK DFG + + G + + V
Sbjct: 106 IYQLIKAIHWCHKNDIVHRDIKPENLLISH---NDVLKLCDFGFARNLSEGSNANYTEYV 162
Query: 275 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------- 322
+ +Y +PE +L G D+WS+G I L G+ F ++E D +F
Sbjct: 163 ATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPA 222
Query: 323 ---EVLRNKPDFRRKPWPSISNSAK--------------DFVKKLLVKDPRARLTAAQAL 365
++ + P F +P++++ D +K LL +P R Q L
Sbjct: 223 EQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282
Query: 366 SHP 368
+HP
Sbjct: 283 NHP 285
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 9e-17
Identities = 46/152 (30%), Positives = 91/152 (59%), Gaps = 12/152 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 522
+G +DF EF+ TL ++++ DSE+ ++ AF+ FD D +GFI+ ELR + G
Sbjct: 60 GNGTIDFPEFL--TLMARKMKDTDSEE-EIKE--AFKVFDRDGNGFISAAELRHVMTNLG 114
Query: 523 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 551
K + +D ++ EAD+D DG+I+ EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146
|
Length = 149 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 2e-16
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E + Q + + N +K Y + + M+ + G+L D L KK+ + +E + ++
Sbjct: 58 EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD--LLKKEGKLSEAEVKKII 115
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGS 276
RQ++ + H H ++H D+K EN L+ AK+ + D+GL I P D G+
Sbjct: 116 RQLVEALNDLHKHNIIHNDIKLENVLYDRAKD--RIYLCDYGLCKIIGTPSC--YD--GT 169
Query: 277 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y +PE +K + S D W++GV+TY LL G+ PF + ++ + E L + +
Sbjct: 170 LDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF 229
Query: 336 WPSISNSAKDFVKKLLVKDPRARLT 360
++S +A DFV+ +L + RLT
Sbjct: 230 IKNVSKNANDFVQSMLKYNINYRLT 254
|
Length = 267 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 4e-16
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 25/278 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG +A G A KK+ K ++ R E E +IL
Sbjct: 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRK------------GYEGAMVEKRIL- 47
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQML 221
A +V AF+ + + M + GG+L I + +++ + E A Q++
Sbjct: 48 AKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQII 107
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYV 280
H +++RD+KPEN L D +++ +D GL+ +K G+ K + G+ ++
Sbjct: 108 SGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFM 164
Query: 281 APEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339
APE+L+ + S D +++GV Y ++ R PF + E KE+ + +
Sbjct: 165 APELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKF 224
Query: 340 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
S ++K F + LL KDP RL +HP R+
Sbjct: 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 5e-16
Identities = 80/322 (24%), Positives = 133/322 (41%), Gaps = 71/322 (22%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG + K G A+K + K++ M + VK E +
Sbjct: 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE------------MFKKDQLAHVKAERDV 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L A + VV Y +F+D Y+Y+ ME GG+L+ +L K D+ ++E + + +
Sbjct: 55 L-AESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMT-MLIKYDT-FSEDVTRFYMAECV 111
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------------- 261
H G +HRD+KP+N L +K +DFGLS
Sbjct: 112 LAIEAVHKLGFIHRDIKPDNILIDR---GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKS 168
Query: 262 -----------------------DFIKPGKKFQDI-----VGSAYYVAPEV-LKRKSGPE 292
D I KK + + VG+ Y+APE+ L++ G E
Sbjct: 169 NKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE 228
Query: 293 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 352
D WS+G I + L G PF + +++++ + +S A+D +++L+
Sbjct: 229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT 288
Query: 353 KDPRARL---TAAQALSHPWVR 371
+ RL A + SHP+ R
Sbjct: 289 -NAENRLGRGGAHEIKSHPFFR 309
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 9e-16
Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
V+ E + + + + +V ++ F+ + +++ +E GG+L+ + ++ + E+ A
Sbjct: 42 VQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHM--QRQRKLPEEHAR 99
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDI 273
++ H G+++RD+K +N L D +K TD+G+ + + PG
Sbjct: 100 FYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMCKEGLGPGDTTSTF 156
Query: 274 VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD--------KTEDGIFKEV 324
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF D TED +F+ +
Sbjct: 157 CGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF-DIITDNPDMNTEDYLFQVI 215
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
L R +S A +K L KDP+ RL
Sbjct: 216 LEKPIRIPR----FLSVKASHVLKGFLNKDPKERL 246
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 76.9 bits (189), Expect = 1e-15
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 27/278 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y +++G G +G + + +G + +KK+ +R S ++ K ++
Sbjct: 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLN-----LRNASRRERKA--------AEQ 48
Query: 158 EVKILQALAGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E ++L L H N+V + ++E +D +YI M CEGG+L ++ +K E
Sbjct: 49 EAQLLSQLK-HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEW 107
Query: 217 VRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-IV 274
Q+ H ++HRD+K +N FL ++ + +K D G++ ++ ++
Sbjct: 108 FVQIAMALQYLHEKHILHRDLKTQNVFLTRT----NIIKVGDLGIARVLENQCDMASTLI 163
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-PDFR 332
G+ YY++PE+ K +SDVW++G Y + + F K + + ++ K P
Sbjct: 164 GTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMP 223
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
+ P + + + +L K P R + L P++
Sbjct: 224 KDYSPELG----ELIATMLSKRPEKRPSVKSILRQPYI 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 1e-15
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 38/277 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG K G A KK++K R+ KM L E +IL+
Sbjct: 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKK----RLKKKSGEKMAL--------LEKEILE 48
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ +V AFE ++ + M L GG+L I Y + + + +++
Sbjct: 49 KVNS-PFIVNLAYAFESKTHLCLVMSLMNGGDLKYHI-------YNVGERGLEMERVIHY 100
Query: 224 AAEC-----HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+A+ HLH +V+RDMKPEN L + + + +D GL+ +K GK G+
Sbjct: 101 SAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAGT 157
Query: 277 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDF 331
Y+APE+LK + D +++G Y ++ GR PF D E + + + L ++ F
Sbjct: 158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF 217
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+ + + +KD + L K P RL + + P
Sbjct: 218 EHQ---NFTEESKDICRLFLAKKPEDRLGSREKNDDP 251
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.7 bits (192), Expect = 1e-15
Identities = 87/334 (26%), Positives = 128/334 (38%), Gaps = 80/334 (23%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
+Y I +G G +G Y A K G A+KK + +K +S A
Sbjct: 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGIS--------QSAC-- 50
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKD 212
RE+ +L+ L HENVV F + VY+ + E +L I K R +
Sbjct: 51 --REIALLRELK-HENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQII---KFHR--QAK 101
Query: 213 AAVVVRQMLRVAAECHLHGL--------VHRDMKPENFLFKS-AKEDSSLKATDFGLSD- 262
+ M++ L+G+ +HRD+KP N L E +K D GL+
Sbjct: 102 RVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161
Query: 263 FIKPGKKFQD---IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE 317
F P K D +V + +Y APE+L R D+W+IG I LL F +
Sbjct: 162 FNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221
Query: 318 D-------------GIFK-----------------EVLRNKPDFRRKPWPS--------- 338
IF+ E DF+ K +PS
Sbjct: 222 KIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEK 281
Query: 339 -ISNSAK--DFVKKLLVKDPRARLTAAQALSHPW 369
++ D ++KLL DP R+TA +AL HP+
Sbjct: 282 HKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 2e-15
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HL 229
+V +F+ +Y+ + GGEL + +++ R+ A ++L A E H
Sbjct: 55 IVPLKFSFQSPEKLYLVLAFINGGELFHHL--QREGRFDLSRARFYTAELL-CALENLHK 111
Query: 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRK 288
+++RD+KPEN L + DFGL +K K G+ Y+APE+L
Sbjct: 112 FNVIYRDLKPENILLDYQ---GHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGH 168
Query: 289 SGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAK 344
++ D W++GV+ Y +L G PF+D+ + +++++L+ PD AK
Sbjct: 169 GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD-------GFDRDAK 221
Query: 345 DFVKKLLVKDPRARL---TAAQALSHPW 369
D + LL +DP RL A + +HP+
Sbjct: 222 DLLIGLLSRDPTRRLGYNGAQEIKNHPF 249
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 78.6 bits (193), Expect = 4e-15
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 61/313 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--------EKNKILIRVVSFQDLKMILP 149
Y + K +G+G+FG ++ K + K I EK++++I V
Sbjct: 15 YEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEV----------- 63
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILA--KKD 205
+V RE+K H+N+V++ + F + + +YI ME C+ G+L I K
Sbjct: 64 ----NVMRELK-------HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMF 112
Query: 206 SRYTEKDAAVVVRQMLRVAAECHL-------HGLVHRDMKPENFLF--------KSAKED 250
+ E + RQ+L A CH ++HRD+KP+N K +
Sbjct: 113 GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA 172
Query: 251 SSL------KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP---ESDVWSIGVI 301
++L K DFGLS I VG+ YY +PE+L ++ +SD+W++G I
Sbjct: 173 NNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCI 232
Query: 302 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 361
Y L G+ PF L+ PD P S +K LL + R +A
Sbjct: 233 IYELCSGKTPFHKANNFSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSA 289
Query: 362 AQALSHPWVREGG 374
Q L + ++ G
Sbjct: 290 LQCLGYQIIKNVG 302
|
Length = 1021 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 6e-15
Identities = 80/287 (27%), Positives = 118/287 (41%), Gaps = 47/287 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G G +AVK+I V+ Q+ K +L ++ I
Sbjct: 9 LGRGAYGVVDKMRHVPTGTIMAVKRIRAT------VNSQEQKRLL--------MDLDISM 54
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDA----AVVV 217
V FY A + V+I ME+ + LD+ K +D AV +
Sbjct: 55 RSVDCPYTVTFYGALFREGDVWICMEVMDTS--LDKFYKKVYDKGLTIPEDILGKIAVSI 112
Query: 218 RQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+ L +LH ++HRD+KP N L + +K DFG+S + K D
Sbjct: 113 VKALE-----YLHSKLSVIHRDVKPSNVL---INRNGQVKLCDFGISGYLVDSVAKTIDA 164
Query: 274 VGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVL 325
G Y+APE + + + SDVWS+G IT I L GR P+ W KT K+V+
Sbjct: 165 -GCKPYMAPERINPELNQKGYDVKSDVWSLG-ITMIELATGRFPYDSW-KTPFQQLKQVV 221
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ P S +DFV K L K+ + R + L HP+
Sbjct: 222 EEPSP--QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 1e-14
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 26/234 (11%)
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
V+ E + + + H +V ++ F+ ++ ++ +E GG+L+ + ++ + E+ A
Sbjct: 42 VQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHM--QRQRKLPEEHAR 99
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDI 273
++ H G+++RD+K +N L + + +K TD+G+ + I+PG
Sbjct: 100 FYSAEISLALNFLHERGIIYRDLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTTSTF 156
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKE 323
G+ Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+
Sbjct: 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV 216
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 371
+L + R S+S A +K L KDP+ RL SHP+ R
Sbjct: 217 ILEKQIRIPR----SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 74.2 bits (182), Expect = 1e-14
Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 54/300 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G Y A D +G VA+K + RV + +D LP++ REV +L+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSV-------RVQTNEDG---LPLST---VREVALLK 54
Query: 164 ALAG--HENVVKFYNA-----FEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAA 214
L H N+V+ + + + V + E + LD++ T KD
Sbjct: 55 RLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKD-- 112
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
++RQ LR H + +VHRD+KPEN L S +K DFGL+ +V
Sbjct: 113 -LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVV 168
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW------DK-----------T 316
+ +Y APEVL + + D+WS+G I + + R+P + D+
Sbjct: 169 VTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 227
Query: 317 EDGIFKEVLRNKPDFR-RKPW------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
ED ++V + F R P P I S + ++L +P R++A +AL HP+
Sbjct: 228 EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 3e-14
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 394 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
K S L F + L +E++ +L++ F D D +G I E+ + L + L + E+
Sbjct: 4 KISDLLTF------TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEA 56
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 512
+ ++ + ID + VDF EF+ ++ + + ++ + + AF+ FD D DG+I
Sbjct: 57 EINKLFEEIDAGNET-VDFPEFLTVMSVKLKRGDKEEELRE------AFKLFDKDHDGYI 109
Query: 513 TPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 550
+ ELR G ++ LL+E D D DG I EF++L
Sbjct: 110 SIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKL 153
|
Length = 160 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 7e-14
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV +L+ L H N+V ++ + + + E + L + L + + + +
Sbjct: 52 REVSLLKNLK-HANIVTLHDIIHTERCLTLVFEYLDSD--LKQYLDNCGNLMSMHNVKIF 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVG 275
+ Q+LR + CH ++HRD+KP+N L E LK DFGL+ P K + + V
Sbjct: 109 MFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVV 165
Query: 276 SAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------ 326
+ +Y P+VL S P D+W +G I Y + GR F T + R
Sbjct: 166 TLWYRPPDVLLGSTEYSTP-IDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPT 224
Query: 327 ----------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 366
P +R +P P + D + LL+ + ++R++A AL
Sbjct: 225 EETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284
Query: 367 HPW 369
H +
Sbjct: 285 HSY 287
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 7e-14
Identities = 78/313 (24%), Positives = 119/313 (38%), Gaps = 82/313 (26%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK----REV 159
LG G + Y K G VA+K+I E RE
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALKEIRLE------------------HEEGAPFTAIREA 54
Query: 160 KILQALAGHENVVKFYNAFEDD---NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+L+ L H N+V ++ V+ E LD L +Y + +
Sbjct: 55 SLLKDLK-HANIVTLHDIIHTKKTLTLVF---------EYLDTDL----KQYMDDCGGGL 100
Query: 217 ----VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PG 267
VR Q+LR A CH ++HRD+KP+N L E LK DFGL+ P
Sbjct: 101 SMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSVPS 157
Query: 268 KKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-----DGI 320
K + + V + +Y P+VL + D+W +G I Y + GR F T+ I
Sbjct: 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKI 217
Query: 321 FK-----------EVLRNK-------PDFRRKP----WPSIS--NSAKDFVKKLLVKDPR 356
F+ V N P + +P P + ++ K L +P+
Sbjct: 218 FRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPK 277
Query: 357 ARLTAAQALSHPW 369
R++AA+A+ HP+
Sbjct: 278 KRISAAEAMKHPY 290
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 8e-14
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 36/294 (12%)
Query: 112 TYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE-DVKREVKILQALAGHEN 170
TY+ DK A ++K+ +V+ +++++ REV +L+ L H N
Sbjct: 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HAN 65
Query: 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 230
+V ++ + + + E + + L + L + + + + Q+LR CH
Sbjct: 66 IVTLHDIIHTEKSLTLVFEYLD--KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123
Query: 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVL--KR 287
++HRD+KP+N L E LK DFGL+ P K + + V + +Y P++L
Sbjct: 124 KVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST 180
Query: 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------- 326
+ D+W +G I Y + GR F T + + R
Sbjct: 181 DYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240
Query: 327 -NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
N P +R P + + + + KLL + R R++A +A+ HP+ G+
Sbjct: 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 2e-13
Identities = 81/301 (26%), Positives = 131/301 (43%), Gaps = 55/301 (18%)
Query: 104 LGHGQFGYTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+G G +G + A D NG R VA+K+ V Q + +P++ REV +L
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKR----------VRVQTGEEGMPLST---IREVAVL 55
Query: 163 QALAG--HENVVKFYNA-----FEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDA 213
+ L H NVV+ ++ + + + + E + LD++ T KD
Sbjct: 56 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD- 114
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +
Sbjct: 115 --MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSV 169
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-----GIF------ 321
V + +Y APEVL + S D+WS+G I + + R+P + + D I
Sbjct: 170 VVTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLP 228
Query: 322 ------KEVLRNKPDFRRKPW-------PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
++V + F K I KD + K L +P R++A ALSHP
Sbjct: 229 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 288
Query: 369 W 369
+
Sbjct: 289 Y 289
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 2e-13
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 36/261 (13%)
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV +L+ L H N+V ++ D + + E + L + + + + + +
Sbjct: 53 REVSLLKDLK-HANIVTLHDIVHTDKSLTLVFEYLDKD--LKQYMDDCGNIMSMHNVKIF 109
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVG 275
+ Q+LR A CH ++HRD+KP+N L E LK DFGL+ P K + + V
Sbjct: 110 LYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVV 166
Query: 276 SAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------- 326
+ +Y P+VL S + D+W +G I + + GR F T + + R
Sbjct: 167 TLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTE 226
Query: 327 ---------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
N P ++ +P P + + + K L + + R++A +A+ H
Sbjct: 227 ETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286
Query: 368 PWVRE-GGDASEIPIDISVLN 387
+ R G +P IS+ +
Sbjct: 287 AYFRSLGTRIHSLPESISIFS 307
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 3e-13
Identities = 77/292 (26%), Positives = 115/292 (39%), Gaps = 55/292 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE---DVKREVK 160
LGHG G Y A +AVK I L I VE + E++
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVIP-----------------LDITVELQKQIMSELE 51
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
IL ++ FY AF +N + I E +GG L + K + A VV+ +
Sbjct: 52 ILYKCDS-PYIIGFYGAFFVENRISICTEFMDGGSL--DVYRKIPEHVLGRIAVAVVKGL 108
Query: 221 LRVAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGS 276
+L L +HRD+KP N L + + +K DFG+S + K + VG+
Sbjct: 109 ------TYLWSLKILHRDVKPSNMLVNTRGQ---VKLCDFGVSTQLVNSIAKTY---VGT 156
Query: 277 AYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP------ 329
Y+APE + + G SDVWS+G+ L GR P+ I K P
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ-----IQKNQGSLMPLQLLQC 211
Query: 330 ----DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
D P S F+ + + K P+ R + HP++ + D +
Sbjct: 212 IVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 5e-13
Identities = 70/239 (29%), Positives = 96/239 (40%), Gaps = 53/239 (22%)
Query: 102 KLLGHGQFGYTYVAT------DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
LG G FG Y T + RVAVK + K Q+ K L A
Sbjct: 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD------QEKKEFLKEAH--- 51
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAA 214
L + H N+VK + YI MEL EGG+LL + A+ +
Sbjct: 52 ------LMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTL 105
Query: 215 VVVRQM-LRVAAECH----LHGLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPG 267
+ + L VA C +H +HRD+ N L D+ +K DFGL+
Sbjct: 106 KELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA------ 158
Query: 268 KKFQDIVGSAYY------------VAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 312
+DI S YY +APE L K +SDVWS GV+ + IL G++P+
Sbjct: 159 ---RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY 214
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 7e-13
Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 40/285 (14%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+G G FG K +G +AVK+I V ++ K +L ++ ++
Sbjct: 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRST------VDEKEQKRLL--------MDLDVV 56
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTE----KDAAVV 216
+ +VKFY A + +I MEL + + + S E K A
Sbjct: 57 MRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVAT 116
Query: 217 VRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQD 272
V+ A +L ++HRD+KP N L + ++K DFG+S + K +D
Sbjct: 117 VK------ALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVDSIAKTRD 167
Query: 273 IVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLR 326
G Y+APE + + SDVWS+G+ Y + G+ P+ W+ D + + V
Sbjct: 168 -AGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG 226
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ P S S +F+ L+KD R + L HP+++
Sbjct: 227 DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIK 271
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 8e-13
Identities = 63/243 (25%), Positives = 90/243 (37%), Gaps = 58/243 (23%)
Query: 95 DRRYTIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
R K LG G FG Y G++VAVK +
Sbjct: 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNH--------------SGEEQ 48
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIAMELCEGGELLD-------RIL 201
D +RE++IL+ L HEN+VK+ E + + ME G L D +I
Sbjct: 49 HRSDFEREIEILRTLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQIN 107
Query: 202 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
K+ ++ Q+ + +HRD+ N L +S + +K +DFGL+
Sbjct: 108 LKRLLLFSS--------QICKGMDYLGSQRYIHRDLAARNILVES---EDLVKISDFGLA 156
Query: 262 DFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITYILLCGR 309
+ K + YYV APE L+ K SDVWS GV Y L
Sbjct: 157 KVLPEDKDY-------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYG 209
Query: 310 RPF 312
P
Sbjct: 210 DPS 212
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 9e-13
Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 42/240 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
T K LG GQFG V K G VA+K I + + + +D
Sbjct: 7 TFLKELGSGQFGV--VHLGKWRGKIDVAIKMIREGAM----------------SEDDFIE 48
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK--DAAV 215
E K++ L+ H N+V+ Y ++I E G LL+ + +K TE D
Sbjct: 49 EAKVMMKLS-HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCS 107
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGK 268
V + + +G +HRD+ N L ED+ +K +DFGL+ ++ G
Sbjct: 108 DVCEAMEYLES---NGFIHRDLAARNCL---VGEDNVVKVSDFGLARYVLDDQYTSSQGT 161
Query: 269 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 326
KF + PEV + +SDVWS GV+ + + G+ P+ + + + V
Sbjct: 162 KF-----PVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA 216
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 9e-13
Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 44/297 (14%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
T YD +F R + GK LG G FG AT A G + K+ +++V
Sbjct: 22 TQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEAT--AYG-------LSKSDAVMKVA--- 69
Query: 143 DLKMILPIAVEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD 198
+KM+ P A + E+KI+ L HEN+V A + + E C G+LL+
Sbjct: 70 -VKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLN 128
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ K++S T +D Q+ + A +HRD+ N L K +K DF
Sbjct: 129 FLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK---IVKICDF 185
Query: 259 GLSDFIKPGKKFQDIV-GSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRP 311
GL+ I + +V G+A ++APE + ESDVWS G++ + I G P
Sbjct: 186 GLARDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNP 243
Query: 312 FWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 363
+ D F ++++ +P+ I + D DP R T Q
Sbjct: 244 YPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDA-------DPLKRPTFKQ 293
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 9e-13
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 56/240 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++ + E +K L+ V + ++ A +D +RE ++L
Sbjct: 13 LGEGAFGKVFLGE-------CYHLEPENDKELVAVKTLKE--TASNDARKDFEREAELLT 63
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD---------RILAKKDSRYTEKDAA 214
HEN+VKFY + + + E E G+L L DS E
Sbjct: 64 NF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE---- 118
Query: 215 VVVRQMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+L++A + +L VHRD+ N L D +K DFG+S
Sbjct: 119 LTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCL---VGYDLVVKIGDFGMS------ 169
Query: 268 KKFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 313
+D+ + YY + PE ++ RK ESDVWS GV+ + I G++P++
Sbjct: 170 ---RDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 2e-12
Identities = 74/279 (26%), Positives = 114/279 (40%), Gaps = 56/279 (20%)
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
I P + RE+++L +V FY AF D + I ME +GG LD++L KK
Sbjct: 42 IKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAG 98
Query: 207 RYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R E+ ++ V + L E H ++HRD+KP N L S E +K DFG+S
Sbjct: 99 RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQ 153
Query: 264 IKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP----------- 311
+ VG+ Y++PE L+ +SD+WS+G+ + GR P
Sbjct: 154 LIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL 212
Query: 312 -FWDKTEDGIFKEVLRNKPDFRRKP----------------------------WPSISNS 342
F E + +P +P PS
Sbjct: 213 MFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFG 272
Query: 343 A--KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
A +DFV K L+K+P R Q + H +++ +A E+
Sbjct: 273 AEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SEAEEV 310
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 68.2 bits (166), Expect = 2e-12
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
I P + RE+++L +V FY AF D + I ME +GG LD++L K+
Sbjct: 42 IKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KEAK 98
Query: 207 RYTEKDAAVVVRQMLR-VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
R E+ V +LR +A H ++HRD+KP N L S E +K DFG+S +
Sbjct: 99 RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI 155
Query: 266 PGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 311
VG+ Y++PE L+ +SD+WS+G+ L GR P
Sbjct: 156 DSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 2e-12
Identities = 68/318 (21%), Positives = 119/318 (37%), Gaps = 72/318 (22%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
IGK + +A K VAVKKI + S +DLK++ ++
Sbjct: 4 TLIGKCFEDLMIVH--LAKHKPTNTLVAVKKIN-----LDSCSKEDLKLL--------QQ 48
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E+ + L H N++ + +F D+ +Y+ L G D + + + E + +
Sbjct: 49 EIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL----KTHFPEGLPELAI 103
Query: 218 RQMLR--VAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKF 270
+L+ + A ++H G +HR +K + L K GL IK GK+
Sbjct: 104 AFILKDVLNALDYIHSKGFIHRSVKASHILL-----SGDGKVVLSGLRYSVSMIKHGKRQ 158
Query: 271 QDIVGSA-------YYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDK----- 315
+ + +++PEVL+ + +SD++S+G+ L G PF D
Sbjct: 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM 218
Query: 316 -TED-----------GIFKEVLRNKPDFRRK---PWPSISNSAK----------DFVKKL 350
E + + R P S FV+
Sbjct: 219 LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELC 278
Query: 351 LVKDPRARLTAAQALSHP 368
L +DP +R +A+Q L+H
Sbjct: 279 LQRDPESRPSASQLLNHS 296
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 2e-12
Identities = 64/243 (26%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKILIRVVSFQDLKMILPI 150
TI K++G G+FG K G + VA+K + +K ++
Sbjct: 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRL---------------- 50
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
D E I+ H N+++ V I E E G L D+ L + D ++T
Sbjct: 51 ---DFLTEASIMGQFD-HPNIIRLEGVVTKSRPVMIITEYMENGSL-DKFLRENDGKFT- 104
Query: 211 KDAAVVVRQMLR-VAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+ MLR +A+ VHRD+ N L S + K +DFGLS ++
Sbjct: 105 ---VGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS---NLVCKVSDFGLSRRLED 158
Query: 267 GKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 321
+ G + APE + RK SDVWS G++ + ++ G RP+WD + +
Sbjct: 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVI 218
Query: 322 KEV 324
K V
Sbjct: 219 KAV 221
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 2e-12
Identities = 75/303 (24%), Positives = 124/303 (40%), Gaps = 62/303 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G + Y K NG VA+K V+ Q+ + A+ RE +L+
Sbjct: 13 LGEGSYATVYKGKSKVNGKLVALK----------VIRLQEEEGTPFTAI----REASLLK 58
Query: 164 ALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
L H N+V ++ + Y+ +LC+ + K ++ + +
Sbjct: 59 GLK-HANIVLLHDIIHTKETLTLVFEYVHTDLCQ-------YMDKHPGGLHPENVKLFLF 110
Query: 219 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 277
Q+LR + H ++HRD+KP+N L E LK DFGL+ P + + V +
Sbjct: 111 QLLRGLSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSNEVVTL 167
Query: 278 YYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF--WDKTEDGIFKEVL-------- 325
+Y P+VL + + D+W +G I ++ G F +D + + L
Sbjct: 168 WYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 227
Query: 326 -----RNKPDFR------------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALS 366
+ P F+ R+ W +S N A+D KLL P+ RL+A ALS
Sbjct: 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287
Query: 367 HPW 369
H +
Sbjct: 288 HEY 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 4e-12
Identities = 64/231 (27%), Positives = 95/231 (41%), Gaps = 45/231 (19%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
F +RY ++LG G FG Y Y + G+ VAVK +++
Sbjct: 1 FHKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--------------G 46
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDS 206
K+E+ IL+ L HEN+VK+ + + + ME G L D
Sbjct: 47 QQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------- 97
Query: 207 RYTEKDAAVVVRQMLRVAAEC----HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGL 260
Y K + + +L C +LH +HRD+ N L + D +K DFGL
Sbjct: 98 -YLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGL 153
Query: 261 SDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306
+ + G ++ +D ++ A E LK K SDVWS GV Y LL
Sbjct: 154 AKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 65/216 (30%), Positives = 90/216 (41%), Gaps = 44/216 (20%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+ +G G FG Y K N + VAVK R DLK +E +I
Sbjct: 1 EKIGKGNFGDVYKGVLKGNTE-VAVKTC-------RSTLPPDLK-------RKFLQEAEI 45
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK-------DAA 214
L+ H N+VK +YI MEL GG LL L KK +R T K DAA
Sbjct: 46 LKQYD-HPNIVKLIGVCVQKQPIYIVMELVPGGSLLT-FLRKKKNRLTVKKLLQMSLDAA 103
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD------FIKPGK 268
M + ++ +HRD+ N L E++ LK +DFG+S +
Sbjct: 104 A---GMEYLESKN----CIHRDLAARNCL---VGENNVLKISDFGMSREEEGGIYTVSDG 153
Query: 269 KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITY 303
Q + + APE L + ESDVWS G++ +
Sbjct: 154 LKQIPIK---WTAPEALNYGRYTSESDVWSYGILLW 186
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 42/224 (18%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+G +G G+FG + + G +VAVK ++ + + +F E
Sbjct: 9 KLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQ--AFLA--------------E 50
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++ L H N+V+ N +YI E G L+D + + A + +
Sbjct: 51 ASVMTTLR-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL-------RSRGRAVITLA 102
Query: 219 QMLRVA-----AECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
Q L A +L VHRD+ N L ED K +DFGL+ K + Q
Sbjct: 103 QQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLA---KEASQGQ 156
Query: 272 DIVG-SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
D + APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 157 DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 66.2 bits (161), Expect = 6e-12
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 52/238 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A E++K+L+ V + LK A +D +RE ++L
Sbjct: 13 LGEGAFGKVFLA-------ECHNLLPEQDKMLVAV---KALKEASESARQDFQREAELLT 62
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTE--KDAA---VV 216
L H+++V+FY + + + E G+L +R L D++ +D A +
Sbjct: 63 VLQ-HQHIVRFYGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKILAGGEDVAPGQLT 120
Query: 217 VRQMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ QML +A++ +L L VHRD+ N L + +K DFG+S
Sbjct: 121 LGQMLAIASQIASGMVYLASLHFVHRDLATRNCL---VGQGLVVKIGDFGMS-------- 169
Query: 270 FQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 313
+DI + YY + PE +L RK ESD+WS GV+ + I G++P++
Sbjct: 170 -RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 1e-11
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 99 TIGKLLGHGQFGYTYVAT-DKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
T+G+ +G GQFG Y ++ VAVK + + ++ E
Sbjct: 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC-------TSPSVR-------EKF 54
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+E I++ H ++VK ++ V+I MEL GEL + K S D A
Sbjct: 55 LQEAYIMRQF-DHPHIVKLIGVITENP-VWIVMELAPLGELRSYLQVNKYSL----DLAS 108
Query: 216 VVRQMLRVA-AECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
++ +++ A +L VHRD+ N L S +K DFGLS +++ ++
Sbjct: 109 LILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKA 165
Query: 273 IVGS--AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF-WDKTEDGIFK 322
G ++APE + R+ SDVW GV + IL+ G +PF K D I +
Sbjct: 166 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR 220
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 2e-11
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G GQFG ++ +VA+K I + + + ED E +++
Sbjct: 12 IGSGQFGLVWLGY-WLEKRKVAIKTIREGAM----------------SEEDFIEEAQVMM 54
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQM 220
L+ H +V+ Y + + + + E E G L D + A++ E + V M
Sbjct: 55 KLS-HPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGM 113
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 280
+ + ++HRD+ N L E+ +K +DFG++ F+ ++ G+ + V
Sbjct: 114 AYLESSN----VIHRDLAARNCL---VGENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPV 165
Query: 281 ---APEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324
+PEV K +SDVWS GV+ + + G+ P+ +++ + + +
Sbjct: 166 KWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI 214
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 2e-11
Identities = 68/253 (26%), Positives = 103/253 (40%), Gaps = 53/253 (20%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+ LG GQFG + N VAVK ++ + +D E +I
Sbjct: 12 RKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----------------DPKDFLAEAQI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H +++ Y + +YI EL + G LL+ L R A+ + Q++
Sbjct: 55 MKKLR-HPKLIQLYAVCTLEEPIYIVTELMKYGSLLE-YLQGGAGR------ALKLPQLI 106
Query: 222 RVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------PG 267
+AA+ +HRD+ N L E++ K DFGL+ IK G
Sbjct: 107 DMAAQVASGMAYLEAQNYIHRDLAARNVL---VGENNICKVADFGLARVIKEDIYEAREG 163
Query: 268 KKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVL 325
KF + APE L + +SDVWS G+ +T I+ GR P+ T EVL
Sbjct: 164 AKF-----PIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----AEVL 214
Query: 326 RNKPDFRRKPWPS 338
+ R P P
Sbjct: 215 QQVDQGYRMPCPP 227
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 3e-11
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 156 KREVKILQALAGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+RE + L H N+V ++ E ++ E G L + + A D +
Sbjct: 26 RRETALCARLY-HPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAA--DGALPAGETG 82
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-- 272
++ Q+L A H G+VHRD+KP+N + K DFG+ + PG + D
Sbjct: 83 RLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL-PGVRDADVA 141
Query: 273 -------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
++G+ Y APE L+ + P SD+++ G+I L G+R + I +
Sbjct: 142 TLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAEILYQQ 201
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
L + D PW + + ++K L KDPR R +A AL
Sbjct: 202 L-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 3e-11
Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
YT+ K L G G +VAT D V +K +K LI + Q++ V
Sbjct: 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNH------PSV-- 119
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
+++ L + D Y Y L K+ A ++
Sbjct: 120 -IRMKDTLVSGAITCMVLPHYSSDLYTY---------------LTKRSRPLPIDQALIIE 163
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
+Q+L H ++HRD+K EN + D G + F F + G+
Sbjct: 164 KQILEGLRYLHAQRIIHRDVKTENIFINDV---DQVCIGDLGAAQFPVVAPAFLGLAGTV 220
Query: 278 YYVAPEVLKR-KSGPESDVWSIGVITYILL 306
APEVL R K ++D+WS G++ + +L
Sbjct: 221 ETNAPEVLARDKYNSKADIWSAGIVLFEML 250
|
Length = 357 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 65/247 (26%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
I K++G G+FG K G R VA+K ++ + + +
Sbjct: 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLK--------AGYTEKQR------R 50
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
D E I+ H N++ V I E E G L D L K D ++T
Sbjct: 51 DFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFT---- 104
Query: 214 AVVVRQMLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + MLR A + G VHRD+ N L S + K +DFGLS +
Sbjct: 105 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS---NLVCKVSDFGLS------RV 155
Query: 270 FQDIVGSAY----------YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 317
+D +AY + APE + RK SDVWS G++ + ++ G RP+W+ +
Sbjct: 156 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN 215
Query: 318 DGIFKEV 324
+ K +
Sbjct: 216 QDVIKAI 222
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 4e-11
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 476
+LR+ F D D +G+IS +E++ AL K L L E + E+++ +D + DG +DF EF+
Sbjct: 1 ELREAFRLFDKDGDGTISADELKAAL-KSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFL 59
Query: 477 AA 478
Sbjct: 60 EL 61
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 65.7 bits (160), Expect = 4e-11
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I K + G FG Y+ K N AVK ++K MI V V+
Sbjct: 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKAD------------MINKNMVHQVQA 53
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E L AL+ +V Y + + N VY+ ME GG++ + L + E+ A +
Sbjct: 54 ERDAL-ALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDV--KSLLHIYGYFDEEMAVKYI 110
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
++ H HG++HRD+KP+N L + + +K TDFGLS
Sbjct: 111 SEVALALDYLHRHGIIHRDLKPDNMLISN---EGHIKLTDFGLS 151
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 5e-11
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+LLG G FG + T K + VAVK +++ Q+LK+ E +I
Sbjct: 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-------QELKI-------KFLSEARI 45
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+ H N+VK +YI MEL GG+ L + KKD T++ +V+ L
Sbjct: 46 LKQY-DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQ----LVKFAL 100
Query: 222 RVA---AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS----DFIKPGKKFQDIV 274
A A +HRD+ N L E++ LK +DFG+S D I + I
Sbjct: 101 DAAAGMAYLESKNCIHRDLAARNCL---VGENNVLKISDFGMSRQEDDGIYSSSGLKQI- 156
Query: 275 GSAYYVAPEVLKR-KSGPESDVWSIGVITY 303
+ APE L + ESDVWS G++ +
Sbjct: 157 -PIKWTAPEALNYGRYSSESDVWSYGILLW 185
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 6e-11
Identities = 68/281 (24%), Positives = 112/281 (39%), Gaps = 39/281 (13%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
I +++G G+FG K G R VA+K ++ + + + D
Sbjct: 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLK--------SGYTEKQR------RDFL 53
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E I+ H N++ V I E E G L D L + D ++T +
Sbjct: 54 SEASIMGQF-DHPNIIHLEGVVTKSRPVMIITEFMENGAL-DSFLRQNDGQFTVIQLVGM 111
Query: 217 VRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+R + ++ +E + VHRD+ N L S + K +DFGLS F++
Sbjct: 112 LRGIAAGMKYLSEMNY---VHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTY 165
Query: 274 VGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 325
S + APE + RK SDVWS G++ + ++ G RP+WD + + +
Sbjct: 166 TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI- 224
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ D+R P + + KD AR Q +S
Sbjct: 225 --EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 8e-11
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 551
+ AF FD D DG I+ +EL+ G ID ++ E D D DG+I EF L+
Sbjct: 3 REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62
Query: 552 R 552
Sbjct: 63 A 63
|
Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 8e-11
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 44/224 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+G+++G G+FG V + G +VAVK I K + +F + E
Sbjct: 9 TLGEIIGEGEFGA--VLQGEYTGQKVAVKNI---KCDVTAQAFLE--------------E 49
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++ L H+N+V+ N +YI MEL G L++ + T A V V
Sbjct: 50 TAVMTKLH-HKNLVRLLGVILH-NGLYIVMELMSKGNLVNFL-------RTRGRALVSVI 100
Query: 219 QMLRVAAEC-----HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
Q+L+ + + +L LVHRD+ N L ED K +DFGL+ + G
Sbjct: 101 QLLQFSLDVAEGMEYLESKKLVHRDLAARNIL---VSEDGVAKVSDFGLA---RVGSMGV 154
Query: 272 DIVG-SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
D + APE LK +K +SDVWS GV+ + + GR P+
Sbjct: 155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 1e-10
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +++ ++R+ FD D D +G+I +E++ A+ + L ++ K+ + +++ +D + G
Sbjct: 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAM-RSLGFEPKKEEIKQMIADVDKDGSGK 69
Query: 470 VDFSEFV-AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI 527
+DF EF+ T + E D + L+ AF FD D+ G I+ + L R+ L +I
Sbjct: 70 IDFEEFLDIMTKKLG---ERDPREEILK---AFRLFDDDKTGKISLKNLKRVAKELGETI 123
Query: 528 D-----PLLEEADIDKDGRISLSEFRRLLRTASIS 557
+++EAD + DG IS EF R+++ ++
Sbjct: 124 TDEELQEMIDEADRNGDGEISEEEFYRIMKKTNLF 158
|
Length = 158 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 1e-10
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 47/235 (20%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIE----KNKILIRVVSF 141
++K F +R + LG G FG + GD VAVK ++ N I
Sbjct: 1 FEKRFLKRI---RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI------- 50
Query: 142 QDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD--NYVYIAMELCEGG---EL 196
D+K+E++IL+ L HEN+VK+ +D N + + ME G E
Sbjct: 51 -----------ADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY 98
Query: 197 LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256
L R K + + K A + + M + + + VHRD+ N L +S + +K
Sbjct: 99 LPRNKNKINLKQQLKYAVQICKGMDYLGSRQY----VHRDLAARNVLVES---EHQVKIG 151
Query: 257 DFGLSDFIKPGKKF----QDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 306
DFGL+ I+ K++ D+ ++ APE L + K SDVWS GV Y LL
Sbjct: 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELL 206
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 2e-10
Identities = 70/260 (26%), Positives = 107/260 (41%), Gaps = 50/260 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKILIRVVSFQDLKMILPIAVE 153
K++G G+FG + K G + VA+K + EK + +
Sbjct: 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR-------------------Q 51
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
D E I+ + H N+++ I E E G L D+ L D ++
Sbjct: 52 DFLSEASIMGQFS-HHNIIRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFS---- 105
Query: 214 AVVVRQMLR--VAAECHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PG 267
+ + MLR A +L + VHRD+ N L S E K +DFGLS ++ P
Sbjct: 106 SYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE---CKVSDFGLSRVLEDDPE 162
Query: 268 KKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 323
+ G + APE + RK SDVWS G++ + ++ G RP+WD + E
Sbjct: 163 GTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN----HE 218
Query: 324 VLRNKPDFRRKPWPSISNSA 343
V++ D R P P SA
Sbjct: 219 VMKAINDGFRLPAPMDCPSA 238
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-10
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 28/222 (12%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ T K LG GQFG + D VA+K I++ + + ++
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----------------SEDEF 46
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E K++ L+ HE +V+ Y +YI E G LL+ L + R+
Sbjct: 47 IEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLN-YLREHGKRFQPSQLLE 104
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+ + + A +HRD+ N L +K +DFGLS ++ ++ VG
Sbjct: 105 MCKDVCEGMAYLESKQFIHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTSSVG 160
Query: 276 SAYYV---APEVLKR-KSGPESDVWSIGVITY-ILLCGRRPF 312
S + V PEVL K +SDVW+ GV+ + + G+ P+
Sbjct: 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPY 202
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 61.5 bits (149), Expect = 2e-10
Identities = 73/301 (24%), Positives = 121/301 (40%), Gaps = 54/301 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+ LG G + Y + NG VA+K V+S + + + A+ RE +
Sbjct: 11 EKLGEGSYATVYKGISRINGQLVALK----------VISMKTEEGVPFTAI----REASL 56
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L+ L H N+V ++ + E L + + + + + + Q+L
Sbjct: 57 LKGLK-HANIVLLHDIIHTKETLTFVFEYMHTD--LAQYMIQHPGGLHPYNVRLFMFQLL 113
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYV 280
R A H ++HRD+KP+N L E LK DFGL+ P + + V + +Y
Sbjct: 114 RGLAYIHGQHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTLWYR 170
Query: 281 APEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------------WD----KTED--- 318
P+VL D+W G I +L G+ F W TED
Sbjct: 171 PPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230
Query: 319 GIFKEVLRNKPDFRRKP--------WPSISN--SAKDFVKKLLVKDPRARLTAAQALSHP 368
G+ K + KP++ W +S A+D ++L+ P+ R++A AL HP
Sbjct: 231 GVSK-LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP 289
Query: 369 W 369
+
Sbjct: 290 Y 290
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 2e-10
Identities = 82/375 (21%), Positives = 157/375 (41%), Gaps = 73/375 (19%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR 123
K + +++++ K D ++ ++ Y +G ++G+G FG Y A ++
Sbjct: 34 KLDEEERSHNNNAGEDEDEEKMIDNDINRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEK 93
Query: 124 VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF----- 178
VA+KK+ QD + RE+ I++ L H N++ + +
Sbjct: 94 VAIKKV-----------LQDPQY--------KNRELLIMKNL-NHINIIFLKDYYYTECF 133
Query: 179 ---EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVR----QMLRVAAECH 228
E + ++ + ME + + + K Y + A+ +V+ Q+ R A H
Sbjct: 134 KKNEKNIFLNVVMEF------IPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187
Query: 229 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 288
+ HRD+KP+N L +LK DFG + + G++ + S +Y APE++
Sbjct: 188 SKFICHRDLKPQNLLIDP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGA 245
Query: 289 SGPES--DVWSIGVITYILLCGRRPFWDK----------------TEDGIFKEVLRNKPD 330
+ + D+WS+G I ++ G F + TED + KE+ N D
Sbjct: 246 TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL-KEMNPNYAD 304
Query: 331 FR---------RKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS-EI 379
+ +K +P + A +F+ + L +P RL +AL+ P+ + D ++
Sbjct: 305 IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKL 364
Query: 380 PIDISVLNNMRQFVK 394
P I L ++ F
Sbjct: 365 PKYIDKLPDLFNFCD 379
|
Length = 440 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 3e-10
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 51/246 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R + + LG G FG ++A K+K+L+ V + +D + A +D
Sbjct: 5 RDIVLKRELGEGAFGKVFLA-------ECYNLSPTKDKMLVAVKALKDPTLA---ARKDF 54
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------DSRY 208
+RE ++L L HE++VKFY D + + + E + G+L + A D +
Sbjct: 55 QREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 113
Query: 209 TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
+ + + QML +A++ +L VHRD+ N L + + +K DFG+S
Sbjct: 114 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS 170
Query: 262 DFIKPGKKFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLC 307
+D+ + YY + PE ++ RK ESDVWS GVI + I
Sbjct: 171 ---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTY 221
Query: 308 GRRPFW 313
G++P++
Sbjct: 222 GKQPWF 227
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 42/266 (15%)
Query: 80 IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVV 139
+P R +F DK T+GK LG G FG +A + + + K +K K + V
Sbjct: 4 LPEDPRWEFSRDK-----LTLGKPLGEGCFGQVVMA------EALGIDK-DKPKEAVTVA 51
Query: 140 SFQDLKMILPIAVE----DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 195
+KM+ A E D+ E+++++ + H+N++ A D +Y+ +E G
Sbjct: 52 ----VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 107
Query: 196 LLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 241
L + + A++ D + T KD Q+ R +HRD+ N
Sbjct: 108 LREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167
Query: 242 FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 297
L E++ +K DFGL+ + I KK + ++APE L R +SDVWS
Sbjct: 168 VL---VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 224
Query: 298 IGVITY-ILLCGRRPFWDKTEDGIFK 322
GV+ + I G P+ + +FK
Sbjct: 225 FGVLMWEIFTLGGSPYPGIPVEELFK 250
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 4e-10
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R T+GK LG G FG +A + + + K + NK + V KM+ A +
Sbjct: 13 RLTLGKPLGEGCFGQVVMA------EAIGIDKDKPNKPVTVAV-----KMLKDDATDKDL 61
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 62 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSF 121
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + T KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 122 DTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL---VTEDNVMKIADF 178
Query: 259 GLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ + ++ ++APE L R +SDVWS GV+ + I G P+
Sbjct: 179 GLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 239 GIPVEELFK 247
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 5e-10
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 58/259 (22%)
Query: 99 TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
T+ + LG G FG Y +A G+ RVA+K + +N S ++ L
Sbjct: 9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA------SMRERIEFL----- 57
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKD 212
E +++ H +VV+ + MEL G+L + +++ ++
Sbjct: 58 ---NEASVMKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGL 113
Query: 213 AAVVVRQMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+++ +++AAE +L VHRD+ N + ED ++K DFG++
Sbjct: 114 GPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCM---VAEDLTVKIGDFGMT---- 166
Query: 266 PGKKFQDIVGSAYY------------VAPEVLKRKSG---PESDVWSIGVITY-ILLCGR 309
+DI + YY +APE LK G +SDVWS GV+ + +
Sbjct: 167 -----RDIYETDYYRKGGKGLLPVRWMAPESLK--DGVFTTKSDVWSFGVVLWEMATLAE 219
Query: 310 RPFWDKTEDGIFKEVLRNK 328
+P+ + + + K V+
Sbjct: 220 QPYQGLSNEEVLKFVIDGG 238
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 5e-10
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 42/229 (18%)
Query: 94 FDRRYTIG-KLLGHGQFGYT----YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
F+ R+ + LG G FG Y G+ VAVKK++ +
Sbjct: 1 FEERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--------------- 45
Query: 149 PIAVEDVKREVKILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKK 204
+ D +RE++IL++L H+N+VK+ Y+A + + ME G L D + +
Sbjct: 46 AEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSA--GRRNLRLVMEYLPYGSLRDYLQKHR 102
Query: 205 ---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
D R A+ + + M + ++ + VHRD+ N L +S ++ +K DFGL+
Sbjct: 103 ERLDHRKLLLYASQICKGMEYLGSKRY----VHRDLATRNILVES---ENRVKIGDFGLT 155
Query: 262 DFIKPGKKFQDIV----GSAYYVAPEVL-KRKSGPESDVWSIGVITYIL 305
+ K++ + ++ APE L + K SDVWS GV+ Y L
Sbjct: 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 6e-10
Identities = 66/248 (26%), Positives = 95/248 (38%), Gaps = 60/248 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
T+ + LGHG FG Y + +GD AV+ K L S QD D
Sbjct: 9 TLLRALGHGAFGEVYEGLYRGRDGD--AVELQVAVKTLPESCSEQD--------ESDFLM 58
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKD 212
E I+ H+N+V+ + +I +EL GG+L +R ++ S T KD
Sbjct: 59 EALIMSKFN-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKD 117
Query: 213 AAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
R VA C + +HRD+ N L K DFG++
Sbjct: 118 LLFCARD---VAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA-------- 166
Query: 270 FQDIVGSAYYVAPEVLKRKSG----------PE----------SDVWSIGVITY-ILLCG 308
+DI ++YY RK G PE +DVWS GV+ + I G
Sbjct: 167 -RDIYRASYY-------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLG 218
Query: 309 RRPFWDKT 316
P+ +T
Sbjct: 219 YMPYPGRT 226
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 6e-10
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE--- 153
R +GK LG G FG +A + + + K + N++ V KM+ A E
Sbjct: 19 RLVLGKPLGEGCFGQVVMA------EAIGLDKEKPNRVTKVAV-----KMLKSDATEKDL 67
Query: 154 -DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------- 204
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 68 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCY 127
Query: 205 ------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + + KD Q+ R +HRD+ N L ED+ +K DF
Sbjct: 128 NPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADF 184
Query: 259 GLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFW 313
GL+ I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 185 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244
Query: 314 DKTEDGIFK 322
+ +FK
Sbjct: 245 GVPVEELFK 253
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 7e-10
Identities = 53/218 (24%), Positives = 82/218 (37%), Gaps = 49/218 (22%)
Query: 102 KLLGHGQFGYTYVAT-DKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K LG G FG + G VAVK ++ +K L ++D +E
Sbjct: 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDK--------------LSDIMDDFLKE 46
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
I+ +L HEN+++ Y + + EL G LLDR+ + + +
Sbjct: 47 AAIMHSLD-HENLIRLYGVVLTHPLMMVT-ELAPLGSLLDRL---RKDALGHFLISTLCD 101
Query: 219 QMLRVA---AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+++A +HRD+ N L S + +K DFGL + +
Sbjct: 102 YAVQIANGMRYLESKRFIHRDLAARNILLASDDK---VKIGDFGLMRALPQNED------ 152
Query: 276 SAYYV------------APEVLK-RKSGPESDVWSIGV 300
+YV APE L+ R SDVW GV
Sbjct: 153 --HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGV 188
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 7e-10
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 29/264 (10%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIR---VVSFQDLKMILPIAVEDVKREV 159
++G G FG Y G A+K ++K +I ++ ++ + M+ ++ D
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF-- 58
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
+V AF + + ++L GG+L + + ++EK+ +
Sbjct: 59 -----------IVCMTYAFHTPDKLCFILDLMNGGDLHYHL--SQHGVFSEKEMRFYATE 105
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
++ H +V+RD+KP N L E ++ +D GL+ DF K KK VG+
Sbjct: 106 IILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHG 160
Query: 279 YVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKP 335
Y+APEVL++ + +S D +S+G + + LL G PF KT+D E+ R +
Sbjct: 161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTVNVEL 218
Query: 336 WPSISNSAKDFVKKLLVKDPRARL 359
S S K ++ LL +D RL
Sbjct: 219 PDSFSPELKSLLEGLLQRDVSKRL 242
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 9e-10
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G FG ++A E++KIL+ V + +D A +D RE ++L
Sbjct: 13 LGEGAFGKVFLA-------ECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLT 62
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL--------LDRILAKKDSRYTEKDAAV 215
L HE++VKFY + + + + E + G+L D +L + +R E +
Sbjct: 63 NLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE----L 117
Query: 216 VVRQMLRVAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
QML +A + VHRD+ N L E+ +K DFG+S
Sbjct: 118 TQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMS------- 167
Query: 269 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 314
+D+ + YY + PE ++ RK ESDVWS+GV+ + I G++P++
Sbjct: 168 --RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 225
Query: 315 KTEDGIFKEVLRNKPDFRRKPWP 337
+ + + + + + + R + P
Sbjct: 226 LSNNEVIECITQGRVLQRPRTCP 248
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 1e-09
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG GQ+G Y K VAVK ++++ + VE+ +E +++
Sbjct: 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMK 57
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+V+ + YI E G LLD + ++ E +A V++ ++
Sbjct: 58 EIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQI 113
Query: 224 A-AECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 278
+ A +L +HRD+ N L E+ +K DFGLS + G + G+ +
Sbjct: 114 SSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 169
Query: 279 -YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 312
+ APE L K +SDVW+ GV+ + I G P+
Sbjct: 170 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 1e-09
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 51/256 (19%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+T+ + LG G FG + K N RVA+K ++ + +L + +D ++
Sbjct: 8 FTLERKLGSGYFGEVWEGLWK-NRVRVAIKILKSDDLLKQ---------------QDFQK 51
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
EV+ L+ L H++++ + VYI EL E G LL L + + + V
Sbjct: 52 EVQALKRLR-HKHLISLFAVCSVGEPVYIITELMEKGSLLA-FLRSPEGQ------VLPV 103
Query: 218 RQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
++ +A + +L +HRD+ N L ED K DFGL+ IK
Sbjct: 104 ASLIDMACQVAEGMAYLEEQNSIHRDLAARNIL---VGEDLVCKVADFGLARLIK----- 155
Query: 271 QDIVGSA------YYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 322
+D+ S+ + APE +SDVWS G++ Y + G+ P+ ++
Sbjct: 156 EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYD 215
Query: 323 EVLRNKPDFRRKPWPS 338
++ R P P+
Sbjct: 216 QITAG----YRMPCPA 227
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 1e-09
Identities = 57/222 (25%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
K+LG G FG Y G++ VA+K + + P A +++
Sbjct: 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--------------PKANKEI 56
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E ++ A H +VV+ I +L G LLD + KD +
Sbjct: 57 LDEAYVM-ASVDHPHVVRLLGICLSSQVQLIT-QLMPLGCLLDYVRNHKD-NIGSQYLLN 113
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
Q+ + + LVHRD+ N L K+ +K TDFGL+ + +K G
Sbjct: 114 WCVQIAKGMSYLEEKRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEKEYHAEG 170
Query: 276 SAY---YVAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 312
++A E +L R +SDVWS GV + L+ G +P+
Sbjct: 171 GKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 2e-09
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
++G G FG Y G A+K ++K +I ++ E + +I+
Sbjct: 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-------------QGETLALNERIM 47
Query: 163 QALAGHEN---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
+L + +V AF + + ++L GG+L + + ++E + +
Sbjct: 48 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEAEMRFYAAE 105
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
++ H +V+RD+KP N L E ++ +D GL+ DF K KK VG+
Sbjct: 106 IILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHG 160
Query: 279 YVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDG--IFKEVLRNKPDFRR 333
Y+APEVL++ +S D +S+G + + LL G PF KT+D I + L +
Sbjct: 161 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--- 217
Query: 334 KPWP-SISNSAKDFVKKLLVKDPRARL 359
P S S + ++ LL +D RL
Sbjct: 218 --LPDSFSPELRSLLEGLLQRDVNRRL 242
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 2e-09
Identities = 83/330 (25%), Positives = 127/330 (38%), Gaps = 80/330 (24%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
G +G G +G+ Y A K D A+K+IE I + RE
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSAC-----------------RE 48
Query: 159 VKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV- 215
+ +L+ L H NV+ F D V++ + E +L I + S+ +K +
Sbjct: 49 IALLRELK-HPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP 106
Query: 216 ------VVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----I 264
++ Q+L H + ++HRD+KP N L E +K D G + +
Sbjct: 107 RSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 166
Query: 265 KPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR------------- 309
KP +V + +Y APE+L R D+W+IG I LL
Sbjct: 167 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 226
Query: 310 RPFWDKTEDGIFK----------EVLRNKP-------DFRRKPWPS-----------ISN 341
PF D IF E +R P DFRR + + +
Sbjct: 227 NPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKP 286
Query: 342 SAKDFV--KKLLVKDPRARLTAAQALSHPW 369
+K F+ +KLL DP R+T+ QAL P+
Sbjct: 287 DSKVFLLLQKLLTMDPTKRITSEQALQDPY 316
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 3e-09
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 54/256 (21%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+ T+ + LG G FG Y A D G+ RVAVK + ++ L + F +
Sbjct: 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN-------- 58
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTE 210
E +++ H +VV+ + MEL G+L + + + ++
Sbjct: 59 ------EASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 111
Query: 211 KDAAVVVRQMLRVAAE-----CHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+++M+++AAE +L+ VHRD+ N + D ++K DFG++
Sbjct: 112 GRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM---VAHDFTVKIGDFGMT-- 166
Query: 264 IKPGKKFQDIVGSAYY------------VAPEVLKRKS-GPESDVWSIGVITY-ILLCGR 309
+DI + YY +APE LK SD+WS GV+ + I
Sbjct: 167 -------RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 219
Query: 310 RPFWDKTEDGIFKEVL 325
+P+ + + + K V+
Sbjct: 220 QPYQGLSNEQVLKFVM 235
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 3e-09
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 73/286 (25%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR----E 158
++G G FG A K +G ++ +KM+ A E+ R E
Sbjct: 9 VIGEGNFGQVIRAMIKKDGLKMNAA----------------IKMLKEFASENDHRDFAGE 52
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA---- 214
+++L L H N++ A E+ Y+YIA+E G LLD + + SR E D A
Sbjct: 53 LEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFL---RKSRVLETDPAFAKE 109
Query: 215 ------VVVRQMLRVAAECH--LHGL-----VHRDMKPENFLFKSAKEDSSLKATDFGLS 261
+ +Q+L+ A++ + L +HRD+ N L E+ + K DFGLS
Sbjct: 110 HGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVL---VGENLASKIADFGLS 166
Query: 262 --DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF----- 312
+ + K + ++A E L +SDVWS GV+ + I+ G P+
Sbjct: 167 RGEEVYVKKTMGRL--PVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC 224
Query: 313 ---WDKTEDG---------------IFKEVLRNKPDFRRKPWPSIS 340
++K G + ++ R++P + R P+ IS
Sbjct: 225 AELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRP-YERPPFAQIS 269
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (138), Expect = 4e-09
Identities = 67/256 (26%), Positives = 101/256 (39%), Gaps = 47/256 (18%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
++G G FG A K +G ++ K + S D + D E+++L
Sbjct: 2 VIGEGNFGQVLKARIKKDG----LRMDAAIKRMKEYASKDDHR--------DFAGELEVL 49
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA-------- 214
L H N++ A E Y+Y+A+E G LLD + + SR E D A
Sbjct: 50 CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTA 106
Query: 215 --VVVRQMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
+ +Q+L AA+ G+ +HRD+ N L E+ K DFGLS
Sbjct: 107 STLSSQQLLHFAADV-ARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSRGQ 162
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF--------WD 314
+ K ++A E L SDVWS GV+ + I+ G P+ ++
Sbjct: 163 EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 222
Query: 315 KTEDGIFKEVLRNKPD 330
K G E N D
Sbjct: 223 KLPQGYRLEKPLNCDD 238
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 4e-09
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++AT + +VAVK ++ ++VE E +
Sbjct: 12 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGS----------------MSVEAFLAEANV 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +VK +A +YI E G LLD + + + S+ Q+
Sbjct: 55 MKTLQ-HDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 113 EGMAFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKF---- 165
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGV-ITYILLCGRRPF 312
+ APE + S +SDVWS G+ + I+ GR P+
Sbjct: 166 -PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPY 204
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 5e-09
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++ N +VAVK ++ + +V+ E +
Sbjct: 12 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----------------SVQAFLEEANL 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H+ +V+ Y + +YI E G LLD + + + + Q+
Sbjct: 55 MKTLQ-HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 113
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L E K DFGL+ I + G KF
Sbjct: 114 EGMAYIERKNYIHRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF---- 166
Query: 275 GSAYYVAPEVLKRKSGP-ESDVWSIGVITY-ILLCGRRPF 312
+ APE + S +SDVWS G++ Y I+ G+ P+
Sbjct: 167 -PIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPY 205
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 6e-09
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K LG GQFG ++ +A +VA+K I + + + ED E
Sbjct: 7 TFMKELGSGQFGVVHLGKWRAQ-IKVAIKAINEGAM----------------SEEDFIEE 49
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K++ L+ H +V+ Y +YI E E G LL+ L ++ + + KD + +
Sbjct: 50 AKVMMKLS-HPKLVQLYGVCTQQKPLYIVTEFMENGCLLN-YLRQRQGKLS-KDMLLSMC 106
Query: 219 QMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKF 270
Q + E + +HRD+ N L S +K +DFG++ ++ G KF
Sbjct: 107 QDVCEGMEYLERNSFIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYTSSSGAKF 163
Query: 271 QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNK 328
+ PEV K +SDVWS GV+ + + G+ PF K+ + + + R
Sbjct: 164 -----PVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF 218
Query: 329 PDFRRK 334
+R K
Sbjct: 219 RLYRPK 224
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 9e-09
Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 51/218 (23%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED-VKREVKIL 162
+G G FG + +A+ VAVK + LP ++ +E +IL
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRET---------------LPPDLKAKFLQEARIL 47
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAKKDSRYTEKDAAV 215
+ + H N+V+ +YI MEL +GG+ L R+ K+ + E AA
Sbjct: 48 KQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAA- 105
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
M + ++ +HRD+ N L E + LK +DFG+S ++ +D V
Sbjct: 106 ---GMEYLESKH----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEEDGVY 149
Query: 276 SAY---------YVAPEVLKR-KSGPESDVWSIGVITY 303
++ + APE L + ESDVWS G++ +
Sbjct: 150 ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW 187
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-08
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVA----TDKANGDR---VAVKKIEKNKILIRVVSFQDL 144
+F R R +GK LG G FG A DK+ D+ VAVK ++ N + +DL
Sbjct: 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDN------ATDKDL 61
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
D+ E+++++ + H+N++ + +Y+ +E G L + + A++
Sbjct: 62 A--------DLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARR 113
Query: 205 --------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250
+ + + KD Q+ R +HRD+ N L ED
Sbjct: 114 PPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL---VTED 170
Query: 251 SSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-IL 305
+ +K DFGL+ I KK + ++APE L R +SDVWS G++ + I
Sbjct: 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIF 230
Query: 306 LCGRRPF 312
G P+
Sbjct: 231 TLGGSPY 237
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 47/228 (20%)
Query: 100 IGKLLGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ + LG GQFG ++ T NG +VAVK ++ + + E +E
Sbjct: 10 LERKLGAGQFGEVWMGT--WNGTTKVAVKTLKPGTM----------------SPEAFLQE 51
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD-----A 213
+I++ L H+ +V+ Y ++ +YI E G LLD L + + A
Sbjct: 52 AQIMKKLR-HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLD-FLKSGEGKKLRLPQLVDMA 109
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP------- 266
A + M + + +HRD+ N L E+ K DFGL+ I+
Sbjct: 110 AQIAEGMAYLESR----NYIHRDLAARNIL---VGENLVCKIADFGLARLIEDDEYTARE 162
Query: 267 GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 312
G KF + APE + +SDVWS G++ I+ GR P+
Sbjct: 163 GAKF-----PIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 1e-08
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 40/245 (16%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG GQFG ++ +VA+K +++ + + E E +
Sbjct: 12 KKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----------------SPEAFLAEANL 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
++ L H +V+ Y A +YI E E G L+D + + + T + Q+
Sbjct: 55 MKQLQ-HPRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIA 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-------GKKFQDIV 274
A +HRD++ N L E K DFGL+ I+ G KF
Sbjct: 113 EGMAFIERKNYIHRDLRAANIL---VSETLCCKIADFGLARLIEDNEYTAREGAKF---- 165
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE + + +SDVWS G+ +T I+ GR P+ T EV++N
Sbjct: 166 -PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNLERGY 220
Query: 333 RKPWP 337
R P P
Sbjct: 221 RMPRP 225
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 2e-08
Identities = 80/330 (24%), Positives = 126/330 (38%), Gaps = 80/330 (24%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
G +G G +G+ Y A K D A+K+IE I + RE
Sbjct: 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSAC-----------------RE 48
Query: 159 VKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV- 215
+ +L+ L H NV+ F D V++ + E +L I + S+ +K +
Sbjct: 49 IALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 106
Query: 216 ------VVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----I 264
++ Q+L H + ++HRD+KP N L E +K D G + +
Sbjct: 107 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 166
Query: 265 KPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR------------- 309
KP +V + +Y APE+L R D+W+IG I LL
Sbjct: 167 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 226
Query: 310 RPFWDKTEDGIFK----------EVLRNKP-------DFRRKPWPSIS------------ 340
P+ D IF E ++ P DFRR + + S
Sbjct: 227 NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP 286
Query: 341 -NSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ A ++KLL DP R+T+ QA+ P+
Sbjct: 287 DSKAFHLLQKLLTMDPIKRITSEQAMQDPY 316
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 55/213 (25%), Positives = 76/213 (35%), Gaps = 45/213 (21%)
Query: 104 LGHGQFGYT---YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
LGHG FG VAVK +++ I K L RE
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------AGKKEFL--------REAS 48
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 220
++ L H +V+ + + + + MEL G LL + KK D + Q+
Sbjct: 49 VMAQL-DHPCIVRLIGVCKGEPLMLV-MELAPLGPLLKYL--KKRREIPVSDLKELAHQV 104
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY- 279
A VHRD+ N L + K +DFG+S + G S YY
Sbjct: 105 AMGMAYLESKHFVHRDLAARNVLLVN---RHQAKISDFGMSRALGAG--------SDYYR 153
Query: 280 -----------VAPEVLK-RKSGPESDVWSIGV 300
APE + K +SDVWS GV
Sbjct: 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGV 186
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 70/259 (27%)
Query: 93 DFDR-RYTIGKLLGHGQFGY----TYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKM 146
+ R R T+GK LG G FG V D N VAVK ++ + + +DL
Sbjct: 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA------TEKDLS- 60
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-- 204
D+ E+++++ + H+N++ + +Y+ +E G L D + A++
Sbjct: 61 -------DLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPP 113
Query: 205 ------------DSRYTEKD----AAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSA 247
+ T+KD A V R M +A++ C +HRD+ N L
Sbjct: 114 GEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC-----IHRDLAARNVL---V 165
Query: 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------VAPEVL-KRKSGPESD 294
ED +K DFGL+ +DI YY +APE L R +SD
Sbjct: 166 TEDHVMKIADFGLA---------RDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD 216
Query: 295 VWSIGVITY-ILLCGRRPF 312
VWS GV+ + I G P+
Sbjct: 217 VWSFGVLLWEIFTLGGSPY 235
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 3e-08
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
I+G+ Y+APE+L K GP D W++GV + L G PF D+T +F+ +L
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN----- 594
Query: 332 RRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
R PWP +S +A++ ++ LL DP R + HP
Sbjct: 595 RDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 4e-08
Identities = 72/270 (26%), Positives = 112/270 (41%), Gaps = 43/270 (15%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K LG+GQFG ++ T N +VAVK ++ + + E E +I
Sbjct: 12 KKLGNGQFGEVWMGTWNGN-TKVAVKTLKPGTM----------------SPESFLEEAQI 54
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQM 220
++ L H+ +V+ Y A + +YI E G LLD L + R + V + Q+
Sbjct: 55 MKKLR-HDKLVQLY-AVVSEEPIYIVTEYMSKGSLLD-FLKDGEGRALKLPNLVDMAAQV 111
Query: 221 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDI 273
A +HRD++ N L + K DFGL+ I + G KF
Sbjct: 112 AAGMAYIERMNYIHRDLRSANIL---VGDGLVCKIADFGLARLIEDNEYTARQGAKF--- 165
Query: 274 VGSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
+ APE L + +SDVWS G+ +T ++ GR P+ + ++V R
Sbjct: 166 --PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG---- 219
Query: 332 RRKPWPSISN-SAKDFVKKLLVKDPRARLT 360
R P P S + + + KDP R T
Sbjct: 220 YRMPCPQDCPISLHELMLQCWKKDPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 9e-08
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 45/269 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG +VA+K ++ ++ E +E +I+
Sbjct: 14 LGQGCFGEVWMGT--WNGTTKVAIKTLKPGTMM----------------PEAFLQEAQIM 55
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L H+ +V Y A + +YI E G LLD L + D +Y + V + Q+
Sbjct: 56 KKLR-HDKLVPLY-AVVSEEPIYIVTEFMGKGSLLD-FLKEGDGKYLKLPQLVDMAAQIA 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A +HRD++ N L ++ K DFGL+ I + G KF
Sbjct: 113 DGMAYIERMNYIHRDLRAANIL---VGDNLVCKIADFGLARLIEDNEYTARQGAKF---- 165
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGVI-TYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G++ T ++ GR P+ + ++V R
Sbjct: 166 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG----Y 220
Query: 333 RKPWPS-ISNSAKDFVKKLLVKDPRARLT 360
R P P S + +K KDP R T
Sbjct: 221 RMPCPQGCPESLHELMKLCWKKDPDERPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 73/269 (27%), Positives = 110/269 (40%), Gaps = 45/269 (16%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG ++ T NG RVA+K ++ + + E +E +++
Sbjct: 14 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----------------SPEAFLQEAQVM 55
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQML 221
+ L HE +V+ Y A + +YI E G LLD L + +Y V + Q+
Sbjct: 56 KKLR-HEKLVQLY-AVVSEEPIYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIA 112
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIV 274
A VHRD++ N L E+ K DFGL+ I + G KF
Sbjct: 113 SGMAYVERMNYVHRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF---- 165
Query: 275 GSAYYVAPEV-LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L + +SDVWS G+ +T + GR P+ + +V R
Sbjct: 166 -PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----Y 220
Query: 333 RKPWPS-ISNSAKDFVKKLLVKDPRARLT 360
R P P S D + + K+P R T
Sbjct: 221 RMPCPPECPESLHDLMCQCWRKEPEERPT 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 3e-07
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
++G G FG A K +G R+ A+K++++ S D + D E++
Sbjct: 14 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHR--------DFAGELE 59
Query: 161 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--- 217
+L L H N++ A E Y+Y+A+E G LLD + + SR E D A +
Sbjct: 60 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANS 116
Query: 218 -------RQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+Q+L AA+ +HRD+ N L E+ K DFGLS
Sbjct: 117 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSR- 172
Query: 264 IKPGKK--FQDIVGS--AYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTE 317
G++ + +G ++A E L SDVWS GV+ + I+ G P+ T
Sbjct: 173 ---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229
Query: 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+++++ + +R + + + D +++ + P R + AQ L
Sbjct: 230 AELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 3e-07
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 42/237 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
LG G+FG ++A K + E + L+ V + Q K + +RE+ +
Sbjct: 11 TTLGRGEFGEVFLAKAKGIEE-------EGGETLVLVKALQKTKD--ENLQSEFRRELDM 61
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ L+ H+NVV+ + Y+ +E + G+L + A K K + +Q +
Sbjct: 62 FRKLS-HKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKV 120
Query: 222 RVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
+ + HL VHRD+ N L S +K + LS +D+
Sbjct: 121 ALCTQIALGMDHLSNARFVHRDLAARNCLVSS---QREVKVSLLSLS---------KDVY 168
Query: 275 GSAYY-----------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTED 318
S YY +APE V + +SDVWS GV+ + + G PF+ +++
Sbjct: 169 NSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE 225
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 61/250 (24%), Positives = 98/250 (39%), Gaps = 46/250 (18%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVA-TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+F R + LG GQFG ++ D N +V+ +K++ P
Sbjct: 1 EFPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVA---VKVLRPD 57
Query: 151 AV----EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE----LLDRILA 202
A ED +EVKIL L+ N+ + D + + ME E G+ L +
Sbjct: 58 ASDNAREDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAE 116
Query: 203 KKDSRYTEK--DAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATD 257
K + ++ ++A+ +L VHRD+ N L + ++K D
Sbjct: 117 TSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK---NYTIKIAD 173
Query: 258 FGLSDFIKPGKKFQDIVGSAYY------VAP-------EVLKRKSGPESDVWSIGVITY- 303
FG+S +++ S YY P VL K +SDVW+ GV +
Sbjct: 174 FGMS---------RNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWE 224
Query: 304 IL-LCGRRPF 312
IL LC +P+
Sbjct: 225 ILTLCREQPY 234
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 6e-07
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
K+ TIGK G+FG + + G++VAVK I+ + ++
Sbjct: 6 KELKLLQTIGK----GEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLA----------- 48
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
E ++ L H N+V+ E+ +YI E G L+D + ++ S
Sbjct: 49 ------EASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL-- 99
Query: 211 KDAAVVVRQMLRVA-AECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+++ L V A +L VHRD+ N L ED+ K +DFGL+ K
Sbjct: 100 -GGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEA 152
Query: 268 KKFQDIVG-SAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPF 312
QD + APE L+ K +SDVWS G++ + I GR P+
Sbjct: 153 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 8e-07
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 502 EKFDIDRDGFITPEELR----------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
+ D D DG+I EELR ++ I+ E D D DGRIS EF +
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 53/244 (21%), Positives = 93/244 (38%), Gaps = 39/244 (15%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRV 138
PC + +Y I L G G +V T + R V VK + K
Sbjct: 77 PCETTSSSDPASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----- 131
Query: 139 VSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL--CEGGEL 196
RE+ IL+ ++ H ++ +A+ + V + M C+
Sbjct: 132 ---------------TPGREIDILKTIS-HRAIINLIHAYRWKSTVCMVMPKYKCDLFTY 175
Query: 197 LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256
+DR + A + R++L A H G++HRD+K EN +F E++ L
Sbjct: 176 VDRS-----GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG-- 227
Query: 257 DFG----LSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 311
DFG L + + G+ +PE+L ++D+WS G++ + +
Sbjct: 228 DFGAACKLDAHPDTPQCY-GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVT 286
Query: 312 FWDK 315
+ K
Sbjct: 287 LFGK 290
|
Length = 392 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 1e-06
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLK-MILPIAVEDV 155
KLLG G FG + GD VA+K I+ +FQ++ +L + D
Sbjct: 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS---GRQTFQEITDHMLAMGSLDH 68
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
V++L G + + +L G LLD + +DS D
Sbjct: 69 AYIVRLLGICPGAS--------------LQLVTQLSPLGSLLDHVRQHRDSL----DPQR 110
Query: 216 VVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--- 269
++ +++A + H +VHR++ N L KS DS ++ DFG++D + P K
Sbjct: 111 LLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS---DSIVQIADFGVADLLYPDDKKYF 167
Query: 270 FQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 312
+ + ++A E +L + +SDVWS GV + ++ G P+
Sbjct: 168 YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 398 LKQFALRALASTL---DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 454
+F L ++ L D EE +LR+ F D D +G IS+ E+R+ L K L +L +
Sbjct: 74 FPEF-LTVMSVKLKRGDKEE--ELREAFKLFDKDHDGYISIGELRRVL-KSLGERLSDEE 129
Query: 455 VLEILQAIDCNTDGLVDFSEFVAATLH 481
V ++L+ D + DG +D+ EF
Sbjct: 130 VEKLLKEYDEDGDGEIDYEEFKKLIKD 156
|
Length = 160 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 2e-06
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 48/260 (18%)
Query: 97 RYTIGKLLGHGQFGYTY------VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ T+ + LG G FG Y V D+ RVA+K + + + + F +
Sbjct: 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN------- 58
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYT 209
E +++ H +VV+ + MEL G+L + + + +
Sbjct: 59 -------EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENN 110
Query: 210 EKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS- 261
A +++M+++A E + + VHRD+ N + ED ++K DFG++
Sbjct: 111 PVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTR 167
Query: 262 -----DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWD 314
D+ + G K + +++PE LK SDVWS GV+ + I +P+
Sbjct: 168 DIYETDYYRKGGKG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 224
Query: 315 KTEDGIFKEV----LRNKPD 330
+ + + + V L +KPD
Sbjct: 225 MSNEQVLRFVMEGGLLDKPD 244
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 5e-06
Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 52/246 (21%)
Query: 100 IGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
+GK LG G+FG AT +A VAVK +++N + D
Sbjct: 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--------------SSELRD 49
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI----------LAKK 204
+ E +L+ + H +V+K Y A D + + +E + G L + L
Sbjct: 50 LLSEFNLLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSD 108
Query: 205 DSRYTEKDAAVVVR------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252
+R + R Q+ R LVHRD+ N L ++
Sbjct: 109 GNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRK--- 165
Query: 253 LKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILL 306
+K +DFGLS + K+ + + ++A E L +SDVWS GV+ + I+
Sbjct: 166 MKISDFGLSRDVYEEDSYVKRSKGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224
Query: 307 CGRRPF 312
G P+
Sbjct: 225 LGGNPY 230
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 47.5 bits (113), Expect = 5e-06
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 21/206 (10%)
Query: 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 229
N+V + ++ V++ ++ EGG+L I K E+ +M+ H
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS--KFLNIPEECVKRWAAEMVVALDALHR 103
Query: 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 289
G+V RD+ P N L ++ T F ++ + + Y APEV
Sbjct: 104 EGIVCRDLNPNNILLDDR---GHIQLTYFSRWSEVEDSCDGEAV--ENMYCAPEVGGISE 158
Query: 290 GPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 348
E+ D WS+G I + LL G + + GI N P++ +S A+ ++
Sbjct: 159 ETEACDWWSLGAILFELLTG-KTLVECHPSGINTHTTLNIPEW-------VSEEARSLLQ 210
Query: 349 KLLVKDPRARLTAAQA-----LSHPW 369
+LL +P RL A A SHP+
Sbjct: 211 QLLQFNPTERLGAGVAGVEDIKSHPF 236
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-05
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 423 DAIDVDKNGSISLEEMRQALAK-DLPWKLKESR--VLEILQAIDCNTDGLVDFSEFVAA 478
+D D +G I +EE+R+ L L +E + ID + DG + F EF+ A
Sbjct: 1 KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59
|
Length = 60 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 26/191 (13%)
Query: 141 FQDLKMILPIAVEDVK-------------REVKILQALAGHENVVKFYNAFEDDNYVYIA 187
++ K +AV+ +K RE ++Q L + +V+ E ++++ +
Sbjct: 16 YKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICEAESWMLV- 73
Query: 188 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247
MEL E G L ++ L K + TEK+ +V Q+ VHRD+ N L +
Sbjct: 74 MELAELGPL-NKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT- 130
Query: 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY----VAPEVLK-RKSGPESDVWSIGVIT 302
K +DFGLS + + + + APE + K +SDVWS GV+
Sbjct: 131 --QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM 188
Query: 303 YILLC-GRRPF 312
+ G++P+
Sbjct: 189 WEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 17/102 (16%)
Query: 153 EDVKREVKILQALAGHENVV-KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
D +REV ILQ LA V K + E D + Y+ ME EG L + S ++
Sbjct: 36 ADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL------DEVSEEEKE 89
Query: 212 DAAVVVRQMLRVAAECHLH-----GLVHRDMKPENFLFKSAK 248
D A + ++L LH L H D+ P N L K
Sbjct: 90 DIAEQLAELLA-----KLHQLPLLVLCHGDLHPGNILVDDGK 126
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N+V+ N + I E G LD L K + + A + ML A
Sbjct: 65 HSNIVRLEGVITRGNTMMIVTEYMSNG-ALDSFLRKHEGQLV----AGQLMGMLPGLASG 119
Query: 228 HLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS--AYYVA 281
+ G VH+ + L S D K + F K + + G + A
Sbjct: 120 MKYLSEMGYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAA 176
Query: 282 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
PE ++ SDVWS G++ + ++ G RP+WD + + K V
Sbjct: 177 PEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV 221
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (106), Expect = 8e-05
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 20/228 (8%)
Query: 86 TDFGYDKDFDRRYTIGKLLGHGQFGYTYV-----ATDKANGDR-VAVKKIEKNKILIRVV 139
+D +F + + L G FG ++ +T++A R V K K +
Sbjct: 138 AKLKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIA 197
Query: 140 SFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE---GGEL 196
I +E+ E+ L L HEN++K + Y+ + + +
Sbjct: 198 KRVKAGSRAAIQLEN---EILALGRL-NHENILKIEEILRSEANTYMITQKYDFDLYSFM 253
Query: 197 LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256
D KD ++ A++ +Q+L H L+HRD+K EN D +
Sbjct: 254 YDEAFDWKDRPLLKQTRAIM-KQLLCAVEYIHDKKLIHRDIKLENIFLNC---DGKIVLG 309
Query: 257 DFG-LSDFIKPGKKFQ-DIVGSAYYVAPEVLKRKSGPE-SDVWSIGVI 301
DFG F K + F VG+ +PE+L E +D+WS G+I
Sbjct: 310 DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI 357
|
Length = 501 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 34/220 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKI--LIRVVSFQDLKMILPIAVEDVKREVKI 161
LG G FG + V K+ K +I I+V+ ++ K + +++ RE +I
Sbjct: 3 LGSGNFGCV----------KKGVYKMRKKQIDVAIKVLKNENEKSV----RDEMMREAEI 48
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ L + +V+ E + + + ME+ GG L + KKD VV M
Sbjct: 49 MHQLD-NPYIVRMIGVCEAEA-LMLVMEMASGGPLNKFLSGKKDEITVSN----VVELMH 102
Query: 222 RVAAEC-HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278
+V+ +L G VHRD+ N L + K +DFGLS + + +
Sbjct: 103 QVSMGMKYLEGKNFVHRDLAARNVLLVNQH---YAKISDFGLSKALGADDSYYKARSAGK 159
Query: 279 Y----VAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPF 312
+ APE + RK SDVWS G+ + G++P+
Sbjct: 160 WPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPY 199
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 9e-05
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 270
V RQ+L H G++HRD+K EN + + ED L DFG + F +
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFH 319
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 303
I G+ APEVL P D+WS G++ +
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353
|
Length = 461 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 232 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 287
LVHRD+ N L KS + +K TDFGL+ ++ +K + G ++A E + R
Sbjct: 130 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 186
Query: 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSI 339
K +SDVWS GV + L+ F K DGI R PD R P P I
Sbjct: 187 KFTHQSDVWSYGVTIWELMT----FGGKPYDGI---PTREIPDLLEKGERLPQPPI 235
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 232 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPE-VLKR 287
LVHRD+ N L K+ + +K TDFGL+ + +K G ++A E +L R
Sbjct: 130 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR 186
Query: 288 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSI 339
+SDVWS GV + L+ G +P+ DGI E+ R P P I
Sbjct: 187 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEISSILEKGERLPQPPI 235
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
D + R +LR H + ++HRD+K EN +F + D L DFG + F P
Sbjct: 183 DILAIERSVLRAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAACF--P----V 233
Query: 272 DIVGSAYY--------VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 320
DI + YY APE+L R GP D+WS G++ + + ++K DG+
Sbjct: 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK--DGL 289
|
Length = 391 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 9/134 (6%)
Query: 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243
V + +L G LLD + KD R +D Q+ + + LVHRD+ N L
Sbjct: 83 VQLVTQLMPYGCLLDYVRENKD-RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVL 141
Query: 244 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKRKSGPESDVWSIG 299
KS + +K TDFGL+ + + G + +L R+ +SDVWS G
Sbjct: 142 VKSP---NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYG 198
Query: 300 VITYILLC-GRRPF 312
V + L+ G +P+
Sbjct: 199 VTVWELMTFGAKPY 212
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 58/243 (23%), Positives = 93/243 (38%), Gaps = 60/243 (24%)
Query: 104 LGHGQFGYTYVA--TDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
LG G FG Y T VA+K +++N P ++ ++E
Sbjct: 13 LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--------------EPKVQQEFRQE 58
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK---KDSRYTEKDAAV 215
+++ L H N+V + + E G+L + ++ D D V
Sbjct: 59 AELMSDLQ-HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV 117
Query: 216 V----VRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
L +A + +L H VHRD+ N L E ++K +DFGLS
Sbjct: 118 KSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCL---VGEGLTVKISDFGLS--- 171
Query: 265 KPGKKFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRR 310
+DI + YY + PE +L K ESD+WS GV+ + I G +
Sbjct: 172 ------RDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQ 225
Query: 311 PFW 313
P++
Sbjct: 226 PYY 228
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|204523 pfam10591, SPARC_Ca_bdg, Secreted protein acidic and rich in cysteine Ca binding region | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 479 TLHVHQLEEHDSEK-WHLRSQAAFEKF---DIDRDGFITPEELR-MHTGLKGS---IDPL 530
H +L + D +K + + F D + DG+++ EL + L I P
Sbjct: 33 VDHYSELLKRDEQKNYPMCKDPLGWMFNQLDTNHDGYLSRSELAPLRAPLVPMEHCIKPF 92
Query: 531 LEEADIDKDGRISLSEFRR 549
+ D DKDG ISL E+ +
Sbjct: 93 FKSCDADKDGLISLREWCK 111
|
The SPARC_Ca_bdg domain of Secreted Protein Acidic and Rich in Cysteine is responsible for the anti-spreading activity of human urothelial cells. It is rich in alpha-helices. This extracellular calcium-binding domain contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2. Length = 112 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 53/235 (22%), Positives = 97/235 (41%), Gaps = 41/235 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+GK+LG G+FG + +VAVK ++ + + ++ + +E+
Sbjct: 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMK-----LDIHTYSE--------IEEF 48
Query: 156 KREVKILQALAGHENVVKFYN-AFEDDNYVYIAMELC-----EGGELLDRILAKKDSRYT 209
E ++ H NV+K FE + I + + G+L +L SR
Sbjct: 49 LSEAACMKDFD-HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLY---SRLG 104
Query: 210 EKDAAVVVRQMLRVAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+ ++ +L+ + L +HRD+ N + + ED ++ DFGLS
Sbjct: 105 GLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVADFGLSK 161
Query: 263 FIKPGKKFQDIVGSAY---YVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 312
I G ++ + ++A E L R +SDVW+ GV + I G+ P+
Sbjct: 162 KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPY 216
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|238155 cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Query: 469 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 526
D E H +L++ F + D + DG ++ EL +
Sbjct: 22 HEDLKERDELEKHKLRLKKSLYPMCKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHC 81
Query: 527 IDPLLEEADIDKDGRISLSE 546
I P E D+DKDG ISL E
Sbjct: 82 IKPFFESCDLDKDGSISLDE 101
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. Length = 116 |
| >gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 3e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 509 DGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
G IT EEL+ G+ S +D L E D D DG+IS EF LL+
Sbjct: 2 KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQ 51
|
Length = 53 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 37.3 bits (88), Expect = 4e-04
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 498 QAAFEKFDIDRDGFITPEELR 518
+ F +FD + DG I+ EEL+
Sbjct: 2 KDLFRQFDTNGDGKISKEELK 22
|
Length = 25 |
| >gnl|CDD|226699 COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 6e-04
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
V R + A H HG V D+ +FL + + + F ++ G VG
Sbjct: 122 VARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA---NGTLHLCPVG 178
Query: 276 SAYYVAPEVLKRKS------GPESDVWSIGVITY-ILLCGRRPF 312
+ + PE+ S D + + V+ + +L GR P+
Sbjct: 179 VSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY 222
|
Length = 637 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 7e-04
Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 186 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA---ECHLHGLVHRDMKPENF 242
+ ME C G+L + + + + D + R +A H + +H D+ N
Sbjct: 72 LVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNC 131
Query: 243 LFKSAKEDSSLKATDFGLSD-------FIKPGKKFQDIVGSAYYVAPEVLKRKSG----- 290
L + D ++K D+GLS ++ P + + + ++APE++ G
Sbjct: 132 LLTA---DLTVKIGDYGLSHNKYKEDYYVTPDQLWVPL----RWIAPELVDEVHGNLLVV 184
Query: 291 ---PESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNK 328
ES+VWS+GV + L G +P+ +++ + +R +
Sbjct: 185 DQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ 226
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 7e-04
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAK 444
+LR+ F D D +G IS EE+R+AL
Sbjct: 1 ELREAFKLFDKDGDGYISAEELRKALRS 28
|
Length = 30 |
| >gnl|CDD|205383 pfam13202, EF_hand_3, EF hand | Back alignment and domain information |
|---|
Score = 36.1 bits (85), Expect = 0.001
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQAL 442
L+D F D + +G IS EE+++ L
Sbjct: 1 LKDLFRQFDTNGDGKISKEELKRLL 25
|
Length = 25 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.001
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 26/106 (24%)
Query: 233 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE--------- 283
VHRD+ N L E+ +K DFGLS ++I + YY A E
Sbjct: 152 VHRDLATRNCL---VGENMVVKIADFGLS---------RNIYSADYYKASENDAIPIRWM 199
Query: 284 ----VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+ + ESDVW+ GV+ + I G +P++ + + V
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV 245
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair | Back alignment and domain information |
|---|
Score = 36.6 bits (85), Expect = 0.002
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 442
++ L++ D+E + F+ ID D +G IS EE +A+
Sbjct: 10 YIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60
|
Length = 60 |
| >gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.002
Identities = 76/339 (22%), Positives = 128/339 (37%), Gaps = 61/339 (17%)
Query: 10 VSGSNSGSNNNNANH--HRNANKEEAKR------RHNHHARNDTTHKHQHQHQERAKNYQ 61
NS NN+A+ + + A+R R + + K +
Sbjct: 26 ALSGNSPKANNSASTGQTTSRSTNSARRSGSKRDRETATSTDSGRTKSHEGAATTKQATT 85
Query: 62 QLKTKQHQKTNSRRQ--TGVIPCGKRTD------FGYDKDFD-RRYTIGKLLGHGQFGYT 112
T +++ T +P R + G D D +R+ I LLG G FG
Sbjct: 86 TPTTNVEVAPPPKKKKVTYALPNQSREEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKV 145
Query: 113 YVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-----AG 167
A D+ + AVK ++R V P D K E++ ++ + A
Sbjct: 146 VEAWDRKRKEYCAVK-------IVRNV---------PKYTRDAKIEIQFMEKVRQADPAD 189
Query: 168 HENVVKFYNAFEDDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
++K F+++ ++ I M G LLD I+ K ++ + A ++ Q
Sbjct: 190 RFPLMKIQRYFQNETGHMCIVMPK-YGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDY 246
Query: 227 CH--LHGLVHRDMKPENFLFKSAK-------------EDSSLKATDFGLSDFIKPGKKFQ 271
H LH L+H D+KPEN L +++ + ++ D G
Sbjct: 247 FHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLG--GCCDERHSRT 303
Query: 272 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR 309
IV + +Y +PEV L +D+WS+G I Y L G+
Sbjct: 304 AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK 342
|
Length = 467 |
| >gnl|CDD|200946 pfam00036, efhand, EF hand | Back alignment and domain information |
|---|
Score = 35.9 bits (84), Expect = 0.002
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAK 444
+L++ F D D +G IS EE ++ L K
Sbjct: 1 ELKEAFKEFDKDGDGKISFEEFKELLKK 28
|
The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 45/229 (19%)
Query: 80 IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVV 139
+P R +F D +G++LG G FG V A G + +++ +++V
Sbjct: 26 LPYDSRWEFPRD-----GLVLGRILGSGAFGK--VVEGTAYG-------LSRSQPVMKVA 71
Query: 140 SFQDLKMILPIAVEDVKR----EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGE 195
+KM+ P A K+ E+KI+ L H N+V A +YI E C G+
Sbjct: 72 ----VKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGD 127
Query: 196 LLDRILAKKD---SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL---FKSAKE 249
L++ + +D SR+ EK + + G+ D +++ F++ +
Sbjct: 128 LVNYLHKNRDNFLSRHPEKP-----------KKDLDIFGINPADESTRSYVILSFENKGD 176
Query: 250 DSSLKATD---FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDV 295
+K D + IK K+ DI S Y K +S+V
Sbjct: 177 YMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPAS---YKGSNDSEV 222
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
V+RQ+L + H G+VHRD+KPEN L D +K DFG + + G F + G
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYG 370
Query: 276 --SAYYVAPEVL 285
Y PE L
Sbjct: 371 MLDPRYSPPEEL 382
|
Length = 507 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.002
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 29/127 (22%)
Query: 170 NVVKFYNAFEDDNYVYIA-------------MELCEGGELLDRILAKKDSRYTEKDAAVV 216
N +F F+DD VY+ ME +G ++ D K ++ A ++
Sbjct: 214 NAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELL 273
Query: 217 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
VR Q+LR G H D P N L + D + DFG+ + P KF+
Sbjct: 274 VRAFLRQLLR-------DGFFHADPHPGNIL---VRSDGRIVLLDFGIVGRLDP--KFRR 321
Query: 273 IVGSAYY 279
+
Sbjct: 322 YLAELLL 328
|
Length = 517 |
| >gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif | Back alignment and domain information |
|---|
Score = 35.4 bits (83), Expect = 0.002
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 498 QAAFEKFDIDRDGFITPEELRM 519
+ AF FD D DG I EE +
Sbjct: 3 KEAFRLFDKDGDGKIDFEEFKD 24
|
EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29 |
| >gnl|CDD|223554 COG0478, COG0478, RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.002
Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 36/188 (19%)
Query: 89 GYD----KDFDRR---YTIGKLLGHGQFGYTYVATDKANGDRVAVK----------KIEK 131
GYD +R IG +G G+ YVA D G +VAVK K+++
Sbjct: 77 GYDALALHALVKRGIVEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKR 135
Query: 132 NKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE-NVVKFYNAFEDDNYVYIAMEL 190
N+ ++ ++ L ++ +RE + LQ L V K N + ME
Sbjct: 136 NR---DYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPI----AWNRHAVVMEY 188
Query: 191 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250
EG EL R ++ ++ ++L + + G+VH D+ N L ED
Sbjct: 189 IEGVEL-------YRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNIL---VTED 238
Query: 251 SSLKATDF 258
+ D+
Sbjct: 239 GDIVVIDW 246
|
Length = 304 |
| >gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Score = 36.0 bits (84), Expect = 0.003
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 420 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA 478
F ++D D +G IS +E R L K L S VL I D + DG +D EF A
Sbjct: 3 QIFRSLDPDGDGLISGDEARPFLGK---SGLPRS-VLAQIWDLADTDKDGKLDKEEFAIA 58
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 574 | |||
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.98 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.95 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.93 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.92 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.91 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.9 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 99.9 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.89 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.87 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.87 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.86 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.85 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 99.84 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.83 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.81 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.81 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.8 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.79 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.78 | |
| PTZ00183 | 158 | centrin; Provisional | 99.78 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.77 | |
| PTZ00184 | 149 | calmodulin; Provisional | 99.77 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| KOG0031 | 171 | consensus Myosin regulatory light chain, EF-Hand p | 99.75 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.74 | |
| KOG0030 | 152 | consensus Myosin essential light chain, EF-Hand pr | 99.73 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 99.7 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.67 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.65 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.65 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.65 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.61 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.61 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.53 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.51 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.47 | |
| KOG0036 | 463 | consensus Predicted mitochondrial carrier protein | 99.46 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.45 | |
| KOG4223 | 325 | consensus Reticulocalbin, calumenin, DNA supercoil | 99.45 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.44 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.43 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.43 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.36 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.33 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.31 | |
| KOG0044 | 193 | consensus Ca2+ sensor (EF-Hand superfamily) [Signa | 99.3 | |
| KOG0038 | 189 | consensus Ca2+-binding kinase interacting protein | 99.26 | |
| PLN02964 | 644 | phosphatidylserine decarboxylase | 99.25 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.24 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.21 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.12 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.12 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.11 | |
| cd05022 | 89 | S-100A13 S-100A13: S-100A13 domain found in protei | 99.09 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.07 | |
| PF13499 | 66 | EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A | 99.06 | |
| KOG0037 | 221 | consensus Ca2+-binding protein, EF-Hand protein su | 99.05 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 99.04 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.03 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 99.02 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.02 | |
| COG5126 | 160 | FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S | 99.0 | |
| KOG0377 | 631 | consensus Protein serine/threonine phosphatase RDG | 98.99 | |
| KOG0027 | 151 | consensus Calmodulin and related proteins (EF-Hand | 98.95 | |
| cd05027 | 88 | S-100B S-100B: S-100B domain found in proteins sim | 98.94 | |
| PTZ00183 | 158 | centrin; Provisional | 98.93 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.91 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.9 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.89 | |
| KOG0034 | 187 | consensus Ca2+/calmodulin-dependent protein phosph | 98.89 | |
| cd05026 | 93 | S-100Z S-100Z: S-100Z domain found in proteins sim | 98.87 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.85 | |
| PTZ00184 | 149 | calmodulin; Provisional | 98.83 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.83 | |
| cd00213 | 88 | S-100 S-100: S-100 domain, which represents the la | 98.83 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.78 | |
| cd05031 | 94 | S-100A10_like S-100A10_like: S-100A10 domain found | 98.74 | |
| KOG0028 | 172 | consensus Ca2+-binding protein (centrin/caltractin | 98.74 | |
| cd05025 | 92 | S-100A1 S-100A1: S-100A1 domain found in proteins | 98.74 | |
| cd05023 | 89 | S-100A11 S-100A11: S-100A11 domain found in protei | 98.74 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.74 | |
| cd05029 | 88 | S-100A6 S-100A6: S-100A6 domain found in proteins | 98.74 | |
| cd00252 | 116 | SPARC_EC SPARC_EC; extracellular Ca2+ binding doma | 98.7 | |
| smart00027 | 96 | EH Eps15 homology domain. Pair of EF hand motifs t | 98.69 | |
| cd00052 | 67 | EH Eps15 homology domain; found in proteins implic | 98.69 | |
| PF13833 | 54 | EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A | 98.68 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.68 |
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-63 Score=474.26 Aligned_cols=278 Identities=35% Similarity=0.611 Sum_probs=247.2
Q ss_pred CCCcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc
Q 008197 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166 (574)
Q Consensus 87 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~ 166 (574)
.....+.+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+...... +. .......+.+|++||++|
T Consensus 163 ~~~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~-------s~-~~~~~~~v~~EieILkkL- 233 (475)
T KOG0615|consen 163 SKVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC-------SR-AIAKTRDVQNEIEILKKL- 233 (475)
T ss_pred ccCccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc-------cc-cccchhhhHHHHHHHHhc-
Confidence 344556688899999999999999999999999999999999988643211 00 011233478999999999
Q ss_pred CCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 167 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
+|||||+++++|+.++..||||||++||+|++.+..+ +.+.+...+.+++||+.|+.|||++||+||||||+|||+..
T Consensus 234 ~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~ 311 (475)
T KOG0615|consen 234 SHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSN 311 (475)
T ss_pred CCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEecc
Confidence 5999999999999999999999999999999999654 67889999999999999999999999999999999999997
Q ss_pred CCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCC----CCCcchHhHHHHHHHHHhCCCCCCCCChhH-HH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDG-IF 321 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~ 321 (574)
..++..+||+|||+|+.........+.||||.|.|||++.+.. ..++|+||+|||||-+++|.+||.+...+. ..
T Consensus 312 ~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~ 391 (475)
T KOG0615|consen 312 DAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK 391 (475)
T ss_pred CCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH
Confidence 6677999999999999998888889999999999999997542 458999999999999999999998876665 88
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 322 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
++|.++...+..+.|..+++++.+||.+||.+||++|||++++|+||||+....
T Consensus 392 eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 392 EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 999999999999999999999999999999999999999999999999997643
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-59 Score=421.11 Aligned_cols=298 Identities=32% Similarity=0.656 Sum_probs=268.8
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.+.|++.+.||+|+|+.||++.+..+|+.+|+|++...+. .....+.+.+|++|.+.|+ |||||
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~-------------~~~~~e~l~rEarIC~~Lq-HP~Iv 73 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-------------SARDFQKLEREARICRKLQ-HPNIV 73 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhh-------------ccccHHHHHHHHHHHHhcC-CCcEe
Confidence 366789999999999999999999999999999999876532 2235678999999999995 99999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++.+.+...+..|||+|++.|++|..-+... .-+++..+-.+++||+++|.|+|.+||||||+||+|+|+.+.....-
T Consensus 74 rL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 74 RLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred ehhhhhcccceeEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCc
Confidence 9999999999999999999999998877654 46899999999999999999999999999999999999998777889
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||+|..+..+......+|||.|||||++.. +++.++|||+.|||||-|+.|++||++.+...+++.|+.+..++
T Consensus 152 vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~ 231 (355)
T KOG0033|consen 152 VKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDY 231 (355)
T ss_pred eeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCC
Confidence 99999999999887777788999999999999875 56889999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC-CCCCCccHHHHHHHHhhhhhhhhhHHHHhhhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIPIDISVLNNMRQFVKYSRLKQFALRALA 407 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~-~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~ 407 (574)
+.+.|+.+++++++||++||..||.+|+|+.++|+|||+.+... .+.+.++ ..+..|++|....+++..++..+.
T Consensus 232 ~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~-dtvd~lrkfNarRKLKgavLtav~ 307 (355)
T KOG0033|consen 232 PSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQ-DTVDCLKKFNARRKLKGAILTTVI 307 (355)
T ss_pred CCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhH-HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997543 3334433 457889999999999998887664
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-57 Score=456.88 Aligned_cols=257 Identities=36% Similarity=0.648 Sum_probs=235.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|..++.||+|+|+.||.+++..+|..||+|++.+..+ ..+...+.+.+||+|.+.| .|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l------------~k~~~reKv~~EIeIHr~L-~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL------------KKPKQREKVLNEIEIHRSL-KHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHh------------cCcchHHHHHHHHHHHHhc-CCCcEEeee
Confidence 579999999999999999999999999999999988632 2245678899999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|++.+++|||+|+|..++|..++. ..++++|.+++.+++||+.||.|||+++|||||||..|+||+ ++.+|||
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~---~~~~VKI 159 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN---ENMNVKI 159 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec---CcCcEEe
Confidence 99999999999999999999998774 557899999999999999999999999999999999999999 5889999
Q ss_pred EeeccccccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||||..+.. +....+.||||.|+|||++.. ..+..+||||+|||+|-||+|++||...+..+.+..|......++.
T Consensus 160 gDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~ 239 (592)
T KOG0575|consen 160 GDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS 239 (592)
T ss_pred cccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc
Confidence 99999998874 477789999999999999875 4589999999999999999999999999999999999988766654
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+|.++++||..||+.||.+|||++++|.|+||+...
T Consensus 240 ----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~ 276 (592)
T KOG0575|consen 240 ----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGF 276 (592)
T ss_pred ----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCC
Confidence 6899999999999999999999999999999996554
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-56 Score=428.38 Aligned_cols=257 Identities=31% Similarity=0.594 Sum_probs=232.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++++.||+|+||+||+++.+.+++.+|+|++++..... ....+....|..||..+ +||.||+++
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~------------~~e~~~~~~Er~IL~~v-~hPFiv~l~ 91 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVE------------KKEVRHTKAERNILSKI-KHPFIVKLI 91 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhh------------hhhHHHHHHHHHHHHhC-CCCcEeeeE
Confidence 57999999999999999999999999999999999875432 23567889999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
-.|++.+.+|+|+||+.||+|+.+| ++.+.|++..++.++..|+.||.|||+.|||||||||+||||+ .+|+|+|
T Consensus 92 ysFQt~~kLylVld~~~GGeLf~hL--~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd---~~GHi~L 166 (357)
T KOG0598|consen 92 YSFQTEEKLYLVLDYLNGGELFYHL--QREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD---EQGHIKL 166 (357)
T ss_pred EecccCCeEEEEEeccCCccHHHHH--HhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec---CCCcEEE
Confidence 9999999999999999999999988 5568999999999999999999999999999999999999999 6999999
Q ss_pred Eeeccccc-cCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+. ...+....++|||+.|||||++.+ .++.++|+|||||++|+|++|.+||.+.+...++.+|..++...+.
T Consensus 167 tDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p 246 (357)
T KOG0598|consen 167 TDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP 246 (357)
T ss_pred eccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC
Confidence 99999984 455566778999999999998765 5789999999999999999999999999999999999998733332
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCC----CHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rp----s~~~~l~hp~~~~~ 373 (574)
..++.++++||+++|+.||++|. ++.++-.||||+..
T Consensus 247 ---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 247 ---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred ---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence 23789999999999999999996 68899999999974
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=446.92 Aligned_cols=323 Identities=53% Similarity=0.907 Sum_probs=285.5
Q ss_pred cccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
....+...|.+.+.||.|.||.||+++++.+|+.+|+|.+.+... ......+.+.+|+.||++|..||
T Consensus 29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~------------~~~~~~~~v~~Ev~il~~l~~hp 96 (382)
T KOG0032|consen 29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKL------------RGKEDREDVRREVAILQQLSGHP 96 (382)
T ss_pred ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhc------------cccccHHHHHHHHHHHHhccCCC
Confidence 345567789999999999999999999999999999999988632 11224578999999999997799
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
|||.++++|++...+++|||+|.||.|++.+... .+++..+..++.||+.|+.|||+.||+||||||+|+|+.....
T Consensus 97 niv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~ 173 (382)
T KOG0032|consen 97 NIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDE 173 (382)
T ss_pred CEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccC
Confidence 9999999999999999999999999999999766 3999999999999999999999999999999999999997543
Q ss_pred -CCCeEEEeeccccccCCCCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 250 -DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 250 -~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
++.+|++|||+|............+||+.|+|||++. ..++..+||||+||++|.|++|.+||++.+......+|..+
T Consensus 174 ~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~ 253 (382)
T KOG0032|consen 174 GSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG 253 (382)
T ss_pred CCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC
Confidence 4689999999999988877788999999999999998 67899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhhc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 407 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~ 407 (574)
...|....|+.++..+++||.+||..||.+|+|+.++|+|||++........+........++++...+++++..+....
T Consensus 254 ~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (382)
T KOG0032|consen 254 DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLA 333 (382)
T ss_pred CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999876666666666666666677666666665555444
Q ss_pred cccchHHhhhhccccccccCCCC
Q 008197 408 STLDDEELADLRDQFDAIDVDKN 430 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~ 430 (574)
...+ +..++..|..+|.+.+
T Consensus 334 ~~~~---~~~~~~~~~~~~~~~~ 353 (382)
T KOG0032|consen 334 ESLS---ISGLKEMFKLMDTDNN 353 (382)
T ss_pred hhhh---HHHHHHHHHhhccccc
Confidence 4444 7788888999998877
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-55 Score=407.96 Aligned_cols=254 Identities=31% Similarity=0.587 Sum_probs=232.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|++++.||.|+||+|-+++++.+|..+|+|++.+.... .-...+...+|.++|+.+. ||++++++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vV------------klKQveH~~nEk~vL~~v~-~PFlv~l~ 110 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVV------------KLKQVEHTHNEKRVLKAVS-HPFLVKLY 110 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHH------------HHHHHHHHhhHHHHHhhcc-CceeEEEE
Confidence 4689999999999999999999999999999999887432 2245678999999999995 99999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+.|.+.+.+|+||||++||.|+.++ ++.++|++..++.++.||+.||+|||+++|++|||||+||||+ .+|.+||
T Consensus 111 ~t~~d~~~lymvmeyv~GGElFS~L--rk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD---~~G~iKi 185 (355)
T KOG0616|consen 111 GTFKDNSNLYMVMEYVPGGELFSYL--RKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD---QNGHIKI 185 (355)
T ss_pred EeeccCCeEEEEEeccCCccHHHHH--HhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec---cCCcEEE
Confidence 9999999999999999999999988 5568999999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||+|+.+... +.+.||||.|+|||++.. .++.++|+|||||++|||+.|.+||.+.++..++.+|+.++..|+
T Consensus 186 tDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP-- 261 (355)
T KOG0616|consen 186 TDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP-- 261 (355)
T ss_pred EeccceEEecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC--
Confidence 999999987643 678999999999998875 468889999999999999999999999999999999999998877
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.+++++++||..+|++|-.+|. ...++..||||+..
T Consensus 262 --~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 262 --SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred --cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 46889999999999999999994 57789999999964
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-55 Score=416.89 Aligned_cols=255 Identities=30% Similarity=0.441 Sum_probs=224.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+.+.+..||+|+.|+||+++|+.|++.+|+|++... ..+....++.+|++|++.. +||+||++|+
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--------------~~~~~~~Qi~rEl~il~~~-~spyIV~~yg 144 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--------------IDPALQKQILRELEILRSC-QSPYIVGFYG 144 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--------------CCHHHHHHHHHHHHHHhhC-CCCCeeeEeE
Confidence 567788999999999999999999999999999543 3356778999999999999 6999999999
Q ss_pred EEEcCC-EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
.|..++ .++|+||||.||+|.+.+.. .+++++.....++.+++.||.|||. ++||||||||+|||+++ .|.||
T Consensus 145 aF~~~~~~isI~mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs---kGeVK 219 (364)
T KOG0581|consen 145 AFYSNGEEISICMEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS---KGEVK 219 (364)
T ss_pred EEEeCCceEEeehhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc---CCCEE
Confidence 999988 59999999999999987743 3789999999999999999999996 89999999999999994 89999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCC-----ChhHHHHHHHhCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK-----TEDGIFKEVLRNK 328 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~-----~~~~~~~~i~~~~ 328 (574)
|||||.|..+..+ ...+.+||..|||||.+.+ .|+.++||||||++++|+++|+.||... ...+++..|+.+.
T Consensus 220 icDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p 298 (364)
T KOG0581|consen 220 ICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP 298 (364)
T ss_pred eccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC
Confidence 9999999877655 5578899999999999987 5789999999999999999999999764 4556777777754
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
++-.+. ..+|+++++||..||++||.+|||++|+++|||++...
T Consensus 299 pP~lP~--~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 299 PPRLPE--GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred CCCCCc--ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 332211 24899999999999999999999999999999999754
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-54 Score=417.17 Aligned_cols=262 Identities=32% Similarity=0.614 Sum_probs=233.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|.+.+.||.|+||+||+|+++.++..||||.+.+.. ......+.+..|+.||+.| +|||||.++
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~-------------l~~k~~e~L~~Ei~iLkel-~H~nIV~l~ 75 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK-------------LNKKLVELLLSEIKILKEL-KHPNIVRLL 75 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhc-------------cCHHHHHHHHHHHHHHHhc-CCcceeeEE
Confidence 47999999999999999999999999999999998752 2345677889999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC---CC
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED---SS 252 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~---~~ 252 (574)
+++.+++.+|||||||.||+|.+++.. .+.+++..++.++.||+.||++||+++||||||||+||||.....+ ..
T Consensus 76 d~~~~~~~i~lVMEyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 76 DCIEDDDFIYLVMEYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred EEEecCCeEEEEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCce
Confidence 999999999999999999999999944 4689999999999999999999999999999999999999864222 68
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhh-hcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||+|+...++....+.||+|.|||||++ ..+|+-|+|+||+|+|+|+|++|++||...+..+++..+.++....
T Consensus 154 LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~ 233 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIV 233 (429)
T ss_pred EEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccccc
Confidence 999999999999988888899999999999998 6789999999999999999999999999999999888776655433
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+..+ ..+++...+|+...|..+|..|.+..+-+.|+++....
T Consensus 234 ~~~~-~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 234 PVLP-AELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred Cchh-hhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 3222 34567778999999999999999999999999988643
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-55 Score=431.83 Aligned_cols=258 Identities=37% Similarity=0.669 Sum_probs=233.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|.+++.||.|+|++|++|+++.+++.||||++.+..+. .+.....+..|-.+|.+|.+||.|++||
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Ii------------ke~KvkYV~~Ek~~l~~L~~hPgivkLy 140 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYII------------KEKKVKYVTREKEALTQLSGHPGIVKLY 140 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHH------------hhcccchhhHHHHHHHHhhCCCCeEEEE
Confidence 4799999999999999999999999999999999886432 1234567889999999998899999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
-.|+++..+|+|+||+++|+|+++| .+.+.|++..++.++.+|+.||+|||++|||||||||+||||+ .++++||
T Consensus 141 ~TFQD~~sLYFvLe~A~nGdll~~i--~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd---~dmhikI 215 (604)
T KOG0592|consen 141 FTFQDEESLYFVLEYAPNGDLLDLI--KKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD---KDGHIKI 215 (604)
T ss_pred EEeecccceEEEEEecCCCcHHHHH--HHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc---CCCcEEE
Confidence 9999999999999999999999999 4558899999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccCCCCC--------------ccccccCccccchHhhhcCC-CCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 256 TDFGLSDFIKPGKK--------------FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--------------~~~~~gt~~y~aPE~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
+|||.|+.+.+... ...++||..|.+||+|...+ ++.+|+|+||||||+|+.|.+||.+.++-.+
T Consensus 216 TDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli 295 (604)
T KOG0592|consen 216 TDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI 295 (604)
T ss_pred eeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH
Confidence 99999987643211 14589999999999998765 8899999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+++|+.-...|+ +.+++.+.+||+++|..||.+|+|+.+|.+||||....
T Consensus 296 FqkI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 296 FQKIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred HHHHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 999998877766 56889999999999999999999999999999998753
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-54 Score=425.90 Aligned_cols=259 Identities=32% Similarity=0.575 Sum_probs=230.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.++..||+|+||.||+|+.+.||..+|+|++++..+ .....++.++.|-+||... ++|+||++|
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M------------~~~~Qv~hV~aERdiL~~~-ds~~vVKLy 207 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM------------LKKNQVEHVRAERDILAEV-DSPWVVKLY 207 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH------------HhhhhHHHHHHHHHHhhhc-CCCcEEEEE
Confidence 579999999999999999999999999999999999743 3335678899999999996 799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
-.|++..++||||||++||++...|. +.+.|++..++.++.+++.|++.||.+|+|||||||+|+||| ..|++||
T Consensus 208 YsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD---~~GHiKL 282 (550)
T KOG0605|consen 208 YSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID---AKGHIKL 282 (550)
T ss_pred EEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec---CCCCEee
Confidence 99999999999999999999999884 457899999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccCC----------------------C--C-----C-------------------ccccccCccccchHhhhc
Q 008197 256 TDFGLSDFIKP----------------------G--K-----K-------------------FQDIVGSAYYVAPEVLKR 287 (574)
Q Consensus 256 ~DFG~a~~~~~----------------------~--~-----~-------------------~~~~~gt~~y~aPE~~~~ 287 (574)
+|||||.-+.. . . . ....+|||.|||||++.+
T Consensus 283 SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~ 362 (550)
T KOG0605|consen 283 SDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG 362 (550)
T ss_pred ccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc
Confidence 99999842210 0 0 0 012589999999999876
Q ss_pred C-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHH
Q 008197 288 K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQ 363 (574)
Q Consensus 288 ~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~ 363 (574)
. |+..+|+||||||+||||.|.+||.+.++.+++++|++....+..+.-..+++++.|||.+||+ ||.+|.. ++|
T Consensus 363 kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E 441 (550)
T KOG0605|consen 363 KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE 441 (550)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence 4 6899999999999999999999999999999999999988666666666788999999999999 9999985 999
Q ss_pred HhcCcccccc
Q 008197 364 ALSHPWVREG 373 (574)
Q Consensus 364 ~l~hp~~~~~ 373 (574)
|..||||+..
T Consensus 442 IK~HPfF~~v 451 (550)
T KOG0605|consen 442 IKKHPFFKGV 451 (550)
T ss_pred HhcCCccccC
Confidence 9999999975
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-54 Score=434.69 Aligned_cols=257 Identities=33% Similarity=0.622 Sum_probs=235.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++++.||.|+-|.|.+|++..||+.+|||++.+.. .........+.+|+-||+.| .|||++++|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~------------~~s~s~~~~IerEIviMkLi-~HpnVl~Ly 78 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRS------------ELSSSQPAGIEREIVIMKLI-EHPNVLRLY 78 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeecccc------------ccccccccchhhhhHHHHHh-cCCCeeeee
Confidence 46899999999999999999999999999999998762 22234456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|++..++|+|.||++||.|++++..+ +++++.+++.+++||+.|+.|||..+|+||||||+|+||+. .+++||
T Consensus 79 dVwe~~~~lylvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~---~~nIKI 153 (786)
T KOG0588|consen 79 DVWENKQHLYLVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV---KNNIKI 153 (786)
T ss_pred eeeccCceEEEEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc---ccCEee
Confidence 9999999999999999999999999654 78999999999999999999999999999999999999994 566999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|..-.++.-..+.||+|.|.|||++.|.. +.++||||+|||||.||||++||.+.+...++.++.++....+
T Consensus 154 ADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP- 232 (786)
T KOG0588|consen 154 ADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP- 232 (786)
T ss_pred eccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-
Confidence 9999999888888888999999999999998864 7899999999999999999999999999999999999887665
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+|.++++||.+||.+||.+|+|..+|++|||+....
T Consensus 233 ---s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 233 ---SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ---CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 57899999999999999999999999999999998654
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-55 Score=397.69 Aligned_cols=272 Identities=31% Similarity=0.595 Sum_probs=244.9
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+.+-..|.-.+.||.|..+.|.++.++.+|..+|+|++........ ........+....|+.||+++.+||+|
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~-------~e~~~~~~EaT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTES-------GETPYEMREATRQEISILRQVMGHPYI 85 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccC-------CccHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 3455568888899999999999999999999999999976432111 111234456778999999999999999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++.++|+++..+++|+|.|+.|.|+|+|.. .-.+|+...+.|++|+++|++|||..+||||||||+|||++ ++.
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld---dn~ 160 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD---DNM 160 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec---ccc
Confidence 9999999999999999999999999999944 35799999999999999999999999999999999999999 588
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc-------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
++||+|||+|+.+.++......||||+|+|||.+.. .|+..+|+||+|||+|-|+.|.+|||.....-+++.|
T Consensus 161 ~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~I 240 (411)
T KOG0599|consen 161 NIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMI 240 (411)
T ss_pred ceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHH
Confidence 999999999999999999999999999999998853 3577899999999999999999999999999999999
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+.++..|..+.|.++|...++||.+||++||.+|+|++++|.||||.....
T Consensus 241 meGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~ 291 (411)
T KOG0599|consen 241 MEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ 291 (411)
T ss_pred HhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence 999999999999999999999999999999999999999999999976543
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-53 Score=427.08 Aligned_cols=261 Identities=38% Similarity=0.710 Sum_probs=231.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+.|.+++.||+|+||+|+.|.+..+|..||||++.+..... .. ....+.+.+|+.+++.+..||||++
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~---------~~-~~~~~~i~rEi~~~~~~~~HpnI~~ 84 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS---------KS-QKLDELIKREISILRRLRSHPNIIR 84 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccc---------cc-cccchhhHHHHHHHHHhccCCCEeE
Confidence 3468999999999999999999999999999999776642110 01 1234567799999999966999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC-CC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-SS 252 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~-~~ 252 (574)
+++++.....+|+|||||.||+|++++.. .+++++..++.+++||+.|++|||++||+||||||+|||++. + ++
T Consensus 85 l~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~---~~~~ 159 (370)
T KOG0583|consen 85 LLEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDG---NEGN 159 (370)
T ss_pred EEEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecC---CCCC
Confidence 99999999999999999999999999965 588999999999999999999999999999999999999994 4 89
Q ss_pred eEEEeecccccc-CCCCCccccccCccccchHhhhcC--C-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK--S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~--~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||++... .......+.|||+.|+|||++.+. | +.++||||+||+||.|++|+.||.+.+...++..|..+.
T Consensus 160 ~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~ 239 (370)
T KOG0583|consen 160 LKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE 239 (370)
T ss_pred EEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC
Confidence 999999999988 466677889999999999999874 4 688999999999999999999999999999999988877
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~-~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
..++. .+ |+++++|+.+||..||.+|+|+.+++.||||+..
T Consensus 240 ~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 240 FKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred ccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 66553 34 9999999999999999999999999999999973
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-54 Score=396.71 Aligned_cols=258 Identities=29% Similarity=0.528 Sum_probs=220.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|+.+.++|+|+||.||+++++.||+.||||++.... ..+.-.+-..+|+++|++|. |||+|.++
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-------------dd~~VkKIAlREIrmLKqLk-H~NLVnLi 67 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-------------DDPVVKKIALREIRMLKQLK-HENLVNLI 67 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-------------ccHHHHHHHHHHHHHHHhcc-cchHHHHH
Confidence 36888999999999999999999999999999986541 12334455789999999995 99999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.....++||+|||+. ++++.|... ...++...++.+++|++.|+.|||++++|||||||+|||+. .++.+||
T Consensus 68 EVFrrkrklhLVFE~~dh-TvL~eLe~~-p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKL 142 (396)
T KOG0593|consen 68 EVFRRKRKLHLVFEYCDH-TVLHELERY-PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKL 142 (396)
T ss_pred HHHHhcceeEEEeeecch-HHHHHHHhc-cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEe
Confidence 999999999999999975 666666443 45689999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccC-CCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh------
Q 008197 256 TDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------ 326 (574)
Q Consensus 256 ~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~------ 326 (574)
||||+|+.+. ++..++.++.|.||+|||++-+ +|++++||||+||++.||++|.+.|.+.+.-+.+..|..
T Consensus 143 CDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~ 222 (396)
T KOG0593|consen 143 CDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLI 222 (396)
T ss_pred ccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccC
Confidence 9999999876 7888899999999999999876 689999999999999999999999998876655444432
Q ss_pred --------CCCCC-----CC--------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 327 --------NKPDF-----RR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 327 --------~~~~~-----~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
..+-| +. ..+|.++.-+.+|++.||..||.+|++.+++|.||||..
T Consensus 223 prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 223 PRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 11111 11 124667888999999999999999999999999999953
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-53 Score=413.58 Aligned_cols=263 Identities=33% Similarity=0.524 Sum_probs=227.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.++++||.|+||.||+|+.+.+|..||||.+++.-. + .....-.+|+..|++|..|||||+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-----s---------~ee~~nLREvksL~kln~hpniik 73 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-----S---------WEECMNLREVKSLRKLNPHPNIIK 73 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-----c---------HHHHHHHHHHHHHHhcCCCCcchh
Confidence 55799999999999999999999999999999999977521 1 122234789999999955999999
Q ss_pred EEEEEEcCC-EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 174 FYNAFEDDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 174 ~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+.+++.+.+ .+|+|||||+ .+|++.+..+ ...|++..++.|++||+.||.|+|.+|+.||||||+|||+.. +..
T Consensus 74 L~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~---~~~ 148 (538)
T KOG0661|consen 74 LKEVIRDNDRILYFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG---NDV 148 (538)
T ss_pred hHHHhhccCceEeeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc---cce
Confidence 999999877 9999999995 5899877655 789999999999999999999999999999999999999984 789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh--cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|||+|||+|+.+.+...++.++.|.||+|||++. +-|+.++||||+|||++|+++-++.|.+.++.+.+.+|+.--..
T Consensus 149 iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGt 228 (538)
T KOG0661|consen 149 IKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGT 228 (538)
T ss_pred eEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999875 45689999999999999999999999999887777766542111
Q ss_pred -----------------CCCC---------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 331 -----------------FRRK---------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 331 -----------------~~~~---------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
|..+ ..+..++++.++|.+||.+||.+||||.++|+||||+....
T Consensus 229 P~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~ 299 (538)
T KOG0661|consen 229 PDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA 299 (538)
T ss_pred CccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence 1111 13457889999999999999999999999999999997543
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-51 Score=404.62 Aligned_cols=261 Identities=28% Similarity=0.472 Sum_probs=224.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+.|+.+++||+|+||.||+|++..+|+.||+|+++.... .+....-..+||.||++| +||||++
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-------------~~~~~~t~~REI~ILr~l-~HpNIik 180 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-------------KEGFPITAIREIKILRRL-DHPNIIK 180 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-------------CCcchHHHHHHHHHHHhc-CCCcccc
Confidence 44579999999999999999999999999999999987521 123445678999999999 6999999
Q ss_pred EEEEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 174 FYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 174 ~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+.+...+. +.+|||+|||+. +|.-++ ....-.|++.+++.++.||+.||+|||.+||+|||||.+||||+ .+|
T Consensus 181 L~eivt~~~~~siYlVFeYMdh-DL~GLl-~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid---n~G 255 (560)
T KOG0600|consen 181 LEEIVTSKLSGSIYLVFEYMDH-DLSGLL-SSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID---NNG 255 (560)
T ss_pred eeeEEEecCCceEEEEEecccc-hhhhhh-cCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc---CCC
Confidence 99988765 789999999976 666544 34456899999999999999999999999999999999999999 589
Q ss_pred CeEEEeeccccccCCCC--CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 252 SLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.+||+|||||+++.... .++..+.|.||+|||++.| .|+.++|+||+||||.||++|++.|.+.++-+.+..|.+-
T Consensus 256 ~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfkl 335 (560)
T KOG0600|consen 256 VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKL 335 (560)
T ss_pred CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHH
Confidence 99999999999776543 4677899999999999976 5799999999999999999999999999999888888764
Q ss_pred CCCCCCCCCC-------------------------CCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 328 KPDFRRKPWP-------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~-------------------------~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
........|+ .++..+.+|+..||..||.+|.||.++|+|+||...
T Consensus 336 cGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 336 CGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred hCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 4333332232 357788999999999999999999999999999543
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-51 Score=372.36 Aligned_cols=259 Identities=31% Similarity=0.499 Sum_probs=220.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|...+.||+|+||.||+|++..||+.||||+++.... .....-...+|++.|+.+. ||||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-------------kdGi~~talREIK~Lqel~-h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-------------KDGINRTALREIKLLQELK-HPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-------------ccCccHHHHHHHHHHHHcc-Ccchhhhh
Confidence 478899999999999999999999999999999987521 1122345789999999994 99999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|...+.+.||+||++. +|... .+.+...++..+++.|+.+++.||+|||++.|+||||||.|+|++ .++.+||
T Consensus 68 D~F~~~~~l~lVfEfm~t-dLe~v-Ikd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKi 142 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPT-DLEVV-IKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKI 142 (318)
T ss_pred hhccCCCceEEEEEeccc-cHHHH-hcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEe
Confidence 999999999999999974 66554 455667899999999999999999999999999999999999999 4899999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||+|+.+.+... ....+.|.||+|||++.| .|+..+||||.|||+.||+.|.+-|.+.+.-+.+..|.+.-....
T Consensus 143 ADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~ 222 (318)
T KOG0659|consen 143 ADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPT 222 (318)
T ss_pred ecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCC
Confidence 99999998765433 334489999999998865 579999999999999999999999988888777777766433333
Q ss_pred CCCC------------------------CCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 333 RKPW------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 333 ~~~~------------------------~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
...| +..+.++.+|+..||..||.+|+|+.|+|+|+||+..
T Consensus 223 ~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~ 287 (318)
T KOG0659|consen 223 PDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL 287 (318)
T ss_pred cccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence 3333 3356678999999999999999999999999999974
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-51 Score=392.91 Aligned_cols=261 Identities=31% Similarity=0.555 Sum_probs=233.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++++.||+|.-|+||++..+.++..+|+|++.+..+. ......++..|.+||+.+ +||.++.+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~------------~rkKl~Ra~tE~eIL~~l-DHPFlPTLY 143 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA------------SRKKLKRAQTEREILSLL-DHPFLPTLY 143 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHh------------hhhHHHHHHHHHHHHHhc-CCCccchhh
Confidence 4689999999999999999999999999999999987432 123455778899999999 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
..|+.+...|+|||||+||+|...+.++..+.|++..++.++..++.||+|||-.|||+|||||+||||. ++|+|.|
T Consensus 144 a~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr---edGHIML 220 (459)
T KOG0610|consen 144 ASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR---EDGHIML 220 (459)
T ss_pred heeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe---cCCcEEe
Confidence 9999999999999999999999988888899999999999999999999999999999999999999998 6999999
Q ss_pred EeeccccccC-------C----------------------------C----------------------CCccccccCcc
Q 008197 256 TDFGLSDFIK-------P----------------------------G----------------------KKFQDIVGSAY 278 (574)
Q Consensus 256 ~DFG~a~~~~-------~----------------------------~----------------------~~~~~~~gt~~ 278 (574)
+||.|+.... . . .....++||-.
T Consensus 221 sDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThE 300 (459)
T KOG0610|consen 221 SDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHE 300 (459)
T ss_pred eeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccc
Confidence 9999863210 0 0 01123689999
Q ss_pred ccchHhhhcCC-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCC
Q 008197 279 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 357 (574)
Q Consensus 279 y~aPE~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 357 (574)
|.|||++.+.. +.++|+|+|||++|||++|.+||.+.+..+.+.+|+...+.|+.. +.++..++|||+++|.+||++
T Consensus 301 YlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~--~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 301 YLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE--PEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred cccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC--CcchhHHHHHHHHHhccChhh
Confidence 99999998764 899999999999999999999999999999999999998887765 478899999999999999999
Q ss_pred CCC----HHHHhcCccccccC
Q 008197 358 RLT----AAQALSHPWVREGG 374 (574)
Q Consensus 358 Rps----~~~~l~hp~~~~~~ 374 (574)
|.. |.+|.+||||+...
T Consensus 379 Rlg~~rGA~eIK~HpFF~gVn 399 (459)
T KOG0610|consen 379 RLGSKRGAAEIKRHPFFEGVN 399 (459)
T ss_pred hhccccchHHhhcCccccCCC
Confidence 998 99999999999753
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-51 Score=416.53 Aligned_cols=257 Identities=27% Similarity=0.496 Sum_probs=233.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.++++||+|+||+|+++..+.+++.+|||++++..+. ....++....|.+|+.....||.++.++
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il------------~~d~Ve~~~~EkrI~~la~~HPFL~~L~ 435 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDIL------------QRDEVESLMCEKRIFELANRHPFLVNLF 435 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecccee------------ccccHHHHHHHHHHHHHhccCCeEeecc
Confidence 5799999999999999999999999999999999998543 3346788999999999887899999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
..|++.+++|+||||+.||++..+ +....|++..++.|+..|+.||.|||++||||||||.+||||| ..|++||
T Consensus 436 ~~fQT~~~l~fvmey~~Ggdm~~~---~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---~eGh~ki 509 (694)
T KOG0694|consen 436 SCFQTKEHLFFVMEYVAGGDLMHH---IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---TEGHVKI 509 (694)
T ss_pred cccccCCeEEEEEEecCCCcEEEE---EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---ccCcEEe
Confidence 999999999999999999995432 4557899999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+++..- .+..+.++||||.|||||++.+ .|+.++|+|||||+|||||.|..||.+.++++++..|+...+.++.
T Consensus 510 ADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~ 589 (694)
T KOG0694|consen 510 ADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR 589 (694)
T ss_pred cccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 9999998643 5667889999999999999875 5789999999999999999999999999999999999998877663
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCccccccC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG 374 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~~ 374 (574)
.+|.++.++++++|.++|++|.. +.+|..||||+...
T Consensus 590 ----~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 590 ----FLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred ----cccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 58999999999999999999985 57899999999753
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-51 Score=400.00 Aligned_cols=271 Identities=32% Similarity=0.596 Sum_probs=230.1
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
.-++|++++.||+|.||+|-+|++..+++.||||++.+........... .........+.+.+||.||++| +|||||+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~-~~a~~~~~~ekv~~EIailKkl-~H~nVV~ 172 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPR-QPAMKLMPIEKVRREIAILKKL-HHPNVVK 172 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhccccc-ccccccCcHHHHHHHHHHHHhc-CCcCeeE
Confidence 3468999999999999999999999999999999998876543322222 1222223567899999999999 5999999
Q ss_pred EEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 174 FYNAFED--DNYVYIAMELCEGGELLDRILAKKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 174 ~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++..+ .+.+|||+|||..|.+... ....+ +++.+++.|++.++.||+|||.+|||||||||+|+||+ .+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~~ 246 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---SD 246 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---CC
Confidence 9999987 4689999999999987532 23344 89999999999999999999999999999999999999 47
Q ss_pred CCeEEEeeccccccCCC------CCccccccCccccchHhhhcC-----CCCCcchHhHHHHHHHHHhCCCCCCCCChhH
Q 008197 251 SSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDG 319 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~------~~~~~~~gt~~y~aPE~~~~~-----~~~~~DvwSlG~il~elltg~~Pf~~~~~~~ 319 (574)
++|||+|||.+.....+ ......+|||.|+|||++.+. .+.+.||||+||+||+|+.|+.||.+....+
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~ 326 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE 326 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH
Confidence 99999999998766322 223457999999999987652 2678999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
++.+|+.....|+.. +.+.+.+++||.+||++||.+|++..++..|||.....
T Consensus 327 l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g 379 (576)
T KOG0585|consen 327 LFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG 379 (576)
T ss_pred HHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence 999999988777654 46789999999999999999999999999999998653
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-52 Score=381.33 Aligned_cols=253 Identities=30% Similarity=0.544 Sum_probs=218.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|+|+++||.|+||.||++.+..+|..||.|.+.-. ++.....+.+..|+.+|++| +|||||+++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-------------~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy 84 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-------------MMDAKARQDCVKEISLLKQL-NHPNIVQYY 84 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-------------hccHHHHHHHHHHHHHHHhc-CCchHHHHH
Confidence 4699999999999999999999999999999988743 34556788899999999999 699999999
Q ss_pred E-EEEcCCE-EEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CEeecCCCCcEEEccC
Q 008197 176 N-AFEDDNY-VYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL--HG--LVHRDMKPENFLFKSA 247 (574)
Q Consensus 176 ~-~~~~~~~-~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~--~~--iiHrDlkp~Nill~~~ 247 (574)
+ .|..++. ++||||||.+|+|...+.. +....+++..++.++.|++.||..+|+ .. |+||||||.||+|+
T Consensus 85 ~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~-- 162 (375)
T KOG0591|consen 85 AHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT-- 162 (375)
T ss_pred HHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc--
Confidence 8 5555555 9999999999999987743 345679999999999999999999999 45 99999999999999
Q ss_pred CCCCCeEEEeeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.+|.|||+|||++++...... ..+.+|||.||+||.+.+ +|+.++||||+||++|||+.-.+||.+.+-.++-.+|.
T Consensus 163 -~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~ 241 (375)
T KOG0591|consen 163 -ANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIE 241 (375)
T ss_pred -CCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHH
Confidence 589999999999998876544 357899999999998864 67999999999999999999999999998888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
++.. ++-+-..+|.++..||.-|+.+||..||+. +|++..
T Consensus 242 qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~d 281 (375)
T KOG0591|consen 242 QGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQD 281 (375)
T ss_pred cCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHH
Confidence 8743 222223578899999999999999999986 666554
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-51 Score=407.80 Aligned_cols=254 Identities=30% Similarity=0.572 Sum_probs=228.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||+||+|+.+.+.+.||||.+.+... .......+.+|++|++.| +|||||.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-------------~~k~l~~l~~ev~i~r~l-kHpniv~m~ 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-------------NEKELKNLRQEVRILRSL-KHPNIVEML 67 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-------------chHHHHHHHHHHHHHHhc-CCcchhhHH
Confidence 478999999999999999999999999999999987531 123456789999999999 499999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|++..++|+|+|||.| +|+..+ ...+.++++.++.++.+++.||.|||+++|+|||+||.|||++ ..+.+|+
T Consensus 68 esfEt~~~~~vVte~a~g-~L~~il--~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~---~~~~~Kl 141 (808)
T KOG0597|consen 68 ESFETSAHLWVVTEYAVG-DLFTIL--EQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE---KGGTLKL 141 (808)
T ss_pred HhhcccceEEEEehhhhh-hHHHHH--HhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec---CCCceee
Confidence 999999999999999977 999887 4567899999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
||||+|+....+.. ...+.|||.|||||++.+. |+..+|+||||||+|||++|++||.......+...|......++
T Consensus 142 cdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p- 220 (808)
T KOG0597|consen 142 CDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP- 220 (808)
T ss_pred chhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc-
Confidence 99999998765443 4567899999999998765 58899999999999999999999999998888889988765544
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+.++..+..|++.+|.+||.+|+|+.+++.|||.+..
T Consensus 221 ---~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 221 ---STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred ---ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 4789999999999999999999999999999998864
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=369.38 Aligned_cols=257 Identities=33% Similarity=0.623 Sum_probs=234.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|.||.||+|+.+.++-.||+|++.+..+.. .....++.+|++|-..| .||||+++|
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~------------~~v~~qlrREiEIqs~L-~hpnilrlY 88 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILK------------TQVEHQLRREIEIQSHL-RHPNILRLY 88 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHH------------hcchhhhhheeEeeccc-CCccHHhhh
Confidence 46999999999999999999999999999999998874321 12345789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+...+||++||.+.|+|+..|......++++..+..+++|++.||.|+|..+||||||||+|+|++. .+.+||
T Consensus 89 ~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~lki 165 (281)
T KOG0580|consen 89 GYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGELKI 165 (281)
T ss_pred hheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCCeec
Confidence 99999999999999999999999997778889999999999999999999999999999999999999995 789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||.+.... .....+.|||..|.|||+..+. .+..+|+|++|++.||++.|.+||...+..+.++.|.+....++
T Consensus 166 AdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p-- 242 (281)
T KOG0580|consen 166 ADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP-- 242 (281)
T ss_pred cCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--
Confidence 9999998765 5556788999999999999875 48889999999999999999999999999999999998876665
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+.++..+.++|.+||..+|.+|.+..+++.|||+...
T Consensus 243 --~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 243 --STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred --cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 5789999999999999999999999999999998753
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-51 Score=389.69 Aligned_cols=256 Identities=33% Similarity=0.630 Sum_probs=233.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
...+|++.+.||+|.||+|-+|.+...|+.||||.|++.++ -.+...-.+.+||+||..| |||||+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkI------------kdeqDlvhIRREIeIMSsL-NHPhII~ 117 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKI------------KDEQDLVHIRREIEIMSSL-NHPHIIQ 117 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhc------------ccHHHHHHHHHHHHHHhhc-CCCceee
Confidence 45689999999999999999999999999999999998743 2234556789999999999 7999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+|++|+..+.+.|||||..+|.|++++ ...+.+++.+++.+++||..|+.|||.++++|||||.+|||++ .++++
T Consensus 118 IyEVFENkdKIvivMEYaS~GeLYDYi--Ser~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD---~N~Ni 192 (668)
T KOG0611|consen 118 IYEVFENKDKIVIVMEYASGGELYDYI--SERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD---QNNNI 192 (668)
T ss_pred hhhhhcCCceEEEEEEecCCccHHHHH--HHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec---CCCCe
Confidence 999999999999999999999999999 4457899999999999999999999999999999999999999 58999
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||++..+......+++||+|.|.+||++++.+ ++.+|.|||||+||-|+.|..||.+.+...+.++|..+...
T Consensus 193 KIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr- 271 (668)
T KOG0611|consen 193 KIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR- 271 (668)
T ss_pred eeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc-
Confidence 999999999988888889999999999999999865 78999999999999999999999999999999999877532
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
. |.-|..+.-||+.||-+||.+|.|+.++..|=|+.=
T Consensus 272 -E---P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 272 -E---PETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred -C---CCCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 2 334577899999999999999999999999999873
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-50 Score=405.45 Aligned_cols=260 Identities=31% Similarity=0.534 Sum_probs=225.9
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+....|....+||+|+.|.||.|+...+++.||||.+.... ....+-+.+|+.+|+.+ +|+||
T Consensus 269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~---------------Q~~keLilnEi~Vm~~~-~H~Ni 332 (550)
T KOG0578|consen 269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK---------------QPKKELLLNEILVMRDL-HHPNI 332 (550)
T ss_pred CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc---------------CCchhhhHHHHHHHHhc-cchHH
Confidence 445567999999999999999999999999999999997752 13456689999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
|.+++.|...+.+|+||||++||+|.+.+. ...+++.+++.|++.++.||+|||.+||||||||.+|||++ .++
T Consensus 333 Vnfl~Sylv~deLWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g 406 (550)
T KOG0578|consen 333 VNFLDSYLVGDELWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDG 406 (550)
T ss_pred HHHHHHhcccceeEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCC
Confidence 999999999999999999999999998773 34599999999999999999999999999999999999999 578
Q ss_pred CeEEEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||+|..+.... ...+.+|||+|||||++.. .|++++||||||++++||+-|.+||...++-..+..|.....
T Consensus 407 ~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~ 486 (550)
T KOG0578|consen 407 SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT 486 (550)
T ss_pred cEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC
Confidence 89999999998876544 5578899999999998865 689999999999999999999999997766555555544332
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
. ....+..+|+.+++||.+||+.|+.+|++|.+||+||||+...
T Consensus 487 P-~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 487 P-KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred C-CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 2 2233467999999999999999999999999999999996543
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-50 Score=374.35 Aligned_cols=260 Identities=29% Similarity=0.440 Sum_probs=219.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|+.+..|++|+||.||+|+|+.|++.||+|+++...- +...+ -...+||.+|.+++ |||||.+-
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke----------k~GFP---ItsLREIniLl~~~-H~NIV~vk 141 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE----------KEGFP---ITSLREINILLKAR-HPNIVEVK 141 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc----------cCCCc---chhHHHHHHHHhcC-CCCeeeeE
Confidence 469999999999999999999999999999999976531 11111 23579999999995 99999999
Q ss_pred EEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++... -+.+|||||||+. +|...+. ....+|+..+++.++.|++.||+|||.+.|+||||||+|+|+. ..|.+
T Consensus 142 EVVvG~~~d~iy~VMe~~Eh-DLksl~d-~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~l 216 (419)
T KOG0663|consen 142 EVVVGSNMDKIYIVMEYVEH-DLKSLME-TMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGIL 216 (419)
T ss_pred EEEeccccceeeeeHHHHHh-hHHHHHH-hccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcE
Confidence 88763 4679999999976 6766553 3447899999999999999999999999999999999999998 58999
Q ss_pred EEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 254 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 254 kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
||+|||+|+.+.+. ..++..+.|.||+|||++.+ .|++++|+||+|||+.||+++++.|.+.++.+.+..|.+.-..
T Consensus 217 KiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGt 296 (419)
T KOG0663|consen 217 KIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGT 296 (419)
T ss_pred EecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCC
Confidence 99999999987654 44677899999999999876 4689999999999999999999999999988888887653222
Q ss_pred CCCCCCC----------------------------CCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 331 FRRKPWP----------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 331 ~~~~~~~----------------------------~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.....|| .+++...+|+..+|..||.+|.||.++|+|+||.+..
T Consensus 297 Pte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 297 PSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred CccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 1111221 1457889999999999999999999999999999853
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=379.47 Aligned_cols=267 Identities=32% Similarity=0.550 Sum_probs=220.8
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+..+|...+.||.|+||.|..+.++.+|..||||++... .......++..+|+.+|+.++ |+||+
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-------------F~~~~~akRtlRElklLr~~~-HeNIi 84 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-------------FENQIDAKRTLRELKLLRHLR-HENII 84 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-------------hhchHHHHHHHHHHHHHHHhc-CCCcc
Confidence 3456777789999999999999999999999999998632 112346678899999999995 99999
Q ss_pred eEEEEEEc-----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 173 KFYNAFED-----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 173 ~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
.+++++.. -+.+|+|+|+| +-+|...+ +.+..++..++..+++||+.||.|+|+.+|+||||||+|+|++
T Consensus 85 ~l~di~~p~~~~~f~DvYiV~elM-etDL~~ii--k~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n-- 159 (359)
T KOG0660|consen 85 GLLDIFRPPSRDKFNDVYLVFELM-ETDLHQII--KSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN-- 159 (359)
T ss_pred eEEeecccccccccceeEEehhHH-hhHHHHHH--HcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec--
Confidence 99999865 45799999999 45776666 3335599999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeccccccCC---CCCccccccCccccchHhhh--cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
.+..+||+|||+|+...+ ....+.++.|.||+|||++. ..|+.++||||+||||.||++|++.|.+.+.-..+.
T Consensus 160 -~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~ 238 (359)
T KOG0660|consen 160 -ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQ 238 (359)
T ss_pred -cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHH
Confidence 588999999999998754 34456789999999999874 467899999999999999999999998876544433
Q ss_pred HHH-----------------------hCCCCCCCCC----CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 323 EVL-----------------------RNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 323 ~i~-----------------------~~~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.|+ ..-+..+..+ +|..++.+.+|+.+||..||.+|+|++++|.||||.....
T Consensus 239 lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd 318 (359)
T KOG0660|consen 239 LILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD 318 (359)
T ss_pred HHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence 332 2222222222 5788999999999999999999999999999999997655
Q ss_pred CCCC
Q 008197 376 ASEI 379 (574)
Q Consensus 376 ~~~~ 379 (574)
....
T Consensus 319 p~dE 322 (359)
T KOG0660|consen 319 PEDE 322 (359)
T ss_pred CccC
Confidence 4443
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-49 Score=387.77 Aligned_cols=258 Identities=33% Similarity=0.557 Sum_probs=214.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|..++.||+|+||.||++.+..+|...|||.+.... ....+.+.+|+.+|.+|. |||||++++
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---------------~~~~~~l~~Ei~iL~~l~-~p~IV~~~G 81 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---------------SPTSESLEREIRILSRLN-HPNIVQYYG 81 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---------------chhHHHHHHHHHHHHhCC-CCCEEeeCC
Confidence 5788999999999999999999999999999886531 111567899999999996 999999999
Q ss_pred EEEcCC--EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDDN--YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
...... .++|.|||+++|+|.+++..... .+++..++.+.+||+.||.|||++|||||||||+|||++. .++.+|
T Consensus 82 ~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~--~~~~~K 158 (313)
T KOG0198|consen 82 SSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP--SNGDVK 158 (313)
T ss_pred ccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC--CCCeEE
Confidence 755544 79999999999999998865544 8999999999999999999999999999999999999993 268999
Q ss_pred EEeeccccccCC----CCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKP----GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~-~~~~~~~~~i~~~ 327 (574)
|+|||++..... ........||+.|||||++.... .+++|||||||++.||+||++||.. .........+...
T Consensus 159 laDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~ 238 (313)
T KOG0198|consen 159 LADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE 238 (313)
T ss_pred eccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc
Confidence 999999987653 12234578999999999998543 3489999999999999999999977 3444444444444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.. .+ ...+.+|+++++||.+||..+|.+||||.++|.|||.+....
T Consensus 239 ~~-~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 239 DS-LP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred CC-CC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 31 12 222468999999999999999999999999999999986543
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-49 Score=380.86 Aligned_cols=264 Identities=28% Similarity=0.479 Sum_probs=230.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++...||.|..++||+|+...++..||||++...+ + ....+.+.+|+..|+.+ +||||+.++
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk-------------c-~~~ld~l~kE~~~msl~-~HPNIv~~~ 90 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK-------------C-NNDLDALRKEVQTMSLI-DHPNIVTYH 90 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh-------------h-hhhHHHHHHHHHHhhhc-CCCCcceEE
Confidence 47999999999999999999999999999999997642 1 13367899999999998 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
..|..+..+|+||.||.+|++++.+...-...+.|..|+.|++++++||.|||.+|.||||||+.||||+ .+|.|||
T Consensus 91 ~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~---~dG~VkL 167 (516)
T KOG0582|consen 91 CSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID---SDGTVKL 167 (516)
T ss_pred EEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc---CCCcEEE
Confidence 9999999999999999999999999777667799999999999999999999999999999999999999 4899999
Q ss_pred EeeccccccCC-CCC----ccccccCccccchHhhh---cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 256 TDFGLSDFIKP-GKK----FQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~----~~~~~gt~~y~aPE~~~---~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+|||.+..+.. +.+ +.+.+||++|||||++. ..|+.|+|||||||+.+||.+|..||....+..++...+++
T Consensus 168 adFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn 247 (516)
T KOG0582|consen 168 ADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN 247 (516)
T ss_pred cCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 99998765432 221 25679999999999964 35799999999999999999999999999888888888887
Q ss_pred CCCCCC------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 328 KPDFRR------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 328 ~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
.+..+. .....++..++.+|..||..||.+||||+++|+|+||+......
T Consensus 248 ~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~ 303 (516)
T KOG0582|consen 248 DPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE 303 (516)
T ss_pred CCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence 764322 22234677899999999999999999999999999999865433
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-50 Score=368.76 Aligned_cols=264 Identities=33% Similarity=0.625 Sum_probs=237.5
Q ss_pred cccceeec-ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+.++|.+. ++||-|-.|+|-.+.++.||+.+|+|++... ...++|+++.-....|||||
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------------------~KARrEVeLHw~~s~h~~iV 118 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------------------PKARREVELHWMASGHPHIV 118 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------------------HHHHhHhhhhhhhcCCCceE
Confidence 55678886 5899999999999999999999999988643 45678988876677899999
Q ss_pred eEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 173 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 173 ~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
.++++|+. ..++.+|||.++||.|++.+..+....|++.++..|+.||..|+.|||+.+|.||||||+|+|+....
T Consensus 119 ~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~ 198 (400)
T KOG0604|consen 119 SIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS 198 (400)
T ss_pred EeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC
Confidence 99999864 56899999999999999999887778899999999999999999999999999999999999999877
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCC----ChhHHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKE 323 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~----~~~~~~~~ 323 (574)
.+..+||+|||+|+.........+.|-||+|.|||++.. +|...+|+||+||++|-|++|.+||+.. .......+
T Consensus 199 ~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~r 278 (400)
T KOG0604|consen 199 PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRR 278 (400)
T ss_pred CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhH
Confidence 888999999999998776677788899999999999975 5778899999999999999999999764 34567888
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
|..+...|+.+.|..+|++++++|+.+|..+|.+|.|+.+++.|||+.....-.
T Consensus 279 I~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp 332 (400)
T KOG0604|consen 279 IRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVP 332 (400)
T ss_pred hhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCC
Confidence 999999999999999999999999999999999999999999999998765433
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=388.69 Aligned_cols=266 Identities=32% Similarity=0.636 Sum_probs=242.0
Q ss_pred cccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
++..+..-|.+.+.||+|.|+.|-+|++..||..||||++.+.++ .......+..|++.|+.++ ||
T Consensus 12 ~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl-------------D~~st~hlfqEVRCMKLVQ-Hp 77 (864)
T KOG4717|consen 12 YDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL-------------DTLSTGHLFQEVRCMKLVQ-HP 77 (864)
T ss_pred cccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc-------------chhhhhHHHHHHHHHHHhc-Cc
Confidence 345566789999999999999999999999999999999998643 2345678999999999995 99
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
|||++|++..+...+|||+|+-.+|+|+++|.+.. ..+.+..++.|+.||+.|+.|||...+|||||||+|+.+.. .
T Consensus 78 NiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE--K 154 (864)
T KOG4717|consen 78 NIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE--K 154 (864)
T ss_pred CeeeeeehhcccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee--e
Confidence 99999999999999999999999999999998654 56899999999999999999999999999999999999974 6
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-C-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
-|.|||+|||++-.+.++....+.||+..|.|||++.+. | .+++||||||||||.|++|++||...+..+.+..|+..
T Consensus 155 lGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC 234 (864)
T KOG4717|consen 155 LGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC 234 (864)
T ss_pred cCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc
Confidence 799999999999999999999999999999999998775 4 68899999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
+...+ ..+|.++++||.+||..||++|.|.++|..|+|++.....
T Consensus 235 KYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 235 KYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred cccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 76554 4689999999999999999999999999999999977643
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=382.65 Aligned_cols=260 Identities=27% Similarity=0.432 Sum_probs=216.8
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||+|+||.||+|.+..+|+.||||.+.+.... .......+.+|+.+++.+ +||||+.++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~~~E~~il~~l-~~~~iv~~~~~ 68 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK------------KRKGEAMALNEKRILEKV-NSRFVVSLAYA 68 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh------------hhhhHHHHHHHHHHHHhc-CCCcEEEEEEE
Confidence 78899999999999999999999999999998764211 011234577899999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+.+.+.+++||||+++|+|.+.+.......+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|
T Consensus 69 ~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~D 145 (285)
T cd05631 69 YETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISD 145 (285)
T ss_pred EccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEee
Confidence 99999999999999999998877655455799999999999999999999999999999999999998 478899999
Q ss_pred eccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008197 258 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336 (574)
Q Consensus 258 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 336 (574)
||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+............
T Consensus 146 fg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T cd05631 146 LGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYS 225 (285)
T ss_pred CCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCC
Confidence 999987655444456689999999998865 5688999999999999999999999876554333333222111122223
Q ss_pred CCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 337 PSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 337 ~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
..+++++.+||.+||+.||.+||+ ++++++||||...
T Consensus 226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 468899999999999999999997 8999999999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-48 Score=384.76 Aligned_cols=253 Identities=28% Similarity=0.530 Sum_probs=220.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|.+..+|+.||||++..... ......+.+.+|+.+++.+ +||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~ 68 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV------------IRLKQEQHVHNEKRVLKEV-SHPFIIRLFW 68 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH------------hhhHHHHHHHHHHHHHHhC-CCCcHhhhHh
Confidence 68999999999999999999999999999999865411 0112345688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~ 143 (291)
T cd05612 69 TEHDQRFLYMLMEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLT 143 (291)
T ss_pred hhccCCeEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEE
Confidence 99999999999999999999998843 46799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+..+...++
T Consensus 144 Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~--- 218 (291)
T cd05612 144 DFGFAKKLRDR--TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFP--- 218 (291)
T ss_pred ecCcchhccCC--cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCC---
Confidence 99999866432 2346899999999998754 58899999999999999999999999888888888887765443
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 336 WPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 336 ~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
..+++.+.+||++||+.||.+||+ +.++++||||+..
T Consensus 219 -~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 219 -RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred -ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 346889999999999999999995 9999999999753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=389.95 Aligned_cols=254 Identities=31% Similarity=0.567 Sum_probs=221.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|.+.+.||+|+||.||+|+++.+|+.||||++.+... ......+.+.+|+.+++.+ +||||++++
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~iv~~~ 84 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI------------LKMKQVQHVAQEKSILMEL-SHPFIVNMM 84 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH------------hhhhhHHHHHHHHHHHHhC-CCCCCCcEE
Confidence 469999999999999999999999999999999876421 1112346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+||||++||+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 85 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl 159 (329)
T PTZ00263 85 CSFQDENRVYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKV 159 (329)
T ss_pred EEEEcCCEEEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEE
Confidence 999999999999999999999998843 46789999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+..+...++
T Consensus 160 ~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p-- 235 (329)
T PTZ00263 160 TDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP-- 235 (329)
T ss_pred eeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC--
Confidence 999999866432 2346899999999998754 58899999999999999999999998888788888877654433
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
..++..+.+||.+||+.||.+||+ +.+++.||||+..
T Consensus 236 --~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 236 --NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred --CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 247889999999999999999997 7999999999863
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-47 Score=393.51 Aligned_cols=258 Identities=27% Similarity=0.466 Sum_probs=218.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||+||+|.+..+++.||||++.+... ........+..|+.++..+ +||||+++++
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~E~~il~~~-~~~~iv~~~~ 68 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM------------LEKEQVGHIRAERDILVEA-DSLWVVKMFY 68 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH------------HHhhHHHHHHHHHHHHHhC-CCCCcceEEE
Confidence 68999999999999999999999999999999976421 1122345788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+.+...+|+|||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~ 143 (363)
T cd05628 69 SFQDKLNLYLIMEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLS 143 (363)
T ss_pred EEecCCeEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEe
Confidence 99999999999999999999998853 46799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC------------------------------------CccccccCccccchHhhhc-CCCCCcchHhHH
Q 008197 257 DFGLSDFIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 299 (574)
Q Consensus 257 DFG~a~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG 299 (574)
|||++....... .....+||+.|+|||++.+ .++.++||||||
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 999987543210 0124589999999999865 468899999999
Q ss_pred HHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCC---CCCCHHHHhcCcccccc
Q 008197 300 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR---ARLTAAQALSHPWVREG 373 (574)
Q Consensus 300 ~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~---~Rps~~~~l~hp~~~~~ 373 (574)
|++|||++|+.||.+.+..+.+..+.........+....+++++++||.+|+. +|. .||++.++++||||+..
T Consensus 224 vil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 224 VIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 99999999999999888888888887654443333344588999999999775 444 46899999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=388.19 Aligned_cols=250 Identities=31% Similarity=0.543 Sum_probs=215.9
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.++.+|+.||||++.+... ........+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~ 67 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI------------IAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTH 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcC
Confidence 369999999999999999999999999876421 1122345678899999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a 142 (323)
T cd05571 68 DRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLC 142 (323)
T ss_pred CEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCC
Confidence 99999999999999998874 346789999999999999999999999999999999999998 4788999999998
Q ss_pred cccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++ ..+
T Consensus 143 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~ 218 (323)
T cd05571 143 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTL 218 (323)
T ss_pred cccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence 7532 2233445689999999999865 468899999999999999999999998887777777776654443 457
Q ss_pred CHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
++++.+||.+||..||++|| ++.++++||||+..
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 219 SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 89999999999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-47 Score=392.67 Aligned_cols=258 Identities=30% Similarity=0.548 Sum_probs=219.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|++..+|+.||||++.+... ........+.+|+.+|+.+ +||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~E~~il~~l-~h~~iv~~~~ 68 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM------------LEKEQVAHVRAERDILAEA-DNPWVVKLYY 68 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhC-CCCCCcceEE
Confidence 69999999999999999999999999999999976421 1122345678999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+|.+++.+|||||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~ 143 (364)
T cd05599 69 SFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD---AKGHIKLS 143 (364)
T ss_pred EEEcCCeEEEEECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEe
Confidence 99999999999999999999998854 35799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC---------------------------------------CccccccCccccchHhhhc-CCCCCcchH
Q 008197 257 DFGLSDFIKPGK---------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVW 296 (574)
Q Consensus 257 DFG~a~~~~~~~---------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~Dvw 296 (574)
|||++..+.... .....+||+.|+|||++.+ .++.++|||
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 999986542111 0113479999999998865 468899999
Q ss_pred hHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHHHhcCcccccc
Q 008197 297 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 373 (574)
Q Consensus 297 SlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~~l~hp~~~~~ 373 (574)
||||++|+|++|..||.+.+.......++.....+..+....+++++.+||.+||. +|.+|++ +.+++.||||+..
T Consensus 224 SlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 224 SLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred cchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 99999999999999999888877777777655444433334678999999999997 8999998 9999999999864
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=370.77 Aligned_cols=258 Identities=30% Similarity=0.528 Sum_probs=218.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
-.|.-.+++|+|+||.||+|....++..||||++..++. .-.+|+.||+.+ +|||||++.
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------------------~knrEl~im~~l-~HpNIV~L~ 83 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------------------YKNRELQIMRKL-DHPNIVRLL 83 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------------------cCcHHHHHHHhc-CCcCeeeEE
Confidence 368889999999999999999999999999998865421 124899999988 699999999
Q ss_pred EEEEc--CC---EEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 176 NAFED--DN---YVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 176 ~~~~~--~~---~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
-+|.. ++ ++.+||||++. +|.+.+.. ..+.+++...++.+++||++||.|||+.||+||||||+|+|+|.
T Consensus 84 ~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-- 160 (364)
T KOG0658|consen 84 YFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-- 160 (364)
T ss_pred EEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC--
Confidence 88863 22 56799999975 88887743 23577999999999999999999999999999999999999996
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
+.+.+||||||.|+.+..+.....+..|..|+|||++.+ .|+.+.||||.|||+.||+-|++.|.+.+....+..|++
T Consensus 161 ~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik 240 (364)
T KOG0658|consen 161 DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIK 240 (364)
T ss_pred CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence 679999999999999887777788899999999998865 579999999999999999999999999887777666654
Q ss_pred C------------C--------CCCCCCCC-----CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 327 N------------K--------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 327 ~------------~--------~~~~~~~~-----~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
. . +.+....| ..+++++.+|+.++|..+|.+|.++.+++.||||.+....
T Consensus 241 ~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 241 VLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred HhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 2 1 11111222 3578999999999999999999999999999999986554
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-47 Score=386.24 Aligned_cols=257 Identities=32% Similarity=0.526 Sum_probs=220.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|++..+|+.||||++.+... ........+.+|+.++..+ +||||+++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~ 68 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL------------FKLNEVRHVLTERDILTTT-KSEWLVKLLY 68 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH------------hhhhHHHHHHHHHHHHHhC-CCCCCccEEE
Confidence 69999999999999999999999999999999976421 0112345688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+.+||||||++||+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~ 143 (333)
T cd05600 69 AFQDDEYLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLT 143 (333)
T ss_pred EEEcCCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEE
Confidence 9999999999999999999999884 346789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+.+..+.........+.
T Consensus 144 Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 221 (333)
T cd05600 144 DFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPV 221 (333)
T ss_pred eCcCCccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCC
Confidence 9999976543 3345689999999999865 468899999999999999999999988887777777665433332222
Q ss_pred C----CCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 336 W----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 336 ~----~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+ ..+++++.+||.+||..+|.+||++.++++||||+..
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 2 2568999999999999999999999999999999863
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-47 Score=390.99 Aligned_cols=259 Identities=29% Similarity=0.480 Sum_probs=222.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|++..++..||||++.+... ......+.+..|+.+++.+ +||||++++
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~il~~~-~h~~iv~~~ 109 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM------------IKRSDSAFFWEERDIMAHA-NSEWIVQLH 109 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhhhHHHHHHHHHHHHhC-CCCCcceEE
Confidence 479999999999999999999999999999999875421 1112334577899999999 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~~kL 183 (370)
T cd05596 110 YAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKL 183 (370)
T ss_pred EEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCCEEE
Confidence 999999999999999999999987732 4589999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhc-----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 184 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~ 263 (370)
T cd05596 184 ADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHK 263 (370)
T ss_pred EeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC
Confidence 9999997654322 2235689999999999854 25789999999999999999999999988888888888765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
.....+....+|.++.+||.+||+.+|.+ |+|+.++++||||+..
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 264 NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 44444444568999999999999999988 9999999999999863
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-49 Score=382.84 Aligned_cols=256 Identities=29% Similarity=0.498 Sum_probs=223.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|...+.||+|+||.||+|.+..+++.||||++.... .....+.++.|+.+|.++ ++|||.++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--------------~~deIediqqei~~Ls~~-~~~~it~yy 77 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--------------AEDEIEDIQQEISVLSQC-DSPNITEYY 77 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--------------cchhhHHHHHHHHHHHhc-CcchHHhhh
Confidence 46888899999999999999999999999999997652 234567899999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+.|..+..++++||||.||++.+.+ +.+..+.+..+..++++++.||.|||.++.+|||||+.|||+. ..+.|||
T Consensus 78 gsyl~g~~LwiiMey~~gGsv~~lL--~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl 152 (467)
T KOG0201|consen 78 GSYLKGTKLWIIMEYCGGGSVLDLL--KSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKL 152 (467)
T ss_pred hheeecccHHHHHHHhcCcchhhhh--ccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEE
Confidence 9999999999999999999999987 4455669999999999999999999999999999999999998 4699999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||.+........ ..+++|||.|||||++.+ .|+.++||||||++.+||++|.+|+....+..++..|-+..++..
T Consensus 153 ~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L- 231 (467)
T KOG0201|consen 153 ADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL- 231 (467)
T ss_pred EecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc-
Confidence 99999987765433 378899999999999986 679999999999999999999999988777555555544332221
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
-..+|+.+++||..||..||+.||||.++|+|+|++...
T Consensus 232 --~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 232 --DGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred --ccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 136789999999999999999999999999999999843
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-47 Score=362.23 Aligned_cols=262 Identities=30% Similarity=0.473 Sum_probs=218.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC-cceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn-iv~~ 174 (574)
..|..+++||+|+||+||+|+++.+|+.||+|+++..... +.......+|+.+|+.|. |+| ||.+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-------------EG~P~taiREisllk~L~-~~~~iv~L 76 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-------------EGVPSTAIREISLLKRLS-HANHIVRL 76 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-------------cCCCchhhHHHHHHHHhC-CCcceEEE
Confidence 3588888999999999999999999999999999765210 112345689999999995 999 9999
Q ss_pred EEEEEcCC------EEEEEEeccCCCchHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 175 YNAFEDDN------YVYIAMELCEGGELLDRILAKKD--SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 175 ~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
++++.+.+ .+++|+||+. -+|..++..... ..++...++.+++||+.||.|||+++|+||||||+|||++.
T Consensus 77 ~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 77 HDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 99998877 8999999995 488877754332 36888999999999999999999999999999999999994
Q ss_pred CCCCCCeEEEeeccccccC-CCCCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
.+.+||+|||+|+... +...+...++|.+|+|||++.+. |++..||||+|||++||+++++.|.+.++.+.+..
T Consensus 156 ---~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~ 232 (323)
T KOG0594|consen 156 ---SGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR 232 (323)
T ss_pred ---CCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 8999999999998665 45557788999999999998764 68899999999999999999999999988777777
Q ss_pred HHhCCCCCCCCCC--------------------------CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 324 VLRNKPDFRRKPW--------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 324 i~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
|..--.......| +..+++..+++.+||+.+|.+|.||..+|.||||.+...
T Consensus 233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 7543211111112 223457899999999999999999999999999998643
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-47 Score=386.29 Aligned_cols=254 Identities=31% Similarity=0.559 Sum_probs=219.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCC-CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
+.|.+.+.||+|+||.||+|.++.++ ..||+|.+.+... ......+.+.+|+.+++.+ +||||+++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~Iv~~ 96 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI------------IKQKQVDHVFSERKILNYI-NHPFCVNL 96 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh------------hhhhhHHHHHHHHHHHHhC-CCCCCcce
Confidence 46999999999999999999876655 6899999875421 1122345688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+++.+|+||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 97 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ik 171 (340)
T PTZ00426 97 YGSFKDESYLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDGFIK 171 (340)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEE
Confidence 9999999999999999999999998843 45799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
|+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+..+...++
T Consensus 172 L~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p- 248 (340)
T PTZ00426 172 MTDFGFAKVVDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP- 248 (340)
T ss_pred EecCCCCeecCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC-
Confidence 9999999876432 2456899999999998654 58899999999999999999999998888778888877654433
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.+++.+.++|++||+.||.+|+ +++++++||||+..
T Consensus 249 ---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 249 ---KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred ---CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 35788999999999999999995 89999999999864
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=390.46 Aligned_cols=259 Identities=30% Similarity=0.463 Sum_probs=216.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.+++.||+|+||+||+|++..+++.||||++.+... ......+.+.+|+.+++.+ +||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~------------~~~~~~~~~~~E~~il~~l-~h~~iv~l~~ 68 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV------------LNRNQVAHVKAERDILAEA-DNEWVVKLYY 68 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhHHHHHHHHHHHHHHhc-CCCCeeeeEE
Confidence 58999999999999999999999999999999976421 1123456788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+|||||+||+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~ 143 (381)
T cd05626 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLT 143 (381)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEe
Confidence 99999999999999999999998743 45789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC------------------------------------------------CccccccCccccchHhhhc-
Q 008197 257 DFGLSDFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVLKR- 287 (574)
Q Consensus 257 DFG~a~~~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~~~- 287 (574)
|||++....... .....+||+.|+|||++.+
T Consensus 144 DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (381)
T cd05626 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK 223 (381)
T ss_pred eCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC
Confidence 999975321000 0123579999999998865
Q ss_pred CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccc--cCCCCCCCHHHHh
Q 008197 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV--KDPRARLTAAQAL 365 (574)
Q Consensus 288 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~--~dp~~Rps~~~~l 365 (574)
.++.++|||||||++|||++|+.||...+.......+.........+.+..+++++.+||.+|+. .+|..||++.+++
T Consensus 224 ~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 224 GYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred CCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 46889999999999999999999998887766666666544334444445689999999999654 4555699999999
Q ss_pred cCcccccc
Q 008197 366 SHPWVREG 373 (574)
Q Consensus 366 ~hp~~~~~ 373 (574)
.||||+..
T Consensus 304 ~hp~f~~~ 311 (381)
T cd05626 304 AHPFFSEV 311 (381)
T ss_pred cCcccCCC
Confidence 99999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=391.94 Aligned_cols=258 Identities=31% Similarity=0.504 Sum_probs=219.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+++.||+|+||.||+|++..+++.||||++.+... ........+.+|+.+++.+ +||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~------------~~~~~~~~~~~E~~il~~~-~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV------------LLRNQVAHVKAERDILAEA-DNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh------------hhHHHHHHHHHHHHHHHhC-CCCcCCeEEE
Confidence 58999999999999999999999999999999876421 1123456788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+.+++.+|+|||||+||+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~kL~ 143 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLT 143 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEe
Confidence 99999999999999999999998743 35789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCC------------------------------------------------CCccccccCccccchHhhhc-
Q 008197 257 DFGLSDFIKPG------------------------------------------------KKFQDIVGSAYYVAPEVLKR- 287 (574)
Q Consensus 257 DFG~a~~~~~~------------------------------------------------~~~~~~~gt~~y~aPE~~~~- 287 (574)
|||+|...... ......+||+.|+|||++.+
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 223 (382)
T cd05625 144 DFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT 223 (382)
T ss_pred ECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC
Confidence 99997532100 00123579999999998865
Q ss_pred CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHHH
Q 008197 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQA 364 (574)
Q Consensus 288 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~~ 364 (574)
.++.++|||||||++|||++|++||.+.+..+....+.........+....+++++.++|.+|+ .+|.+|++ +.++
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 224 GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI 302 (382)
T ss_pred CCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence 5688999999999999999999999988877777777765555555555678999999999986 59999997 9999
Q ss_pred hcCcccccc
Q 008197 365 LSHPWVREG 373 (574)
Q Consensus 365 l~hp~~~~~ 373 (574)
++||||+..
T Consensus 303 ~~hp~f~~~ 311 (382)
T cd05625 303 KAHPFFKTI 311 (382)
T ss_pred hcCCCcCCc
Confidence 999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-47 Score=388.83 Aligned_cols=264 Identities=30% Similarity=0.434 Sum_probs=222.5
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC--
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH-- 168 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h-- 168 (574)
.+.+.-+|.|.+.||+|+||+|-+|.+..|++.||||+++..+ ....+...|+.||..|..|
T Consensus 181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----------------~f~~Q~~~Ei~iL~~ln~~d~ 244 (586)
T KOG0667|consen 181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----------------RFLRQAQIEIRILELLNKHDP 244 (586)
T ss_pred cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----------------HHHHHHHHHHHHHHHHhccCC
Confidence 3455668999999999999999999999999999999998763 2445677899999999623
Q ss_pred ---CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 169 ---ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 169 ---pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
-|||+++++|...+++|||+|++ +-+|++++..++...++...++.++.||+.||.+||+.+|||+||||+||||.
T Consensus 245 ~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~ 323 (586)
T KOG0667|consen 245 DDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLK 323 (586)
T ss_pred CCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeec
Confidence 47999999999999999999999 56999999988889999999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
... ...|||+|||+|++..... .+.+.+..|+|||++.| +|+.++||||||||++||++|.+.|.+.++.+.+..|
T Consensus 324 ~~~-r~~vKVIDFGSSc~~~q~v--ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I 400 (586)
T KOG0667|consen 324 DPK-RSRIKVIDFGSSCFESQRV--YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARI 400 (586)
T ss_pred cCC-cCceeEEecccccccCCcc--eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHH
Confidence 654 4599999999998865333 37899999999998766 6799999999999999999999999998888777666
Q ss_pred HhCCCC---------------CCC--------------------------------CCCC------------CCCHHHHH
Q 008197 325 LRNKPD---------------FRR--------------------------------KPWP------------SISNSAKD 345 (574)
Q Consensus 325 ~~~~~~---------------~~~--------------------------------~~~~------------~~~~~~~~ 345 (574)
+.-... |.. ...| .-...+.+
T Consensus 401 ~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d 480 (586)
T KOG0667|consen 401 IEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID 480 (586)
T ss_pred HHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence 431000 000 0001 01234789
Q ss_pred HHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 346 FVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 346 li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
||++||..||.+|+|+.++|+||||+...
T Consensus 481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 481 FLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred HHHHHhccCchhcCCHHHHhcCccccccc
Confidence 99999999999999999999999999543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=378.85 Aligned_cols=249 Identities=27% Similarity=0.402 Sum_probs=210.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCE-EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~-vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
...+.+.||.|+||+||+|.++ |.. ||||++...... ....+.+.+|+.+|.+| +|||||+++
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~-------------~~~~~~f~~E~~il~~l-~HpNIV~f~ 105 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFD-------------DESRKAFRREASLLSRL-RHPNIVQFY 105 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcC-------------hHHHHHHHHHHHHHHhC-CCCCeeeEE
Confidence 3455667999999999999754 556 999999765211 11267899999999999 599999999
Q ss_pred EEEEcCC-EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CEeecCCCCcEEEccCCCCC-C
Q 008197 176 NAFEDDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFLFKSAKEDS-S 252 (574)
Q Consensus 176 ~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~-~ 252 (574)
+++..+. .++|||||+++|+|.+++.......++...+..++.||+.|++|||+++ ||||||||+|||++. ++ +
T Consensus 106 G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~---~~~~ 182 (362)
T KOG0192|consen 106 GACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL---KGKT 182 (362)
T ss_pred EEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC---CCCE
Confidence 9999887 7999999999999999887655678999999999999999999999999 999999999999994 65 9
Q ss_pred eEEEeeccccccCCC-CCccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||+++..... .......||+.|||||++.+. ++.++|||||||++|||+||+.||.+.....+...+..+.
T Consensus 183 ~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~ 262 (362)
T KOG0192|consen 183 LKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGG 262 (362)
T ss_pred EEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC
Confidence 999999999876543 333447999999999999854 7999999999999999999999999888766666666544
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+ ...++.+..|+.+||..||.+||+..+++.
T Consensus 263 ~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 263 LRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 332221 237889999999999999999999988754
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=380.28 Aligned_cols=248 Identities=26% Similarity=0.492 Sum_probs=214.4
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||+|+||.||+|++..+++.||||++.+... ........+.+|+.+++++ +||||+++++++...+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~------------~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 67 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI------------VSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEK 67 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCe
Confidence 7999999999999999999999999875421 1122345678899999999 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
+|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 68 ~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~~~~ 142 (312)
T cd05585 68 LYLVLAFINGGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD---YQGHIALCDFGLCKL 142 (312)
T ss_pred EEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC---CCCcEEEEECccccc
Confidence 9999999999999998843 46799999999999999999999999999999999999998 478999999999975
Q ss_pred cCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCH
Q 008197 264 IKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341 (574)
Q Consensus 264 ~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 341 (574)
... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+......++ ..+++
T Consensus 143 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~ 218 (312)
T cd05585 143 NMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDR 218 (312)
T ss_pred CccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCH
Confidence 432 2333456899999999988654 68899999999999999999999998888888888877654433 45789
Q ss_pred HHHHHHHHccccCCCCCC---CHHHHhcCcccccc
Q 008197 342 SAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 373 (574)
Q Consensus 342 ~~~~li~~~L~~dp~~Rp---s~~~~l~hp~~~~~ 373 (574)
++.+||.+||..||.+|| ++.+++.||||+..
T Consensus 219 ~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 219 DAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 999999999999999997 58999999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=388.41 Aligned_cols=259 Identities=28% Similarity=0.483 Sum_probs=220.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|++..+++.||+|++.+... ........+..|+.+++.+ +||||++++
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~i~~~~-~hp~iv~~~ 109 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM------------IKRSDSAFFWEERDIMAFA-NSPWVVQLF 109 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhhHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 579999999999999999999999999999999875421 1112344577899999998 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~~kL 183 (370)
T cd05621 110 CAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKL 183 (370)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEE
Confidence 999999999999999999999997732 3589999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhcC-----CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||+|....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 184 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (370)
T cd05621 184 ADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 263 (370)
T ss_pred EecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 9999998764332 22456899999999998643 5789999999999999999999999888888888887755
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
..+..+....++..++++|.+||..+|.+ |+|+.++++||||+..
T Consensus 264 ~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 264 NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 44444444467899999999999865544 8999999999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=390.54 Aligned_cols=257 Identities=27% Similarity=0.496 Sum_probs=215.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+++.||.|+||.||+|.+..+|+.||||++.+... ......+.+.+|+.+++.+ +||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~E~~il~~l-~hp~iv~~~~ 68 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM------------FKKDQLAHVKAERDVLAES-DSPWVVSLYY 68 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH------------HHhHHHHHHHHHHHHHHhC-CCCCcceEEE
Confidence 68999999999999999999999999999999865421 1122346788999999999 6999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+||||++||+|.+++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~ 143 (377)
T cd05629 69 SFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLS 143 (377)
T ss_pred EEEcCCeeEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEe
Confidence 99999999999999999999998843 46789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC------------------------------------------------CccccccCccccchHhhhc-
Q 008197 257 DFGLSDFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVLKR- 287 (574)
Q Consensus 257 DFG~a~~~~~~~------------------------------------------------~~~~~~gt~~y~aPE~~~~- 287 (574)
|||+|+...... .....+||+.|+|||++.+
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 999986321100 0012479999999998865
Q ss_pred CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCC---CCHHHH
Q 008197 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTAAQA 364 (574)
Q Consensus 288 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R---ps~~~~ 364 (574)
.++.++|||||||++|||++|.+||.+......+..+.........+....++.++.+||.+||. +|.+| +|+.++
T Consensus 224 ~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~ 302 (377)
T cd05629 224 GYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEI 302 (377)
T ss_pred CCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHH
Confidence 46889999999999999999999998888777777776543333333334578999999999998 66665 599999
Q ss_pred hcCccccc
Q 008197 365 LSHPWVRE 372 (574)
Q Consensus 365 l~hp~~~~ 372 (574)
+.||||+.
T Consensus 303 l~hp~~~~ 310 (377)
T cd05629 303 KSHPFFRG 310 (377)
T ss_pred hcCCCcCC
Confidence 99999985
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-46 Score=390.45 Aligned_cols=258 Identities=28% Similarity=0.469 Sum_probs=218.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++++.||+|+||.||+|++..+|+.||||++.+... ........+.+|+.+|+.+ +||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~------------~~~~~~~~~~~E~~il~~l-~h~~iv~~~~ 68 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV------------LMRNQAAHVKAERDILAEA-DNEWVVKLYY 68 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH------------HhhhhHHHHHHHHHHHHhC-CCCCcceEEE
Confidence 59999999999999999999999999999999876421 1112345688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+.+++.+|+|||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~ 143 (376)
T cd05598 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLT 143 (376)
T ss_pred EEEcCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEE
Confidence 99999999999999999999998843 45789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCC--------------------------------------------CCccccccCccccchHhhhcC-CCC
Q 008197 257 DFGLSDFIKPG--------------------------------------------KKFQDIVGSAYYVAPEVLKRK-SGP 291 (574)
Q Consensus 257 DFG~a~~~~~~--------------------------------------------~~~~~~~gt~~y~aPE~~~~~-~~~ 291 (574)
|||+|...... ......+||+.|+|||++.+. ++.
T Consensus 144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 223 (376)
T cd05598 144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223 (376)
T ss_pred eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence 99997432100 001235799999999998654 588
Q ss_pred CcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCC---CHHHHhcCc
Q 008197 292 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHP 368 (574)
Q Consensus 292 ~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~~~l~hp 368 (574)
++|||||||++|+|++|+.||.+....+....+.........+.+..+++++.++|.+|+ .+|.+|+ ++.++++||
T Consensus 224 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~ 302 (376)
T cd05598 224 LCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHP 302 (376)
T ss_pred ceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCC
Confidence 999999999999999999999988877777766655444444445678999999999977 5999999 999999999
Q ss_pred ccccc
Q 008197 369 WVREG 373 (574)
Q Consensus 369 ~~~~~ 373 (574)
||+..
T Consensus 303 ~~~~~ 307 (376)
T cd05598 303 FFKGI 307 (376)
T ss_pred CcCCC
Confidence 99863
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-47 Score=357.74 Aligned_cols=267 Identities=36% Similarity=0.619 Sum_probs=234.4
Q ss_pred cccceeec-ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
|.+-|++. +.||+|+|+.|-.+....+|..||||++.+.. .....++.+|++++.+.++|+||+
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---------------gHsR~RvfREVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---------------GHSRSRVFREVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---------------chHHHHHHHHHHHHHHhcCCccHH
Confidence 45567764 68999999999999999999999999998753 346678999999999999999999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++|+++..+|||||-+.||+|+.+|.+ ...|++.++..++..|+.||.|||.+||.||||||+|||....+.-.-
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~~--~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQK--RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHHH--hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999999999999954 467999999999999999999999999999999999999997777778
Q ss_pred eEEEeeccccccCC--------CCCccccccCccccchHhhh---c---CCCCCcchHhHHHHHHHHHhCCCCCCCCC--
Q 008197 253 LKATDFGLSDFIKP--------GKKFQDIVGSAYYVAPEVLK---R---KSGPESDVWSIGVITYILLCGRRPFWDKT-- 316 (574)
Q Consensus 253 vkl~DFG~a~~~~~--------~~~~~~~~gt~~y~aPE~~~---~---~~~~~~DvwSlG~il~elltg~~Pf~~~~-- 316 (574)
||||||.+..-+.. .....+.+|+..|||||+.. + .|..++|.||||||||-||+|.+||.+.-
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~ 297 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA 297 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence 99999998764432 12334679999999999863 2 35788999999999999999999996532
Q ss_pred -------------hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 317 -------------EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 317 -------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
...++..|..+...|+...|..+|.+++++|..+|..++.+|.++.++++|||++......
T Consensus 298 dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ek 371 (463)
T KOG0607|consen 298 DCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEK 371 (463)
T ss_pred cCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhc
Confidence 2357888999999999999999999999999999999999999999999999998765443
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-46 Score=379.76 Aligned_cols=251 Identities=31% Similarity=0.557 Sum_probs=215.2
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|+++.+++.||||++.+... ......+.+..|..++..+.+||||+++++++...
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 68 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI------------LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP 68 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH------------hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC
Confidence 369999999999999999999999999876421 11123456778999988876799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~iv~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~ 143 (320)
T cd05590 69 DRLFFVMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMC 143 (320)
T ss_pred CEEEEEEcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCC
Confidence 99999999999999998774 346799999999999999999999999999999999999998 4789999999998
Q ss_pred cccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+...++..+......++ +.+
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~ 219 (320)
T cd05590 144 KEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWL 219 (320)
T ss_pred eecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCC
Confidence 7532 2233345689999999999875 458899999999999999999999999888888888877654332 347
Q ss_pred CHHHHHHHHHccccCCCCCCCH------HHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~------~~~l~hp~~~~~ 373 (574)
++++.+||.+||+.||.+||++ ++++.||||+..
T Consensus 220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 220 SQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 8999999999999999999998 999999999863
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=386.65 Aligned_cols=259 Identities=32% Similarity=0.605 Sum_probs=222.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||.||+|++..+|+.||||++.+... ........+..|+.++..+ +||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM------------IKRNQIAHVRAERDILADA-DSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH------------hhccHHHHHHHHHHHHHhc-CCCCccchh
Confidence 369999999999999999999999999999999976421 1112345688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL 142 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKL 142 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEe
Confidence 9999999999999999999999988543 6799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC------------------------------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHH
Q 008197 256 TDFGLSDFIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYI 304 (574)
Q Consensus 256 ~DFG~a~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~e 304 (574)
+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 143 ADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred ecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 9999997654332 22346799999999998754 6889999999999999
Q ss_pred HHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-HHHHhcCcccccc
Q 008197 305 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 373 (574)
Q Consensus 305 lltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-~~~~l~hp~~~~~ 373 (574)
|++|+.||........+..+.........+..+.+++++.+||.+||. +|.+||+ +.++++||||+..
T Consensus 223 ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 223 MLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 999999999888777777777643334444445579999999999998 9999999 9999999999863
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=380.14 Aligned_cols=250 Identities=30% Similarity=0.534 Sum_probs=214.2
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||++.+..+|+.||||++.+... ........+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~ 67 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI------------IAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTK 67 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcC
Confidence 368999999999999999999999999976421 1122345678899999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 68 ~~~~lv~Ey~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~ 142 (328)
T cd05593 68 DRLCFVMEYVNGGELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLC 142 (328)
T ss_pred CEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCC
Confidence 999999999999999887743 45799999999999999999999999999999999999998 4789999999998
Q ss_pred cccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++ ..+
T Consensus 143 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~ 218 (328)
T cd05593 143 KEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTL 218 (328)
T ss_pred ccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCC
Confidence 75322 223345689999999999865 468899999999999999999999988887777777765544433 457
Q ss_pred CHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
++++.+||.+||..||.+|| ++.++++||||...
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 219 SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 89999999999999999997 89999999999763
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=374.01 Aligned_cols=255 Identities=25% Similarity=0.416 Sum_probs=210.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||.|+||.||+|++..+++.||+|++..... ......+.+|+.+++.+ +||||++++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~niv~~~ 69 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--------------EGAPCTAIREVSLLKNL-KHANIVTLH 69 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--------------CCcchhHHHHHHHHHhC-CCCCEeeEE
Confidence 369999999999999999999999999999999865311 11234567899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+..++||||+++ +|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl 144 (288)
T cd07871 70 DIIHTERCLTLVFEYLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKL 144 (288)
T ss_pred EEEcCCCeEEEEEeCCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEE
Confidence 999999999999999975 88887743 334689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||++...... .......||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+..+.+..+........
T Consensus 145 ~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 224 (288)
T cd07871 145 ADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPT 224 (288)
T ss_pred CcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999764322 22345678999999998864 468899999999999999999999988776665555433211100
Q ss_pred C--------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 333 R--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 333 ~--------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
. ...+.+++++.+||.+||+.||.+|||+.++|+||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 225 EETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0 0123567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=379.00 Aligned_cols=250 Identities=32% Similarity=0.546 Sum_probs=214.7
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|++..+|..||+|++.+... ........+.+|+.+++.+ +||||++++++|...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~ 67 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI------------IAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTH 67 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecC
Confidence 469999999999999999999999999976421 1122345677899999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||+++|+|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 68 ~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~ 142 (323)
T cd05595 68 DRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLC 142 (323)
T ss_pred CEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHh
Confidence 99999999999999988774 345789999999999999999999999999999999999998 4789999999998
Q ss_pred cccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+.......+......++ ..+
T Consensus 143 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~ 218 (323)
T cd05595 143 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTL 218 (323)
T ss_pred ccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCC
Confidence 7532 2233345689999999998864 468899999999999999999999998888777777776554433 357
Q ss_pred CHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
++++.+||.+||..||.+|| ++.++++||||...
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 219 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 89999999999999999998 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-46 Score=377.51 Aligned_cols=256 Identities=27% Similarity=0.465 Sum_probs=218.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|.+..+++.||||++.+... ......+.+..|+.++..+.+|++|+.+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~------------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~ 68 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI------------IQDDDVECTMVEKRVLALPGKPPFLTQLHS 68 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhcCCCCceeeeEE
Confidence 48899999999999999999999999999999976421 112234567889999999965567899999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+.+|+||||++||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~ 143 (324)
T cd05587 69 CFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIA 143 (324)
T ss_pred EEEcCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEe
Confidence 9999999999999999999998874 346789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccC-CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+......++
T Consensus 144 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~-- 221 (324)
T cd05587 144 DFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP-- 221 (324)
T ss_pred ecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 999987532 22333456899999999998764 58899999999999999999999998888888888876654433
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCH-----HHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~-----~~~l~hp~~~~~ 373 (574)
..+++++.++|.+||..||.+|+++ .++++||||+..
T Consensus 222 --~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 222 --KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred --CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 3578999999999999999999976 899999999863
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-47 Score=376.50 Aligned_cols=263 Identities=34% Similarity=0.583 Sum_probs=236.9
Q ss_pred cccceee--cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 94 ~~~~y~~--~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+..-|+| .+.||.|.||.||-|+++.+|+.||||+|.+-+. .......+++|+.||+.+ +||.|
T Consensus 560 ~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrF-------------p~kqesqlR~EVaILq~l-~HPGi 625 (888)
T KOG4236|consen 560 ISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRF-------------PTKQESQLRNEVAILQNL-HHPGI 625 (888)
T ss_pred HHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccC-------------CCchHHHHHHHHHHHHhc-CCCCe
Confidence 4455776 4689999999999999999999999999987532 122346889999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
|.+--.|++.+.+++|||-+ .|+.++.++....+++++...+.++.||+.||.|||-++|+|+||||+|||+.+.+.-.
T Consensus 626 V~le~M~ET~ervFVVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FP 704 (888)
T KOG4236|consen 626 VNLECMFETPERVFVVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFP 704 (888)
T ss_pred eEEEEeecCCceEEEEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCC
Confidence 99999999999999999999 67899999999899999999999999999999999999999999999999999876778
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
.+||||||+|+.+.+......++|||.|+|||++..+ |+..-|+||+|||+|--++|..||... .++-.+|.+...-
T Consensus 705 QvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFM 782 (888)
T KOG4236|consen 705 QVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFM 782 (888)
T ss_pred ceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccc
Confidence 9999999999999888777889999999999998765 577789999999999999999999443 3466777778888
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
++..+|..+++++.+||..+|++.-.+|.|.++.|.|||+++.
T Consensus 783 yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 783 YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 8999999999999999999999999999999999999999875
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-46 Score=376.31 Aligned_cols=250 Identities=28% Similarity=0.510 Sum_probs=215.0
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|++..+|+.||||++.+... ......+.+..|..++..+.+||||+++++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~ 68 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI------------LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK 68 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh------------hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC
Confidence 369999999999999999999999999876421 11223456778999998776799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||+++|+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Dfg~~ 143 (321)
T cd05591 69 DRLFFVMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADFGMC 143 (321)
T ss_pred CeEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeecccc
Confidence 99999999999999988774 346789999999999999999999999999999999999998 4789999999998
Q ss_pred cccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+....+..+......++ ..+
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~ 219 (321)
T cd05591 144 KEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWL 219 (321)
T ss_pred eecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence 7543 2223345689999999999875 468899999999999999999999999888888888877654433 347
Q ss_pred CHHHHHHHHHccccCCCCCC-------CHHHHhcCccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARL-------TAAQALSHPWVRE 372 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rp-------s~~~~l~hp~~~~ 372 (574)
+.++.+||.+||..||.+|| ++.++++||||..
T Consensus 220 ~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 220 SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 89999999999999999999 9999999999975
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=380.85 Aligned_cols=259 Identities=29% Similarity=0.499 Sum_probs=221.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||+|+||.||+|.++.+|+.||||++.+... ........+..|+.+++.+ +||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~ 68 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL------------LAQETVSFFEEERDILSIS-NSPWIPQLQY 68 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhC-CCCCCcceee
Confidence 68999999999999999999999999999999976421 1122345678899999988 6999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+||||++||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~ 144 (330)
T cd05601 69 AFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLA 144 (330)
T ss_pred EEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEec
Confidence 999999999999999999999987543 35799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCC--ccccccCccccchHhhh-------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 257 DFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 257 DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~-------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|||++........ ....+||+.|+|||++. ..++.++|||||||++|+|++|+.||...+....+..++..
T Consensus 145 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~ 224 (330)
T cd05601 145 DFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF 224 (330)
T ss_pred cCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC
Confidence 9999987643332 22357999999999985 23578899999999999999999999888887778877765
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
......+..+.+++++.+||..||. +|.+|||+.+++.||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 225 QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 4433333345688999999999998 99999999999999999863
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-46 Score=383.97 Aligned_cols=258 Identities=28% Similarity=0.497 Sum_probs=218.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||+|+||.||+|.++.+++.||||++.+... ........+..|+.++..+ +||||+++++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~ 68 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM------------LEKEQVAHIRAERDILVEA-DGAWVVKMFY 68 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH------------hhhhhHHHHHHHHHHHHhC-CCCCEeeEEE
Confidence 68999999999999999999999999999999975421 1122456788899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+.+.+.+|+|||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~vkL~ 143 (360)
T cd05627 69 SFQDKRNLYLIMEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHVKLS 143 (360)
T ss_pred EEEcCCEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEe
Confidence 99999999999999999999998843 46799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC------------------------------------CccccccCccccchHhhhc-CCCCCcchHhHH
Q 008197 257 DFGLSDFIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 299 (574)
Q Consensus 257 DFG~a~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG 299 (574)
|||++....... .....+||+.|+|||++.+ .++.++||||||
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 999986542110 0124579999999999865 468899999999
Q ss_pred HHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCC---CHHHHhcCcccccc
Q 008197 300 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG 373 (574)
Q Consensus 300 ~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~~~l~hp~~~~~ 373 (574)
|++|+|++|+.||.+.+....+..+.........+....+++++++||.+|+. +|.+|+ ++.++++||||+..
T Consensus 224 vilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 224 VIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred ceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 99999999999999988888888877644333333334578999999999874 999998 48999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-46 Score=382.43 Aligned_cols=259 Identities=28% Similarity=0.472 Sum_probs=220.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|+++.+++.||+|++.+... ........+..|+.+++.+ +||||++++
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~------------~~~~~~~~~~~e~~i~~~~-~hp~iv~~~ 109 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM------------IKRSDSAFFWEERDIMAFA-NSPWVVQLF 109 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh------------hhhHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 579999999999999999999999999999999875321 1112334577899999998 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL 183 (371)
T cd05622 110 YAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKL 183 (371)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEE
Confidence 999999999999999999999987732 4589999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhcC-----CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 263 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence 9999998664322 22356899999999998642 5789999999999999999999999988888888888765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
.....+..+.++..+.+||.+||..++.+ |+++.++++||||+..
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 264 NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 44444445678999999999999854443 7899999999999863
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=369.33 Aligned_cols=257 Identities=26% Similarity=0.383 Sum_probs=209.8
Q ss_pred ceeecccccccCCeEEEEEEEcC-CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv~ 173 (574)
+|++.+.||+|+||.||+|++.. +|+.||||.+..... .......+.+|+.+++.+. +||||++
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~e~~~l~~l~~~~hpniv~ 68 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-------------EEGMPLSTIREVAVLRHLETFEHPNVVR 68 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-------------CCCchHHHHHHHHHHHhhcccCCCCcce
Confidence 69999999999999999999854 468899998865321 0112234567888777763 5999999
Q ss_pred EEEEEE-----cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFE-----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++. ....+++||||+. ++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~--- 144 (290)
T cd07862 69 LFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT--- 144 (290)
T ss_pred EEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---
Confidence 999885 3457999999996 5898888655556789999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+....+.+..+...
T Consensus 145 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~ 224 (290)
T cd07862 145 SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDV 224 (290)
T ss_pred CCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHH
Confidence 478999999999987655444556789999999998854 5688999999999999999999999988777776666543
Q ss_pred CCCCCC-----------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 328 KPDFRR-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 328 ~~~~~~-----------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...... ...+.+++.+.+||.+||+.||++|||+.++|+||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 225 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 211100 0124577889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=375.46 Aligned_cols=256 Identities=26% Similarity=0.445 Sum_probs=219.5
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||+|+||.||+|++..+++.||||++.+... ......+.+..|..++..+.+||+|+.+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~ 68 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV------------IQDDDVECTMVEKRVLALSGKPPFLTQLHS 68 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhccCCCeEeeEEE
Confidence 48899999999999999999999999999999876421 111233456778888888867999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+||||+++|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kL~ 143 (323)
T cd05616 69 CFQTMDRLYFVMEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIA 143 (323)
T ss_pred EEecCCEEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcEEEc
Confidence 99999999999999999999988743 46799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+......++
T Consensus 144 DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p-- 221 (323)
T cd05616 144 DFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP-- 221 (323)
T ss_pred cCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--
Confidence 9999975432 233345689999999998875 468899999999999999999999999888888888877655443
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
..++.++.+++.+||+.+|.+|++ ..++++||||+..
T Consensus 222 --~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 222 --KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred --CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 357899999999999999999998 4899999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=376.34 Aligned_cols=250 Identities=26% Similarity=0.476 Sum_probs=208.2
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.+..+++.||||++.+... ........+..|..++..+.+||||+++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~------------~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~ 68 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV------------NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE 68 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC
Confidence 468999999999999999999999999976421 11223456789999999997799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+|||||+||+|.+++. ...++++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~ 143 (329)
T cd05588 69 SRLFFVIEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMC 143 (329)
T ss_pred CEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccc
Confidence 99999999999999988774 346799999999999999999999999999999999999998 4789999999998
Q ss_pred ccc-CCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC---------hhHHHHHHHhCCCC
Q 008197 262 DFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---------EDGIFKEVLRNKPD 330 (574)
Q Consensus 262 ~~~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~---------~~~~~~~i~~~~~~ 330 (574)
... .........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+......
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (329)
T cd05588 144 KEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR 223 (329)
T ss_pred cccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC
Confidence 753 233344567899999999998754 5889999999999999999999995321 12233444444333
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCC------HHHHhcCccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVRE 372 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps------~~~~l~hp~~~~ 372 (574)
++ ..++..+.++|.+||..||.+||| +.++++||||..
T Consensus 224 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 224 IP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 22 357899999999999999999997 789999999975
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=368.32 Aligned_cols=261 Identities=28% Similarity=0.453 Sum_probs=217.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||+|+||.||++.+..+++.||||++...... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 67 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK------------KRKGEAMALNEKQILEKV-NSRFVVSLAY 67 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh------------hhhhHHHHHHHHHHHHhc-CCCCEeeeee
Confidence 388999999999999999999999999999998754211 012234567899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+++.+|+||||+++|+|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++ +++.++|+
T Consensus 68 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~ 144 (285)
T cd05605 68 AYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRIS 144 (285)
T ss_pred eecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEe
Confidence 999999999999999999998887655456799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
|||++............+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+...........
T Consensus 145 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd05605 145 DLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEY 224 (285)
T ss_pred eCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccccc
Confidence 9999987654444455689999999998864 458889999999999999999999987665443333322211112222
Q ss_pred CCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 336 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 336 ~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
.+.+++.+.+||.+||..||.+|| ++.++++||||...
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 345789999999999999999999 99999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=371.46 Aligned_cols=258 Identities=26% Similarity=0.419 Sum_probs=207.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.++.+|+.||||++..... ......+.+|+.+++.+ +||||++++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~niv~~~ 69 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--------------EGTPFTAIREASLLKGL-KHANIVLLH 69 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--------------cccchhHHHHHHHHhhC-CCCCcCeEE
Confidence 579999999999999999999999999999999865310 11223567899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.++...|+||||+. ++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl 144 (303)
T cd07869 70 DIIHTKETLTLVFEYVH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKL 144 (303)
T ss_pred EEEecCCeEEEEEECCC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEE
Confidence 99999999999999995 688877753 345689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCC-CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC--CC
Q 008197 256 TDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN--KP 329 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~--~~ 329 (574)
+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ...+..+... .+
T Consensus 145 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 224 (303)
T cd07869 145 ADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTP 224 (303)
T ss_pred CCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCC
Confidence 99999875432 223345678999999998864 357889999999999999999999976533 2222222211 00
Q ss_pred ------------CCCCC------------CC--CCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 ------------DFRRK------------PW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ------------~~~~~------------~~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.+... .| ...++.+.+||.+||+.||.+|||+.++++||||++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 225 NEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00000 01 1245678999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=369.16 Aligned_cols=256 Identities=27% Similarity=0.449 Sum_probs=208.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|+++.+++.||||++..... .....+.+.+|+.+++.+ +||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-------------NEEVKETTLRELKMLRTL-KQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-------------cccchhhHHHHHHHHHhC-CCccccchh
Confidence 369999999999999999999999999999999865411 122345678899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+|+||||++++.+. .+. .....+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+||
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~-~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl 141 (287)
T cd07848 67 EAFRRRGKLYLVFEYVEKNMLE-LLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKL 141 (287)
T ss_pred hhEecCCEEEEEEecCCCCHHH-HHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEE
Confidence 9999999999999999887654 333 3345799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC----
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---- 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~---- 328 (574)
+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+.......+....
T Consensus 142 ~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07848 142 CDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLP 221 (287)
T ss_pred eeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCC
Confidence 9999998764322 2334679999999998865 46889999999999999999999998766544333322211
Q ss_pred ----------CCCCCC--------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 ----------PDFRRK--------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ----------~~~~~~--------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
+.+... .+..+|.++.+||.+||+.||.+|||++++|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 222 AEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 000000 012367889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=373.18 Aligned_cols=251 Identities=30% Similarity=0.525 Sum_probs=211.7
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.+..+++.||||++.+... ......+.+..|..++..+.+||||+++++++..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~ 68 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVV------------LEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK 68 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC
Confidence 369999999999999999999999999976421 01123445567777877666799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~e~~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a 143 (316)
T cd05592 69 EHLFFVMEYLNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMC 143 (316)
T ss_pred CEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCC
Confidence 999999999999999887743 45799999999999999999999999999999999999998 4789999999999
Q ss_pred cccCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+....+.++ ..+
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~ 219 (316)
T cd05592 144 KENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWI 219 (316)
T ss_pred eECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence 75432 2333456899999999998754 58899999999999999999999998888777777766543332 347
Q ss_pred CHHHHHHHHHccccCCCCCCCH-HHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~-~~~l~hp~~~~~ 373 (574)
+.++.+||.+||..+|.+||++ .++++||||+..
T Consensus 220 ~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 220 SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 8899999999999999999986 588899999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=373.17 Aligned_cols=251 Identities=28% Similarity=0.505 Sum_probs=212.3
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|+++.+|..||||++.+.... .....+....|..++..+.+||||+++++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~ 68 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL------------IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK 68 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh------------hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC
Confidence 4699999999999999999999999999764210 1123445677888888766799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~ 143 (316)
T cd05620 69 EHLFFVMEFLNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMC 143 (316)
T ss_pred CEEEEEECCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCC
Confidence 999999999999999988743 46789999999999999999999999999999999999998 4788999999998
Q ss_pred cccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+....+.++ ..+
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~ 219 (316)
T cd05620 144 KENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWI 219 (316)
T ss_pred eecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCC
Confidence 75322 223345789999999999875 468899999999999999999999998888777777765544332 247
Q ss_pred CHHHHHHHHHccccCCCCCCCH-HHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~-~~~l~hp~~~~~ 373 (574)
+.++.+||.+||..||.+||++ +++++||||+..
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 8899999999999999999997 588899999864
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=375.50 Aligned_cols=258 Identities=27% Similarity=0.463 Sum_probs=232.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|.+++.+|+|+||.+++++++..+..||+|++..... .........+|+.+++++. |||||.+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~-------------t~~~r~~A~~E~~lis~~~-hP~iv~y~ 69 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL-------------TEPERRSAIQEMDLLSKLL-HPNIVEYK 69 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEecccc-------------CchhhHHHHHHHHHHHhcc-CCCeeeec
Confidence 479999999999999999999999999999999976532 2234457889999999995 99999999
Q ss_pred EEEEcCCE-EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNY-VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~-~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+.|..++. ++|||+||+||+|.+.+..++...++++.+..|+.||+.|+.|||+++|+|||||+.||++.. +..||
T Consensus 70 ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk---~~~Vk 146 (426)
T KOG0589|consen 70 DSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK---DKKVK 146 (426)
T ss_pred cchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc---cCcee
Confidence 99998888 999999999999999999888888999999999999999999999999999999999999994 77889
Q ss_pred EEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||+|+...+.. ...+.+|||.||+||++.+ +|+.++|||||||++|||++-+++|.+.+...+..+|........
T Consensus 147 LgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl 226 (426)
T KOG0589|consen 147 LGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL 226 (426)
T ss_pred ecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC
Confidence 99999999988766 5678899999999999976 579999999999999999999999999999999999988873222
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
....+.+++.+|..||..+|..||++.++|.+|.+...
T Consensus 227 ---p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 227 ---PSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred ---CccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 24578999999999999999999999999999988754
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-45 Score=373.94 Aligned_cols=253 Identities=27% Similarity=0.486 Sum_probs=215.3
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHH---HhcCCCCcceE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ---ALAGHENVVKF 174 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~---~l~~hpniv~~ 174 (574)
|++.+.||+|+||.||+|.+..+|+.||||++.+... ......+.+.+|+.++. .+ +||||+++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~ 67 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI------------IARDEVESLMCEKRIFETANSE-RHPFLVNL 67 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhcccc-CCCChhce
Confidence 6789999999999999999999999999999976421 01123456777777664 45 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+|+||||++||+|...+. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 68 ~~~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~k 141 (324)
T cd05589 68 FACFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVK 141 (324)
T ss_pred eeEEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEE
Confidence 999999999999999999999987763 35799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+.......+......++
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p 221 (324)
T cd05589 142 IADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP 221 (324)
T ss_pred eCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 999999875332 2333457899999999988654 58899999999999999999999998888888888877654433
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
..+++.+.+||.+||..||.+|| ++.++++||||+..
T Consensus 222 ----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 222 ----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred ----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 35789999999999999999999 79999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=376.73 Aligned_cols=257 Identities=26% Similarity=0.503 Sum_probs=212.4
Q ss_pred ceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+|++++.||+|+||.||+|++. .+|+.||+|++.+.... ......+.+..|+.+++.+.+||||++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~~~e~~~l~~l~~~~~i~~ 69 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV-----------QKAKTVEHTRTERNVLEHVRQSPFLVT 69 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh-----------hhhhHHHHHHHHHHHHHhccCCCCccc
Confidence 4889999999999999999864 47899999998764211 011234567889999999977999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++...+.+|+||||+++|+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~ 144 (332)
T cd05614 70 LHYAFQTEAKLHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHV 144 (332)
T ss_pred EEEEEecCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCE
Confidence 99999999999999999999999998853 35799999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC--CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCC----hhHHHHHHH
Q 008197 254 KATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVL 325 (574)
Q Consensus 254 kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~----~~~~~~~i~ 325 (574)
||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.... .......+.
T Consensus 145 kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 224 (332)
T cd05614 145 VLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL 224 (332)
T ss_pred EEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh
Confidence 99999999764332 223356899999999998753 5788999999999999999999996432 223334444
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
...+.+ .+.+++.+.+||.+||..||++|| ++.++++||||+..
T Consensus 225 ~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 225 KCDPPF----PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred cCCCCC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 433322 245789999999999999999999 88999999999863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-46 Score=376.66 Aligned_cols=250 Identities=30% Similarity=0.540 Sum_probs=213.4
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.+..+|+.||+|++.+... ........+..|+.+++.+ +||||+++++++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~ 67 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI------------VAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTH 67 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcC
Confidence 368999999999999999999999999976421 1112345677899999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
+.+|+||||++||+|..++. ....+++..+..++.||+.||.|||+ .||+||||||+|||++ .++.+||+|||+
T Consensus 68 ~~~~lv~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~ 142 (325)
T cd05594 68 DRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGL 142 (325)
T ss_pred CEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEecCCC
Confidence 99999999999999988774 34579999999999999999999997 7999999999999998 478999999999
Q ss_pred ccccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 261 SDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 261 a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
+.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......++ ..
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~ 218 (325)
T cd05594 143 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RT 218 (325)
T ss_pred CeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CC
Confidence 87532 2233345689999999999865 468899999999999999999999988887777777766554433 35
Q ss_pred CCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+++++.+||.+||..||++|+ ++.++++||||...
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 789999999999999999997 99999999999863
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-46 Score=374.13 Aligned_cols=245 Identities=27% Similarity=0.392 Sum_probs=211.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.+++++.||+|.||.||.|.+.. ...||+|.++... ...+.+.+|+.||++|+ |++||++++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~----------------m~~~~f~~Ea~iMk~L~-H~~lV~l~g 268 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS----------------MSPEAFLREAQIMKKLR-HEKLVKLYG 268 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc----------------cChhHHHHHHHHHHhCc-ccCeEEEEE
Confidence 46788999999999999998643 2389999987652 24467889999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+|..++.+||||||++.|+|.++|.......+...+...++.|||+|++||.++++|||||...|||++ ++..|||+
T Consensus 269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---~~~~vKIs 345 (468)
T KOG0197|consen 269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---EDLVVKIS 345 (468)
T ss_pred EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---cCceEEEc
Confidence 999988999999999999999999765678899999999999999999999999999999999999999 58899999
Q ss_pred eeccccccCCCCCcc--ccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 257 DFG~a~~~~~~~~~~--~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|||||+.+..+.... ..--...|.|||++. +.++.++|||||||+||||+| |+.||.+.+..+++..+-++..-
T Consensus 346 DFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl-- 423 (468)
T KOG0197|consen 346 DFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL-- 423 (468)
T ss_pred ccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC--
Confidence 999999554332211 122234699999886 668999999999999999999 99999999999999999887543
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHh
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l 365 (574)
+..+..|+++.+++..||..+|++|||...+.
T Consensus 424 -p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 424 -PRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 23356899999999999999999999998654
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-46 Score=389.92 Aligned_cols=257 Identities=23% Similarity=0.425 Sum_probs=209.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|++++.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.+ +||||+++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------------------~~~~~Ei~il~~l-~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------------------QYKNRELLIMKNL-NHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------------------chHHHHHHHHHhc-CCCCCcce
Confidence 457999999999999999999999999999999885431 1234799999999 59999999
Q ss_pred EEEEEcC--------CEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 175 YNAFEDD--------NYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 175 ~~~~~~~--------~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
+++|... ..+++||||+++ +|.+.+.. .....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl 203 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI 203 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE
Confidence 9887432 257899999975 67666532 235679999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
+. ..+.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+.
T Consensus 204 ~~--~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 281 (440)
T PTZ00036 204 DP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV 281 (440)
T ss_pred cC--CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 84 345799999999987665555556789999999998765 46889999999999999999999998887666555
Q ss_pred HHHhCCC-----------------CCCCCC-------C-CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 323 EVLRNKP-----------------DFRRKP-------W-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 323 ~i~~~~~-----------------~~~~~~-------~-~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.++.... .++... + ...|+++.+||.+||++||.+|||+.++|+||||.+..
T Consensus 282 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 282 RIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred HHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 5543210 001000 1 13578899999999999999999999999999998653
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-47 Score=353.64 Aligned_cols=256 Identities=31% Similarity=0.560 Sum_probs=232.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|..+++||+|.||+|-+++.+.+|+.+|||++++..+ +....++.-..|-++|+.. .||.+..+-
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi------------iakdEVAHTlTE~RVL~~~-~HPFLt~LK 234 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI------------IAKDEVAHTLTENRVLQNC-RHPFLTSLK 234 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe------------eehHHhhhhhhHHHHHHhc-cCcHHHHhh
Confidence 578999999999999999999999999999999998743 2234566778899999999 499999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
-.|+..+++|+||||+.||.|+-+| +....+++..++.+-..|+.||.|||+++||+||||.+|+|++ .+|++||
T Consensus 235 YsFQt~drlCFVMeyanGGeLf~HL--srer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD---kDGHIKi 309 (516)
T KOG0690|consen 235 YSFQTQDRLCFVMEYANGGELFFHL--SRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD---KDGHIKI 309 (516)
T ss_pred hhhccCceEEEEEEEccCceEeeeh--hhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec---cCCceEe
Confidence 9999999999999999999998877 4457799999999999999999999999999999999999999 5899999
Q ss_pred Eeeccccc-cCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~-~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+++. +..+....++||||.|+|||++.. .|+.++|+|.+||++|||++|+.||...+...++..|+.....|+.
T Consensus 310 tDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr 389 (516)
T KOG0690|consen 310 TDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR 389 (516)
T ss_pred eecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc
Confidence 99999974 455667789999999999999974 5799999999999999999999999999999999999998888774
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
.++++++.|+..+|.+||.+|. .|.++..|+||...
T Consensus 390 ----~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 390 ----TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred ----cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence 6899999999999999999997 48999999999874
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=372.67 Aligned_cols=251 Identities=29% Similarity=0.523 Sum_probs=214.7
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.+..+++.||||++.+... ........+..|..++..+.+||||+++++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~ 68 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI------------LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK 68 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH------------hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC
Confidence 469999999999999999999999999976421 11123456778999998886799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|...+. ....+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~ 143 (318)
T cd05570 69 DRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMC 143 (318)
T ss_pred CEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCC
Confidence 99999999999999988774 345799999999999999999999999999999999999998 4789999999998
Q ss_pred cccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......++ ..+
T Consensus 144 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~ 219 (318)
T cd05570 144 KEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWL 219 (318)
T ss_pred eecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcC
Confidence 7532 2223345679999999999875 468899999999999999999999988887777777776554333 357
Q ss_pred CHHHHHHHHHccccCCCCCCCH-----HHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~-----~~~l~hp~~~~~ 373 (574)
+..+.+||.+||..||.+|||+ .+++.||||+..
T Consensus 220 ~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 220 SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 8999999999999999999999 999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-45 Score=370.63 Aligned_cols=251 Identities=29% Similarity=0.506 Sum_probs=212.0
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.+..+++.||||++.+.... ..........|..++..+.+||||+++++++.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~ 68 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL------------MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK 68 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh------------hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC
Confidence 4699999999999999999999999999764210 0122345667888887765799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~ 143 (316)
T cd05619 69 ENLFFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMC 143 (316)
T ss_pred CEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcc
Confidence 999999999999999988743 35789999999999999999999999999999999999998 4788999999998
Q ss_pred cccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+....+.++ ..+
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~ 219 (316)
T cd05619 144 KENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWL 219 (316)
T ss_pred eECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccC
Confidence 75322 223345689999999999865 468899999999999999999999988887777777765543322 247
Q ss_pred CHHHHHHHHHccccCCCCCCCHH-HHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~~-~~l~hp~~~~~ 373 (574)
+.++.+||.+||..||.+||++. ++++||||+..
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 88999999999999999999996 89999999874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-45 Score=370.71 Aligned_cols=256 Identities=25% Similarity=0.446 Sum_probs=218.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|.++.+|+.||||++.+... ......+.+..|..++..+.+||+|+++++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~ 68 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV------------IQDDDVECTMVEKRVLALQDKPPFLTQLHS 68 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhccCCCchhheee
Confidence 37788999999999999999999999999999876421 111234567789999988876788999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+||||++||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~ 143 (323)
T cd05615 69 CFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIA 143 (323)
T ss_pred EEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEe
Confidence 9999999999999999999998874 346799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+......++
T Consensus 144 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p-- 221 (323)
T cd05615 144 DFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP-- 221 (323)
T ss_pred ccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--
Confidence 99998754322 223456799999999998654 58899999999999999999999999888888888877654433
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
..++.++.+++.+||..+|.+|++ ..++++||||+..
T Consensus 222 --~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 222 --KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred --ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 357899999999999999999997 5799999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=372.40 Aligned_cols=251 Identities=25% Similarity=0.469 Sum_probs=207.6
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|+++.+++.||+|++.+... ........+..|+.++..+.+||||+++++++...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~ 68 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELV------------NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 68 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHh------------cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC
Confidence 469999999999999999999999999976421 11223456788999988886799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||+++|+|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~DfG~~ 143 (329)
T cd05618 69 SRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMC 143 (329)
T ss_pred CEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeCCcc
Confidence 99999999999999988774 346799999999999999999999999999999999999998 4789999999998
Q ss_pred cccC-CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCC---------ChhHHHHHHHhCCCC
Q 008197 262 DFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRNKPD 330 (574)
Q Consensus 262 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~---------~~~~~~~~i~~~~~~ 330 (574)
.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||... ........+......
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~ 223 (329)
T cd05618 144 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 223 (329)
T ss_pred ccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC
Confidence 7532 23334456899999999998754 588999999999999999999999521 112233444444333
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCC------HHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps------~~~~l~hp~~~~~ 373 (574)
++ ..++..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 224 ~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 224 IP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 22 457889999999999999999998 5799999999763
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-47 Score=401.92 Aligned_cols=259 Identities=29% Similarity=0.491 Sum_probs=229.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.|++.||+|+||.|.+++++.+++.||+|++.+..+..+ ....-|..|-+||..- +.+.|+.++
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr------------~~tA~F~EERDimv~~-ns~Wiv~Lh 141 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKR------------AETACFREERDIMVFG-NSEWIVQLH 141 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhc------------hhHHHHHHHhHHHHcC-CcHHHHHHH
Confidence 479999999999999999999999999999999988643322 3445678888998776 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
-.|+++.++|+||||++||+|...+ .+..++++..++.|+..|+.||.-||+.|+|||||||+||||+ ..|+|||
T Consensus 142 yAFQD~~~LYlVMdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---~~GHikL 216 (1317)
T KOG0612|consen 142 YAFQDERYLYLVMDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---KSGHIKL 216 (1317)
T ss_pred HHhcCccceEEEEecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---ccCcEee
Confidence 9999999999999999999999877 4445899999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+|||.+-.+.... .....+|||.|++||++. +.|++.+|+||+||++|||++|.+||+..+.-+.|.+|+..
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h 296 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH 296 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch
Confidence 9999987765332 235679999999999984 45789999999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHHHhcCcccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~~l~hp~~~~~ 373 (574)
+..+..+....+|+++++||+++++ +|..|.. +.++..||||...
T Consensus 297 k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~ 344 (1317)
T KOG0612|consen 297 KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI 344 (1317)
T ss_pred hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence 6665555556799999999999998 6889998 9999999999875
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=374.09 Aligned_cols=259 Identities=30% Similarity=0.473 Sum_probs=207.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|++..+|..||||++..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-------------HVSDATRILREIKLLRLL-RHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-------------cchhHHHHHHHHHHHHhC-CCCCEeeecc
Confidence 58999999999999999999999999999998864210 012234678999999999 5999999999
Q ss_pred EEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 177 AFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 177 ~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++... ..+|+|||||. ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~ 140 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN---ADC 140 (338)
T ss_pred eEeccCCCCCceEEEEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCC
Confidence 88543 35899999995 68888774 345799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCC----CccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.........+
T Consensus 141 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~ 220 (338)
T cd07859 141 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLI 220 (338)
T ss_pred cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Confidence 99999999997543211 1234689999999999864 5688999999999999999999999776543322211
Q ss_pred Hh---------------------------CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 325 LR---------------------------NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 325 ~~---------------------------~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.. ..+......++.+++.+.++|.+||..||++|||+.++++||||+....
T Consensus 221 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 221 TDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 10 0000011123567888999999999999999999999999999987544
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-45 Score=371.85 Aligned_cols=250 Identities=28% Similarity=0.491 Sum_probs=210.4
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHH-HHHhcCCCCcceEEEEEEc
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFED 180 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i-l~~l~~hpniv~~~~~~~~ 180 (574)
+.||+|+||+||+|++..+|+.||||++.+.... .......+..|..+ ++.+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~ 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL------------KKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQT 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh------------hhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEe
Confidence 3699999999999999999999999998764211 11123445566554 4667 69999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
.+.+|+||||++||+|..++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~ 142 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGL 142 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCC
Confidence 999999999999999998874 346799999999999999999999999999999999999998 478999999999
Q ss_pred ccccC-CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 261 SDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 261 a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
+.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+....... .+.
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~----~~~ 218 (323)
T cd05575 143 CKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL----KPN 218 (323)
T ss_pred CcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC----CCC
Confidence 87532 22333456899999999988654 5789999999999999999999999888888888887664433 246
Q ss_pred CCHHHHHHHHHccccCCCCCCCH----HHHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~----~~~l~hp~~~~~ 373 (574)
+++.+.++|.+||+.||.+||++ .++++||||...
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 219 ISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 78999999999999999999987 699999999763
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-45 Score=369.64 Aligned_cols=261 Identities=27% Similarity=0.479 Sum_probs=217.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||++++..+++.||||++.+... ......+.+..|+.++..+ +||||+.++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM------------LKRAETACFREERDVLVNG-DRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH------------hhhhhHHHHHHHHHHHHhC-CCCCCCceE
Confidence 369999999999999999999999999999999875321 1122345678899999998 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++++|+||||++||+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl 143 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRL 143 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEE
Confidence 999999999999999999999988743 245789999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+|||++........ ....+||+.|+|||++.. .++.++|||||||++|+|++|+.||.+....+.+..+...
T Consensus 144 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~ 223 (331)
T cd05597 144 ADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223 (331)
T ss_pred EECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 99999876543322 223579999999999862 3577899999999999999999999888777777777664
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 328 KPDFRR-KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
...+.. ...+.+++.+++||++||..++.+ |+++.++++||||...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 224 KEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 433322 223458999999999999765544 7899999999999763
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-45 Score=370.15 Aligned_cols=251 Identities=31% Similarity=0.555 Sum_probs=212.6
Q ss_pred ccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 102 KLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.||+|+||.||++++. .+++.||||++.+..... .......+..|+.+|+.+ +||||+++++++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~-----------~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~ 69 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR-----------NQKDTAHTKAERNILEAV-KHPFIVDLIYAF 69 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh-----------hhhhHHHHHHHHHHHHhC-CCCchhceeeEE
Confidence 57999999999999863 478899999987642100 012334678899999999 599999999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
..++.+|+||||++||+|.+.+. ..+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Df 144 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD---AQGHVKLTDF 144 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEeeC
Confidence 99999999999999999998874 346789999999999999999999999999999999999998 4789999999
Q ss_pred ccccccCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008197 259 GLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336 (574)
Q Consensus 259 G~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 336 (574)
|++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+..+...++
T Consensus 145 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~---- 220 (323)
T cd05584 145 GLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP---- 220 (323)
T ss_pred cCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 99875322 2233456899999999988654 57899999999999999999999988887777777777654332
Q ss_pred CCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 337 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 337 ~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.+++.+.+||.+||..+|.+|| ++.+++.||||+..
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 45789999999999999999999 89999999999863
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-45 Score=363.26 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=208.5
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcceE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVVKF 174 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv~~ 174 (574)
+|++.+.||+|+||.||+|+++.+|+.||+|.+..... .......+.+|+.+++.+. +||||+++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l~~~~h~ni~~~ 67 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTN-------------EDGLPLSTVREVALLKRLEAFDHPNIVRL 67 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcC-------------CCCCchHHHHHHHHHHHhhhcCCCCeeee
Confidence 58999999999999999999999999999999865311 0111234567777777663 59999999
Q ss_pred EEEEEc-----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 175 YNAFED-----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 175 ~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
++++.. ...+++||||+. ++|.+++.......+++..++.++.||+.||.|||+.||+||||||+|||++ .
T Consensus 68 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~ 143 (288)
T cd07863 68 MDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---S 143 (288)
T ss_pred eeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---C
Confidence 998864 356899999997 4888877655555699999999999999999999999999999999999998 4
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|++||.+......+..+....
T Consensus 144 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 223 (288)
T cd07863 144 GGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 223 (288)
T ss_pred CCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHh
Confidence 78899999999987655444456688999999998864 46889999999999999999999998877665555544311
Q ss_pred CC----------------CC-------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 PD----------------FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ~~----------------~~-------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.. +. ....+.++..+.+||.+||+.||.+|||+.+++.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 224 GLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred CCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00 00 01124577889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=360.13 Aligned_cols=254 Identities=27% Similarity=0.425 Sum_probs=206.2
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||+|+||+||+|.++.+|+.||||.+.+.... .....+.+..|+.+++.+ +||||+++++++..++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~ 67 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK------------KRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTD 67 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh------------hhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCe
Confidence 79999999999999999999999998754211 112335677899999999 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 184 VYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+|+||||++||+|.+.+.. .....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus 68 ~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~ 144 (280)
T cd05608 68 LCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGLA 144 (280)
T ss_pred EEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCccc
Confidence 9999999999999877643 2345699999999999999999999999999999999999998 4788999999999
Q ss_pred cccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 262 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 262 ~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||...........+............+.+
T Consensus 145 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (280)
T cd05608 145 VELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKF 224 (280)
T ss_pred eecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccC
Confidence 7654432 2345689999999998865 4578999999999999999999999765432222222211111111222458
Q ss_pred CHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
++.+.+|+.+||+.||.+|| +++++++||||+..
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 89999999999999999999 88999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-45 Score=373.25 Aligned_cols=250 Identities=28% Similarity=0.511 Sum_probs=211.3
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcceEEEEEEcC
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVVKFYNAFEDD 181 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv~~~~~~~~~ 181 (574)
||+|+||.||+|++..+|+.||||++.+.... ..........|..++..+. +||||+++++++...
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~ 68 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV------------AKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD 68 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh------------hhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC
Confidence 79999999999999999999999998754211 0112334556777777664 699999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||+++|+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a 143 (330)
T cd05586 69 SDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLS 143 (330)
T ss_pred CeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcC
Confidence 99999999999999998874 346799999999999999999999999999999999999998 4789999999998
Q ss_pred cccCC-CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 262 DFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 262 ~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....+.+..+..+...++. ..
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~ 220 (330)
T cd05586 144 KANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NV 220 (330)
T ss_pred cCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---cc
Confidence 75432 233446789999999999864 3588999999999999999999999998888888887766554432 34
Q ss_pred CCHHHHHHHHHccccCCCCCC----CHHHHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rp----s~~~~l~hp~~~~~ 373 (574)
+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 221 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 221 LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 789999999999999999998 79999999999863
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-45 Score=376.32 Aligned_cols=251 Identities=22% Similarity=0.382 Sum_probs=203.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|.+++.||+|+||.||+|.+..+++.||||.... ..+.+|+.+++.| +||||++++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------------------~~~~~E~~il~~l-~HpnIv~~~ 149 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------------------GGTATEAHILRAI-NHPSIIQLK 149 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------------------hhhHHHHHHHHhC-CCCCCCCEe
Confidence 479999999999999999999999999999996432 2457899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|......++|+|++. ++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||
T Consensus 150 ~~~~~~~~~~lv~e~~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL 223 (391)
T PHA03212 150 GTFTYNKFTCLILPRYK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCL 223 (391)
T ss_pred EEEEECCeeEEEEecCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEE
Confidence 99999999999999995 688887743 35689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCC--CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh-------hHHHHHHH
Q 008197 256 TDFGLSDFIKP--GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVL 325 (574)
Q Consensus 256 ~DFG~a~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~-------~~~~~~i~ 325 (574)
+|||+|..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||..... ...+..++
T Consensus 224 ~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~ 303 (391)
T PHA03212 224 GDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII 303 (391)
T ss_pred EeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH
Confidence 99999975432 123345689999999998865 468899999999999999999988864321 11111111
Q ss_pred hCC--------------------------CC--CCCCCC---CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 RNK--------------------------PD--FRRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~~~--------------------------~~--~~~~~~---~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... .. ...+.| ..++.++.+||.+||+.||.+|||+.++|+||||+...
T Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~ 383 (391)
T PHA03212 304 RRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP 383 (391)
T ss_pred HHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence 100 00 001111 13466899999999999999999999999999998753
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=367.51 Aligned_cols=251 Identities=25% Similarity=0.450 Sum_probs=208.0
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.+..+++.||||++.+... ........+..|+.++.++.+||||+.+++++.+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 68 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV------------HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT 68 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC
Confidence 469999999999999999999999999976421 11234456889999999987799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+||||++||+|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 69 ~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~ 143 (327)
T cd05617 69 SRLFLVIEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMC 143 (327)
T ss_pred CEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccc
Confidence 99999999999999988774 345799999999999999999999999999999999999998 4788999999998
Q ss_pred ccc-CCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC-------hhHHHHHHHhCCCCCC
Q 008197 262 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-------EDGIFKEVLRNKPDFR 332 (574)
Q Consensus 262 ~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~-------~~~~~~~i~~~~~~~~ 332 (574)
... .........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... .......+......++
T Consensus 144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p 223 (327)
T cd05617 144 KEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP 223 (327)
T ss_pred eeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC
Confidence 753 22333456789999999999865 46889999999999999999999995321 1223333433322222
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCC------HHHHhcCcccccc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 373 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps------~~~~l~hp~~~~~ 373 (574)
..++..+.++|.+||..||.+|++ +.++++||||+..
T Consensus 224 ----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 224 ----RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred ----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 357899999999999999999998 5799999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=366.53 Aligned_cols=258 Identities=26% Similarity=0.371 Sum_probs=212.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||++++..+|..||+|.+.... .......+.+|+.+|+.+ +||||++++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 69 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--------------KPAIRNQIIRELQVLHEC-NSPYIVGFY 69 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--------------CHHHHHHHHHHHHHHHHC-CCCCCCeEE
Confidence 57999999999999999999999999999999986531 123456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++..++.+++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+|
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~k 144 (331)
T cd06649 70 GAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIK 144 (331)
T ss_pred EEEEECCEEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEE
Confidence 999999999999999999999998743 35689999999999999999999986 699999999999998 478899
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC-----
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK----- 328 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~----- 328 (574)
|+|||++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+....+-...
T Consensus 145 l~Dfg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (331)
T cd06649 145 LCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEE 223 (331)
T ss_pred EccCccccccccc-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccccc
Confidence 9999999765432 2345679999999999875 46889999999999999999999997655433322111000
Q ss_pred ---------------------------------------CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 329 ---------------------------------------PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 329 ---------------------------------------~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
...+......+++++.+||.+||..||++|||+.++++|||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 224 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred CCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 00000111246788999999999999999999999999999
Q ss_pred ccccC
Q 008197 370 VREGG 374 (574)
Q Consensus 370 ~~~~~ 374 (574)
|+...
T Consensus 304 ~~~~~ 308 (331)
T cd06649 304 IKRSE 308 (331)
T ss_pred Hhhcc
Confidence 98643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-45 Score=368.81 Aligned_cols=250 Identities=27% Similarity=0.478 Sum_probs=210.2
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHH-HHHhcCCCCcceEEEEEEc
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI-LQALAGHENVVKFYNAFED 180 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i-l~~l~~hpniv~~~~~~~~ 180 (574)
+.||+|+||+||+|+++.+|+.||||++.+.... .......+..|..+ ++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~ 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL------------NRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQT 67 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh------------hhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEec
Confidence 4699999999999999999999999998764210 11223455666654 5556 69999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
.+.+|+||||++||+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~ 142 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGL 142 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCC
Confidence 999999999999999988774 446799999999999999999999999999999999999998 478999999999
Q ss_pred ccccC-CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 261 SDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 261 a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
+.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|..||...+..+.+..+.......+ +.
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~ 218 (325)
T cd05604 143 CKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PG 218 (325)
T ss_pred cccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CC
Confidence 87532 22333456899999999998754 58899999999999999999999998888888888776544332 46
Q ss_pred CCHHHHHHHHHccccCCCCCCCH----HHHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~----~~~l~hp~~~~~ 373 (574)
.+..+.++|.+||..+|.+||++ .+++.||||...
T Consensus 219 ~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 219 ASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 78999999999999999999976 589999999863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=358.88 Aligned_cols=257 Identities=26% Similarity=0.462 Sum_probs=213.2
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||+|+||.||+|.+..+++.||||.+.+... ........+.+|+.+++.+ +||+|+.+++.
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~------------~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~ 68 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI------------KKRKGESMALNEKQILEKV-NSRFVVSLAYA 68 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhc------------cchHHHHHHHHHHHHHHhC-CCCCeeeeeEE
Confidence 7788899999999999999999999999999875421 0112234567899999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+.+.+.+|+||||++|++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|
T Consensus 69 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~D 145 (285)
T cd05630 69 YETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISD 145 (285)
T ss_pred EecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEee
Confidence 99999999999999999999888655555799999999999999999999999999999999999998 477899999
Q ss_pred eccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh---HHHHHHHhCCCCCCC
Q 008197 258 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKPDFRR 333 (574)
Q Consensus 258 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~---~~~~~i~~~~~~~~~ 333 (574)
||++.............||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.... ..
T Consensus 146 fg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~ 222 (285)
T cd05630 146 LGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---QE 222 (285)
T ss_pred ccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---hh
Confidence 999977654444445689999999999865 4688999999999999999999999765432 2222222211 11
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
.....+++++.+||.+||+.||.+||| +.++++||||++.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 123457889999999999999999999 9999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=366.29 Aligned_cols=260 Identities=26% Similarity=0.456 Sum_probs=217.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+++++.+++.||+|++.+... ........+..|+.++..+ +||+|+.+++
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~ 68 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM------------LKRAETACFREERDVLVNG-DNQWITTLHY 68 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH------------HHhhHHHHHHHHHHHHhhC-CCCCEeeEEE
Confidence 68999999999999999999999999999999865321 1112334578899999988 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+|+||||+++|+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~ 144 (332)
T cd05623 69 AFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLA 144 (332)
T ss_pred EEecCCEEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEe
Confidence 999999999999999999999988542 35789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCC--ccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 257 DFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 257 DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
|||++........ ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||...+..+.+..+....
T Consensus 145 DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~ 224 (332)
T cd05623 145 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK 224 (332)
T ss_pred ecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC
Confidence 9999875433222 23458999999999985 245789999999999999999999999888888888887655
Q ss_pred CCCCCC-CCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 329 PDFRRK-PWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
..+..+ .+..+++++.+||.+||..++.+ |+++.++++||||...
T Consensus 225 ~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 225 ERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred ccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 433222 23467999999999999765554 6899999999999863
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=366.06 Aligned_cols=260 Identities=26% Similarity=0.466 Sum_probs=217.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||.||+++++.+++.||||++.+... ........+..|+.++..+ +||||+.++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM------------LKRAETACFREERNVLVNG-DCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH------------HhhHHHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 369999999999999999999999999999999875321 1112345578899999988 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+..|+||||++||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl 143 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRL 143 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEE
Confidence 9999999999999999999999988542 35789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCc--cccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 256 TDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+|||++......... ...+||+.|+|||++.+ .++.++|||||||++|+|++|+.||......+.+..+...
T Consensus 144 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~ 223 (331)
T cd05624 144 ADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223 (331)
T ss_pred EeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC
Confidence 999999766433222 23579999999999864 4578899999999999999999999888877777777765
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCccccc
Q 008197 328 KPDFRR-KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVRE 372 (574)
Q Consensus 328 ~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~ 372 (574)
...+.. ..+..+++++.+||.+||..++.+ |++++++++||||+.
T Consensus 224 ~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 224 EERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred CCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 433322 223567899999999999976654 468999999999985
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=371.24 Aligned_cols=257 Identities=35% Similarity=0.606 Sum_probs=233.5
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
...|.+.+.||+|.|++|.+|++..+|..||||.+++... .....+.+.+|+++|+.| +|||||++
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-------------n~~~~~k~~rev~imk~l-~HPnIvkl 120 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-------------NPSKRQKLGREVDIMKSL-NHPNIVKL 120 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-------------ChHHHHHHHHHHHHHHhc-CCcceeee
Confidence 3569999999999999999999999999999999988632 234456689999999999 69999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+.+.+....+|+||||+.+|.+++++ .+.+++.+..++.++.|++.|++|||+++|||||||++||||+ .+.++|
T Consensus 121 ~~v~~t~~~lylV~eya~~ge~~~yl--~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mnik 195 (596)
T KOG0586|consen 121 FSVIETEATLYLVMEYASGGELFDYL--VKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMNIK 195 (596)
T ss_pred eeeeeecceeEEEEEeccCchhHHHH--HhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---ccccee
Confidence 99999999999999999999999999 4557888999999999999999999999999999999999999 477899
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++.++..+....+.||++.|.|||++.+.. ++.+|+||+|++||-|+.|.+||.+.+..++...++.++...+
T Consensus 196 IaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp 275 (596)
T KOG0586|consen 196 IADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIP 275 (596)
T ss_pred eeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccc
Confidence 99999999998888889999999999999998753 7899999999999999999999999998888888888776555
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
. .++-++.++|+++|..+|.+|++.+++..|.|.....
T Consensus 276 ~----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 276 F----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred c----eeechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 3 4788999999999999999999999999999987543
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=371.43 Aligned_cols=256 Identities=27% Similarity=0.398 Sum_probs=207.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|++++.||+|+||.||+|++..+|+.||||++.... .......+.+|+.+++.+ +||||++++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 138 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--------------EDTVRRQICREIEILRDV-NHPNVVKCH 138 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--------------cHHHHHHHHHHHHHHHhC-CCCCcceee
Confidence 46888999999999999999999999999999986531 122345788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+|+||||+.+|+|.+. ...++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 139 ~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL 209 (353)
T PLN00034 139 DMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKI 209 (353)
T ss_pred eEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEE
Confidence 999999999999999999998542 2456788899999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhc-----C-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-----K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||++....... .....+||..|+|||++.. . .+.++|||||||++|+|++|+.||...........+....
T Consensus 210 ~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 289 (353)
T PLN00034 210 ADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC 289 (353)
T ss_pred cccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh
Confidence 9999998654322 2345689999999998743 2 2468999999999999999999997443322221111111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..........++.++.+||.+||..||++|||+.++++||||.....
T Consensus 290 ~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 290 MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 11122223467899999999999999999999999999999998643
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-44 Score=356.05 Aligned_cols=260 Identities=28% Similarity=0.454 Sum_probs=217.1
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||.|+||+||+|.+..+++.||+|.+...... .......+.+|+.+++.+ +|+||+.++++
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~E~~il~~l-~~~~i~~~~~~ 68 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK------------KRKGESMALNEKQILEKV-NSQFVVNLAYA 68 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh------------hhhHHHHHHHHHHHHHHc-CCcCceeEEEE
Confidence 77888999999999999999999999999998654210 112234567899999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+..++..|+||||+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||+|
T Consensus 69 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~D 145 (285)
T cd05632 69 YETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISD 145 (285)
T ss_pred EecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEec
Confidence 99999999999999999998887655555799999999999999999999999999999999999998 467899999
Q ss_pred eccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008197 258 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336 (574)
Q Consensus 258 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 336 (574)
||++.............|++.|+|||++.+ .++.++|+|||||++|+|++|..||.+.........+............
T Consensus 146 fg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T cd05632 146 LGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYS 225 (285)
T ss_pred CCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccC
Confidence 999976554444455689999999998864 4688899999999999999999999877655444444332222222233
Q ss_pred CCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 337 PSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 337 ~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+.++.++.+|+.+||..||.+||+ +.+++.||||+..
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 226 AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 567889999999999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=367.39 Aligned_cols=249 Identities=30% Similarity=0.525 Sum_probs=212.7
Q ss_pred ccccccCCeEEEEEEE---cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 102 KLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.||+|+||.||++++ ..+|+.||+|++.+.... ......+..|+.+|+++ +||||+++++++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-------------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 67 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-------------VRDRVRTKMERDILAEV-NHPFIVKLHYAF 67 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-------------hhhHHHHHHHHHHHHhC-CCCCcccEEEEE
Confidence 5799999999999986 357899999999764211 11234567899999999 599999999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
.+++.+|+||||+++|+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 68 ~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Df 142 (318)
T cd05582 68 QTEGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDF 142 (318)
T ss_pred EcCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeec
Confidence 99999999999999999998874 345799999999999999999999999999999999999998 4788999999
Q ss_pred ccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008197 259 GLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336 (574)
Q Consensus 259 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 336 (574)
|++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+......++
T Consensus 143 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p---- 218 (318)
T cd05582 143 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP---- 218 (318)
T ss_pred cCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 999765433 233456899999999998754 58899999999999999999999998888777777776654433
Q ss_pred CCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 337 PSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 337 ~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+.+++.+.+||.+||+.||.+||+ +.+++.||||+..
T Consensus 219 ~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 219 QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 357899999999999999999999 7789999999864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-44 Score=365.78 Aligned_cols=250 Identities=28% Similarity=0.476 Sum_probs=209.0
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHH-HHHHhcCCCCcceEEEEEEc
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~~hpniv~~~~~~~~ 180 (574)
+.||+|+||.||+|++..+++.||+|++.+.... .......+..|.. +++.+ +||||+++++++..
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~ 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL------------KKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQT 67 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH------------hhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEc
Confidence 3699999999999999999999999999764211 0112234455554 45667 69999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
.+.+|+||||++||+|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~ 142 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGL 142 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCC
Confidence 999999999999999998874 346789999999999999999999999999999999999998 478999999999
Q ss_pred ccccC-CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 261 SDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 261 a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
+.... ........+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..+.+..+......+ .+.
T Consensus 143 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~ 218 (325)
T cd05602 143 CKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPN 218 (325)
T ss_pred CcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCC
Confidence 87542 22334456899999999988764 5789999999999999999999999988888888777654332 356
Q ss_pred CCHHHHHHHHHccccCCCCCCCHH----HHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTAA----QALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~~----~~l~hp~~~~~ 373 (574)
+++.+.++|.+||+.+|.+||++. ++++|+||...
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 219 ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 889999999999999999999876 89999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-44 Score=354.68 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=207.3
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||+|+||.||++.++.+|+.||+|.+...... .......+..|+.+++.+ +||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~------------~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLK------------KKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhh------------cchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCe
Confidence 79999999999999999999999998654210 011223456799999999 69999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
+|+||||++|++|.+.+.......+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+|||++..
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVE 144 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeeee
Confidence 99999999999999888655556689999999999999999999999999999999999998 478899999999987
Q ss_pred cCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----HHHHHHHhCCCCCCCCCCCC
Q 008197 264 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 264 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~----~~~~~i~~~~~~~~~~~~~~ 338 (574)
...........||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .+..........+ ....
T Consensus 145 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 221 (277)
T cd05607 145 LKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQN 221 (277)
T ss_pred cCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---cccc
Confidence 655444455689999999998864 4688999999999999999999999764332 2333333322221 2245
Q ss_pred CCHHHHHHHHHccccCCCCCCCH----HHHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~----~~~l~hp~~~~~ 373 (574)
+++++.+||.+||+.||.+||++ ++++.||||+..
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 78999999999999999999999 678899999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=362.64 Aligned_cols=259 Identities=25% Similarity=0.430 Sum_probs=211.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||.||+|+++.++..||||.+..... ......+.+|+.+++.+ +||||++++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~~iv~~~ 70 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--------------EGAPCTAIREVSLLKDL-KHANIVTLH 70 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--------------CCcchhHHHHHHHHHhC-CCCCcceEE
Confidence 469999999999999999999999999999999865411 11223567899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++..|+||||+++ +|.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 71 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl 145 (309)
T cd07872 71 DIVHTDKSLTLVFEYLDK-DLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKL 145 (309)
T ss_pred EEEeeCCeEEEEEeCCCC-CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEE
Confidence 999999999999999975 888776433 35689999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC--
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-- 330 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 330 (574)
+|||++...... .......+|+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+....+......
T Consensus 146 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 225 (309)
T cd07872 146 ADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPT 225 (309)
T ss_pred CccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999999764322 22334578999999998864 4578999999999999999999999877665554444321100
Q ss_pred -----------------CCC-------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 331 -----------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 331 -----------------~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
++. ...+.+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 226 EETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred HHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 000 11245788999999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-44 Score=363.73 Aligned_cols=250 Identities=27% Similarity=0.470 Sum_probs=208.5
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHH-HHHHhcCCCCcceEEEEEEc
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK-ILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~~hpniv~~~~~~~~ 180 (574)
+.||+|+||.||+|++..+|+.||||++.+.... .......+..|.. +++.+ +||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~ 67 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL------------KKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQT 67 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH------------HhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEc
Confidence 3699999999999999999999999998764211 1122344556655 46667 69999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
.+.+|+||||++||+|...+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~ 142 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGL 142 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCC
Confidence 999999999999999988774 346789999999999999999999999999999999999998 478999999999
Q ss_pred ccccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 261 SDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 261 a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
+.... ........+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+....+..+......++ +.
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~ 218 (321)
T cd05603 143 CKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GG 218 (321)
T ss_pred CccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CC
Confidence 87532 2233345689999999999865 458899999999999999999999998887777777776543332 45
Q ss_pred CCHHHHHHHHHccccCCCCCCCH----HHHhcCcccccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 373 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~----~~~l~hp~~~~~ 373 (574)
.+..+.++|.+||+.+|.+||++ .++++||||...
T Consensus 219 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 219 KTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 78899999999999999999975 599999999753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-45 Score=331.32 Aligned_cols=261 Identities=25% Similarity=0.396 Sum_probs=225.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
..+.+..||.|+.|.||+++.+.+|...|||.+.+.. ..+...++...++++..-.+.|+||+.++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--------------Nkee~kRILmDldvv~~s~dcpyIV~c~G 158 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--------------NKEENKRILMDLDVVLKSHDCPYIVQCFG 158 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--------------CHHHHHHHHHhhhHHhhccCCCeeeeeee
Confidence 4567788999999999999999999999999998752 23456678889998877756899999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+|..+..++|.||.|. +-.+.|+....+++++..+..+...++.||.||-+ ++|||||+||+|||++ +.|++||
T Consensus 159 yFi~n~dV~IcMelMs--~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~GniKl 233 (391)
T KOG0983|consen 159 YFITNTDVFICMELMS--TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGNIKL 233 (391)
T ss_pred EEeeCchHHHHHHHHH--HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc---cCCCEEe
Confidence 9999999999999984 55777777777899999999999999999999986 5899999999999999 6899999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPD 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~~~~ 330 (574)
||||.+..+..+.......|-+.|||||.+.. .|.-++||||||+.|+||.||..||.+. +..+++..+++..++
T Consensus 234 CDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP 313 (391)
T KOG0983|consen 234 CDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP 313 (391)
T ss_pred ecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC
Confidence 99999988877777777899999999999864 4577899999999999999999999874 567788888886553
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
. .+.-..+|+.+++|+..||++|+.+||...++|+|||++.....+
T Consensus 314 ~-L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~ 359 (391)
T KOG0983|consen 314 L-LPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE 359 (391)
T ss_pred C-CCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence 2 222245899999999999999999999999999999999765433
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-44 Score=390.63 Aligned_cols=267 Identities=28% Similarity=0.474 Sum_probs=218.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+.+..+|.+++.||.|+||.||+|.+..++..||+|++..... .......+..|+.+|+.| .|||
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-------------~e~~~~~~~~EI~IL~~L-~HPN 73 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-------------KEREKSQLVIEVNVMREL-KHKN 73 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-------------CHHHHHHHHHHHHHHHHc-CCCC
Confidence 34455789999999999999999999999999999999865321 122446788999999999 5999
Q ss_pred cceEEEEEEc--CCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCEeecCCC
Q 008197 171 VVKFYNAFED--DNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH-------GLVHRDMKP 239 (574)
Q Consensus 171 iv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~-------~iiHrDlkp 239 (574)
||+++++|.. ...+||||||+++|+|.++|... ....+++..++.|+.||+.||.|||+. +||||||||
T Consensus 74 IVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKP 153 (1021)
T PTZ00266 74 IVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP 153 (1021)
T ss_pred cCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcH
Confidence 9999998854 46799999999999999988542 235799999999999999999999985 499999999
Q ss_pred CcEEEccC--------------CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc---CCCCCcchHhHHHHH
Q 008197 240 ENFLFKSA--------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVIT 302 (574)
Q Consensus 240 ~Nill~~~--------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il 302 (574)
+||||+.. +....+||+|||++............+||+.|+|||++.+ .++.++|||||||||
T Consensus 154 eNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~IL 233 (1021)
T PTZ00266 154 QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCII 233 (1021)
T ss_pred HHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHH
Confidence 99999642 1235699999999987654444456689999999999853 357899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 303 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 303 ~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
|+|++|..||........+...+...+. .+.+..+.++.+||..||..+|.+||++.++|.|||++...
T Consensus 234 YELLTGk~PF~~~~~~~qli~~lk~~p~---lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~ 302 (1021)
T PTZ00266 234 YELCSGKTPFHKANNFSQLISELKRGPD---LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302 (1021)
T ss_pred HHHHHCCCCCCcCCcHHHHHHHHhcCCC---CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence 9999999999776554444444443332 22345789999999999999999999999999999998654
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-46 Score=371.85 Aligned_cols=260 Identities=31% Similarity=0.483 Sum_probs=224.5
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.|.|+..||.|+||+||+|.++.++-..|.|+|... .....+.+.-||+||..+ +||+||++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---------------seEELEDylVEIeILa~C-dHP~ivkL 94 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---------------SEEELEDYLVEIEILAEC-DHPVIVKL 94 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---------------chhHHhhhhhhhhhhhcC-CChHHHHH
Confidence 35689999999999999999999999988899988654 235677889999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.|..++.+||+.|||.||-+...++ .-...+++.++..+++|+|.||.|||+++|||||||..|||+. .+|.|+
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaiml-EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdir 170 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIML-ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIR 170 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHH-HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEe
Confidence 999999999999999999998766554 4467899999999999999999999999999999999999999 489999
Q ss_pred EEeeccccccCC-CCCccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||.+..... -.....++|||+|||||+.. .+|..++||||||++|.||..+.+|-...++..++-+|.+.
T Consensus 171 LADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS 250 (1187)
T KOG0579|consen 171 LADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 250 (1187)
T ss_pred eecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc
Confidence 999998865432 23345789999999999864 35688999999999999999999999888888888888776
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.++....+ ..++..+.||+.+||..||..||++.++|+||||+....
T Consensus 251 ePPTLlqP-S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 251 EPPTLLQP-SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred CCCcccCc-chhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 65433222 456789999999999999999999999999999997543
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-44 Score=369.19 Aligned_cols=257 Identities=30% Similarity=0.491 Sum_probs=206.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+|..||||++.... ........+.+|+.+++.+ +||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-------------QNQTHAKRAYRELVLLKCV-NHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-------------cchhHHHHHHHHHHHHHhC-CCCCEee
Confidence 4468999999999999999999999999999999986531 0112345678999999999 5999999
Q ss_pred EEEEEEcCC------EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDN------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++...+ .+|+||||+.+ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~-- 157 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-- 157 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC--
Confidence 999986543 57999999965 5666552 3588999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 158 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~ 236 (359)
T cd07876 158 -SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236 (359)
T ss_pred -CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478999999999986554444456689999999998865 468899999999999999999999987654333222211
Q ss_pred ----------------------CCCCCCCCC-------C---------CCCCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 327 ----------------------NKPDFRRKP-------W---------PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 327 ----------------------~~~~~~~~~-------~---------~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
..+.++... | ...++.+.+||.+||..||.+|||+.++|+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 111111100 0 12356789999999999999999999999999
Q ss_pred cccc
Q 008197 369 WVRE 372 (574)
Q Consensus 369 ~~~~ 372 (574)
||+.
T Consensus 317 ~~~~ 320 (359)
T cd07876 317 YITV 320 (359)
T ss_pred hhhh
Confidence 9985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=377.99 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=201.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-----CCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-----GHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-----~hp 169 (574)
.++|++.+.||+|+||.||+|.+..+++.||||+++... ........|+.+++.+. +|+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----------------~~~~~~~~e~~~l~~l~~~~~~~~~ 191 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----------------KYTRDAKIEIQFMEKVRQADPADRF 191 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----------------hhHHHHHHHHHHHHHHhhcCcccCc
Confidence 468999999999999999999999999999999986431 11234456777777663 345
Q ss_pred CcceEEEEEEcC-CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccC
Q 008197 170 NVVKFYNAFEDD-NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 170 niv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~ 247 (574)
+++.++++|..+ +++|||||++ |++|.+++.. .+.+++..+..++.||+.||.|||+ .|||||||||+|||++..
T Consensus 192 ~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 192 PLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred ceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 689999998764 6899999998 7889888753 3679999999999999999999998 599999999999999852
Q ss_pred C-------------CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCC
Q 008197 248 K-------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFW 313 (574)
Q Consensus 248 ~-------------~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~ 313 (574)
+ +...+||+|||++.... ......+||+.|+|||++.+ .++.++|||||||++|||++|++||.
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 2 11259999999886432 22345689999999998875 46889999999999999999999998
Q ss_pred CCChhHHHHHHHhCCCCCCC----------------------C--------------CCC--CCCHHHHHHHHHccccCC
Q 008197 314 DKTEDGIFKEVLRNKPDFRR----------------------K--------------PWP--SISNSAKDFVKKLLVKDP 355 (574)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~----------------------~--------------~~~--~~~~~~~~li~~~L~~dp 355 (574)
+....+.+..+......++. + .+. ..++.+.+||.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 77655444333221110000 0 000 013457899999999999
Q ss_pred CCCCCHHHHhcCccccccCC
Q 008197 356 RARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 356 ~~Rps~~~~l~hp~~~~~~~ 375 (574)
.+|||+.++|+||||+....
T Consensus 427 ~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 427 QKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred hhCCCHHHHhcCccccccCC
Confidence 99999999999999997543
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=366.61 Aligned_cols=265 Identities=26% Similarity=0.450 Sum_probs=227.4
Q ss_pred CCcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
+-+.++....|.-++.||.|+||-||-|++..+...||||++.-.. .........+..|+..|++|.
T Consensus 18 LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySG------------KQs~EKWqDIlKEVrFL~~l~- 84 (948)
T KOG0577|consen 18 LFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG------------KQSNEKWQDILKEVRFLRQLR- 84 (948)
T ss_pred HHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccc------------cccHHHHHHHHHHHHHHHhcc-
Confidence 3345556677999999999999999999999999999999986542 122344567899999999995
Q ss_pred CCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 168 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
|||+|.+-++|..+...|||||||-| +-.|.+ .....++-+-.|..|+.+.+.||.|||+++.||||||..|||+.
T Consensus 85 HPntieYkgCyLre~TaWLVMEYClG-SAsDll-eVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs-- 160 (948)
T KOG0577|consen 85 HPNTIEYKGCYLREHTAWLVMEYCLG-SASDLL-EVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS-- 160 (948)
T ss_pred CCCcccccceeeccchHHHHHHHHhc-cHHHHH-HHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec--
Confidence 99999999999999999999999965 555544 34457899999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
+.+.|||+|||.|....+. ++++|||+|||||++. |.|+-++|||||||+..||.-.++|++..+....+.-
T Consensus 161 -e~g~VKLaDFGSAsi~~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH 236 (948)
T KOG0577|consen 161 -EPGLVKLADFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 236 (948)
T ss_pred -CCCeeeeccccchhhcCch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH
Confidence 6899999999999876543 4679999999999873 6789999999999999999999999999988887777
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
|..+..+... -+.+|..++.||..||++-|..|||.+++|.|+|+....+
T Consensus 237 IAQNesPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 237 IAQNESPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred HHhcCCCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 7776644322 2457899999999999999999999999999999986543
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=347.29 Aligned_cols=264 Identities=25% Similarity=0.461 Sum_probs=223.5
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+...+.|.++.+||+|+||.||+|.++.+|+.+|||.+... ...+++..|+.||+++ ..|+
T Consensus 28 ~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----------------sDLQEIIKEISIMQQC-~S~y 89 (502)
T KOG0574|consen 28 NKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----------------TDLQEIIKEISIMQQC-KSKY 89 (502)
T ss_pred cCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----------------chHHHHHHHHHHHHHc-CCch
Confidence 344456799999999999999999999999999999988654 3567899999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
+|++|+.|-....+|||||||..|++.+.+. .+..++++.++..+++..+.||+|||...-||||||..|||++ .+
T Consensus 90 VVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R-~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN---T~ 165 (502)
T KOG0574|consen 90 VVKYYGSYFKHSDLWIVMEYCGAGSISDIMR-ARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN---TD 165 (502)
T ss_pred hhhhhhhhccCCceEeehhhcCCCcHHHHHH-HhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc---cc
Confidence 9999999988899999999999999998764 4568899999999999999999999999999999999999998 48
Q ss_pred CCeEEEeeccccccCCC-CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 251 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
|..||+|||.|..+... ...++++|||.|||||++.. .|..++||||||++..||..|++||.+-.+...+..|-...
T Consensus 166 G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~P 245 (502)
T KOG0574|consen 166 GIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKP 245 (502)
T ss_pred chhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCC
Confidence 99999999999776432 33467899999999999865 67899999999999999999999997765543333332222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
++. ......+|.++.+||+.||.+.|++|-||.++++|||+++.....
T Consensus 246 PPT-F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~ 293 (502)
T KOG0574|consen 246 PPT-FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCD 293 (502)
T ss_pred CCC-CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCccc
Confidence 111 111134688999999999999999999999999999999876543
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=358.43 Aligned_cols=257 Identities=28% Similarity=0.485 Sum_probs=203.1
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
...|+++++||+||.++||++... ..+.||+|++... .........+.+|+..|.+|++|.+||++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~-------------~~D~qtl~gy~nEI~lL~KLkg~~~IIqL 425 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLL-------------EADNQTLDGYRNEIALLNKLKGHDKIIQL 425 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHh-------------hcCHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 357999999999999999999853 4456777765432 23345677899999999999999999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
|+|-..++.+|+||||= ..+|-..| .+...-++.-.++.+..|||.|+.++|.+||||.||||.|+|+. .|.+|
T Consensus 426 ~DYEv~d~~lYmvmE~G-d~DL~kiL-~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LK 499 (677)
T KOG0596|consen 426 YDYEVTDGYLYMVMECG-DIDLNKIL-KKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLK 499 (677)
T ss_pred eeeeccCceEEEEeecc-cccHHHHH-HhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEE
Confidence 99999999999999985 34666655 44444445458999999999999999999999999999999998 78999
Q ss_pred EEeeccccccCCCCC---ccccccCccccchHhhhc------------CCCCCcchHhHHHHHHHHHhCCCCCCCCC-hh
Q 008197 255 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKT-ED 318 (574)
Q Consensus 255 l~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~elltg~~Pf~~~~-~~ 318 (574)
|+|||.|..+.+... ....+||+.|||||.+.. +.++++||||||||||+|+.|++||..-. ..
T Consensus 500 LIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~ 579 (677)
T KOG0596|consen 500 LIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI 579 (677)
T ss_pred eeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH
Confidence 999999988765433 346799999999998842 12678999999999999999999995433 22
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.-+..|.........+..+. ..++.++++.||..||.+|||+.++|+|||++-
T Consensus 580 aKl~aI~~P~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 580 AKLHAITDPNHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred HHHHhhcCCCccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 22333333323222222221 234899999999999999999999999999875
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=377.13 Aligned_cols=255 Identities=28% Similarity=0.461 Sum_probs=218.0
Q ss_pred cceeecccccccCCeEEEEEEEcCC-CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ......+.+|+.+|+.+ +|||||++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~---------------~~~~~~~~~E~~~l~~l-~Hpniv~~ 130 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND---------------ERQAAYARSELHCLAAC-DHFGIVKH 130 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC---------------HHHHHHHHHHHHHHHhC-CCCCEeEE
Confidence 4599999999999999999998777 7889999764431 12335677899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++..++.+||||||++||+|.+++... ...++++..+..++.||+.||.|||+++|+||||||+|||++ .++.
T Consensus 131 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~ 207 (478)
T PTZ00267 131 FDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGI 207 (478)
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCc
Confidence 99999999999999999999999877432 345789999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCC---CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..+..+.
T Consensus 208 ~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~ 287 (478)
T PTZ00267 208 IKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK 287 (478)
T ss_pred EEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 9999999998764332 23456799999999998654 6889999999999999999999998888878888877654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
... ....+++++.+||.+||..+|.+||++.+++.|||++.
T Consensus 288 ~~~---~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 288 YDP---FPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred CCC---CCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 321 12357899999999999999999999999999999975
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=376.50 Aligned_cols=261 Identities=26% Similarity=0.458 Sum_probs=219.8
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
...++|.+.+.||+|+||.||+|++..+|+.||||++..... .......+.+|+.++..+ +|+||+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-------------~~~~~~~~~~Ei~~l~~~-~h~~iv 94 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-------------SEADKNRAQAEVCCLLNC-DFFSIV 94 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-------------CHHHHHHHHHHHHHHhcC-CCCcEE
Confidence 345689999999999999999999999999999999865421 123345678999999999 599999
Q ss_pred eEEEEEEcCC--------EEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 173 KFYNAFEDDN--------YVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 173 ~~~~~~~~~~--------~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
++++.+.... .+++||||+++|+|.+.+... ....+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NI 174 (496)
T PTZ00283 95 KCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANI 174 (496)
T ss_pred EeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHE
Confidence 9988775432 478999999999999988543 235789999999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCC---CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChh
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED 318 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~ 318 (574)
|++ .++.+||+|||+++..... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..
T Consensus 175 Ll~---~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~ 251 (496)
T PTZ00283 175 LLC---SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME 251 (496)
T ss_pred EEe---CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 998 4789999999999765432 223456899999999998754 688999999999999999999999988877
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
..+..+..+.... ..+.+++++.++|.+||..||.+||++.++++|||++..
T Consensus 252 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~ 303 (496)
T PTZ00283 252 EVMHKTLAGRYDP---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF 303 (496)
T ss_pred HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence 7777777654322 225688999999999999999999999999999998753
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=364.80 Aligned_cols=257 Identities=28% Similarity=0.424 Sum_probs=209.1
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.+ +||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-------------QNQTHAKRAYRELVLMKCV-NHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-------------cCchhHHHHHHHHHHHHhc-CCCCccc
Confidence 3468999999999999999999999999999999986531 1122345678899999999 5999999
Q ss_pred EEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++... ..+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-- 160 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-- 160 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC--
Confidence 99988643 468999999965 6776652 3488999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..++.
T Consensus 161 -~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~ 239 (364)
T cd07875 161 -SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 239 (364)
T ss_pred -CCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478999999999987655444456789999999998865 458899999999999999999999988776665555543
Q ss_pred CCC----------------------CCCCC----------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 327 NKP----------------------DFRRK----------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 327 ~~~----------------------~~~~~----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
... .+... .....+..+++||.+||..||.+|||+.++|+||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 211 00000 0011345789999999999999999999999999
Q ss_pred cccc
Q 008197 369 WVRE 372 (574)
Q Consensus 369 ~~~~ 372 (574)
||..
T Consensus 320 ~~~~ 323 (364)
T cd07875 320 YINV 323 (364)
T ss_pred cccc
Confidence 9975
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=358.81 Aligned_cols=256 Identities=26% Similarity=0.409 Sum_probs=209.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||.|+||.||+|.+..+|..+|+|.+.... .....+.+.+|+++++.+ +||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--------------KPAIRNQIIRELQVLHEC-NSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--------------CHHHHHHHHHHHHHHHHC-CCCcccce
Confidence 357999999999999999999999999999999886531 122345788999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCCe
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++|.+.+.+|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~ 143 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEI 143 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCE
Confidence 9999999999999999999999998843 45689999999999999999999985 799999999999998 46789
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH--------
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-------- 324 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i-------- 324 (574)
||+|||++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+
T Consensus 144 kL~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (333)
T cd06650 144 KLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDP 222 (333)
T ss_pred EEeeCCcchhhhhh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCc
Confidence 99999998765322 22345799999999998754 578899999999999999999999755432221111
Q ss_pred ------------------------------------HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 325 ------------------------------------LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 325 ------------------------------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
..... +......++.++.+||.+||+.||.+|||+.+++.||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~ 300 (333)
T cd06650 223 AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA 300 (333)
T ss_pred cccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence 00000 0000113567899999999999999999999999999
Q ss_pred ccccc
Q 008197 369 WVREG 373 (574)
Q Consensus 369 ~~~~~ 373 (574)
||+..
T Consensus 301 ~~~~~ 305 (333)
T cd06650 301 FIKRS 305 (333)
T ss_pred HHhcC
Confidence 99864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=366.79 Aligned_cols=257 Identities=29% Similarity=0.455 Sum_probs=209.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-------------QNLVSCKRVFRELKMLCFF-KHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-------------cchHHHHHHHHHHHHHHhC-CCCCcCCHhh
Confidence 3788999999999999999999999999999886431 0112345688999999999 5999999999
Q ss_pred EEEcCC-----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 177 AFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 177 ~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++...+ .+|+||||+. ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~---~~~ 140 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNC 140 (372)
T ss_pred eecCCCccccceEEEEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---CCC
Confidence 998776 8999999996 57877763 346799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCC--CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 252 SLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.+||+|||++....... ......+|+.|+|||++.+. ++.++|||||||++|+|++|++||.+.+....+..+...
T Consensus 141 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~ 220 (372)
T cd07853 141 VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDL 220 (372)
T ss_pred CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 99999999997653322 23345789999999998753 578899999999999999999999887665544443321
Q ss_pred -----------------------CCCCCC-----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 328 -----------------------KPDFRR-----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 328 -----------------------~~~~~~-----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
....+. ...+..++++.+||.+||+.||.+|||+.++|.||||+..
T Consensus 221 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 221 LGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred cCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 100000 1123467889999999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-44 Score=351.68 Aligned_cols=254 Identities=41% Similarity=0.696 Sum_probs=210.2
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++++.||+|+||.||++.+..+++.||+|++...... ........+|+.+++++ .||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~-------------~~~~~~~~~e~~~~~~l-~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIE-------------EEEREENIREIKILRRL-RHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHH-------------HHHHHHHHHHHHHHHHH-TBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccc-------------ccccchhhhhhhccccc-ccccccccccc
Confidence 78999999999999999999999999999999875321 11222345699999999 69999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+......++||||+++++|.+++. ....+++..+..++.||+.||.+||++||+|+||||+||+++ .++.++|+|
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~D 141 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLID 141 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESS
T ss_pred cccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc---ccccccccc
Confidence 999999999999999999999885 346789999999999999999999999999999999999999 578999999
Q ss_pred ecccccc-CCCCCccccccCccccchHhhh--cCCCCCcchHhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhCCCCC
Q 008197 258 FGLSDFI-KPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDF 331 (574)
Q Consensus 258 FG~a~~~-~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~~~---~~~~~~~i~~~~~~~ 331 (574)
||.+... ..........+|+.|+|||++. ...+.++||||||+++|+|++|..||.... ...............
T Consensus 142 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PF00069_consen 142 FGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS 221 (260)
T ss_dssp GTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 9999763 3334455678999999999987 455889999999999999999999998773 223333333222111
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....+...+..+.++|.+||+.||++|||+.++++||||
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 222 SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 111112234789999999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=348.27 Aligned_cols=256 Identities=28% Similarity=0.501 Sum_probs=212.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+.|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+.+||||++
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----------------~~~~~~~~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----------------DEEEEIKQEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----------------ccHHHHHHHHHHHHHhcCCCCeee
Confidence 4567999999999999999999999999999999986531 123567899999999867999999
Q ss_pred EEEEEEc------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++.. ...+|+||||+++++|.+++.......+++..+..++.|++.||.|||+++|+||||||+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~-- 145 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT-- 145 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC--
Confidence 9999875 35689999999999999988655556799999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCC-CCccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 248 KEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.+||+|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|..||........
T Consensus 146 -~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~ 224 (272)
T cd06637 146 -ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA 224 (272)
T ss_pred -CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 4788999999999765432 22345679999999998852 357789999999999999999999976655444
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...+.... ........++..+.+||.+||..+|.+|||+.+++.||||
T Consensus 225 ~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 225 LFLIPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHhcCC--CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 44333221 1222234578899999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=363.64 Aligned_cols=258 Identities=28% Similarity=0.444 Sum_probs=207.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+++.+ +||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-------------QNQTHAKRAYRELVLMKCV-NHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-------------cChHHHHHHHHHHHHHHHh-CCCchhc
Confidence 4468999999999999999999999999999999986531 1122345677899999999 5999999
Q ss_pred EEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++... ..+|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~-- 153 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-- 153 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC--
Confidence 99998643 357999999965 6666552 3588999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||+++............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..++.
T Consensus 154 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (355)
T cd07874 154 -SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232 (355)
T ss_pred -CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478999999999987655544556789999999998865 458899999999999999999999987665444333222
Q ss_pred C----------------------CCCCCC----------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 327 N----------------------KPDFRR----------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 327 ~----------------------~~~~~~----------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
. .+.+.. ......+..+.+||.+||..||++|||+.++|+||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 1 111000 00112356789999999999999999999999999
Q ss_pred ccccc
Q 008197 369 WVREG 373 (574)
Q Consensus 369 ~~~~~ 373 (574)
||...
T Consensus 313 ~~~~~ 317 (355)
T cd07874 313 YINVW 317 (355)
T ss_pred chhcc
Confidence 99743
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=363.75 Aligned_cols=259 Identities=28% Similarity=0.469 Sum_probs=209.0
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.+++.||.|+||.||+|.+..+++.||||++..... .......+.+|+.+++.+ +||||++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~ 78 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-------------SLIHARRTYRELRLLKHM-KHENVIG 78 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-------------hhHHHHHHHHHHHHHHhc-CCCchhh
Confidence 34689999999999999999999999999999999865311 112345577899999999 5999999
Q ss_pred EEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++... ..+|++++++ +++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~-- 152 (343)
T cd07878 79 LLDVFTPATSIENFNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN-- 152 (343)
T ss_pred hhhhhcccccccccCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC--
Confidence 99988543 4579999998 778877652 35699999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+.
T Consensus 153 -~~~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 229 (343)
T cd07878 153 -EDCELRILDFGLARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIM 229 (343)
T ss_pred -CCCCEEEcCCccceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 478999999999986543 2345689999999999865 46889999999999999999999997765544443332
Q ss_pred hCCC-----------------------CCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 326 RNKP-----------------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 326 ~~~~-----------------------~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.... ..+.. .+...++.+.+||.+||..||.+|||+.++|.||||.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 230 EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 2110 00000 12345677899999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=353.34 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=211.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.+ +||||++++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~nI~~~~ 70 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--------------EGAPCTAIREVSLLKDL-KHANIVTLH 70 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--------------cCchhHHHHHHHHHHhc-CCCCcceEE
Confidence 469999999999999999999999999999999865311 11234567899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++.+++||||++ ++|.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 71 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl 145 (301)
T cd07873 71 DIIHTEKSLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKL 145 (301)
T ss_pred EEEecCCeEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEE
Confidence 99999999999999996 5888877443 45689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC-
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF- 331 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~- 331 (574)
+|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|++||...+..+....+.......
T Consensus 146 ~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 225 (301)
T cd07873 146 ADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPT 225 (301)
T ss_pred CcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence 999998754322 223345789999999988653 5778999999999999999999998776655544433211100
Q ss_pred ------------------C-------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 ------------------R-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ------------------~-------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+ ....+.+++.+.+||.+||+.||.+|||+.++++||||+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 226 EETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred hhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0 001235788899999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=357.87 Aligned_cols=251 Identities=28% Similarity=0.427 Sum_probs=193.5
Q ss_pred cccccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 101 GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+++||+|+||.||+|+++ .+++.||+|.+.... ....+.+|+.+|+.+ +||||+++++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----------------~~~~~~~E~~~l~~l-~h~niv~~~~~~ 67 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----------------ISMSACREIALLREL-KHPNVISLQKVF 67 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----------------CcHHHHHHHHHHHhc-CCCCCcceeeeE
Confidence 468999999999999865 467899999886531 123467899999999 599999999998
Q ss_pred Ec--CCEEEEEEeccCCCchHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC-C
Q 008197 179 ED--DNYVYIAMELCEGGELLDRILAK-------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-K 248 (574)
Q Consensus 179 ~~--~~~~~lv~e~~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~-~ 248 (574)
.. +..+|+||||+. ++|.+.+... ....+++..++.++.||+.||.|||++||+||||||+|||+... .
T Consensus 68 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~ 146 (317)
T cd07868 68 LSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP 146 (317)
T ss_pred ecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCC
Confidence 54 567899999995 5887776422 12358999999999999999999999999999999999999532 2
Q ss_pred CCCCeEEEeeccccccCCCC----CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----
Q 008197 249 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---- 318 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~---- 318 (574)
..+.+||+|||+|....... .....+||+.|+|||++.+ .++.++||||+||++|+|++|++||......
T Consensus 147 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~ 226 (317)
T cd07868 147 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 226 (317)
T ss_pred CcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCccccccc
Confidence 46789999999998654321 2345689999999998865 3588999999999999999999999643321
Q ss_pred -----HHHHHHHhCCCC---------------------CCC-------------CCCCCCCHHHHHHHHHccccCCCCCC
Q 008197 319 -----GIFKEVLRNKPD---------------------FRR-------------KPWPSISNSAKDFVKKLLVKDPRARL 359 (574)
Q Consensus 319 -----~~~~~i~~~~~~---------------------~~~-------------~~~~~~~~~~~~li~~~L~~dp~~Rp 359 (574)
..+..+...... +.. ......+..+.+||.+||+.||.+||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 306 (317)
T cd07868 227 NPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRI 306 (317)
T ss_pred ccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCC
Confidence 111222110000 000 00012345688999999999999999
Q ss_pred CHHHHhcCccc
Q 008197 360 TAAQALSHPWV 370 (574)
Q Consensus 360 s~~~~l~hp~~ 370 (574)
|++++|+||||
T Consensus 307 t~~e~l~hp~f 317 (317)
T cd07868 307 TSEQAMQDPYF 317 (317)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-44 Score=349.37 Aligned_cols=258 Identities=28% Similarity=0.486 Sum_probs=225.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|+.-++||+|+||.||-++-+.||+-+|+|.+.+..+..+. ...-..+|-.||..+ +.|.||.+-
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~------------ge~maLnEk~iL~kV-~s~FiVsla 251 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRK------------GETMALNEKQILEKV-SSPFIVSLA 251 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhh------------hhHHhhHHHHHHHHh-ccCcEEEEe
Confidence 4688889999999999999999999999999999887654432 234467899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
-+|++.+.+|+|+..|.||+|.-+|.......|++..++.++.+|+.||++||+.+||+|||||+||||| +.|+|+|
T Consensus 252 YAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~GhvRI 328 (591)
T KOG0986|consen 252 YAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGHVRI 328 (591)
T ss_pred eeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCCeEe
Confidence 9999999999999999999998887665556899999999999999999999999999999999999999 6899999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----HHHHHHHhCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPD 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~----~~~~~i~~~~~~ 330 (574)
+|+|+|..+..+......+||.+|||||++.+ .|+...|+|||||+||||+.|+.||....+. ++-+.++.....
T Consensus 329 SDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~e 408 (591)
T KOG0986|consen 329 SDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEE 408 (591)
T ss_pred eccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhh
Confidence 99999999988888888899999999999864 5788999999999999999999999665432 344445544444
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
++ ..+|+++++|++.+|++||.+|. +++++.+||||+..
T Consensus 409 y~----~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 409 YS----DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred cc----cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 43 56899999999999999999998 47799999999973
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=347.11 Aligned_cols=253 Identities=34% Similarity=0.580 Sum_probs=218.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+.+|+.+++++ +||||+++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 68 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI------------VKLKQVEHVLNEKRILQSI-RHPFLVNLYG 68 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh------------hhhhHHHHHHHHHHHHHhC-CCCCccceee
Confidence 68999999999999999999999999999999875421 1122346788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+.+|+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+||||+|+|||++ .++.+||+
T Consensus 69 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~ 143 (290)
T cd05580 69 SFQDDSNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKIT 143 (290)
T ss_pred EEEcCCeEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEe
Confidence 99999999999999999999998844 36799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
|||++...... ....+|++.|+|||.+.+. .+.++||||||+++|+|++|..||...........+..+...++
T Consensus 144 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--- 218 (290)
T cd05580 144 DFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP--- 218 (290)
T ss_pred eCCCccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC---
Confidence 99999876543 3455799999999987654 57889999999999999999999988776666777765544332
Q ss_pred CCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 336 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 336 ~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
..++..+.++|.+||..+|.+|+ ++.++++||||+..
T Consensus 219 -~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 219 -SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred -ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 34688999999999999999999 99999999999764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=357.82 Aligned_cols=252 Identities=26% Similarity=0.371 Sum_probs=201.8
Q ss_pred cceeecccccccCCeEEEEEEE-----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++.+.||.|+||.||+|.+ ..++..||||++.... .......+.+|+.++..+.+|||
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h~n 72 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--------------TASEHKALMSELKILIHIGNHLN 72 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--------------chHHHHHHHHHHHHHHHhccCcc
Confidence 5799999999999999999975 2345789999986531 11234568899999999966999
Q ss_pred cceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhc---------------------------------------------
Q 008197 171 VVKFYNAFED-DNYVYIAMELCEGGELLDRILAKK--------------------------------------------- 204 (574)
Q Consensus 171 iv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~--------------------------------------------- 204 (574)
|+++++++.. .+.+++||||+++|+|.+++....
T Consensus 73 iv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (338)
T cd05102 73 VVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPS 152 (338)
T ss_pred eeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccc
Confidence 9999998876 456899999999999999885421
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC
Q 008197 205 ---------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269 (574)
Q Consensus 205 ---------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~ 269 (574)
..++++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+|||+++.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~ 229 (338)
T cd05102 153 TSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPD 229 (338)
T ss_pred cCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcc
Confidence 13478889999999999999999999999999999999998 478899999999976533221
Q ss_pred ---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHH
Q 008197 270 ---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 344 (574)
Q Consensus 270 ---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 344 (574)
.....+++.|+|||++.+ .++.++|||||||++|||++ |..||.+......+...+....... .....++.+.
T Consensus 230 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ 307 (338)
T cd05102 230 YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR--APENATPEIY 307 (338)
T ss_pred hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC--CCCCCCHHHH
Confidence 123456788999998764 46899999999999999997 9999987655444444433332222 1245788999
Q ss_pred HHHHHccccCCCCCCCHHHHhc
Q 008197 345 DFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 345 ~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+|+.+||..||.+|||+.++++
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHH
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=342.22 Aligned_cols=257 Identities=28% Similarity=0.469 Sum_probs=213.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|.+.+.||.|++|.||+|.+..+++.||+|.+...... .........+.+|+.+++++ +||||++++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~----------~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~ 70 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDS----------PETKKEVNALECEIQLLKNL-QHERIVQYY 70 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccc----------hhhHHHHHHHHHHHHHHHhC-CCCCeeeeE
Confidence 3589999999999999999999999999999998754211 00112345688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..+..+++|+||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++ .++.++|
T Consensus 71 ~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l 145 (263)
T cd06625 71 GCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKL 145 (263)
T ss_pred EEEccCCeEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEE
Confidence 999999999999999999999988743 35689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC----ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 256 TDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+|||++........ .....|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 146 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 225 (263)
T cd06625 146 GDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN 225 (263)
T ss_pred eecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC
Confidence 99999876533211 1335688999999988654 578999999999999999999999876655555444433222
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
......++..+.++|.+||..+|.+|||+.++++||||
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 226 --PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred --CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 11224578899999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=346.36 Aligned_cols=256 Identities=26% Similarity=0.414 Sum_probs=207.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||.|+||.||+|++..+|..||||++.... ........+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES-------------EEEGVPSTAIREISLLKEL-QHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc-------------ccCCchHHHHHHHHHHHhc-CCCCEeeeEE
Confidence 4889999999999999999999999999999986531 0112335678899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++.+++.+|+||||++ ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||
T Consensus 67 ~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l 142 (285)
T cd07861 67 VLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKL 142 (285)
T ss_pred EEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEE
Confidence 9999999999999997 58888775433 25789999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC-
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF- 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~- 331 (574)
+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|++|++||.+.........+.......
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~ 222 (285)
T cd07861 143 ADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPT 222 (285)
T ss_pred CcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999987553222 22344678999999988643 4788999999999999999999998765443332222111000
Q ss_pred ------------------------CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 332 ------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 332 ------------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....+..+++++.+||.+||..||.+|||+.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 223 EDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 001124578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=350.33 Aligned_cols=259 Identities=33% Similarity=0.587 Sum_probs=219.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..+++.||||.+.+.... .......+..|+.+++.+ +||||+++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 68 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI------------KRNKVKRVLTEQEILATL-DHPFLPTLYA 68 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc------------hHHHHHHHHHHHHHHHhC-CCCCchhhee
Confidence 699999999999999999999999999999998764211 012345688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+...+..|+||||+.|++|.+.+.......+++..+..++.||+.||.|||+.|++||||||+||+++ .++.++|+
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~ 145 (316)
T cd05574 69 SFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLS 145 (316)
T ss_pred eeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEe
Confidence 999999999999999999999988655557799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC------------------------------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHH
Q 008197 257 DFGLSDFIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYIL 305 (574)
Q Consensus 257 DFG~a~~~~~~~------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~el 305 (574)
|||++....... .....+||..|+|||++.+. ++.++|||||||++|+|
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l 225 (316)
T cd05574 146 DFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEM 225 (316)
T ss_pred ecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHH
Confidence 999986543211 11234789999999988654 57889999999999999
Q ss_pred HhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC----HHHHhcCcccccc
Q 008197 306 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT----AAQALSHPWVREG 373 (574)
Q Consensus 306 ltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~~~l~hp~~~~~ 373 (574)
++|..||.+......+..+......++. ...+++.+.++|.+||..+|++||| +.+++.||||+..
T Consensus 226 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 226 LYGTTPFKGSNRDETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred hhCCCCCCCCchHHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 9999999888877777777655443332 2237899999999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-43 Score=362.85 Aligned_cols=253 Identities=22% Similarity=0.371 Sum_probs=204.3
Q ss_pred cccceeecccccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+..+|.+++.||.|+||.||+|... .++..||+|.+... ....+|+.+|+.| +||||
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------------------~~~~~E~~il~~l-~h~~i 148 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------------------KTPGREIDILKTI-SHRAI 148 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------------------ccHHHHHHHHHhc-CCCCc
Confidence 4568999999999999999999754 35678999987643 1245899999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.....+|+|||++. ++|.+++ .....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 149 v~~~~~~~~~~~~~lv~e~~~-~~l~~~l--~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~ 222 (392)
T PHA03207 149 INLIHAYRWKSTVCMVMPKYK-CDLFTYV--DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPE 222 (392)
T ss_pred cceeeeEeeCCEEEEEehhcC-CCHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCC
Confidence 999999999999999999995 6888877 3456799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh---HHHHHH
Q 008197 252 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~---~~~~~i 324 (574)
.+||+|||++........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... ..+..+
T Consensus 223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i 302 (392)
T PHA03207 223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI 302 (392)
T ss_pred CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence 999999999976543322 235689999999999875 4688999999999999999999999765422 222222
Q ss_pred HhCC----CCCC------------------CCC--C------CCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 325 LRNK----PDFR------------------RKP--W------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 325 ~~~~----~~~~------------------~~~--~------~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+... ..++ .+. + ..++.++.+||.+||..||++|||+.++|.||||+..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 303 IRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred HHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence 2110 0000 000 0 1346678999999999999999999999999999864
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=352.71 Aligned_cols=257 Identities=22% Similarity=0.306 Sum_probs=204.7
Q ss_pred eccccccc--CCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 100 IGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 100 ~~~~lG~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
++++||+| +|++||++.++.+|+.||||.+..... .....+.+.+|+.+++.+ +||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-------------TNEMVTFLQGELHVSKLF-NHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-------------cHHHHHHHHHHHHHHHhc-CCCCeeeEEEE
Confidence 56789999 789999999999999999999865411 112345677899999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
|..++..|+||||+++|+|.+++.......+++..+..++.||+.||.|||+++|+||||||+|||++ .++.++++|
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~ 144 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSG 144 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcc
Confidence 99999999999999999999988654455689999999999999999999999999999999999998 467899999
Q ss_pred eccccccCCC-C-------CccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 258 FGLSDFIKPG-K-------KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 258 FG~a~~~~~~-~-------~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
||.+...... . ......++..|+|||++.+ .++.++|||||||++|+|++|+.||..............
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 224 (327)
T cd08227 145 LRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN 224 (327)
T ss_pred cchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc
Confidence 9865432111 0 1122357788999999864 367899999999999999999999976554443333322
Q ss_pred CCCCCC------------------------------------------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHH
Q 008197 327 NKPDFR------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 364 (574)
Q Consensus 327 ~~~~~~------------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~ 364 (574)
+..... .+....+++.+.+||.+||+.||.+|||++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~el 304 (327)
T cd08227 225 GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTL 304 (327)
T ss_pred CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHH
Confidence 211000 00011346789999999999999999999999
Q ss_pred hcCcccccc
Q 008197 365 LSHPWVREG 373 (574)
Q Consensus 365 l~hp~~~~~ 373 (574)
++||||+..
T Consensus 305 l~~p~f~~~ 313 (327)
T cd08227 305 LNHSFFKQI 313 (327)
T ss_pred hcChhhhhc
Confidence 999999864
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-43 Score=360.05 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=200.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|++++.||.|+||.||+|++..++..||+|+..+. ....|+.+++.+ +||||++++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------------------~~~~E~~~l~~l-~h~~iv~~~ 123 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------------------TTLIEAMLLQNV-NHPSVIRMK 123 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------------------ccHHHHHHHHhC-CCCCCcChh
Confidence 3699999999999999999999999999999975443 134689999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+..++||||+. ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ ..+.+||
T Consensus 124 ~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kl 198 (357)
T PHA03209 124 DTLVSGAITCMVLPHYS-SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQVCI 198 (357)
T ss_pred heEEeCCeeEEEEEccC-CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEE
Confidence 99999999999999995 688887754 346799999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----------HHHHHH
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----------GIFKEV 324 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~----------~~~~~i 324 (574)
+|||++.............||+.|+|||++.+ .++.++|||||||++|||+++..|+...... ..+..+
T Consensus 199 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~ 278 (357)
T PHA03209 199 GDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKI 278 (357)
T ss_pred ecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHH
Confidence 99999976544444456789999999998764 5688999999999999999865554332111 111111
Q ss_pred HhCC----CCCCC------------------C--------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 325 LRNK----PDFRR------------------K--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 325 ~~~~----~~~~~------------------~--------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
+... ..++. . ....++.++.+||.+||+.||.+|||+.++|+||||+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 279 ISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 1110 00110 0 01245677888999999999999999999999999985
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=344.56 Aligned_cols=256 Identities=28% Similarity=0.506 Sum_probs=212.1
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+.+||||++
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----------------~~~~~~~~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----------------DEEEEIKLEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----------------HHHHHHHHHHHHHHHhcCCCcEEE
Confidence 4468999999999999999999999999999999886531 233567889999999977999999
Q ss_pred EEEEEE------cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFE------DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~------~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++. ....+|+||||+++|+|.+++.......+++..+..++.||+.||.|||+.||+||||+|+||+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~-- 155 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT-- 155 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--
Confidence 999985 356899999999999999988665566789999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCC-CCccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 248 KEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.++|+|||++...... .......|++.|+|||++. ..++.++|||||||++|+|++|..||........
T Consensus 156 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~ 234 (282)
T cd06636 156 -ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA 234 (282)
T ss_pred -CCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence 4778999999998765422 2234567999999999874 2357789999999999999999999977655444
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...+..... .......++.++.+||.+||..||.+|||+.++++||||
T Consensus 235 ~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 235 LFLIPRNPP--PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hhhHhhCCC--CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 433332211 111223578899999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=335.85 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=217.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.+.+.||+|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-------------NRREREEAIDEARVLAKL-DSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-------------CHHHHHHHHHHHHHHHhc-CCCCeehhee
Confidence 37888999999999999999999999999999865311 123456788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+.+|+||||++|++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~ 143 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIG 143 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEc
Confidence 999999999999999999999988665556799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++........ .....|++.|+|||++.+. ++.++|||||||++|+|++|+.||...........+..+.....
T Consensus 144 df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 221 (256)
T cd08529 144 DLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPV-- 221 (256)
T ss_pred ccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 9999886654332 2345789999999988654 57899999999999999999999988877666666665432211
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...++..+.++|.+||+.+|++||++.+++.|||+
T Consensus 222 -~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 222 -SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred -ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 12577899999999999999999999999999995
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-42 Score=335.70 Aligned_cols=254 Identities=22% Similarity=0.470 Sum_probs=214.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||.|++|.||++.+..+++.||+|.+..... .....+.+.+|+.+++.+ +|||++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-------------SRRERKAAEQEAQLLSQL-KHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-------------CHHHHHHHHHHHHHHHhC-CCCCeeeeee
Confidence 48999999999999999999999999999999865311 122345678899999999 5999999999
Q ss_pred EEEc-CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
.+.. ...+|+||||+++++|.+++.......+++..+..++.|++.||.+||+.||+||||||+||+++ .++.++|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l 143 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKV 143 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEE
Confidence 8864 55789999999999999988765556799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++...... .......|++.|+|||++.+. ++.++|||||||++|+|++|+.||...+.......+..+...
T Consensus 144 ~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--- 220 (257)
T cd08223 144 GDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP--- 220 (257)
T ss_pred ecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC---
Confidence 999999765432 223345789999999987654 578899999999999999999999877766666666554331
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.....+++.+.+||.+||..+|.+|||+.+++.||||
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1224578999999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=340.84 Aligned_cols=253 Identities=28% Similarity=0.462 Sum_probs=208.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.+++.+ +||||++++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~e~~~~~~l-~h~~ii~~~ 72 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---------------GEDFAVVQQEIIMMKDC-KHSNIVAYF 72 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---------------hhHHHHHHHHHHHHHhC-CCCCeeeEE
Confidence 47999999999999999999999999999999986541 11234577899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+.+...+.+|+||||+++++|.+++. ..+.+++..+..++.|++.||.|||++||+|+||||+||+++ .++.+||
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l 147 (267)
T cd06645 73 GSYLRRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKL 147 (267)
T ss_pred EEEEeCCEEEEEEeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEE
Confidence 99999999999999999999999774 345799999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+|||++...... .......||+.|+|||++. +.++.++|||||||++|+|++|..||..................
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd06645 148 ADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ 227 (267)
T ss_pred CcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCC
Confidence 999998755322 2223457999999999873 34678999999999999999999999766544433333322221
Q ss_pred CCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 331 FRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 331 ~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
.+. .....++..+.+||.+||..+|++|||+.++++|||
T Consensus 228 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 228 PPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 111 111246788999999999999999999999999999
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-42 Score=346.06 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=209.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||++.+..+|..+|+|.+.... .......+.+|+++++++ +||||+++++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 66 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--------------KPAIRNQIIRELKVLHEC-NSPYIVGFYG 66 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--------------CHHHHHHHHHHHHHHHhC-CCCCCCeEEE
Confidence 5899999999999999999999999999999886431 112345688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++.+++.+|+||||++|++|.+++.. ...+++..+..++.||+.||.|||+ .+++||||||+|||++ .++.+||
T Consensus 67 ~~~~~~~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l 141 (308)
T cd06615 67 AFYSDGEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKL 141 (308)
T ss_pred EEeeCCEEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEE
Confidence 99999999999999999999998843 3678999999999999999999998 6999999999999998 4778999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC----
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD---- 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~---- 330 (574)
+|||++...... .....+|++.|+|||++.+. ++.++|||||||++|+|++|+.||...+.......+......
T Consensus 142 ~dfg~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 220 (308)
T cd06615 142 CDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAK 220 (308)
T ss_pred ccCCCccccccc-ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcccccccc
Confidence 999998765332 22456899999999988654 578899999999999999999999755433322211110000
Q ss_pred ------------------------------CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 ------------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ------------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.+..+...++.++.+||.+||..+|++|||+.++++||||...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 221 ESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0011112367789999999999999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=358.44 Aligned_cols=260 Identities=25% Similarity=0.448 Sum_probs=222.5
Q ss_pred cce-eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 96 ~~y-~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+| +....||+|+|-+||+|.|..+|..||.-.++.... .-.+...+++..|+.+|+.| +|||||++
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~-----------~q~~~~leR~~~Ev~lLKsL-~H~NIirf 106 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDV-----------TQSPEELERLYSEVHLLKSL-KHPNIIRF 106 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHh-----------hcChHHHHHHHHHHHHHccC-CCCceeee
Confidence 455 456789999999999999999999998766544321 11234568999999999999 59999999
Q ss_pred EEEEEcCC--EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--CCEeecCCCCcEEEccCCCC
Q 008197 175 YNAFEDDN--YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 175 ~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--~iiHrDlkp~Nill~~~~~~ 250 (574)
|.+|.+.. .+.+|+|++..|+|..++ ++.+.++...++.|++||+.||.|||++ .|||||||.+||+|+. ..
T Consensus 107 y~SW~d~~n~~in~iTEL~TSGtLr~Y~--kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG--~~ 182 (632)
T KOG0584|consen 107 YDSWVDTDNKTINFITELFTSGTLREYR--KKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG--NL 182 (632)
T ss_pred eeheecCCCceeeeeeecccCCcHHHHH--HHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC--Cc
Confidence 99998754 589999999999999988 4557889999999999999999999998 5999999999999985 68
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCC-CCChhHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKP 329 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~-~~~~~~~~~~i~~~~~ 329 (574)
|.|||+|+|||........ ..++|||.|||||+....|...+||||||+++.||+|+..||. ..+...+|+++..+..
T Consensus 183 G~VKIGDLGLAtl~r~s~a-ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK 261 (632)
T KOG0584|consen 183 GEVKIGDLGLATLLRKSHA-KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK 261 (632)
T ss_pred CceeecchhHHHHhhcccc-ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC
Confidence 9999999999988765443 3489999999999999999999999999999999999999995 4677889999998875
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+-..... -.+++++||.+||.. ...|||+.++|.||||.....
T Consensus 262 P~sl~kV--~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 262 PAALSKV--KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred HHHhhcc--CCHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence 4332222 257899999999999 999999999999999998644
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=362.41 Aligned_cols=251 Identities=22% Similarity=0.341 Sum_probs=202.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
...|.+.+.||+|+||.||+|.+..+++.||||.... ..+.+|+.+|++| +|||||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------------------~~~~~E~~iL~~L-~HpnIv~l 225 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------------------ASSVHEARLLRRL-SHPAVLAL 225 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------------------cCHHHHHHHHHHC-CCCCCCcE
Confidence 3479999999999999999999999999999995422 2346899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++...+..++|||++. ++|.+++... ...+++..+..++.||+.||.|||++|||||||||+|||++ .++.+|
T Consensus 226 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vk 300 (461)
T PHA03211 226 LDVRVVGGLTCLVLPKYR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDIC 300 (461)
T ss_pred EEEEEECCEEEEEEEccC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEE
Confidence 999999999999999994 6888877543 35799999999999999999999999999999999999998 478899
Q ss_pred EEeeccccccCCCC---CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC--------hhHHHH
Q 008197 255 ATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT--------EDGIFK 322 (574)
Q Consensus 255 l~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~--------~~~~~~ 322 (574)
|+|||+++...... .....+||+.|+|||++.+. ++.++|||||||+||||++|..|+.... ...+..
T Consensus 301 L~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~ 380 (461)
T PHA03211 301 LGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILR 380 (461)
T ss_pred EcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHH
Confidence 99999998654322 12346799999999998654 6889999999999999999887764432 112222
Q ss_pred HHHhCCC---CC------------------------CCCCCC---CCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 323 EVLRNKP---DF------------------------RRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 323 ~i~~~~~---~~------------------------~~~~~~---~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.+..... .+ ....|. .++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 381 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 381 IIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 2222110 01 111122 35668999999999999999999999999999974
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=341.30 Aligned_cols=266 Identities=29% Similarity=0.412 Sum_probs=217.9
Q ss_pred CcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 89 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
...+.+..+|.+..++|+|+||+|-.+.+..++..||||+++.- ....+...-|+++|+++..+
T Consensus 82 ~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----------------~kYreAa~iEi~vLqki~~~ 145 (415)
T KOG0671|consen 82 QVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----------------DKYREAALIEIEVLQKINES 145 (415)
T ss_pred EeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----------------HHHhhHHHHHHHHHHHHHhc
Confidence 34566789999999999999999999999999999999998653 24566778899999999433
Q ss_pred -C----CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 169 -E----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 169 -p----niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
| -+|++.+||+..++.|||+|.+ |-++++++..+...+++..+++.+++||+.++.+||+.+++|.||||+|||
T Consensus 146 DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENIL 224 (415)
T KOG0671|consen 146 DPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENIL 224 (415)
T ss_pred CCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEE
Confidence 2 3788999999999999999998 779999998888889999999999999999999999999999999999999
Q ss_pred EccCC-----------------CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHH
Q 008197 244 FKSAK-----------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 305 (574)
Q Consensus 244 l~~~~-----------------~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~el 305 (574)
+.+.. .+..|+|+|||.|.+.... ...++.|..|+|||++.+ +++.++||||+||||+||
T Consensus 225 fvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 225 FVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred EeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC--cceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 96421 2467999999999875433 367899999999998876 679999999999999999
Q ss_pred HhCCCCCCCCChhH---HHHHHHhCCCCC-------------CCCCCCC-----------------------CC---HHH
Q 008197 306 LCGRRPFWDKTEDG---IFKEVLRNKPDF-------------RRKPWPS-----------------------IS---NSA 343 (574)
Q Consensus 306 ltg~~Pf~~~~~~~---~~~~i~~~~~~~-------------~~~~~~~-----------------------~~---~~~ 343 (574)
+||...|......+ +.+.|+...+.. ....|++ .+ .++
T Consensus 303 ytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred eccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 99999998776544 333333211100 0001211 11 147
Q ss_pred HHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 344 KDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 344 ~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.+||++||..||.+|+|+.|+|.||||+..
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred HHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 799999999999999999999999999854
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=337.93 Aligned_cols=257 Identities=29% Similarity=0.499 Sum_probs=216.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||.|+||.||+|.+..++..+|+|++..... ......+.+|+.+++.+ +||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--------------~~~~~~~~~e~~~l~~l-~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--------------QTSVDELRKEVQAMSQC-NHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--------------chHHHHHHHHHHHHHhc-CCCCEEEEE
Confidence 368999999999999999999988999999999865421 12456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+.+...+.+|+||||+++++|.+.+..... ..+++..+..++.||+.||.|||++||+||||+|+||+++ +++.++
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~ 142 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVK 142 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEE
Confidence 999999999999999999999998855432 5689999999999999999999999999999999999998 468899
Q ss_pred EEeeccccccCCCCC-----ccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||++........ ....+|+..|+|||++... .+.++|+|||||++|+|++|+.||...+....+..+...
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (267)
T cd06610 143 IADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN 222 (267)
T ss_pred EcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC
Confidence 999999876543322 1345789999999988654 688999999999999999999999877766666666554
Q ss_pred CCCCCCC--CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 328 KPDFRRK--PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 328 ~~~~~~~--~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....... .+..+++.+.++|.+||..||.+|||+.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 3322111 124678999999999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-42 Score=339.98 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=216.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|++..++..||+|.+.... .......+.+|+.+++.+. ||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~e~~~l~~l~-h~~i~~~~~ 66 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--------------AEDEIEDIQQEIQFLSQCR-SPYITKYYG 66 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--------------cchHHHHHHHHHHHHHHcC-CCCeeeeeE
Confidence 6889999999999999999999999999999986531 1123456789999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.++..+|+|+||+++++|.+++.. .++++..+..++.|++.||.|||+.+++||||+|+||+++ .++.++|+
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~ 140 (274)
T cd06609 67 SFLKGSKLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLA 140 (274)
T ss_pred EEEECCeEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEc
Confidence 99999999999999999999988743 3789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCC-CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+....... .
T Consensus 141 d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~ 218 (274)
T cd06609 141 DFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPS--L 218 (274)
T ss_pred ccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCC--C
Confidence 99999876543 23345678999999998865 46889999999999999999999998766555555444432211 1
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
....+++++.++|.+||..+|++|||+.++++||||+....
T Consensus 219 ~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 219 EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 11227889999999999999999999999999999987544
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=335.62 Aligned_cols=255 Identities=25% Similarity=0.437 Sum_probs=218.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..+++.+|||.+..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~~-~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-------------TKDERLAAQNECQVLKLL-SHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-------------ccHHHHHHHHHHHHHhhC-CCCchhheee
Confidence 48899999999999999999999999999999875421 123356788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+...+.+++||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||+|+||+++. .+..+||+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~ 144 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIG 144 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEc
Confidence 9999999999999999999999886655566899999999999999999999999999999999999974 34578999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
|||++.............|++.|+|||.+.+. .+.++||||||+++|+|++|+.||...+.......+...... ..
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 221 (256)
T cd08220 145 DFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA---PI 221 (256)
T ss_pred cCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC---CC
Confidence 99999877655444556889999999988654 478999999999999999999999887776666666554322 11
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 336 ~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...++..+.++|.+||..+|.+|||+.++++||||
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 23578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=341.59 Aligned_cols=256 Identities=29% Similarity=0.517 Sum_probs=209.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.+ +||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------------~~~~~~~~~~e~~~l~~~-~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-------------DPVIKKIALREIRMLKQL-KHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-------------CccccHHHHHHHHHHHhC-CCCCEeeee
Confidence 369999999999999999999999999999998865310 011234578899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.....+++||||+++++|...+ .....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~--~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l 141 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELE--KNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKL 141 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHH--hCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEE
Confidence 9999999999999999987776654 2335689999999999999999999999999999999999998 4678999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC--
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-- 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 330 (574)
+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|++||.+....+....+......
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 221 (286)
T cd07847 142 CDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLI 221 (286)
T ss_pred CccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9999998765433 3345578899999998864 3578999999999999999999999877654444333221000
Q ss_pred -----------------CCC--------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 331 -----------------FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 331 -----------------~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.+. ..++.++..+.+||.+||..+|++|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 222 PRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred hHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 000 0124568889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=330.02 Aligned_cols=263 Identities=29% Similarity=0.421 Sum_probs=206.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCC----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.|+++..||+|+||.||+|..+.++ ..+|||+++..+. .. .......+|+.+++.|+ ||||+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd------------~t-GiS~SAcREiaL~REl~-h~nvi 90 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD------------GT-GISMSACREIALLRELK-HPNVI 90 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC------------CC-CcCHHHHHHHHHHHHhc-CCcch
Confidence 5899999999999999999755543 2789998876521 11 11235679999999995 99999
Q ss_pred eEEEEEEc-CCEEEEEEeccCCCchHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC-
Q 008197 173 KFYNAFED-DNYVYIAMELCEGGELLDRILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA- 247 (574)
Q Consensus 173 ~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~- 247 (574)
.+..+|.. +..+++++||++. +|++.+... +...++...++.|+.||+.|+.|||++.|+||||||+|||+..+
T Consensus 91 ~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg 169 (438)
T KOG0666|consen 91 SLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG 169 (438)
T ss_pred hHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC
Confidence 99999877 8899999999976 888877432 23568999999999999999999999999999999999999853
Q ss_pred CCCCCeEEEeeccccccCCC----CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChh---
Q 008197 248 KEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED--- 318 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~--- 318 (574)
.+.|.|||+|||+|+.+... .....++.|.+|+|||++.+ .|++++||||+|||+.||+|-.+.|.+....
T Consensus 170 perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~ 249 (438)
T KOG0666|consen 170 PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKT 249 (438)
T ss_pred CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhccc
Confidence 34599999999999976543 23456789999999999875 5799999999999999999999998654221
Q ss_pred ------HHHHHHHhCCCCCCCCCCC---------------------------------CCCHHHHHHHHHccccCCCCCC
Q 008197 319 ------GIFKEVLRNKPDFRRKPWP---------------------------------SISNSAKDFVKKLLVKDPRARL 359 (574)
Q Consensus 319 ------~~~~~i~~~~~~~~~~~~~---------------------------------~~~~~~~~li~~~L~~dp~~Rp 359 (574)
..+..|+.--.......|| .-++.+.+|+.+||+.||.+|+
T Consensus 250 ~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRI 329 (438)
T KOG0666|consen 250 KNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRI 329 (438)
T ss_pred CCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhc
Confidence 1223333211111111121 1245588999999999999999
Q ss_pred CHHHHhcCccccccC
Q 008197 360 TAAQALSHPWVREGG 374 (574)
Q Consensus 360 s~~~~l~hp~~~~~~ 374 (574)
|+.++|+|+||++..
T Consensus 330 ta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 330 TAEQALEHPYFTEDP 344 (438)
T ss_pred cHHHHhcccccccCC
Confidence 999999999999864
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=341.92 Aligned_cols=261 Identities=30% Similarity=0.493 Sum_probs=210.5
Q ss_pred cccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.-....++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|+.+++.+.+||
T Consensus 12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----------------~~~~~~~~e~~~l~~l~~h~ 75 (286)
T cd06638 12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----------------DIDEEIEAEYNILKALSDHP 75 (286)
T ss_pred cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----------------chHHHHHHHHHHHHHHhcCC
Confidence 33456678999999999999999999999999999999875431 12345778999999996799
Q ss_pred CcceEEEEEE-----cCCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 170 NVVKFYNAFE-----DDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 170 niv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
||+++++++. .++.+++||||++|++|.+.+.. .....+++..+..++.|++.||.|||+.+|+||||||+||
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~ni 155 (286)
T cd06638 76 NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNI 155 (286)
T ss_pred CeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhE
Confidence 9999999873 45679999999999999887643 2345689999999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCC-CccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCC
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDK 315 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~ 315 (574)
+++. ++.+||+|||++....... ......|++.|+|||++.. .++.++||||+||++|+|++|+.||...
T Consensus 156 li~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~ 232 (286)
T cd06638 156 LLTT---EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL 232 (286)
T ss_pred EECC---CCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence 9984 6789999999987654322 2234579999999998742 3578999999999999999999999776
Q ss_pred ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 316 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
........+...... .......++..+.+||.+||+.+|++|||+.++++||||
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 233 HPMRALFKIPRNPPP-TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred chhHHHhhccccCCC-cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 554443333222111 111112356789999999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-42 Score=342.20 Aligned_cols=258 Identities=27% Similarity=0.487 Sum_probs=215.2
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|++.+.||.|+||.||+|++..+++.||+|.+..... ...+.+.+|+.+++.+ .||||+++
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---------------~~~~~~~~e~~~l~~~-~h~~v~~~ 82 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---------------PKKELIINEILVMREN-KNPNIVNY 82 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---------------chHHHHHHHHHHHHhC-CCCCEeeE
Confidence 3589999999999999999999999999999998865421 2345678999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.+..+...|+||||++|++|.+++. ...+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~k 156 (296)
T cd06654 83 LDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVK 156 (296)
T ss_pred EEEEEeCCEEEEeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEE
Confidence 999999999999999999999999773 24689999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++........ .....|++.|+|||.+.+. .+.++|||||||++|+|++|+.||...........+...... .
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~ 235 (296)
T cd06654 157 LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-E 235 (296)
T ss_pred ECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC-C
Confidence 999999876543322 2345789999999988654 578999999999999999999999877654444333332211 1
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
....+.++..+.++|.+||..+|.+|||+.++++||||.....
T Consensus 236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 1122457889999999999999999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=341.15 Aligned_cols=258 Identities=33% Similarity=0.511 Sum_probs=216.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+. ||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~e~~~l~~l~-h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---------------EEELEDFMVEIDILSECK-HPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---------------HHHHHHHHHHHHHHHhCC-CCceeEE
Confidence 357999999999999999999998899999999986431 123456889999999995 9999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++..+..+|+||||+++++|.+++.. ....+++..++.++.|++.||.|||+.||+|+||||+||+++ .++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~ 143 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVK 143 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEE
Confidence 9999999999999999999999887643 235799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCC-CCccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||++...... .......||+.|+|||++.. .++.++|||||||++|+|++|+.||...........+...
T Consensus 144 l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 223 (280)
T cd06611 144 LADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS 223 (280)
T ss_pred EccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC
Confidence 9999998754332 22334579999999998742 2466899999999999999999999887766666666554
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
..... ...+.++.++.++|.+||..+|.+||++.++++||||+..
T Consensus 224 ~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 224 EPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred CCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 32211 1123578899999999999999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=342.34 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=207.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..+++.||||.+.... .......+.+|+.+++++ +||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~~ 66 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--------------TVELQKQIMSELEILYKC-DSPYIIGFYG 66 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--------------ChHHHHHHHHHHHHHHhC-CCCCeeeEEE
Confidence 5788999999999999999999999999999986531 122345688999999999 6999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+..++||||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++ .++.++|+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~ 137 (279)
T cd06619 67 AFFVENRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLC 137 (279)
T ss_pred EEEECCEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEe
Confidence 99999999999999999988543 3578999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh-------HHHHHHHhCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-------GIFKEVLRNK 328 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-------~~~~~i~~~~ 328 (574)
|||++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+....
T Consensus 138 dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 216 (279)
T cd06619 138 DFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216 (279)
T ss_pred eCCcceecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC
Confidence 99999765432 2345689999999998765 4688999999999999999999999653211 2222222221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+..+....++++.+||.+||..+|.+||++.++++||||+...
T Consensus 217 --~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 217 --PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred --CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 12222345788999999999999999999999999999998753
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=339.98 Aligned_cols=259 Identities=29% Similarity=0.488 Sum_probs=212.7
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
...++|.+.+.||+|+||.||+|.+..+++.+|+|.+.... .....+.+|+.+++++.+||||+
T Consensus 19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----------------~~~~~~~~e~~~l~~l~~h~ni~ 82 (291)
T cd06639 19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----------------DVDEEIEAEYNILQSLPNHPNVV 82 (291)
T ss_pred CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----------------cHHHHHHHHHHHHHHhcCCCCeE
Confidence 35678999999999999999999999999999999886531 12345778999999996799999
Q ss_pred eEEEEEEcC-----CEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 173 KFYNAFEDD-----NYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 173 ~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
++++++... +.+|+||||++|++|.+++.. .....+++..++.++.|++.||.|||+.+|+||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~ 162 (291)
T cd06639 83 KFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT 162 (291)
T ss_pred EEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc
Confidence 999998643 468999999999999987743 2345789999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCC-CccccccCccccchHhhhcC------CCCCcchHhHHHHHHHHHhCCCCCCCCChh
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKTED 318 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~DvwSlG~il~elltg~~Pf~~~~~~ 318 (574)
.++.+||+|||++....... ......|+..|+|||++... ++.++|||||||++|+|++|+.||......
T Consensus 163 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~ 239 (291)
T cd06639 163 ---TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV 239 (291)
T ss_pred ---CCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH
Confidence 47789999999987654322 22345789999999987532 478999999999999999999999877665
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
.....+........ .....++..+.+||.+||..+|++||++.++++||||+
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 240 KTLFKIPRNPPPTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHhcCCCCCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 55555544332211 11134667899999999999999999999999999995
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=342.08 Aligned_cols=259 Identities=31% Similarity=0.468 Sum_probs=215.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.|++++.||.|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+ +||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---------------EEELEDYMVEIEILATC-NHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---------------HHHHHHHHHHHHHHHhC-CCCcEeee
Confidence 457999999999999999999999999999999986531 23456788899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.+..++.+|+||||+++++|...+... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+|
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~k 150 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIK 150 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEE
Confidence 99999999999999999999987766433 45789999999999999999999999999999999999998 478899
Q ss_pred EEeeccccccCCC-CCccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+...
T Consensus 151 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 230 (292)
T cd06644 151 LADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 230 (292)
T ss_pred EccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC
Confidence 9999998654322 22345578999999998742 2467899999999999999999999877666555555443
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... .......++.++.+||.+||..+|++||++.++++||||....
T Consensus 231 ~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 231 EPP-TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred CCc-cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 221 1111235778999999999999999999999999999997643
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=333.40 Aligned_cols=254 Identities=28% Similarity=0.474 Sum_probs=219.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||.+++..+++.+++|.+.... ........+.+|+.+++++ +||||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------------~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR-------------LSEKERRDALNEIVILSLL-QHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecc-------------cchhHHHHHHHHHHHHHhC-CCCCeeEEEe
Confidence 5899999999999999999999999999999886531 1123445678999999999 6999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+++||||+++++|.+.+.......+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.+||+
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~ 143 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLG 143 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEEC
Confidence 999999999999999999999988665556789999999999999999999999999999999999998 47789999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++....... ......|++.|+|||++.+. ++.++||||||+++|+|++|..||......+....+..+.....
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (256)
T cd08221 144 DFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV-- 221 (256)
T ss_pred cCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 999997654333 23456799999999987654 57889999999999999999999988877777777766543321
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.+.++.++.++|.+||..+|.+|||+.++++|||+
T Consensus 222 -~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 222 -VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 14578999999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=357.74 Aligned_cols=253 Identities=26% Similarity=0.445 Sum_probs=212.3
Q ss_pred cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCC
Q 008197 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 182 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~ 182 (574)
.||+|.||+||.|+|..|...+|||.+.... ....+.+..||.+.++|+ |.|||++++.+..++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---------------sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senG 645 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---------------SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENG 645 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---------------chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCC
Confidence 6999999999999999999999999986541 234567889999999996 999999999999999
Q ss_pred EEEEEEeccCCCchHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 183 YVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 183 ~~~lv~e~~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
++-|.||-++||+|.+.+. .+=+++ .+..+..+..||++||.|||++.|||||||-+|+|++. -.|.+||+|||-
T Consensus 646 f~kIFMEqVPGGSLSsLLr-skWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT--ySGvlKISDFGT 722 (1226)
T KOG4279|consen 646 FFKIFMEQVPGGSLSSLLR-SKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT--YSGVLKISDFGT 722 (1226)
T ss_pred eEEEEeecCCCCcHHHHHH-hccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee--ccceEEeccccc
Confidence 9999999999999988764 445677 89999999999999999999999999999999999985 578999999999
Q ss_pred ccccCC-CCCccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhCCCCCCCCC
Q 008197 261 SDFIKP-GKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKP 335 (574)
Q Consensus 261 a~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~~~~~~ 335 (574)
++.... +..+.++.||..|||||++.. .|+.++|||||||++.||.||++||....... ...++ +-....++.
T Consensus 723 sKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV--GmyKvHP~i 800 (1226)
T KOG4279|consen 723 SKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV--GMYKVHPPI 800 (1226)
T ss_pred chhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh--cceecCCCC
Confidence 876543 344567899999999999974 46899999999999999999999997653322 22121 212222222
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 336 ~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
...+|.+++.||.+|+.++|.+||+|.++|.+||++....+
T Consensus 801 Peelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 801 PEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKK 841 (1226)
T ss_pred cHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCC
Confidence 24678889999999999999999999999999999976433
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=342.35 Aligned_cols=259 Identities=27% Similarity=0.421 Sum_probs=209.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..+|+.||||.+..... .......+.+|+.+++.+.+||||+++++
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-------------~~~~~~~~~~E~~~l~~l~~~~~i~~~~~ 68 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-------------EEGIPPTALREISLLQMLSESIYIVRLLD 68 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-------------ccCCchHHHHHHHHHHHccCCCCccceee
Confidence 68999999999999999999999999999998765310 01123467889999999977899999999
Q ss_pred EEEcCCE-----EEEEEeccCCCchHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 177 AFEDDNY-----VYIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 177 ~~~~~~~-----~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
++..... .|+||||+++ +|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-- 145 (295)
T cd07837 69 VEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-- 145 (295)
T ss_pred eEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--
Confidence 9987655 8999999975 7888775432 246899999999999999999999999999999999999984
Q ss_pred CCCCeEEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+.
T Consensus 146 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 146 QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 3688999999998754322 22233467899999998754 35789999999999999999999998876665555443
Q ss_pred hCCCCCCC------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 326 RNKPDFRR------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 326 ~~~~~~~~------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
........ ...+.+++.+.+||.+||.+||.+||++.+++.||||+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 32110000 01245788999999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=342.69 Aligned_cols=261 Identities=28% Similarity=0.486 Sum_probs=215.5
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
...+|.+.+.||.|+||.||+|.+..+|+.||||.+.... ....+.+.+|+.+++.+ +||||++
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~e~~~l~~~-~h~~i~~ 80 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---------------QPKKELIINEILVMREN-KNPNIVN 80 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---------------cchHHHHHHHHHHHHhC-CCCCEee
Confidence 3468999999999999999999999999999999886531 11235678899999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++...+.+|+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++ .++.+
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~ 154 (297)
T cd06656 81 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSV 154 (297)
T ss_pred EEEEEecCCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCE
Confidence 99999999999999999999999988732 4689999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|..||...........+......
T Consensus 155 ~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~- 233 (297)
T cd06656 155 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP- 233 (297)
T ss_pred EECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC-
Confidence 9999999876543322 2345789999999988654 578999999999999999999999776553333222222111
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
.......++..+.+||.+||..+|.+||++.++++||||+......
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~ 279 (297)
T cd06656 234 ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279 (297)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccccc
Confidence 1112235778899999999999999999999999999999765544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=338.16 Aligned_cols=256 Identities=31% Similarity=0.479 Sum_probs=214.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||.|+||.||+|.+..++..+|+|.+.... ....+.+.+|+.+++.+ +||||+++++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~ii~~~~ 69 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---------------EEELEDYMVEIDILASC-DHPNIVKLLD 69 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---------------HHHHHHHHHHHHHHHHC-CCCCeeeEEE
Confidence 4788999999999999999999999999999886531 12345678899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++..++..|+|+||+++++|...+.. ...++++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||+
T Consensus 70 ~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~ 145 (282)
T cd06643 70 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLA 145 (282)
T ss_pred EEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEc
Confidence 99999999999999999999876643 345799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCC-CCccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 257 DFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 257 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
|||++...... .......||+.|+|||++.. .++.++|||||||++|+|++|++||...+.......+.....
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~ 225 (282)
T cd06643 146 DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP 225 (282)
T ss_pred cccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC
Confidence 99998754322 22345679999999998742 246789999999999999999999987776666656554432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
... .....++.++.+||.+||..+|.+||++.++++||||+..
T Consensus 226 ~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 226 PTL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred CCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 211 1123578899999999999999999999999999999864
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-42 Score=339.25 Aligned_cols=254 Identities=30% Similarity=0.451 Sum_probs=208.5
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||.|+||.||+|.+..+|+.||+|.+.+.... .......+..|+.+++.+ +||||+++++++...+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~------------~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~ 67 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK------------KRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDD 67 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh------------hhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCe
Confidence 69999999999999999999999998754210 012234567899999999 59999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
+|+||||+++++|.+++.......+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.+||+|||++..
T Consensus 68 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~~~ 144 (277)
T cd05577 68 LCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVE 144 (277)
T ss_pred EEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcchhh
Confidence 99999999999999988665545799999999999999999999999999999999999998 478999999999876
Q ss_pred cCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHH
Q 008197 264 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 342 (574)
Q Consensus 264 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 342 (574)
...........++..|+|||++.+ .++.++|||||||++|+|++|+.||...........+.......+....+.+++.
T Consensus 145 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (277)
T cd05577 145 LKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPE 224 (277)
T ss_pred hccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHH
Confidence 654444445678899999998764 4578899999999999999999999765442222222222222222233457899
Q ss_pred HHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 343 AKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 343 ~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.++|.+||..+|.+|| ++.+++.||||+..
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred HHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 99999999999999999 89999999999763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-42 Score=338.02 Aligned_cols=257 Identities=30% Similarity=0.522 Sum_probs=212.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||.|+||.||+|.++.+++.+|+|++.... ...+.+.+|+.+++++.+||||++
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----------------~~~~~~~~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----------------DEEEEIKEEYNILRKYSNHPNIAT 67 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----------------hhHHHHHHHHHHHHHhcCCCChhe
Confidence 3468999999999999999999999899999999987541 134568899999999967999999
Q ss_pred EEEEEEcCC------EEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 174 FYNAFEDDN------YVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 174 ~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
+++++.... .+|+||||+++++|.+.+.... ...+++..+..++.|++.||.|||+.+++|+||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 5899999999999988775433 56799999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCC-CccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCCChh
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTED 318 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~ 318 (574)
.++.+||+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|..||......
T Consensus 148 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 224 (275)
T cd06608 148 ---KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM 224 (275)
T ss_pred ---cCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH
Confidence 47889999999987654322 2234578999999998753 2467899999999999999999999776555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.....+........ .....++..+.+||.+||..||.+|||+.+++.|||+
T Consensus 225 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 225 RALFKIPRNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHHHhhccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 55555544332111 1112367899999999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=333.29 Aligned_cols=254 Identities=25% Similarity=0.529 Sum_probs=216.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||++.+..+|+.||+|.+..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-------------SPKEREESRKEVAVLSNM-KHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-------------ChHHHHHHHHHHHHHHhC-CCCCeeeeEe
Confidence 58999999999999999999999999999999865311 122345788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+..|+|+||+++++|.+.+.......+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~ 143 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLG 143 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEe
Confidence 999999999999999999999988655555789999999999999999999999999999999999998 47789999
Q ss_pred eeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++........ .....|++.|+|||++.+. .+.++|+|||||++|+|++|+.||......+....++.+.....
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (256)
T cd08218 144 DFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV-- 221 (256)
T ss_pred eccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC--
Confidence 9999976543322 2235688999999987654 57889999999999999999999988777777777766543211
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...++.++.++|.+||+.+|.+||++.+++.||||
T Consensus 222 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 222 -SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred -cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 23578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=338.21 Aligned_cols=254 Identities=27% Similarity=0.438 Sum_probs=207.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|++.+.||+|+||.||+|++..+|+.||+|++.... ......+.+|+.+++.+ +||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---------------~~~~~~~~~e~~~l~~~-~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---------------GDDFSLIQQEIFMVKEC-KHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---------------cchHHHHHHHHHHHHhc-CCCCeeee
Confidence 357999999999999999999999999999999986431 11234577899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++..++.+|+||||+++++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+|
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~ 146 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVK 146 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEE
Confidence 9999999999999999999999988743 45789999999999999999999999999999999999998 477899
Q ss_pred EEeeccccccCCCC-CccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
|+|||++....... ......|++.|+|||.+.. .++.++||||+||++|+|++|+.||...........+.....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 226 (267)
T cd06646 147 LADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNF 226 (267)
T ss_pred ECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCC
Confidence 99999998654322 2234578999999998742 346789999999999999999999965543332222222211
Q ss_pred CCCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 330 DFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 330 ~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
..+. .....++..+.+||.+||..+|++|||++++++|+|
T Consensus 227 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 227 QPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 1111 111346789999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=344.12 Aligned_cols=255 Identities=27% Similarity=0.504 Sum_probs=204.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|++..+|..||+|.+..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-------------~~~~~~~~~~ei~~l~~l-~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-------------DEGVPSSALREICLLKEL-KHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-------------cccCccchhHHHHHHHhc-CCCCeeeHHH
Confidence 58899999999999999999999999999999865311 111234567899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+++|+||+. ++|.+.+... ...+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+
T Consensus 67 ~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~ 141 (284)
T cd07839 67 VLHSDKKLTLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLA 141 (284)
T ss_pred HhccCCceEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEEC
Confidence 9999999999999996 5788776433 45799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhCC----
Q 008197 257 DFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNK---- 328 (574)
Q Consensus 257 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~~---- 328 (574)
|||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|..||... +....+..+....
T Consensus 142 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07839 142 DFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 221 (284)
T ss_pred ccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 99999765432 222345788999999988653 478899999999999999999886543 3333333332210
Q ss_pred ----------CCC---CC--------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 ----------PDF---RR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ----------~~~---~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+ +. ...+.+++++.+||.+||..||.+|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 222 EESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000 00 1123578899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=342.33 Aligned_cols=258 Identities=29% Similarity=0.474 Sum_probs=216.5
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.+.+.||.|+||.||++.+..+++.||||.+..... ........+.+|+.+++.+ +||||+++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~ 68 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL------------ILRNQIQQVFVERDILTFA-ENPFVVSMFC 68 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh------------hhHHHHHHHHHHHHHHHhC-CCCCeeeeEE
Confidence 58999999999999999999999999999998875421 1112345678999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+..++.+++||||++|++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+
T Consensus 69 ~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~ 143 (305)
T cd05609 69 SFETKRHLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLT 143 (305)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEe
Confidence 99999999999999999999988743 35789999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC----------------CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH
Q 008197 257 DFGLSDFIKPGK----------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 319 (574)
Q Consensus 257 DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~ 319 (574)
|||+++...... ......|+..|+|||.+.. .++.++|||||||++|+|++|..||.+....+
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~ 223 (305)
T cd05609 144 DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 223 (305)
T ss_pred eCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999986321100 0112467889999998754 46889999999999999999999999888777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHHHhcCcccccc
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 373 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~~l~hp~~~~~ 373 (574)
....+......++... +.++.++.++|.+||..+|++||+ +.++|+||||...
T Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 224 LFGQVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 7777766554443332 257889999999999999999998 7999999999763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=365.94 Aligned_cols=249 Identities=30% Similarity=0.508 Sum_probs=208.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+++|.+.|.+|||+.||+|.+...|..||+|++-.. .+...+.+.+||++|+.|++|||||.++
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---------------de~~L~~v~~EI~~MK~L~gh~nIV~yi 101 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---------------DEEALNAVKREIDIMKLLSGHKNIVSYI 101 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---------------CHHHHHHHHHHHHHHHHhcCCCceeeEe
Confidence 3688999999999999999999888899999988653 2456778999999999999999999999
Q ss_pred EE-EE---c---CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEcc
Q 008197 176 NA-FE---D---DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKS 246 (574)
Q Consensus 176 ~~-~~---~---~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~ 246 (574)
+. .. . .-.++|+||||.||.|.+++......+|++.++..|++++++|+.+||... |||||||-+||||.
T Consensus 102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls- 180 (738)
T KOG1989|consen 102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS- 180 (738)
T ss_pred ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc-
Confidence 93 22 1 136899999999999999998777778999999999999999999999987 99999999999999
Q ss_pred CCCCCCeEEEeeccccccCCCC-Ccc---------ccccCccccchHhhh---c-CCCCCcchHhHHHHHHHHHhCCCCC
Q 008197 247 AKEDSSLKATDFGLSDFIKPGK-KFQ---------DIVGSAYYVAPEVLK---R-KSGPESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~-~~~---------~~~gt~~y~aPE~~~---~-~~~~~~DvwSlG~il~elltg~~Pf 312 (574)
.+++.||||||.|.-.-... ... ....|+.|+|||++. + ..++|+|||||||+||-|++...||
T Consensus 181 --~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PF 258 (738)
T KOG1989|consen 181 --ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPF 258 (738)
T ss_pred --CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCc
Confidence 47899999999986432111 111 135799999999975 2 3489999999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
.+... ..|+.+...++ +.+.++..+.+||+.||+.||.+||++-+++.+-
T Consensus 259 e~sg~----laIlng~Y~~P--~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~ 308 (738)
T KOG1989|consen 259 EESGK----LAILNGNYSFP--PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI 308 (738)
T ss_pred CcCcc----eeEEeccccCC--CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence 66533 34566655444 4578899999999999999999999999987643
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=341.54 Aligned_cols=260 Identities=28% Similarity=0.393 Sum_probs=212.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++++.||+|+||.||+|.+..+|..||+|.+.... .......+.+|+.+++++ +||||+++++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~e~~~l~~~-~~~~i~~~~~ 66 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--------------DESKFNQIIMELDILHKA-VSPYIVDFYG 66 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--------------CHHHHHHHHHHHHHHHhc-CCCcHHhhhh
Confidence 6899999999999999999999899999999886431 122345788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
.+...+.+|+||||++|++|..++.... ...+++..+..++.||+.||.|||+ .+|+||||||+||+++. ++.+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~---~~~~~ 143 (286)
T cd06622 67 AFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG---NGQVK 143 (286)
T ss_pred heecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC---CCCEE
Confidence 9999999999999999999987764321 2378999999999999999999997 59999999999999984 78899
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcC-------CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||++...... ......|++.|+|||++.+. ++.++|||||||++|+|++|+.||...........+...
T Consensus 144 l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 144 LCDFGVSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred EeecCCcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 9999998765332 22345788999999987532 367899999999999999999999766554444332221
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
....+....+.++.++.+||.+||..+|.+||++.++++||||.....
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 111122223458899999999999999999999999999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=341.44 Aligned_cols=256 Identities=33% Similarity=0.525 Sum_probs=211.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..+|..||||++..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-------------~~~~~~~~~~e~~~l~~~-~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-------------EGGIPNQALREIKALQAC-QHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-------------cchhhHHHHHHHHHHHhC-CCCCCcceee
Confidence 48999999999999999999999999999999875421 112345788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++..+..+|+|+||+ +++|.+.+... ...+++..++.++.||+.||.|||++||+|+||||+||+++. ++.++|+
T Consensus 67 ~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~---~~~~~l~ 141 (286)
T cd07832 67 VFPHGSGFVLVMEYM-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIA 141 (286)
T ss_pred EEecCCeeEEEeccc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC---CCcEEEe
Confidence 999999999999999 99999887543 367999999999999999999999999999999999999984 7889999
Q ss_pred eeccccccCCCC--CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC--
Q 008197 257 DFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-- 330 (574)
Q Consensus 257 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 330 (574)
|||++....... ......|+..|+|||++.+ .++.++||||+||++|+|++|.+||.+......+..+......
T Consensus 142 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~ 221 (286)
T cd07832 142 DFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPN 221 (286)
T ss_pred eeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCC
Confidence 999988664432 2345679999999998754 3478999999999999999998888776655555444332110
Q ss_pred -----------------CCC-------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 331 -----------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 331 -----------------~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
++. ..++..+..+.+||.+||..+|.+|||+.++|.||||.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 222 EETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 000 01235678899999999999999999999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=334.45 Aligned_cols=252 Identities=31% Similarity=0.525 Sum_probs=209.5
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||.|+||.||+|.+..+|+.||||.+.+.... .......+..|..++....+||||+++++++...
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~------------~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 69 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI------------AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK 69 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh------------HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC
Confidence 5699999999999999999999999998754210 0112233455665555554799999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+.+|+|+||++|++|.+++. ....+++..+..++.||+.||.|||+.+++||||+|+||+++ .++.+||+|||++
T Consensus 70 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~ 144 (260)
T cd05611 70 DYLYLVMEYLNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLS 144 (260)
T ss_pred CeEEEEEeccCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccc
Confidence 99999999999999998774 335789999999999999999999999999999999999998 4788999999998
Q ss_pred cccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCC
Q 008197 262 DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340 (574)
Q Consensus 262 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 340 (574)
..... .....|++.|+|||.+.+. ++.++||||||+++|+|++|..||...+....+..+......++....+.++
T Consensus 145 ~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T cd05611 145 RNGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCS 221 (260)
T ss_pred eeccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCC
Confidence 75432 2345788999999988654 4889999999999999999999998888777777776665555444445688
Q ss_pred HHHHHHHHHccccCCCCCCC---HHHHhcCcccccc
Q 008197 341 NSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 373 (574)
Q Consensus 341 ~~~~~li~~~L~~dp~~Rps---~~~~l~hp~~~~~ 373 (574)
+.+.++|.+||+.+|++||+ +.+++.||||+..
T Consensus 222 ~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 222 PEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred HHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 99999999999999999995 5799999999764
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=346.56 Aligned_cols=251 Identities=27% Similarity=0.435 Sum_probs=191.9
Q ss_pred cccccccCCeEEEEEEEcC--CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 101 GKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.+||+|+||.||+|+++. ++..||+|.+.... ....+.+|+.+++.+ +||||+++++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----------------~~~~~~~E~~~l~~l-~h~niv~~~~~~ 67 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----------------ISMSACREIALLREL-KHPNVIALQKVF 67 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----------------CcHHHHHHHHHHHhC-CCCCeeeEEEEE
Confidence 4679999999999998654 56899999886531 123567899999999 599999999988
Q ss_pred E--cCCEEEEEEeccCCCchHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC-C
Q 008197 179 E--DDNYVYIAMELCEGGELLDRILAK-------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-K 248 (574)
Q Consensus 179 ~--~~~~~~lv~e~~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~-~ 248 (574)
. .+..+|+||||+. ++|.+.+... ....+++..+..++.||+.||.|||+.||+||||||+|||+... .
T Consensus 68 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~ 146 (317)
T cd07867 68 LSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP 146 (317)
T ss_pred eccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCC
Confidence 5 4668999999996 5777766422 12358899999999999999999999999999999999999532 2
Q ss_pred CCCCeEEEeeccccccCCCC----CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----
Q 008197 249 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---- 318 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~---- 318 (574)
.++.+||+|||+++...... .....+||+.|+|||++.+ .++.++|||||||++|+|+||++||......
T Consensus 147 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~ 226 (317)
T cd07867 147 ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 226 (317)
T ss_pred CCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccccccccc
Confidence 46789999999998654322 2235678999999998865 3588899999999999999999999654321
Q ss_pred -----HHHHHHHhC--------------CCCCC-------C-------------CCCCCCCHHHHHHHHHccccCCCCCC
Q 008197 319 -----GIFKEVLRN--------------KPDFR-------R-------------KPWPSISNSAKDFVKKLLVKDPRARL 359 (574)
Q Consensus 319 -----~~~~~i~~~--------------~~~~~-------~-------------~~~~~~~~~~~~li~~~L~~dp~~Rp 359 (574)
.....+... .+.++ . ......+..+.+||.+||+.||.+||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~ 306 (317)
T cd07867 227 NPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRI 306 (317)
T ss_pred ccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCccccc
Confidence 111111110 00000 0 00012345688999999999999999
Q ss_pred CHHHHhcCccc
Q 008197 360 TAAQALSHPWV 370 (574)
Q Consensus 360 s~~~~l~hp~~ 370 (574)
|+.++|+||||
T Consensus 307 t~~e~l~hp~f 317 (317)
T cd07867 307 TSEQALQDPYF 317 (317)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=340.66 Aligned_cols=257 Identities=30% Similarity=0.519 Sum_probs=216.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|++.+.||.|+||.||+|.+..+|+.||||.+.... ....+.+.+|+.+++.+ +||||+.++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~iv~~~ 82 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---------------QPKKELIINEILVMKEL-KNPNIVNFL 82 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---------------CchHHHHHHHHHHHHhc-CCCceeeee
Confidence 47999999999999999999999999999999886431 12345678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+|+|+||+++++|..++. ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl 156 (296)
T cd06655 83 DSFLVGDELFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKL 156 (296)
T ss_pred eeEecCceEEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEE
Confidence 99999999999999999999988773 24689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++........ .....|++.|+|||.+.+. ++.++|||||||++|+|++|+.||...........+...... ..
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~ 235 (296)
T cd06655 157 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-EL 235 (296)
T ss_pred ccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-cc
Confidence 99999876543322 2345789999999988654 688999999999999999999999887765555444433221 11
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.....+++.+.+||.+||..+|.+|||+.+++.||||+....
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~ 277 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKP 277 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccc
Confidence 223467889999999999999999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=338.81 Aligned_cols=253 Identities=29% Similarity=0.471 Sum_probs=206.4
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||+|+||.||+|.+..++..||+|.+..... ........+|+.++.++.+||||++++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--------------~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 66 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK--------------SLEQVNNLREIQALRRLSPHPNILRLIEV 66 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC--------------CchhhhHHHHHHHHhhcCCCCCccceEEE
Confidence 6788999999999999999999999999998865310 11122345788999998779999999999
Q ss_pred EEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 178 FEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 178 ~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+.+. +.+++||||++ ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||+|+||+++ . +.+||
T Consensus 67 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl 140 (282)
T cd07831 67 LFDRKTGRLALVFELMD-MNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKL 140 (282)
T ss_pred EecCCCCcEEEEEecCC-ccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEE
Confidence 9987 89999999996 5888877543 35789999999999999999999999999999999999998 3 89999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC----
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---- 329 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~---- 329 (574)
+|||++.............+++.|+|||++.. ..+.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 141 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (282)
T cd07831 141 ADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDA 220 (282)
T ss_pred EecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCH
Confidence 99999987655444455678999999997643 357899999999999999999999987766554444432110
Q ss_pred ------------C--CCCC-------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 330 ------------D--FRRK-------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 330 ------------~--~~~~-------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
. ++.. ..+.++..+.++|.+||.++|++|||+.++++||||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 221 EVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred HHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0 0000 013567899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=340.07 Aligned_cols=262 Identities=26% Similarity=0.445 Sum_probs=212.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|++|.||+|.++.+|+.||||.+..... .......+.+|+.+++.+ +||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-------------DEGVPSTAIREISLLKEM-QHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-------------cccchHHHHHHHHHHHhc-cCCCEeeEE
Confidence 469999999999999999999999999999998865311 112335678899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+...+|+||||++ ++|.+.+.......+++..+..++.||+.||.|||+++|+||||+|+||+++. .++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl 144 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKL 144 (294)
T ss_pred EEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEE
Confidence 99999999999999995 58888775554455788999999999999999999999999999999999984 3467999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|++||......+.+.++........
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~ 224 (294)
T PLN00009 145 ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPN 224 (294)
T ss_pred cccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999765332 22234578899999998865 357889999999999999999999987766555554432111000
Q ss_pred CC-------------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RK-------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~-------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. ..+.+++++.++|.+||..+|++||++.+++.||||++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 225 EETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291 (294)
T ss_pred hhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence 00 1245788899999999999999999999999999998753
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=340.23 Aligned_cols=282 Identities=29% Similarity=0.470 Sum_probs=229.2
Q ss_pred cCCCCCCCCcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHH
Q 008197 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160 (574)
Q Consensus 81 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 160 (574)
.......|.....+.++|-++.+||+|+|+.||+|.|....++||||+-..++. +.+.+. +.......+|.+
T Consensus 448 ~NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~------WrdEKK--eNYhKHAcREyr 519 (775)
T KOG1151|consen 448 HNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKN------WRDEKK--ENYHKHACREYR 519 (775)
T ss_pred cccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccc------hhhHhh--hhHHHHHHHHHh
Confidence 334445566667788999999999999999999999999999999998766532 222222 235667889999
Q ss_pred HHHHhcCCCCcceEEEEEE-cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--CCEeecC
Q 008197 161 ILQALAGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDM 237 (574)
Q Consensus 161 il~~l~~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--~iiHrDl 237 (574)
|.+.| +||.||++|++|. +.+.+|-|+|||+|.+|.-+| +....+++.+++.|+.||+.||.||.+. .|||-||
T Consensus 520 IHKeL-DHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYL--KQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDL 596 (775)
T KOG1151|consen 520 IHKEL-DHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYL--KQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDL 596 (775)
T ss_pred hhhcc-CcceeeeeeeeeeeccccceeeeeecCCCchhHHH--HhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeecc
Confidence 99999 6999999999997 567799999999999986666 3346799999999999999999999986 6999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCC--------CccccccCccccchHhhh-c----CCCCCcchHhHHHHHHH
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLK-R----KSGPESDVWSIGVITYI 304 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~-~----~~~~~~DvwSlG~il~e 304 (574)
||.||||.+....|.+||+|||+++.+.... .+....||.||+|||++. + +.+.++||||+|||+|.
T Consensus 597 KPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQ 676 (775)
T KOG1151|consen 597 KPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQ 676 (775)
T ss_pred CCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhh
Confidence 9999999987778999999999998875432 123468999999999874 2 23778999999999999
Q ss_pred HHhCCCCCCCCCh-hHHHH--HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 305 LLCGRRPFWDKTE-DGIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 305 lltg~~Pf~~~~~-~~~~~--~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
++.|+.||...-. ..++. .|++ ......++-|.++.++++||++||.+-.++|....++..||||....
T Consensus 677 ClYGrKPFGhnqsQQdILqeNTIlk-AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~ 748 (775)
T KOG1151|consen 677 CLYGRKPFGHNQSQQDILQENTILK-ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHI 748 (775)
T ss_pred hhccCCCCCCchhHHHHHhhhchhc-ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchh
Confidence 9999999965533 33332 2332 23334445578999999999999999999999999999999998754
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=336.31 Aligned_cols=253 Identities=28% Similarity=0.504 Sum_probs=213.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..++..||+|.+.+... ........+.+|+.+++++ +||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 67 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC------------VEKGSVRNVLNERRILQEL-NHPFLVNLWY 67 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh------------cchhHHHHHHHHHHHHHhC-CCCChHHHHH
Confidence 48899999999999999999999999999999976421 1112456789999999999 6999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+..+..+++|+||+.|++|.+++... .++++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+
T Consensus 68 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~ 142 (258)
T cd05578 68 SFQDEENMYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHIT 142 (258)
T ss_pred hhcCCCeEEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEe
Confidence 999999999999999999999887433 5799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRR 333 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~~~~ 333 (574)
|||++.............|+..|+|||++... ++.++|+||||+++|+|++|..||...+. ...+...... ...
T Consensus 143 d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~ 219 (258)
T cd05578 143 DFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---ADV 219 (258)
T ss_pred ecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---ccc
Confidence 99999876554444556789999999988654 58899999999999999999999987664 2222222221 111
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCH--HHHhcCccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTA--AQALSHPWV 370 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~--~~~l~hp~~ 370 (574)
...+.++..+.++|.+||..||.+||++ .++++||||
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 220 LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred cCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 2224578999999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=337.24 Aligned_cols=256 Identities=26% Similarity=0.463 Sum_probs=214.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|+..+.||.|+||.||+|.+..++..||||.+..... ......+.+|+.+++.+ +||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--------------EDEIEDIQQEITVLSQC-DSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--------------HHHHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 468889999999999999999998999999998865311 12346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+||||++||+|.+++. ..++++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l 142 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKL 142 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEE
Confidence 99999999999999999999998873 25689999999999999999999999999999999999998 4778999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++........ .....++..|+|||++.+. .+.++|+|||||++|+|++|..||...........+..... .
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~ 219 (277)
T cd06640 143 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---P 219 (277)
T ss_pred cccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---C
Confidence 99999976543322 2345788999999988654 58899999999999999999999987766555544432221 1
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.....++..+.++|.+||..+|++||++.+++.||||.....
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 222356788999999999999999999999999999987543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=337.76 Aligned_cols=241 Identities=17% Similarity=0.233 Sum_probs=202.6
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc-
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED- 180 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~- 180 (574)
..||+|++|.||+|.. +|+.||||.+.+... ......+.+.+|+.+|+++ +||||+++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHK------------GHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEecccccc------------ccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEec
Confidence 4689999999999975 789999999876421 1112346788999999999 59999999999876
Q ss_pred ---CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 181 ---DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 181 ---~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
...+++||||++||+|.+++.. ...+++.....++.|++.||.|||+ .+++||||||+|||++ .++.+||+
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~---~~~~~kl~ 165 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT---ENYKLKII 165 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC---CCCcEEEc
Confidence 4578999999999999998843 4578999999999999999999998 4999999999999998 47899999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
|||++....... ...+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..+......+..
T Consensus 166 dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~ 243 (283)
T PHA02988 166 CHGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL 243 (283)
T ss_pred ccchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 999998654322 23578999999999864 5688999999999999999999999988887887777665443332
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+ ...++.+.+||.+||+.||.+|||+.++++
T Consensus 244 ~--~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 244 P--LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred C--CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 2 257899999999999999999999999974
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=337.16 Aligned_cols=258 Identities=24% Similarity=0.338 Sum_probs=206.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|.+..+|..||||.+..... ......+..|+.++.+..+||||+++++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~e~~~~~~~~~~~~iv~~~~ 67 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN--------------SQEQKRLLMDLDISMRSVDCPYTVTFYG 67 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC--------------cHHHHHHHHHHHHHHHHcCCCCeeeeeE
Confidence 68999999999999999999999999999999875411 1123345667776555557999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCCe
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++..++.+|+||||++ |+|.+.+... ....+++..+..++.||+.||.|||++ +++||||||+||+++ .++.+
T Consensus 68 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~~ 143 (283)
T cd06617 68 ALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQV 143 (283)
T ss_pred EEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCE
Confidence 9999999999999996 5777766432 335789999999999999999999997 999999999999998 47899
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc-----CCCCCcchHhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~Pf~~~~-~~~~~~~i~~~ 327 (574)
||+|||++.............|+..|+|||++.+ .++.++|+|||||++|+|++|+.||.... ..+.+..+...
T Consensus 144 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 223 (283)
T cd06617 144 KLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE 223 (283)
T ss_pred EEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc
Confidence 9999999987644333344578999999998854 34788999999999999999999996532 22333344332
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. +..+...+|.++.+||.+||..+|.+||++.+++.||||+...
T Consensus 224 ~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 224 PS--PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 21 1111234789999999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=348.95 Aligned_cols=236 Identities=27% Similarity=0.416 Sum_probs=202.1
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~ 180 (574)
++-||.|+.|-||+|+ ..++.||||+++.- -..+|+-|++|. ||||+.|.++|..
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~el----------------------kETdIKHLRkLk-H~NII~FkGVCtq 183 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVREL----------------------KETDIKHLRKLK-HPNIITFKGVCTQ 183 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhh----------------------hhhhHHHHHhcc-CcceeeEeeeecC
Confidence 4569999999999996 56789999987532 235778899995 9999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
...+|||||||+.|.|+..| +....++......|..+|+.|+.|||.+.|||||||.-||||. .+..|||+|||-
T Consensus 184 sPcyCIiMEfCa~GqL~~VL--ka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGT 258 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVL--KAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGT 258 (904)
T ss_pred CceeEEeeeccccccHHHHH--hccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccc
Confidence 99999999999999999988 4557899999999999999999999999999999999999998 477999999999
Q ss_pred ccccCCCCCccccccCccccchHhhhcCC-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 261 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
++........-.++||..|||||++...+ +.|+|||||||||||||||..||.+.+...++--+=.+....+. ....
T Consensus 259 S~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv--Pstc 336 (904)
T KOG4721|consen 259 SKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV--PSTC 336 (904)
T ss_pred hHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC--cccC
Confidence 98776555556789999999999998776 89999999999999999999999777665544333333322222 2457
Q ss_pred CHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 340 SNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
|+-++=||+.||+-.|..|||+.++|.|-
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 78899999999999999999999999984
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=333.24 Aligned_cols=250 Identities=31% Similarity=0.549 Sum_probs=211.0
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||.|+||.||+|++..+++.||+|++.+... ......+.+.+|+.+++.+ +||||+++++.+.+++.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHI------------VETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcc------------hhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCc
Confidence 7999999999999998999999999876421 1122346789999999999 59999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
+|+|+||+++++|.+++.. ...+++..+..++.||+.||.|||+++++|+||+|+||+++ .++.++|+|||++..
T Consensus 68 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~~ 142 (262)
T cd05572 68 IYMLMEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAKK 142 (262)
T ss_pred cEEEEecCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCcccc
Confidence 9999999999999998843 35689999999999999999999999999999999999998 478999999999987
Q ss_pred cCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC--hhHHHHHHHhCCCCCCCCCCCCCC
Q 008197 264 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWPSIS 340 (574)
Q Consensus 264 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 340 (574)
...........|++.|+|||.+.. .++.++|+||+|+++|+|++|..||.... ....+..+.........+ +..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 220 (262)
T cd05572 143 LKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYID 220 (262)
T ss_pred cCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccC
Confidence 655443445688999999998754 45888999999999999999999997766 555666665322222221 2347
Q ss_pred HHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 341 NSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 341 ~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+++.++|.+||..+|.+||+ +.++++||||++.
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 89999999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=338.54 Aligned_cols=257 Identities=27% Similarity=0.479 Sum_probs=225.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|..+..||+|+||+|-+|..+.+...+|||++++..+. .....+--..|-++|.....-|.++++.
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVii------------QdDDvectm~EKrvLAL~~kppFL~qlH 416 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVII------------QDDDVECTMVEKRVLALPGKPPFLVQLH 416 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceee------------ecCcccceehhhhheecCCCCchHHHHH
Confidence 4688999999999999999999999999999999887431 1122334456777877665678899999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
.+|++-+.+|+||||+.||+|.-++ +.-+++.+..+..++..|+-||-+||++|||+||||.+||||++ .|+|||
T Consensus 417 ScFQTmDRLyFVMEyvnGGDLMyhi--QQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~---eGHiKi 491 (683)
T KOG0696|consen 417 SCFQTMDRLYFVMEYVNGGDLMYHI--QQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGHIKI 491 (683)
T ss_pred HHhhhhhheeeEEEEecCchhhhHH--HHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc---CCceEe
Confidence 9999999999999999999998877 56688999999999999999999999999999999999999994 899999
Q ss_pred Eeeccccc-cCCCCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~-~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+++. +-.+..+.+.||||.|+|||++. ..|+..+|+||+||+||||+.|.+||.+.++.++++.|......++
T Consensus 492 ~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP- 570 (683)
T KOG0696|consen 492 ADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP- 570 (683)
T ss_pred eecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc-
Confidence 99999975 34455667899999999999765 6678999999999999999999999999999999999999887776
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCH-----HHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~-----~~~l~hp~~~~~ 373 (574)
..+|.++.++++.+|.+.|.+|..+ .++-.||||+..
T Consensus 571 ---KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~i 612 (683)
T KOG0696|consen 571 ---KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRI 612 (683)
T ss_pred ---ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhc
Confidence 4689999999999999999999753 678899999874
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=298.23 Aligned_cols=258 Identities=26% Similarity=0.473 Sum_probs=215.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.-.++||+|.||+|++|+++.+++.||+|.++.... .+.-.....+|+.+|+.|. |.|||++++
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-------------degvpssalreicllkelk-hknivrl~d 68 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-------------DEGVPSSALREICLLKELK-HKNIVRLHD 68 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-------------CCCCcHHHHHHHHHHHHhh-hcceeehhh
Confidence 46677899999999999999999999999999876521 1122345789999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+...++.+-+|+|||. .+|..++ ..-++.+..+.++.++.|++.||.++|++++.||||||.|+||+ .+|.+||+
T Consensus 69 vlhsdkkltlvfe~cd-qdlkkyf-dslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin---~ngelkla 143 (292)
T KOG0662|consen 69 VLHSDKKLTLVFEFCD-QDLKKYF-DSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN---RNGELKLA 143 (292)
T ss_pred hhccCceeEEeHHHhh-HHHHHHH-HhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec---cCCcEEec
Confidence 9999999999999995 4665554 34567899999999999999999999999999999999999998 58999999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|||+|+...-.- -+...+.|.+|+||.++.+. |++..|+||.|||+.|+.. |++.|.+.+....+..|...-....
T Consensus 144 dfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ 223 (292)
T KOG0662|consen 144 DFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_pred ccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc
Confidence 999998765332 34566889999999998763 6889999999999999987 8888999988888888766433333
Q ss_pred CCCCC-------------------------CCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 333 RKPWP-------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 333 ~~~~~-------------------------~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
...|| .++..-+++++++|..+|.+|++++.+++||||...
T Consensus 224 ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 224 EDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred cccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 33333 233346899999999999999999999999999864
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=316.74 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=204.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+||++.+.||+|||+.||++....++..||+|++.... ....+...+|++..+++ +|||+++++
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---------------~~~~e~~~rEid~~rkf-~s~~vl~l~ 84 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---------------QEDIEEALREIDNHRKF-NSPNVLRLV 84 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---------------hHHHHHHHHHHHHHHhh-CCcchHHHH
Confidence 58999999999999999999999999999999998762 24567889999999999 699999998
Q ss_pred EEEEc-----CCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEcc
Q 008197 176 NAFED-----DNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKS 246 (574)
Q Consensus 176 ~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~ 246 (574)
++... ....||+++|+..|+|.+.+... ++..+++.++..|+.+|++||++||+.. ++||||||.|||+.
T Consensus 85 dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls- 163 (302)
T KOG2345|consen 85 DHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS- 163 (302)
T ss_pred HHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec-
Confidence 87643 34599999999999999988543 3457999999999999999999999998 99999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCCC----------ccccccCccccchHhhhcC----CCCCcchHhHHHHHHHHHhCCCCC
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKK----------FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~----------~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~Pf 312 (574)
+.+.++|+|||.+....-... ......|..|+|||++.-+ .++++|||||||+||.|+.|..||
T Consensus 164 --~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPf 241 (302)
T KOG2345|consen 164 --DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPF 241 (302)
T ss_pred --CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcc
Confidence 478999999999875431110 1123578899999998754 378999999999999999999999
Q ss_pred CCCCh--hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 313 WDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 313 ~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
...-. ..+.-.+..+...++.. +.+|+.+.+||+.||++||.+||++.+++.+
T Consensus 242 e~~~~~GgSlaLAv~n~q~s~P~~--~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 242 ERIYQQGGSLALAVQNAQISIPNS--SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred hHHhhcCCeEEEeeeccccccCCC--CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 43211 11222233334444433 3388999999999999999999999999863
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=333.29 Aligned_cols=263 Identities=27% Similarity=0.474 Sum_probs=212.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||.|+||.||+|.+..+|+.||||.+........ ..........+.+.+|+.+++.+ +||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~-----~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 75 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAG-----RHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLG 75 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhc-----ccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEE
Confidence 58889999999999999999988999999998864321100 00011112345788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+.+++||||+++++|.+++.. ...+++..+..++.||+.||.|||+++++||||+|+||+++ .++.++|+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~ 150 (272)
T cd06629 76 FETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKIS 150 (272)
T ss_pred EeccCCceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEe
Confidence 99999999999999999999998743 36799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC---CccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC--
Q 008197 257 DFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 328 (574)
Q Consensus 257 DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~-- 328 (574)
|||++....... ......|+..|+|||++... ++.++|+||||+++|+|++|..||...........+....
T Consensus 151 d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 230 (272)
T cd06629 151 DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA 230 (272)
T ss_pred eccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence 999987543211 12345688999999987643 5789999999999999999999997655544443333222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..++....+.++.++.++|.+||..+|.+|||+.++|+||||
T Consensus 231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 231 PPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 222223345678999999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=342.05 Aligned_cols=260 Identities=26% Similarity=0.415 Sum_probs=210.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++.+ +||||++++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~i~~~~ 72 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-------------RDGIPISSLREITLLLNL-RHPNIVELK 72 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-------------CCCCcchhhHHHHHHHhC-CCCCCcceE
Confidence 479999999999999999999999999999999865311 011122456799999999 599999999
Q ss_pred EEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++... +.+++||||+. ++|.+.+... ...+++..+..++.||+.||.|||+.|++||||||+||+++ .++.+
T Consensus 73 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~ 147 (309)
T cd07845 73 EVVVGKHLDSIFLVMEYCE-QDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCL 147 (309)
T ss_pred EEEecCCCCeEEEEEecCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCE
Confidence 998754 57899999996 4787776432 36789999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 254 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 254 kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
||+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..+......
T Consensus 148 kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~ 227 (309)
T cd07845 148 KIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGT 227 (309)
T ss_pred EECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999876533 22233456889999998864 3578999999999999999999999888877776666542111
Q ss_pred CCC-------------------CC-------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 331 FRR-------------------KP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 331 ~~~-------------------~~-------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... .. .+.+++.+.+||.+||..||++|||+.+++.||||+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 228 PNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred CChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence 000 00 123578899999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=340.20 Aligned_cols=259 Identities=23% Similarity=0.346 Sum_probs=207.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|...+.||+|+||.||++.+..+|+.||||.+..... ......+.+|+.++.++.+||||+++++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--------------~~~~~~~~~e~~~l~~~~~~~~iv~~~~ 70 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--------------EKEQKRLLMDLDVVMRSSDCPYIVKFYG 70 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--------------hHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 46678899999999999999999999999999875411 1234568899999999966999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHH---HHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCC
Q 008197 177 AFEDDNYVYIAMELCEGGELLD---RILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~---~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++..++..+++|||+.+ ++.+ .+.......+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.
T Consensus 71 ~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~ 146 (288)
T cd06616 71 ALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGN 146 (288)
T ss_pred EEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCc
Confidence 99999999999999854 5443 33333446799999999999999999999975 999999999999998 4778
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC----CCCCcchHhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~ 327 (574)
+||+|||++.............|++.|+|||++.+. ++.++|||||||++|+|++|+.||..... .+....+...
T Consensus 147 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 226 (288)
T cd06616 147 IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG 226 (288)
T ss_pred EEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC
Confidence 999999999765544433445789999999998654 68899999999999999999999965442 1222222222
Q ss_pred CC-CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 328 KP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 328 ~~-~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.. ......+..++.++.+||.+||..+|.+|||+.+++.||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 227 DPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred CCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 21 22222223578999999999999999999999999999999863
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=351.20 Aligned_cols=252 Identities=25% Similarity=0.325 Sum_probs=203.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCC-----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++.+.||+|+||.||+|++...| ..||||.+..... ....+.+.+|+.+++.+.+|||
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~E~~il~~l~~h~n 103 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--------------TDEREALMSELKILSHLGQHKN 103 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--------------HHHHHHHHHHHHHHHhhccCCc
Confidence 47999999999999999999865443 5799999875411 1234568899999999966999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------------------------------------------
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---------------------------------------------- 204 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------------------------------------------- 204 (574)
||++++++...+.+|+|||||++|+|.+++....
T Consensus 104 Iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (374)
T cd05106 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVE 183 (374)
T ss_pred eeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccc
Confidence 9999999999999999999999999999875421
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecccc
Q 008197 205 ----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262 (574)
Q Consensus 205 ----------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~ 262 (574)
..++++..++.++.||+.||.|||++||+||||||+|||++ +++.+||+|||++.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~ 260 (374)
T cd05106 184 MRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLAR 260 (374)
T ss_pred cCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeee
Confidence 13578899999999999999999999999999999999998 47889999999997
Q ss_pred ccCCCCCc---cccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCC
Q 008197 263 FIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337 (574)
Q Consensus 263 ~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 337 (574)
........ ....+++.|+|||++. ..++.++|||||||++|+|++ |+.||........+..+.........+ .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~--~ 338 (374)
T cd05106 261 DIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP--D 338 (374)
T ss_pred eccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCC--C
Confidence 65432221 1234567899999875 456899999999999999997 999998766555554554443222221 3
Q ss_pred CCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 338 SISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 338 ~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+++++.+++.+||..||.+|||+.++++
T Consensus 339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 339 FAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 46899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=330.88 Aligned_cols=252 Identities=29% Similarity=0.515 Sum_probs=211.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|++..+++.||+|.+.... ..+.+.+|+.+++.+ +||||++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----------------~~~~~~~e~~~~~~l-~~~~i~~~~ 64 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----------------DLQEIIKEISILKQC-DSPYIVKYY 64 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----------------HHHHHHHHHHHHHhC-CCCcEeeee
Confidence 57999999999999999999998889999999986541 146788999999999 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+...+|+++||+++++|.+.+.. ....+++..+..++.|++.||.|||+.+|+||||+|+||+++ .++.+||
T Consensus 65 ~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l 140 (256)
T cd06612 65 GSYFKNTDLWIVMEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKL 140 (256)
T ss_pred eeeecCCcEEEEEecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEE
Confidence 999999999999999999999987743 346789999999999999999999999999999999999998 4778999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++....... ......|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+...... ..
T Consensus 141 ~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~ 219 (256)
T cd06612 141 ADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TL 219 (256)
T ss_pred cccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CC
Confidence 9999998765433 23345689999999988654 578899999999999999999999776554443333222111 11
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.....++..+.++|.+||..+|.+|||+.++|.||||
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 1123467889999999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=332.75 Aligned_cols=257 Identities=28% Similarity=0.445 Sum_probs=209.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+ .+|+.+|||.+....... .........+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~---------~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNV---------LAAEKEYEKLQEEVDLLKSL-KHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccch---------hhHHHHHHHHHHHHHHHHhc-CCCCEeeEee
Confidence 478899999999999999986 578899999886532100 01112345688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+++|+||++|++|.+++.. ..++++..+..++.|++.||.|||+.+|+|+||+|+||+++ .++.++|+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~ 144 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLI 144 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEec
Confidence 99999999999999999999998843 35689999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCC-------CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 257 DFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 257 DFG~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
|||++..... ........|+..|+|||++.+. ++.++|||||||++|+|++|..||...........+....
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (265)
T cd06631 145 DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR 224 (265)
T ss_pred cchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc
Confidence 9999875421 1122345789999999988654 5789999999999999999999997765544444433322
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
... ......++.++.++|.+||..+|.+||++.++++||||
T Consensus 225 ~~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 225 GLM-PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CCC-CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 211 12224578899999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=339.66 Aligned_cols=256 Identities=28% Similarity=0.469 Sum_probs=209.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||.|+||.||+|++..+|+.||||.+..... .......+.+|+.+++++ +||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-------------TEGVPSTAIREISLLKEL-NHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-------------ccccchHHHHHHHHHHhc-CCCCCcchhh
Confidence 38899999999999999999999999999998865311 112235678999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+..++||||+. ++|.+++.......+++..+..++.||+.||.|||+.+++||||+|+||+++ .++.+||+
T Consensus 67 ~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~ 142 (284)
T cd07860 67 VIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLA 142 (284)
T ss_pred hcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEe
Confidence 9999999999999995 6888888665567799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC---
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD--- 330 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~--- 330 (574)
|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|+||+.||.+.+.......+......
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07860 143 DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 222 (284)
T ss_pred eccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999987654322 22344678999999987643 477899999999999999999999776654444333321110
Q ss_pred ---------------CCC-------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 331 ---------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 331 ---------------~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
++. ...+.+++++.++|.+||+.||.+|||+.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 223 VVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 000 0123567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=332.37 Aligned_cols=259 Identities=29% Similarity=0.497 Sum_probs=211.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+...||.|+||.||+|.+..+++.||+|.+......... +.......+.+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~------~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 73 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS------KDRKRSMLDALAREIALLKEL-QHENIVQYLG 73 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch------hHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEE
Confidence 477889999999999999999889999999988654211000 001112345788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++|++||||+|+||+++ .++.++|+
T Consensus 74 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~ 148 (267)
T cd06628 74 SSLDADHLNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKIS 148 (267)
T ss_pred EEEeCCccEEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEec
Confidence 99999999999999999999988843 36789999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCC-------CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 257 DFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 257 DFG~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
|||++....... ......|+..|+|||.+.+ .++.++|||||||++|+|++|+.||...........+....
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 228 (267)
T cd06628 149 DFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA 228 (267)
T ss_pred ccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC
Confidence 999987664211 1123468899999998865 45788999999999999999999998766555444443321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.......++..+.++|.+||+.+|.+||++.++++||||
T Consensus 229 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 ---SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ---CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 111224578899999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=334.27 Aligned_cols=248 Identities=25% Similarity=0.439 Sum_probs=198.4
Q ss_pred cceeecccc--cccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 96 RRYTIGKLL--GHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~l--G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.|.+.+.+ |.|+||.||++.++.++..+|+|.+..... . ..|+.+...+.+||||++
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~------------------~--~~e~~~~~~~~~h~~iv~ 73 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF------------------N--AIEPMVHQLMKDNPNFIK 73 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc------------------c--hhhHHHHHHhhcCCCEEE
Confidence 356666665 999999999999999999999999865311 0 012323333346999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC-C
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-S 252 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~-~ 252 (574)
+++.|..++.+|+||||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++ .
T Consensus 74 ~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~ 148 (267)
T PHA03390 74 LYYSVTTLKGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR---AKDR 148 (267)
T ss_pred EEEEEecCCeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC---CCCe
Confidence 999999999999999999999999988443 48999999999999999999999999999999999999984 44 8
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHH-HHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF-KEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~-~~i~~~~~~ 330 (574)
++|+|||++...... ....|+..|+|||++.+ .++.++||||+||++|+|++|+.||......... ..+.... .
T Consensus 149 ~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~ 224 (267)
T PHA03390 149 IYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-Q 224 (267)
T ss_pred EEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-c
Confidence 999999998765432 23468999999999865 4578899999999999999999999755433221 1121111 2
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCC-HHHHhcCccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVRE 372 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-~~~~l~hp~~~~ 372 (574)
.....++.+++.+.+||.+||+.+|.+||+ ++++|+||||+.
T Consensus 225 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 225 KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 222334568999999999999999999996 599999999973
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=338.98 Aligned_cols=263 Identities=30% Similarity=0.430 Sum_probs=212.5
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||.|+||.||+|.+..+|+.||||.+...... .........+..|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~----------~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~ 69 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERK----------EAKDGINFTALREIKLLQEL-KHPNIIGLLD 69 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccc----------cccchhhHHHHHHHHHHhhc-CCCCChhhhh
Confidence 488899999999999999999999999999999764210 00112334567899999999 4999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.++|+
T Consensus 70 ~~~~~~~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~ 144 (298)
T cd07841 70 VFGHKSNINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLA 144 (298)
T ss_pred eeecCCEEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEc
Confidence 999999999999999 899998874332 3799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 257 DFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 257 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
|||++...... .......+++.|+|||.+.+ .++.++|||||||++|+|++|.+||.+......+..+.........
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
T cd07841 145 DFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTE 224 (298)
T ss_pred cceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCch
Confidence 99999876543 22334467889999998854 3578899999999999999998888776655554444322100000
Q ss_pred ------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 334 ------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 334 ------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..+...+..+.+||.+||..+|++|||+.+++.||||++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 225 ENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred hhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 012345778999999999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=334.91 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=197.7
Q ss_pred cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHh--cCCCCcceEEEEEEc
Q 008197 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL--AGHENVVKFYNAFED 180 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l--~~hpniv~~~~~~~~ 180 (574)
.||+|+||.||++.+..+|+.||||.+.+..... ........+|..+++.+ .+||||+.+++++..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 68 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM------------KQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT 68 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEcccccc------------chHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec
Confidence 4899999999999999999999999987642110 01112233444333332 269999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
++..++||||++||+|.+++.. ...+++..+..++.||+.||.|||+.+|+||||||+|||++ .++.++|+|||+
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~ 143 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGL 143 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCc
Confidence 9999999999999999887743 35799999999999999999999999999999999999998 478999999999
Q ss_pred ccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 261 SDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 261 a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
+....... .....||+.|+|||.+.. .++.++||||+||++|+|++|..||........ ..+............+.
T Consensus 144 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 221 (279)
T cd05633 144 ACDFSKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDS 221 (279)
T ss_pred ceeccccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccc
Confidence 87554322 234579999999998853 358899999999999999999999965432111 11111111112222346
Q ss_pred CCHHHHHHHHHccccCCCCCC-----CHHHHhcCccccccC
Q 008197 339 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 374 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~~ 374 (574)
+++++.++|.+||..||.+|| |+.++++||||+...
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 789999999999999999999 699999999998743
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=331.05 Aligned_cols=256 Identities=28% Similarity=0.480 Sum_probs=206.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.+.+.||+|+||.||+|.+..+|..||+|.+..... ..........+.+|+.+++.+ +||||+++++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~----------~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 71 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPE----------SPETSKEVSALECEIQLLKNL-QHERIVQYYG 71 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcC----------CchhHHHHHHHHHHHHHHHHc-CCCCeeeEEE
Confidence 58899999999999999999999999999998865321 001112345788999999999 5999999999
Q ss_pred EEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.. ...+++++||+++++|.+.+.. ...+++..+..++.||+.||.|||+.+|+||||||+||+++ .++.+|
T Consensus 72 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~ 146 (266)
T cd06651 72 CLRDRAEKTLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVK 146 (266)
T ss_pred EEEcCCCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEE
Confidence 8875 4678999999999999988843 35689999999999999999999999999999999999998 477899
Q ss_pred EEeeccccccCCC----CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
|+|||++...... .......++..|+|||++.+. ++.++||||+||++|+|++|+.||...........+.....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~ 226 (266)
T cd06651 147 LGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT 226 (266)
T ss_pred EccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC
Confidence 9999998755321 112235688999999988654 57899999999999999999999977655444444333221
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
. ......+++.+.++| +||..+|++||++.++++||||+
T Consensus 227 ~--~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 N--PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred C--CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 1 111134678889998 57778999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=330.57 Aligned_cols=254 Identities=30% Similarity=0.494 Sum_probs=212.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+..++..+|+|++.... ......+.+|+.+++.+ +||||++++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~e~~~l~~~-~h~~i~~~~ 66 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---------------GDDFEIIQQEISMLKEC-RHPNIVAYF 66 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---------------hhhHHHHHHHHHHHHhC-CCCChhceE
Confidence 57999999999999999999998899999999987541 12346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+|++|||+++++|.+++... ...+++..+..++.|++.||.|||+++|+|+||+|+||+++ .++.+||
T Consensus 67 ~~~~~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l 142 (262)
T cd06613 67 GSYLRRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKL 142 (262)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEE
Confidence 9999999999999999999998876432 35799999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+|||++....... ......++..|+|||.+.+ .++.++|||||||++|+|++|+.||...........+......
T Consensus 143 ~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~ 222 (262)
T cd06613 143 ADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP 222 (262)
T ss_pred CccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Confidence 9999987654322 2345678999999998764 3577899999999999999999999887655554444443211
Q ss_pred CCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 331 FRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 331 ~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
... ...+.++.++.+||.+||..+|..|||+.+++.|||
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 223 PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 111 112345778999999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=349.94 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=203.5
Q ss_pred cceeecccccccCCeEEEEEEE-----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++++.||+|+||.||+|.+ ..++..||||++.... .....+.+.+|+.+|..+.+|||
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--------------~~~~~~~~~~Ei~il~~l~~Hpn 100 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--------------HLTEREALMSELKVLSYLGNHIN 100 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--------------CcHHHHHHHHHHHHHHHhcCCcc
Confidence 4799999999999999999974 3456789999986531 11234568899999999966999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------------------------------------------
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---------------------------------------------- 204 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------------------------------------------- 204 (574)
|+++++++...+..++|||||+||+|.+++....
T Consensus 101 Iv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 180 (375)
T cd05104 101 IVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVP 180 (375)
T ss_pred eeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccc
Confidence 9999999999999999999999999999885422
Q ss_pred ---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 205 ---------------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 205 ---------------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~D 257 (375)
T cd05104 181 TKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICD 257 (375)
T ss_pred cccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEec
Confidence 12478889999999999999999999999999999999998 477899999
Q ss_pred eccccccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 258 FGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 258 FG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
||++......... ....++..|+|||++.+ .++.++|||||||++|+|++ |..||............+.......
T Consensus 258 fG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~ 337 (375)
T cd05104 258 FGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML 337 (375)
T ss_pred CccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC
Confidence 9999765433221 12345667999998865 46889999999999999998 8999977655444444444332211
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.....+.++.+||.+||..||++|||+.++++.
T Consensus 338 --~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 338 --SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 123467899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=338.96 Aligned_cols=261 Identities=32% Similarity=0.563 Sum_probs=215.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.+ +||||+++
T Consensus 21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~ii~~ 84 (292)
T cd06658 21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---------------QQRRELLFNEVVIMRDY-HHENVVDM 84 (292)
T ss_pred HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---------------HHHHHHHHHHHHHHHhC-CCCcHHHH
Confidence 345666788999999999999998899999999885431 12345688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.+...+..|+||||+++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~k 158 (292)
T cd06658 85 YNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIK 158 (292)
T ss_pred HHheecCCeEEEEEeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEE
Confidence 999999999999999999999988763 24689999999999999999999999999999999999998 468899
Q ss_pred EEeeccccccCCC-CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++...... .......|++.|+|||++.+ .++.++|||||||++|+|++|+.||...........+...... .
T Consensus 159 L~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-~ 237 (292)
T cd06658 159 LSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-R 237 (292)
T ss_pred EccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-c
Confidence 9999998754322 22234578999999998865 4588999999999999999999999877665555544432211 1
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~ 378 (574)
......++..+.++|.+||..+|.+|||+.++++||||+.....+.
T Consensus 238 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 238 VKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred cccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence 1122346888999999999999999999999999999997765553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=328.78 Aligned_cols=249 Identities=28% Similarity=0.508 Sum_probs=212.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||++.+..+++.||+|.+..... ....+.+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--------------SSAVEDSRKEAVLLAKM-KHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--------------hHHHHHHHHHHHHHHhC-CCCCcceEEE
Confidence 48899999999999999999999999999999864311 12345678899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+.+.+.+|+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++ .++.++|+
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~~l~ 142 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKVKLG 142 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcEEEc
Confidence 999999999999999999999988665566789999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++....... ......|++.|+|||++.+. ++.++|+||||+++|+|++|..||...+.......+..+.....
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 220 (255)
T cd08219 143 DFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL-- 220 (255)
T ss_pred ccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC--
Confidence 999987654322 22346799999999998654 58899999999999999999999988776666666655443221
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...++..+.+||.+||..||.+|||+.+++.
T Consensus 221 -~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 221 -PSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred -CcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 2357788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=332.91 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=208.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|+..+.||+|+||.||+|.+..+++.||+|++...... ..........+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~---------~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~ 70 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT---------SSEQEEVVEALRKEIRLMARL-NHPHIIRMLG 70 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCC---------chhHHHHHHHHHHHHHHHHHc-CCCceehhhc
Confidence 378889999999999999999999999999998653210 000112356789999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+++|+||++|++|.+.+.. ..++++..+..++.||+.||.|||++|++|+||+|+||+++. .+..+||+
T Consensus 71 ~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~~~~~l~ 146 (268)
T cd06630 71 ATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TGQRLRIA 146 (268)
T ss_pred eeccCCeEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEc
Confidence 99999999999999999999988743 457899999999999999999999999999999999999974 23469999
Q ss_pred eeccccccCCCC-----CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-
Q 008197 257 DFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP- 329 (574)
Q Consensus 257 DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~- 329 (574)
|||++....... ......||..|+|||++.+ .++.++||||+||++|+|++|..||...........+.....
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (268)
T cd06630 147 DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA 226 (268)
T ss_pred ccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc
Confidence 999987654321 1123578899999998865 457899999999999999999999965443222222221111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
.......+.+++++.+++.+||..+|.+||++.++++||||+
T Consensus 227 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 111112235788999999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=336.32 Aligned_cols=255 Identities=27% Similarity=0.448 Sum_probs=203.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.++.+++.||||.+..... ......+.+|+.+++.+ +||||++++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~~i~~~~ 69 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--------------EGAPFTAIREASLLKDL-KHANIVTLH 69 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--------------cCCchhHHHHHHHHhhC-CCcceeeEE
Confidence 579999999999999999999998999999999865410 01123456899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+..|+||||+.+ +|.+++... ...+++..++.++.||+.||.|||+++|+||||||+||+++ .++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl 144 (291)
T cd07844 70 DIIHTKKTLTLVFEYLDT-DLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKL 144 (291)
T ss_pred EEEecCCeEEEEEecCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEE
Confidence 999999999999999975 898877543 34789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCCCC-
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPD- 330 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~-~~~~~~~i~~~~~~- 330 (574)
+|||++...... .......++..|+|||++.+ .++.++||||+||++|+|++|+.||.+.. ..+....+......
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
T cd07844 145 ADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTP 224 (291)
T ss_pred CccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCC
Confidence 999998754321 12233457889999998864 35788999999999999999999997654 22222222110000
Q ss_pred ------------------CC-------CCCCCCCC--HHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 331 ------------------FR-------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 331 ------------------~~-------~~~~~~~~--~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
+. ...++.++ ..+.++|.+||+.+|.+|||+.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 225 TEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00 00112344 788999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=338.00 Aligned_cols=256 Identities=27% Similarity=0.475 Sum_probs=208.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+..+++.||+|.+..... .....+.+.+|+.+++.+ +||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-------------DKMVKKIAMREIRMLKQL-RHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-------------cchhhHHHHHHHHHHHhc-CCcchhhHH
Confidence 368999999999999999999988999999998765311 112345678899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++..|+|+||+++++|..... ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.++|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l 141 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKL 141 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEE
Confidence 99999999999999999888776542 334589999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC-
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF- 331 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~- 331 (574)
+|||++...... .......++..|+|||++.+ .++.++|||||||++|+|++|++||......+....+......+
T Consensus 142 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 221 (286)
T cd07846 142 CDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLI 221 (286)
T ss_pred EeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCc
Confidence 999998765433 22344678999999998864 34788999999999999999999997665544433333211100
Q ss_pred ------------------C--------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 332 ------------------R--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 332 ------------------~--------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
+ ...++.++..+.+|+.+||..+|.+||++.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 222 PRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0 01134678899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=329.17 Aligned_cols=257 Identities=27% Similarity=0.492 Sum_probs=207.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|++.+.||+|+||.||+|.+..+|..||||.+..... ........+.+.+|+.+++.+ +||||++++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~----------~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~ 70 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPE----------SPETSKEVNALECEIQLLKNL-LHERIVQYY 70 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcC----------CcccHHHHHHHHHHHHHHHhc-CCCCeeeEE
Confidence 368999999999999999999999999999998864311 001112356788999999999 599999999
Q ss_pred EEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++.+ ...+++||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+|+|+||||+||+++ .++.+
T Consensus 71 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~ 145 (265)
T cd06652 71 GCLRDPMERTLSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNV 145 (265)
T ss_pred eEeccCCCceEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCE
Confidence 99876 4578999999999999988743 35689999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC----CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 254 KATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 254 kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|+|||++...... .......|+..|+|||++.+ ..+.++|||||||++|+|++|+.||...........+....
T Consensus 146 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 225 (265)
T cd06652 146 KLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP 225 (265)
T ss_pred EECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC
Confidence 99999998754321 12234578999999998764 45789999999999999999999997765544444443322
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
.. ....+.++..+.++|.+||. +|++||++.++++|||+.
T Consensus 226 ~~--~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 226 TN--PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred CC--CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 11 11123567889999999995 899999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=332.70 Aligned_cols=255 Identities=28% Similarity=0.449 Sum_probs=210.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.++.+++.||+|.+.... .......+.+|+++++.+. ||||+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~e~~~l~~~~-~~~i~~~~~ 66 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--------------NEAIQKQILRELDILHKCN-SPYIVGFYG 66 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--------------ChHHHHHHHHHHHHHHHCC-CCchhhhhe
Confidence 5888999999999999999999999999999987642 1234567889999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
.+...+.+++|+||+++++|.+++.... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++ .++.++|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l 142 (265)
T cd06605 67 AFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKL 142 (265)
T ss_pred eeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEE
Confidence 9999999999999999999998775432 678999999999999999999999 9999999999999998 4788999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHHhCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLRNKP 329 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~-----~~~~~~~i~~~~~ 329 (574)
+|||.+........ ....|+..|+|||++.+. ++.++|||||||++|+|++|..||.... .......+.....
T Consensus 143 ~d~g~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
T cd06605 143 CDFGVSGQLVNSLA-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP 221 (265)
T ss_pred eecccchhhHHHHh-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC
Confidence 99999876543222 226789999999988654 5788999999999999999999996542 2223333333221
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
. ..+...++.++.++|.+||..+|.+|||+.+++.||||+..
T Consensus 222 ~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 222 P--RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred C--CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 1 11111278899999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=344.28 Aligned_cols=260 Identities=30% Similarity=0.487 Sum_probs=206.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|++..+|+.||||.+.... .......+.+|+.+++.+. ||||++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~-h~niv~ 67 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--------------HQTFCQRTLREIKILRRFK-HENIIG 67 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--------------cchhHHHHHHHHHHHHhCC-CCCcCc
Confidence 4468999999999999999999999999999999985421 0123456778999999994 999999
Q ss_pred EEEEEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++... ...|+|+||+. ++|.+.+ ....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~---~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~--- 140 (336)
T cd07849 68 ILDIIRPPSFESFNDVYIVQELME-TDLYKLI---KTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--- 140 (336)
T ss_pred hhheeecccccccceEEEEehhcc-cCHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---
Confidence 99987643 46899999996 4777766 235799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCC----ccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
.++.+||+|||++........ ....+||+.|+|||.+.+ .++.++|||||||++|+|++|+.||.+........
T Consensus 141 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~ 220 (336)
T cd07849 141 TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLN 220 (336)
T ss_pred CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 478999999999876533221 234578999999998653 46889999999999999999999997665433222
Q ss_pred HHHhC-----------------------CCCCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 323 EVLRN-----------------------KPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 323 ~i~~~-----------------------~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.+... .+..... ..+.+++++.+||.+||+.+|.+|||+.++++||||+....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 221 LILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 22110 0000000 12456788999999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=345.91 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=206.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++.+ +||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-------------NVTHAKRAYRELVLMKLV-NHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-------------ChhHHHHHHHHHHHHHhc-CCCCCcc
Confidence 45689999999999999999999999999999998864310 112345677899999999 5999999
Q ss_pred EEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
++++|... ...|+||||+. ++|.+.+.. .+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~-- 152 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-- 152 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC--
Confidence 99998643 35799999995 588877632 289999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||...+....+..+..
T Consensus 153 -~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 231 (353)
T cd07850 153 -SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIE 231 (353)
T ss_pred -CCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 478899999999987655444445678999999998865 468899999999999999999999977665444433322
Q ss_pred CC----------------------CCCCCC---------C--------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NK----------------------PDFRRK---------P--------WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~----------------------~~~~~~---------~--------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.. +..... . ....++.+.+||.+||..||++|||+.++|.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10 000000 0 11235678999999999999999999999999
Q ss_pred cccccc
Q 008197 368 PWVREG 373 (574)
Q Consensus 368 p~~~~~ 373 (574)
|||+.-
T Consensus 312 ~~~~~~ 317 (353)
T cd07850 312 PYINVW 317 (353)
T ss_pred hhHhhc
Confidence 999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=327.64 Aligned_cols=254 Identities=33% Similarity=0.546 Sum_probs=211.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~~~~l-~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-------------DPKTIKEIADEMKVLELL-KHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-------------chHHHHHHHHHHHHHHhC-CCCChhheee
Confidence 58899999999999999999988999999999876421 123567889999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+...+.+++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.+||+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~ 141 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLG 141 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEc
Confidence 99999999999999999999998743 35689999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCC-----ccccccCccccchHhhhcC----CCCCcchHhHHHHHHHHHhCCCCCCCCChhH-HHHHHHh
Q 008197 257 DFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLR 326 (574)
Q Consensus 257 DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~ 326 (574)
|||++........ .....+++.|+|||++.+. .+.++||||||+++|+|++|+.||....... ....+..
T Consensus 142 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 221 (264)
T cd06626 142 DFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA 221 (264)
T ss_pred ccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc
Confidence 9999876543222 2235788999999998653 4788999999999999999999997653322 2222222
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
......+.+..+++.+.+||.+||+.+|.+|||+.+++.|||+
T Consensus 222 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 222 -GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred -CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 2222223344568899999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=337.15 Aligned_cols=256 Identities=29% Similarity=0.450 Sum_probs=208.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++.+.||.|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+. ||||++++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l~-h~ni~~~~ 70 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE-------------KEGFPITSLREINILLKLQ-HPNIVTVK 70 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc-------------cccchhhHHHHHHHHHhcC-CCCEEEEE
Confidence 369999999999999999999999999999999875421 0112335678999999995 99999999
Q ss_pred EEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++... +.+|+||||+. ++|.+.+... ...+++..++.++.||+.||.|||+.||+||||||+||+++ .++.+
T Consensus 71 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~ 145 (293)
T cd07843 71 EVVVGSNLDKIYMVMEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGIL 145 (293)
T ss_pred EEEEecCCCcEEEEehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcE
Confidence 998877 89999999997 4888876443 34689999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 254 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 254 kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
||+|||++...... .......+++.|+|||++.+. .+.++||||||+++|+|++|.+||...........+......
T Consensus 146 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~ 225 (293)
T cd07843 146 KICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGT 225 (293)
T ss_pred EEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 99999998866543 333445788999999988653 478899999999999999999999877665555444321110
Q ss_pred C--------------------------CCCCCCC--CCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 331 F--------------------------RRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 331 ~--------------------------~~~~~~~--~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
. ....++. +++.+.++|.+||..+|++|||+.++|.||||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 226 PTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred CchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0 0011222 47889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=327.79 Aligned_cols=255 Identities=26% Similarity=0.517 Sum_probs=214.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||.|+||.||+|.++.+|..||+|.+..... .....+.+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~E~~~l~~~-~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-------------PVKEKEASKKEVILLAKM-KHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-------------cchhhHHHHHHHHHHHhC-CCCChhhhhh
Confidence 48899999999999999999999999999999865311 112345678999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+...+..|+|+||+++++|.+++.......+++..+..++.||+.||.|||+.+++|+||||+||+++. ....+||+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~ 144 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLG 144 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEec
Confidence 9999999999999999999999886655556899999999999999999999999999999999999984 23467999
Q ss_pred eeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||.+........ .....|++.|+|||++.. .++.++|+|||||++|+|++|..||...+.......+...... .
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~ 221 (257)
T cd08225 145 DFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA---P 221 (257)
T ss_pred ccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC---C
Confidence 9999876644332 233568999999998764 4688999999999999999999999877666666555544322 1
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+.++..+.++|.+||..+|++|||+.+++.||||
T Consensus 222 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 222 ISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 224578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-42 Score=343.00 Aligned_cols=258 Identities=30% Similarity=0.505 Sum_probs=219.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
-|..++.||-|+||+|.+++...|...||+|.+++...+.+ ..+..+..|-+||..- +.+.||+||-
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~r------------nQvaHVKAERDILAEA-Dn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMR------------NQVAHVKAERDILAEA-DNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhh------------hhhhhhhhhhhhHhhc-CCcceEEEEE
Confidence 48889999999999999999888999999999998765444 3566788999999988 6999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.|++.+.+|+||+|++||++..+|++. +-|.+..++.++..+.+|+++.|..|+|||||||+||||| .+|+|||+
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID---rdGHIKLT 771 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLT 771 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc---cCCceeee
Confidence 999999999999999999999988654 7799999999999999999999999999999999999999 58999999
Q ss_pred eecccccc---------CCCCC----------------------------------ccccccCccccchHhhhc-CCCCC
Q 008197 257 DFGLSDFI---------KPGKK----------------------------------FQDIVGSAYYVAPEVLKR-KSGPE 292 (574)
Q Consensus 257 DFG~a~~~---------~~~~~----------------------------------~~~~~gt~~y~aPE~~~~-~~~~~ 292 (574)
||||+.-+ ..+.. ....+||+.|+|||++.. .++.-
T Consensus 772 DFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~ 851 (1034)
T KOG0608|consen 772 DFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQL 851 (1034)
T ss_pred eccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcccc
Confidence 99998422 11100 012589999999998864 57888
Q ss_pred cchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHHHhcCcc
Q 008197 293 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPW 369 (574)
Q Consensus 293 ~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~~l~hp~ 369 (574)
+|+||.|||||||+.|++||.+.+..+...++++-..-.......++|+++.++|.++.+ +++.|.. ++++..|||
T Consensus 852 cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpf 930 (1034)
T KOG0608|consen 852 CDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPF 930 (1034)
T ss_pred chhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcc
Confidence 999999999999999999999988877766666544433444456799999999998765 6888984 778999999
Q ss_pred cccc
Q 008197 370 VREG 373 (574)
Q Consensus 370 ~~~~ 373 (574)
|+..
T Consensus 931 FkgI 934 (1034)
T KOG0608|consen 931 FKGI 934 (1034)
T ss_pred cccc
Confidence 9974
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-41 Score=342.94 Aligned_cols=261 Identities=30% Similarity=0.454 Sum_probs=209.0
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.+.+.||.|+||.||+|++..+|..||||.+.... ........+.+|+.+++.+ +||||++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAF-------------DNRIDAKRTLREIKLLRHL-DHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccc-------------cccchhHHHHHHHHHHHhc-CCCCccc
Confidence 3468999999999999999999999999999999986531 0112334567899999999 5999999
Q ss_pred EEEEEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++... ..+|+|+||+. ++|.+.+. ...++++..+..++.||+.||.|||+++++||||||+||+++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~--- 142 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN--- 142 (337)
T ss_pred hHHheecccccccCcEEEEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---
Confidence 99988653 35899999995 68888773 346799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++...... .......|+..|+|||.+.. .++.++|||||||++|+|++|++||.+.+.......+.
T Consensus 143 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 222 (337)
T cd07858 143 ANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLIT 222 (337)
T ss_pred CCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHH
Confidence 4788999999999866433 22334578999999998753 46889999999999999999999997654333222221
Q ss_pred h-----------------------CCCCCC----CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 R-----------------------NKPDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~-----------------------~~~~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
. ...... ...++.+++++.+||.+||+.+|.+|||+.++++||||....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 223 ELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred HHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 1 000000 011356789999999999999999999999999999997643
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=326.26 Aligned_cols=256 Identities=30% Similarity=0.486 Sum_probs=212.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|+..+.||.|+||.||+|.+..++..||+|.+..... ..........+.+|+.+++.+ +||||+++++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----------~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~ 69 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADD----------GQTGQEAVKQLEQEIALLSKL-QHPNIVQYLG 69 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccc----------cccchHHHHHHHHHHHHHHhc-CCCCchheee
Confidence 47788999999999999999988999999999865311 011123456788999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+...+|+|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++ .++.+||+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~ 144 (258)
T cd06632 70 TEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLA 144 (258)
T ss_pred eEecCCeEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEc
Confidence 99999999999999999999988743 35689999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++.............|++.|+|||.+... ++.++|+|||||++|+|++|+.||...........+.... . ...
T Consensus 145 d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~-~~~ 222 (258)
T cd06632 145 DFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-E-LPP 222 (258)
T ss_pred cCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-c-CCC
Confidence 99998876544434556799999999987543 6888999999999999999999997765444444433311 1 111
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+.+++.+.+++.+||..+|.+||++.+++.|||+
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 224578999999999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=335.31 Aligned_cols=252 Identities=22% Similarity=0.269 Sum_probs=200.4
Q ss_pred cceeecccccccCCeEEEEEEEcC----------------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHH
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 159 (574)
++|++.+.||+|+||.||+|.+.. ++..||||.+.... .......+.+|+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~ 70 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--------------NKNARNDFLKEV 70 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--------------CHHHHHHHHHHH
Confidence 579999999999999999997532 34579999886531 122345788999
Q ss_pred HHHHHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc-----------------CCCCCHHHHHHHHHHHHH
Q 008197 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-----------------DSRYTEKDAAVVVRQMLR 222 (574)
Q Consensus 160 ~il~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~ 222 (574)
.++..+ +||||+++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.||+.
T Consensus 71 ~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 149 (304)
T cd05096 71 KILSRL-KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIAS 149 (304)
T ss_pred HHHhhc-CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 999999 59999999999999999999999999999998874321 124678889999999999
Q ss_pred HHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhH
Q 008197 223 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSI 298 (574)
Q Consensus 223 ~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSl 298 (574)
||.|||++||+||||||+|||++ .++.+||+|||++........ .....++..|+|||++. +.++.++|||||
T Consensus 150 al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 226 (304)
T cd05096 150 GMKYLSSLNFVHRDLATRNCLVG---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAF 226 (304)
T ss_pred HHHHHHHCCccccCcchhheEEc---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHH
Confidence 99999999999999999999998 478999999999976543321 22345678899999875 456889999999
Q ss_pred HHHHHHHHh--CCCCCCCCChhHHHHHHHhC---C-CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHh
Q 008197 299 GVITYILLC--GRRPFWDKTEDGIFKEVLRN---K-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365 (574)
Q Consensus 299 G~il~ellt--g~~Pf~~~~~~~~~~~i~~~---~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l 365 (574)
||++|+|++ +..||...+.......+... . ........+.+++.+.+|+.+||..+|.+|||+.++.
T Consensus 227 G~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 227 GVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred HHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 999999986 67788776665555443221 1 1111112245788999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=331.98 Aligned_cols=257 Identities=25% Similarity=0.370 Sum_probs=211.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.+ +||||++++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~i~~~~ 69 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--------------KSSVRKQILRELQIMHEC-RSPYIVSFY 69 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--------------cchHHHHHHHHHHHHHHc-CCCCcceEe
Confidence 46999999999999999999999999999999876431 122346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++...+.+++||||+++++|.+++.. .+.+++..+..++.+++.||.|||+ ++++||||||+||+++ .++.++
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~ 144 (284)
T cd06620 70 GAFLNENNICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIK 144 (284)
T ss_pred eeEecCCEEEEEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEE
Confidence 999999999999999999999887743 4578999999999999999999997 6999999999999998 478899
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCChh-----------HHHH
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------GIFK 322 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-----------~~~~ 322 (574)
|+|||++...... .....+||..|+|||++. +.++.++|||||||++|+|++|+.||...... ....
T Consensus 145 l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd06620 145 LCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ 223 (284)
T ss_pred EccCCcccchhhh-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHH
Confidence 9999998654322 223458999999999875 45688999999999999999999999765432 2233
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 323 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.+..... +......++..+.+|+.+||..||.+|||+.++++||||.+...
T Consensus 224 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 224 QIVQEPP--PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred HHhhccC--CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 3332221 11112237788999999999999999999999999999977543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=332.35 Aligned_cols=255 Identities=26% Similarity=0.488 Sum_probs=208.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|++|.||+|++..+|..||||++..... ....+.+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--------------EGTPSTAIREISLMKEL-KHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--------------ccchHHHHHHHHHHHhh-cCCCEeeeee
Confidence 48899999999999999999999999999999875411 12235567899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++.+.+..++||||+++ +|.+++.... ...+++..+..++.||+.||.|||+.||+||||||+||+++ .++.++|
T Consensus 66 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l 141 (284)
T cd07836 66 VIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKL 141 (284)
T ss_pred eEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEE
Confidence 99999999999999975 8888774432 24689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC---
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--- 329 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~--- 329 (574)
+|||++...... .......+|+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 142 ~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07836 142 ADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPT 221 (284)
T ss_pred eecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Confidence 999999755332 222345688999999988653 47889999999999999999999988776655554432210
Q ss_pred -----------CC----CC-------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 330 -----------DF----RR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 330 -----------~~----~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.+ +. ...+..+..+.++|.+||+.||.+||++.++++||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 222 ESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00 00 0013457789999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=326.46 Aligned_cols=254 Identities=28% Similarity=0.504 Sum_probs=213.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|.+..+|..||+|.+.... ......+.+..|+.+++.+ +||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN-------------MTEKEKQQLVSEVNILREL-KHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEeccc-------------CCHHHHHHHHHHHHHHHhc-CCCccceeee
Confidence 4889999999999999999999999999999886532 1123456788999999999 5999999999
Q ss_pred EEEc--CCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCEeecCCCCcEEEccC
Q 008197 177 AFED--DNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECH-----LHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 177 ~~~~--~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH-----~~~iiHrDlkp~Nill~~~ 247 (574)
++.. +..+|++|||+++++|.+++... ...++++..+..++.||+.||.||| +.+|+|+||+|+||+++
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~-- 144 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD-- 144 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe--
Confidence 8754 56789999999999999888543 2467899999999999999999999 89999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++........ .....|++.|+|||++.+. ++.++||||||+++|+|++|..||...........+.
T Consensus 145 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 223 (265)
T cd08217 145 -ANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK 223 (265)
T ss_pred -cCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh
Confidence 478999999999987654443 3456799999999988654 5788999999999999999999998877666666555
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..... .....++..+.+++.+||..+|.+||++.++++|||+
T Consensus 224 ~~~~~---~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 224 EGKFR---RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred cCCCC---CCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 44322 1123577899999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=330.24 Aligned_cols=256 Identities=28% Similarity=0.507 Sum_probs=211.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcceE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVVKF 174 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv~~ 174 (574)
.|++.+.||.|+||.||+|.+..+++.||||.+.... .....+.+.+|+.+++.+. .|||++++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--------------~~~~~~~~~~e~~~l~~l~~~~~~~vi~~ 67 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--------------PDDDVSDIQREVALLSQLRQSQPPNITKY 67 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--------------CchhHHHHHHHHHHHHHhccCCCCCeeeE
Confidence 4788899999999999999999999999999886531 1223456889999999985 49999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++..+..+|+||||++|++|.+++.. ..+++..+..++.|++.||.|||+.||+||||+|+||+++. ++.++
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~---~~~~~ 141 (277)
T cd06917 68 YGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN---TGNVK 141 (277)
T ss_pred eeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC---CCCEE
Confidence 9999999999999999999999887632 47899999999999999999999999999999999999984 78999
Q ss_pred EEeeccccccCCCC-CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 255 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 255 l~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
|+|||++....... ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||.+.........+... ..
T Consensus 142 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~ 219 (277)
T cd06917 142 LCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KP 219 (277)
T ss_pred EccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CC
Confidence 99999997765432 2334579999999998864 2478999999999999999999999776554433322221 11
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+......++.++.+++.+||..||.+||++.+++.||||++..
T Consensus 220 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 220 PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 1111223778999999999999999999999999999998754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=334.02 Aligned_cols=255 Identities=32% Similarity=0.536 Sum_probs=207.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|.+..+++.||||.+.... ......+.+.+|+.+++.+. ||||+++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-------------~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~ 67 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-------------DDEDVKKTALREVKVLRQLR-HENIVNLKE 67 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-------------ccccchhHHHHHHHHHHhcC-CCCeeehhh
Confidence 6999999999999999999999999999999886531 11223467889999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++..++.+++||||++++.+.. +. .....+++..+..++.||+.||.|||+++++||||+|+||+++ .++.+||+
T Consensus 68 ~~~~~~~~~iv~e~~~~~~l~~-~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~ 142 (288)
T cd07833 68 AFRRKGRLYLVFEYVERTLLEL-LE-ASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLC 142 (288)
T ss_pred eEEECCEEEEEEecCCCCHHHH-HH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEE
Confidence 9999999999999998765544 33 2345689999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC--CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC----
Q 008197 257 DFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---- 328 (574)
Q Consensus 257 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~---- 328 (574)
|||++....... ......++..|+|||++.+. ++.++||||||+++|+|++|++||.+....+....+....
T Consensus 143 d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 222 (288)
T cd07833 143 DFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLP 222 (288)
T ss_pred eeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999998765443 33456789999999988654 4789999999999999999999997765544333222110
Q ss_pred ----------CCCC-----CC--------CCC-CCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 ----------PDFR-----RK--------PWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ----------~~~~-----~~--------~~~-~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+. .. .++ .++.++.+||++||..+|++|||+.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 223 PSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 00 011 247889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=332.09 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=208.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCC-----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..+ +|||
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--------------~~~~~~~~~~ei~~l~~l-~h~~ 69 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--------------EPKVQQEFRQEAELMSDL-QHPN 69 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--------------CHHHHHHHHHHHHHHHhc-CCcc
Confidence 36899999999999999999876554 689999886431 122345688999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrD 236 (574)
|+++++++...+..|++|||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+|||
T Consensus 70 i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~d 149 (283)
T cd05048 70 IVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRD 149 (283)
T ss_pred cceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 99999999999999999999999999998854321 4588999999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCC
Q 008197 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRP 311 (574)
Q Consensus 237 lkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~P 311 (574)
|||+||+++ .++.+||+|||++....... ......+++.|+|||.+. +.++.++|||||||++|||++ |..|
T Consensus 150 lkp~Nil~~---~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p 226 (283)
T cd05048 150 LAARNCLVG---EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226 (283)
T ss_pred cccceEEEc---CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence 999999998 47889999999997653322 123456788999999875 456889999999999999998 9999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
|.+....++...+....... ....+|+++.+|+.+||+.||.+||++.+++++
T Consensus 227 ~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 227 YYGFSNQEVIEMIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99888777777666543221 124678999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=344.43 Aligned_cols=258 Identities=29% Similarity=0.488 Sum_probs=229.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+++++..||-|+||.|-++........+|+|++++..+. .....+.+..|-+||.... .|.||++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV------------dtkQqeHv~sEr~Im~~~~-s~fIvrLY 486 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV------------DTKQQEHVFSERNIMMECR-SDFIVRLY 486 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc------------chhHHHHHHhHHHHHHhcC-chHHHHHH
Confidence 3567788999999999999986655556999999887432 2235678999999999995 99999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
..|.+..++|++||-|-||.|+..+ ...+.|....++.++..+++|++|||++|||+|||||+|++++ .+|-+||
T Consensus 487 rTfrd~kyvYmLmEaClGGElWTiL--rdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd---~~Gy~KL 561 (732)
T KOG0614|consen 487 RTFRDSKYVYMLMEACLGGELWTIL--RDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD---NRGYLKL 561 (732)
T ss_pred HHhccchhhhhhHHhhcCchhhhhh--hhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec---cCCceEE
Confidence 9999999999999999999999987 4557899999999999999999999999999999999999999 5899999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
.|||+|+.+..+..+.++||||.|.|||++. .....++|.||||+++|||++|.+||.+.++...+..|+++...+..+
T Consensus 562 VDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P 641 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP 641 (732)
T ss_pred eehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc
Confidence 9999999999999999999999999999765 456889999999999999999999999999999999999986544333
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
..++..+.+||+++...+|..|.. +.+|-.|.||..-
T Consensus 642 --r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 642 --RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred --cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 357889999999999999999986 7899999999753
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=335.03 Aligned_cols=254 Identities=28% Similarity=0.462 Sum_probs=211.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++.+.||.|+||.||+|.+..++..||+|.+..... ....+.+.+|+.+++.+ +||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--------------EDEIEDIQQEITVLSQC-DSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--------------hHHHHHHHHHHHHHHcC-CCCccHhhh
Confidence 458889999999999999999999999999998864311 12345788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++.+|+||||+++++|.+++. ...+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l 142 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKL 142 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEE
Confidence 99999999999999999999988773 35689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++........ .....|+..|+|||++.+. ++.++|||||||++|+|++|+.||...........+..... .
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~ 219 (277)
T cd06642 143 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP---P 219 (277)
T ss_pred ccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCC---C
Confidence 99999976543322 2234688999999998654 57899999999999999999999976655444443332221 1
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
......+.++.++|.+||..+|.+||++.++++||||...
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 220 TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 1113467889999999999999999999999999999764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=329.69 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=212.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+-|++.+.||.|+||.||+|.+..++..||||.+..... ......+.+|+.+++.+ +||||++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~iv~~~ 68 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--------------EDEIEDIQQEITVLSQC-DSPYVTKYY 68 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--------------hHHHHHHHHHHHHHHhc-CCCCEeEEE
Confidence 357889999999999999999988999999998764311 12345788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++.+|+||||+++++|.+++. ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++ .++.++|
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l 142 (277)
T cd06641 69 GSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKL 142 (277)
T ss_pred EEEEeCCeEEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEE
Confidence 99999999999999999999998773 34689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++....... ......|+..|+|||.+.+ ..+.++|+|||||++|+|++|..||...........+......
T Consensus 143 ~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 219 (277)
T cd06641 143 ADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP--- 219 (277)
T ss_pred eecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---
Confidence 9999987654322 1234578999999998865 4578899999999999999999999776655555544333211
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.....++.++.++|.+||..+|.+||++.++++||||.+.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 220 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 1123578899999999999999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=336.15 Aligned_cols=256 Identities=29% Similarity=0.439 Sum_probs=201.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+ .||||++++
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~iv~~~ 77 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-------------KEGFPITALREIKILQLL-KHENVVNLI 77 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-------------cCCchhHHHHHHHHHHhC-CCCCccceE
Confidence 469999999999999999999999999999998864310 011223456899999999 599999999
Q ss_pred EEEEcCC--------EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 176 NAFEDDN--------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 176 ~~~~~~~--------~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++...+ ..++||||+. ++|.+.+.. ....+++..+..++.||+.||.|||++|++|+||||+||+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~-- 153 (310)
T cd07865 78 EICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT-- 153 (310)
T ss_pred EEEecccccccCCCceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC--
Confidence 9987643 4699999996 577776643 334689999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCC-----CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.+||+|||++....... ......++..|+|||++.+. ++.++||||||+++|+|++|++||.+......
T Consensus 154 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~ 232 (310)
T cd07865 154 -KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ 232 (310)
T ss_pred -CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 47899999999997653221 12345678899999988653 47889999999999999999999987765544
Q ss_pred HHHHHhCCCCCCCCCC----------------------------CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 321 FKEVLRNKPDFRRKPW----------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~----------------------------~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...+......++...+ ...+..+.+||.+||..||.+|||++++|+||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 233 LTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 3333221111111100 0124667899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=328.02 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=205.3
Q ss_pred cceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++.+.||+|+||.||+|.++ ..+..||+|.++... .......+.+|+.+++.+ +||||+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~iv 69 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--------------SDKQRRGFLAEALTLGQF-DHSNIV 69 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--------------CHHHHHHHHHHHHHHhcC-CCCCcC
Confidence 46999999999999999999765 456789999987541 112345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++..++..++||||+++|+|.+++... ...+++..+..++.||+.||.|||++|++||||||+|||++ .++.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~ 145 (266)
T cd05064 70 RLEGVITRGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLV 145 (266)
T ss_pred eEEEEEecCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCc
Confidence 9999999999999999999999998877543 35789999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCCCcc--ccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||.+.......... ...++..|+|||++.+ .++.++|||||||++|++++ |..||.+.+..+....+..+.
T Consensus 146 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~ 225 (266)
T cd05064 146 CKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF 225 (266)
T ss_pred EEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC
Confidence 9999999876543222111 2345678999998754 56889999999999999775 999999888777777665442
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. .+..+.++..+.+++.+||..+|.+||++.++++
T Consensus 226 ~---~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 226 R---LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred C---CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 2 1223567889999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=363.86 Aligned_cols=255 Identities=28% Similarity=0.403 Sum_probs=204.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+|+.||||++..... ........+.+|+.+++.+ +||||++++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~------------~~e~~~~rflrEi~ILs~L-~HPNIVkl~ 68 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS------------ENPLLKKRFLREAKIAADL-IHPGIVPVY 68 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc------------cCHHHHHHHHHHHHHHHhC-CCcCcCeEE
Confidence 479999999999999999999999999999999875311 1123456788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
+++.+++..|+||||++||+|.+.+.... ...++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 69 ~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd- 147 (932)
T PRK13184 69 SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG- 147 (932)
T ss_pred EEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc-
Confidence 99999999999999999999998875321 13456778899999999999999999999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCC-------------------CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIKPG-------------------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILL 306 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ell 306 (574)
.++.+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|+
T Consensus 148 --~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELL 225 (932)
T PRK13184 148 --LFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225 (932)
T ss_pred --CCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHH
Confidence 4788999999999765211 011235799999999988654 588999999999999999
Q ss_pred hCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 307 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 307 tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+|+.||................+ ....++..+|+.+.+++.+||..||++||+..+.+.+
T Consensus 226 TG~~PF~~~~~~ki~~~~~i~~P-~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 226 TLSFPYRRKKGRKISYRDVILSP-IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred HCCCCCCCcchhhhhhhhhccCh-hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999977554433222111111 1112345688999999999999999999887665543
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=334.01 Aligned_cols=259 Identities=27% Similarity=0.459 Sum_probs=212.9
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
....+|.+.+.||.|+||.||+|.+..+|+.||+|.+..... ........+.+|+.+++.+ +||||+
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~------------~~~~~~~~~~~Ei~~l~~l-~h~niv 78 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK------------QSNEKWQDIIKEVRFLQQL-RHPNTI 78 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc------------CcHHHHHHHHHHHHHHHhC-CCCCEE
Confidence 344679999999999999999999988999999998864311 1122345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+..|+|+||+. |+|.+.+.. ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~ 153 (307)
T cd06607 79 EYKGCYLREHTAWLVMEYCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGT 153 (307)
T ss_pred EEEEEEEeCCeEEEEHHhhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCC
Confidence 99999999999999999996 577766543 335799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||++...... ....|++.|+|||++. +.++.++||||||+++|+|++|..||...........+....
T Consensus 154 ~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~ 230 (307)
T cd06607 154 VKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND 230 (307)
T ss_pred EEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC
Confidence 999999998765432 3457889999999873 346789999999999999999999998876655544444332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. ......++..+.++|.+||..+|.+||++.+++.||||....
T Consensus 231 ~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 231 SP--TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred CC--CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 11 111124678899999999999999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=328.64 Aligned_cols=259 Identities=29% Similarity=0.430 Sum_probs=208.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|...+.||.|++|.||+|.+..+++.||+|.+.... .......+.+|+++++.+ +||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~iv~~~~ 66 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--------------NPDLQKQILRELEINKSC-KSPYIVKYYG 66 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--------------chHHHHHHHHHHHHHHhC-CCCCeeeeee
Confidence 6889999999999999999999999999999987541 112346788999999999 5999999999
Q ss_pred EEEc--CCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 177 AFED--DNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 177 ~~~~--~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+|.. .+.+|+||||++|++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++ .++.
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~ 143 (287)
T cd06621 67 AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQ 143 (287)
T ss_pred EEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCe
Confidence 8865 4579999999999999887643 2346689999999999999999999999999999999999998 4678
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC-----hhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~-----~~~~~~~i~~ 326 (574)
++|+|||++....... .....++..|+|||.+.+ .++.++|||||||++|+|++|..||.... ..+....+..
T Consensus 144 ~~l~dfg~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd06621 144 VKLCDFGVSGELVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN 222 (287)
T ss_pred EEEeeccccccccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc
Confidence 9999999987654322 224568889999998764 46889999999999999999999997652 2233333333
Q ss_pred CCCCC-CCCCC--CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 327 NKPDF-RRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 327 ~~~~~-~~~~~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..... ..... ..+++.+.+||.+||..+|.+|||+.+++.||||+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 223 MPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred CCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 22111 11110 12467899999999999999999999999999997643
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=328.68 Aligned_cols=249 Identities=24% Similarity=0.374 Sum_probs=198.1
Q ss_pred cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHH---HHHHhcCCCCcceEEEEEE
Q 008197 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK---ILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---il~~l~~hpniv~~~~~~~ 179 (574)
.||+|+||.||+|.+..+|+.||||.+.+..... .........|.. +++.. +||+|+.+++++.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~ 67 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM------------KQGETLALNERIMLSLVSTG-DCPFIVCMSYAFH 67 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeecccccc------------chhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeee
Confidence 4899999999999999999999999987642110 011112233333 33344 6999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeec
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG 259 (574)
..+.+|+||||++||+|.+++. ....+++..++.++.|++.||.|||+.+|+||||||+||+++ .++.+||+|||
T Consensus 68 ~~~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg 142 (278)
T cd05606 68 TPDKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLG 142 (278)
T ss_pred cCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCc
Confidence 9999999999999999988774 346799999999999999999999999999999999999998 47789999999
Q ss_pred cccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCCh---hHHHHHHHhCCCCCCCC
Q 008197 260 LSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 260 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~---~~~~~~i~~~~~~~~~~ 334 (574)
++...... .....+|+..|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+.... ..
T Consensus 143 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~ 217 (278)
T cd05606 143 LACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA----VE 217 (278)
T ss_pred CccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccC----CC
Confidence 98765432 2234589999999999864 368899999999999999999999976532 22222222211 11
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCccccccC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG 374 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~~ 374 (574)
....++..+.+++.+||..+|.+|| ++.++++||||+...
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 2235689999999999999999999 999999999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=325.31 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=208.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|.+.+.||.|+||.||+|.++.++..||+|.+.... .....+.+|+.+++.+ .||||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~~ 68 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMKEI-KHPNLVQLL 68 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----------------hHHHHHHHHHHHHHhC-CCCChhheE
Confidence 35889999999999999999999999999999886541 1345688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+++||||+++++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl 145 (263)
T cd05052 69 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKV 145 (263)
T ss_pred EEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEe
Confidence 9999999999999999999999988655556789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++......... ....+++.|+|||.+.+ .++.++|||||||++|+|++ |..||.+....+....+....
T Consensus 146 ~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--- 222 (263)
T cd05052 146 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--- 222 (263)
T ss_pred CCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---
Confidence 999999766433221 12234567999998764 45888999999999999998 999998877777666665432
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.......++.++.++|.+||..+|++|||+.++++
T Consensus 223 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 223 RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 12222457899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=341.35 Aligned_cols=261 Identities=32% Similarity=0.503 Sum_probs=208.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|.+.+.||.|+||.||+|.+..+|..||+|++..... .......+.+|+.+|+.+ +||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-------------VPTLAKRTLRELKILRHF-KHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-------------cccchHHHHHHHHHHHhc-CCCCccCH
Confidence 3579999999999999999999999999999999865310 112345677899999999 59999999
Q ss_pred EEEEE----cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 175 YNAFE----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 175 ~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
++++. ....+|+||||+. ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+||+++ .+
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~ 143 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---ED 143 (334)
T ss_pred HHhccccCCCCceEEEEEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CC
Confidence 99876 3457899999995 68888763 345699999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCCC-----ccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
+.+||+|||++........ ....+|+..|+|||++.+ .++.++|||||||++|+|++|++||.+......+..
T Consensus 144 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~ 223 (334)
T cd07855 144 CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKL 223 (334)
T ss_pred CcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHH
Confidence 8999999999876532211 134578999999998754 358899999999999999999999977654333222
Q ss_pred HHhC-----------------------CCCCCCCC----CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 324 VLRN-----------------------KPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 324 i~~~-----------------------~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+... ........ ++..++++.++|.+||+.+|.+|||+.+++.||||.....
T Consensus 224 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 224 ILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred HHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence 2211 01111111 2457889999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=346.31 Aligned_cols=248 Identities=32% Similarity=0.515 Sum_probs=212.7
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+...|.+...+|.|+|+.|-.+.+..+++..++|++.+.. ....+|+.++....+||||+
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------------------~~~~~e~~~~~~~~~h~niv 379 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------------------DDNQDEIPISLLVRDHPNIV 379 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccc-------------------cccccccchhhhhcCCCcce
Confidence 35678999999999999999999999999999999997641 23457888887888999999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++.+.+.++.+.|+|||++.|+.+++.+..++ .+. ..+..|+++|+.|+.|||++|||||||||+|||++ +..++
T Consensus 380 ~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~ 454 (612)
T KOG0603|consen 380 KSHDVYEDGKEIYLVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGH 454 (612)
T ss_pred eecceecCCceeeeeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCc
Confidence 99999999999999999999999999885543 233 78889999999999999999999999999999995 25789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~ 330 (574)
++|+|||.++..... ..+.|-|..|.|||++.. .+++++||||||++||+||+|+.||.....+ ++...+..+...
T Consensus 455 lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s 532 (612)
T KOG0603|consen 455 LRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS 532 (612)
T ss_pred EEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc
Confidence 999999999887654 455678899999999874 5689999999999999999999999877666 444444333222
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
..+|..+++||..||++||.+||++.+++.||||.+
T Consensus 533 ------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~ 568 (612)
T KOG0603|consen 533 ------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLS 568 (612)
T ss_pred ------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhc
Confidence 468999999999999999999999999999999933
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=332.83 Aligned_cols=256 Identities=30% Similarity=0.540 Sum_probs=213.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.....||.|+||.||+|.+..+++.||||.+.... ....+.+.+|+.+++.+ +||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---------------~~~~~~~~~e~~~l~~l-~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---------------QQRRELLFNEVVIMRDY-QHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---------------cchHHHHHHHHHHHHhC-CCCchhhhhh
Confidence 3555668999999999999999899999999986431 12345678999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+..++..|+|+||+++++|...+. ...+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~ 159 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLS 159 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEe
Confidence 9999999999999999999988652 25689999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++....... .....+|++.|+|||++.+ .++.++|||||||++|+|++|+.||...........+..... ....
T Consensus 160 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~ 238 (297)
T cd06659 160 DFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-PKLK 238 (297)
T ss_pred echhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC-CCcc
Confidence 999987554322 2234679999999999865 458899999999999999999999987766555554433222 2222
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.+..++..+.++|.+||+.+|.+||++.++++||||.....
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 33567889999999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=336.72 Aligned_cols=260 Identities=29% Similarity=0.475 Sum_probs=203.2
Q ss_pred ceeecccccccCCeEEEEEEEcC--CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
+|.+.+.||+|+||.||+|.+.. ++..||||.+..... ......+.+.+|+.+++.+ +||||+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~ 67 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE------------QYTGISQSACREIALLREL-KHENVVSL 67 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc------------cccCccHHHHHHHHHHHhc-CCCCccce
Confidence 48899999999999999999988 899999999876421 0112235677899999999 59999999
Q ss_pred EEEEEcC--CEEEEEEeccCCCchHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc-CC
Q 008197 175 YNAFEDD--NYVYIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AK 248 (574)
Q Consensus 175 ~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~-~~ 248 (574)
++++.+. ..+|+||||+++ +|.+.+.... ...+++..+..++.||+.||.|||+.+|+||||||+||+++. ..
T Consensus 68 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~ 146 (316)
T cd07842 68 VEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGP 146 (316)
T ss_pred EEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCC
Confidence 9999988 889999999964 6777664322 237899999999999999999999999999999999999984 12
Q ss_pred CCCCeEEEeeccccccCCCC----CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH---
Q 008197 249 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--- 319 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~--- 319 (574)
.++.+||+|||++....... .....++|+.|+|||++.+ .++.++|||||||++|+|++|++||.+.....
T Consensus 147 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 226 (316)
T cd07842 147 ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKS 226 (316)
T ss_pred ccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccccc
Confidence 27889999999998654322 1234578999999998765 35788999999999999999999997654321
Q ss_pred ------HHHHHHhCC--------------C-------CCCCCCCC------------CCCHHHHHHHHHccccCCCCCCC
Q 008197 320 ------IFKEVLRNK--------------P-------DFRRKPWP------------SISNSAKDFVKKLLVKDPRARLT 360 (574)
Q Consensus 320 ------~~~~i~~~~--------------~-------~~~~~~~~------------~~~~~~~~li~~~L~~dp~~Rps 360 (574)
.+..++..- + ......++ ..+..+.++|.+||..||++|||
T Consensus 227 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps 306 (316)
T cd07842 227 NPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRIT 306 (316)
T ss_pred chhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcC
Confidence 111111100 0 00011111 45678999999999999999999
Q ss_pred HHHHhcCccc
Q 008197 361 AAQALSHPWV 370 (574)
Q Consensus 361 ~~~~l~hp~~ 370 (574)
+.+++.||||
T Consensus 307 ~~eil~~~~f 316 (316)
T cd07842 307 AEEALEHPYF 316 (316)
T ss_pred HHHHhcCCCC
Confidence 9999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=332.12 Aligned_cols=255 Identities=29% Similarity=0.478 Sum_probs=207.5
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||.|++|.||+|.++.+|..||||++..... .......+.+|+.+++.+ +||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-------------DEGVPSTAIREISLLKEL-NHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-------------cccchhHHHHHHHHHHhc-CCCCccCHhhe
Confidence 6778899999999999999999999999999865411 112234677899999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+.+++..|+||||++ ++|.+++.......+++..+..++.||+.||.|||+++++||||+|+||+++. ++.++|+|
T Consensus 67 ~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---~~~~~l~d 142 (283)
T cd07835 67 VHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLAD 142 (283)
T ss_pred eccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---CCcEEEee
Confidence 999999999999995 68988875544457899999999999999999999999999999999999984 78999999
Q ss_pred eccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-----
Q 008197 258 FGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----- 329 (574)
Q Consensus 258 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~----- 329 (574)
||++...... .......+++.|+|||++.+. ++.++|||||||++|+|++|++||...........+.....
T Consensus 143 f~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd07835 143 FGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDED 222 (283)
T ss_pred cccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChH
Confidence 9999765322 222334678999999987543 47889999999999999999999987665444433332110
Q ss_pred ----------------CC----CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 330 ----------------DF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 330 ----------------~~----~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.+ .....+.++..+.++|.+||+.+|.+|||+.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 223 VWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred HhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00 011134577899999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=331.20 Aligned_cols=255 Identities=25% Similarity=0.406 Sum_probs=202.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|.+.+.||+|+||.||+|.+..+|..||||.+..... ......+.+|+.+++.+ +||||++++
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~ni~~~~ 69 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--------------EGVPFTAIREASLLKGL-KHANIVLLH 69 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--------------CCCcHHHHHHHHHHHhc-CCCCEeEEE
Confidence 579999999999999999999999999999999865410 11223567899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++..|+||||+. ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l 144 (291)
T cd07870 70 DIIHTKETLTFVFEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKL 144 (291)
T ss_pred EEEecCCeEEEEEeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEE
Confidence 99999999999999995 6787766443 35678899999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC----
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN---- 327 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~---- 327 (574)
+|||++...... .......+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.... +.+..+...
T Consensus 145 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~ 224 (291)
T cd07870 145 ADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVP 224 (291)
T ss_pred eccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCC
Confidence 999998754322 22334568999999998865 3578899999999999999999999765432 222222110
Q ss_pred ----------CCCCCCC------------CCC--CCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 328 ----------KPDFRRK------------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 328 ----------~~~~~~~------------~~~--~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.+.+... .|. ..++.+.+++.+||..||.+|||+.+++.||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 225 TEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred ChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 0000000 011 125678999999999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=340.13 Aligned_cols=259 Identities=32% Similarity=0.507 Sum_probs=208.0
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+..+|.+.+.||.|+||.||+|.++.+|..||+|++.... ....+.+.+|+.+++.+ +||||++
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---------------~~~~~~~~~Ei~~l~~l-~h~~i~~ 66 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---------------PQSVKHALREIKIIRRL-DHDNIVK 66 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---------------CchHHHHHHHHHHHHhc-CCCcchh
Confidence 3468999999999999999999999999999999886541 12345678899999999 5999999
Q ss_pred EEEEEEcC--------------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 174 FYNAFEDD--------------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 174 ~~~~~~~~--------------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
+++++... ..+|+||||++ ++|.+.+. ...+++..++.++.||+.||.|||+.||+||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp 142 (342)
T cd07854 67 VYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKP 142 (342)
T ss_pred hHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 99876543 36899999996 58877663 34689999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCC----CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCC
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFW 313 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~ 313 (574)
+||+++. .+..+||+|||++....... ......|+..|+|||++.+ .++.++|||||||++|+|++|+.||.
T Consensus 143 ~Nili~~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 143 ANVFINT--EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred HHEEEcC--CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence 9999974 45679999999997653221 1123468899999998753 35789999999999999999999998
Q ss_pred CCChhHHHHHHHhCCCCC----------------------CC----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 314 DKTEDGIFKEVLRNKPDF----------------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~----------------------~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+.........+....+.. .. ...+.++.++.+||.+||..||.+|||+.+++.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 221 GAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 776555444443321100 00 0123578889999999999999999999999999
Q ss_pred ccccccC
Q 008197 368 PWVREGG 374 (574)
Q Consensus 368 p~~~~~~ 374 (574)
|||+...
T Consensus 301 ~~~~~~~ 307 (342)
T cd07854 301 PYMSCYS 307 (342)
T ss_pred Ccccccc
Confidence 9998643
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=326.83 Aligned_cols=256 Identities=31% Similarity=0.566 Sum_probs=213.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|...+.||.|++|.||++.+..+++.||+|++.... ....+.+.+|+.+++.+ +||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---------------~~~~~~~~~e~~~l~~~-~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---------------QQRRELLFNEVVIMRDY-QHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---------------hhHHHHHHHHHHHHHHc-CCCChheEEE
Confidence 4555679999999999999998899999999875431 12345678999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+..++|+||++|++|.+++.. .++++..+..++.||+.||.|||++||+||||+|+||+++ .++.++|+
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~ 157 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLS 157 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEc
Confidence 99999999999999999999988743 5689999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++....... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||...+.......+.........
T Consensus 158 d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~- 236 (285)
T cd06648 158 DFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK- 236 (285)
T ss_pred ccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-
Confidence 999887553322 2234579999999998865 4578999999999999999999999887766666666554322211
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
....++..+.+||.+||..+|++|||+.++++||||+....
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 237 NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 12347889999999999999999999999999999987553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=343.16 Aligned_cols=253 Identities=23% Similarity=0.317 Sum_probs=203.7
Q ss_pred ccceeecccccccCCeEEEEEEEcCC-----CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|.+++.||+|+||.||+|.+... +..||||++.... .....+.+.+|+.+|+++..||
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--------------~~~~~~~~~~Ei~~l~~l~~Hp 101 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--------------RSSEKQALMSELKIMTHLGPHL 101 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--------------ChHHHHHHHHHHHHHHhcCCCC
Confidence 35799999999999999999987433 3469999986531 1123467899999999995599
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc---------------------------------------------
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------------------------------------- 204 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------------------------------------- 204 (574)
||+++++++...+.+|||||||++|+|.+++....
T Consensus 102 nIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (400)
T cd05105 102 NIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMK 181 (400)
T ss_pred CeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccc
Confidence 99999999999999999999999999998875431
Q ss_pred -------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 008197 205 -------------------------------------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235 (574)
Q Consensus 205 -------------------------------------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHr 235 (574)
...+++..+..++.||+.||.|||+.+|+||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~ 261 (400)
T cd05105 182 QADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHR 261 (400)
T ss_pred cccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 1247888899999999999999999999999
Q ss_pred cCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCC
Q 008197 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRR 310 (574)
Q Consensus 236 Dlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~ 310 (574)
||||+|||++ .++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..
T Consensus 262 dikp~Nill~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~ 338 (400)
T cd05105 262 DLAARNVLLA---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGT 338 (400)
T ss_pred CCChHhEEEe---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999998 477899999999976533221 223457788999998764 46889999999999999997 999
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 311 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 311 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
||............+....... ....++..+.+++.+||..+|++|||+.++.+
T Consensus 339 P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 339 PYPGMIVDSTFYNKIKSGYRMA--KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCcccchhHHHHHHHhcCCCCC--CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 9987655444444333332222 22467889999999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=330.39 Aligned_cols=253 Identities=35% Similarity=0.662 Sum_probs=215.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||.|+||.||+|.+..+|+.||+|++.+... ........+..|+.+++++.+||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~ 69 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL------------IKEKKVKYVKIEKEVLTRLNGHPGIIKLYY 69 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc------------cchHHHHHHHHHHHHHHhcccCCCchhHHH
Confidence 68999999999999999999999999999999876421 112234578899999999955999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+.+++||||+++++|.+.+.. ...+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~ 144 (280)
T cd05581 70 TFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKIT 144 (280)
T ss_pred HhcCCceEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEec
Confidence 99999999999999999999998843 35799999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCC---------------------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCC
Q 008197 257 DFGLSDFIKPGK---------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD 314 (574)
Q Consensus 257 DFG~a~~~~~~~---------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~ 314 (574)
|||++....... ......|+..|+|||++... ++.++||||||++++++++|+.||..
T Consensus 145 df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (280)
T cd05581 145 DFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRG 224 (280)
T ss_pred CCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 999987654322 12235688999999987654 57889999999999999999999988
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCH----HHHhcCccc
Q 008197 315 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWV 370 (574)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~----~~~l~hp~~ 370 (574)
......+..+......++ +.+++.+.+||.+||+.+|.+|||+ .++++||||
T Consensus 225 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 225 SNEYLTFQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred ccHHHHHHHHHhcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 876666666654433322 3568899999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=323.84 Aligned_cols=247 Identities=23% Similarity=0.371 Sum_probs=207.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.++||.|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.+++.+ +||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~~ 67 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----------------MSVQAFLEEANLMKTL-QHDKLVRLY 67 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----------------hhHHHHHHHHHHHHhC-CCCCeeeEE
Confidence 47999999999999999999864 56789999876531 1346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+..++||||+++++|.+++.......+++..+..++.||+.||.|||+.+++||||||+||+++ .++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l 144 (261)
T cd05072 68 AVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKI 144 (261)
T ss_pred EEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEE
Confidence 9999999999999999999999988766667789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||...........+....
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~--- 221 (261)
T cd05072 145 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY--- 221 (261)
T ss_pred CCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC---
Confidence 99999986543221 123346678999998764 45788999999999999998 999998877766666665442
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+....++.++.+++.+||..+|++|||++++++
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 222 RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 22233567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=327.96 Aligned_cols=256 Identities=28% Similarity=0.428 Sum_probs=208.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcceEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVVKFY 175 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv~~~ 175 (574)
|++.+.||.|+||.||+|.++.++..||||.+..... .......+.+|+.+++++. +||||++++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~ 67 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-------------EEGIPLSTLREIALLKQLESFEHPNIVRLL 67 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-------------cchhhhhHHHHHHHHHHhhccCCCCcceEE
Confidence 6788999999999999999988899999999875311 1112345667888887774 599999999
Q ss_pred EEEEcCCE-----EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 176 NAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 176 ~~~~~~~~-----~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
+++...+. ++++|||+. ++|.+++.......+++..+..++.||+.||.|||+.+++|+||+|+||+++. +
T Consensus 68 ~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~---~ 143 (287)
T cd07838 68 DVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---D 143 (287)
T ss_pred EEEeeccCCCCceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc---C
Confidence 99988776 999999996 48888776544456999999999999999999999999999999999999984 6
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
+.+||+|||++.............++..|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 144 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd07838 144 GQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIG 223 (287)
T ss_pred CCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcC
Confidence 8999999999987654444445578999999998865 458899999999999999999999988877766666544211
Q ss_pred C----------------CCC-------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 330 D----------------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 330 ~----------------~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
. +.. ...+.+++.+.++|.+||..||.+||++.+++.||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 224 LPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0 000 0012456788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=324.16 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=214.5
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||.|++|.||+|.+..+++.||||++..... ......+.+|+.++..+. ||||+++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--------------~~~~~~~~~e~~~l~~l~-~~~i~~~~~ 66 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--------------EEFRKQLLRELKTLRSCE-SPYVVKCYG 66 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--------------hHHHHHHHHHHHHHHhcC-CCCeeeEEE
Confidence 58899999999999999999999999999999876421 123567899999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++...+.+++||||+++++|.+++... ..+++..+..++.||+.||.|||+ .+++||||+|+||+++ .++.++|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l 141 (264)
T cd06623 67 AFYKEGEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKI 141 (264)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEE
Confidence 999999999999999999999988543 679999999999999999999999 9999999999999998 4789999
Q ss_pred EeeccccccCCCCCc-cccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhCCCC
Q 008197 256 TDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPD 330 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~---~~~~~~~i~~~~~~ 330 (574)
+|||++......... ....++..|+|||.+... ++.++||||||+++|+|++|..||.... .......+......
T Consensus 142 ~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 221 (264)
T cd06623 142 ADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP 221 (264)
T ss_pred ccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC
Confidence 999999876543332 256789999999987654 5788999999999999999999997663 33444444432211
Q ss_pred CCCCCCCC-CCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 FRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~-~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
..... ++..+.++|.+||..+|++|||+.++++||||+..
T Consensus 222 ---~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 222 ---SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred ---CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 11123 78899999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=324.90 Aligned_cols=253 Identities=26% Similarity=0.453 Sum_probs=206.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|++..+++.||||.+.... .........+.+|+.+++.+ +||||++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~------------~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 68 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFE------------MMDAKARQDCVKEIDLLKQL-NHPNVIKYL 68 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccc------------cCCHHHHHHHHHHHHHHHhC-CCcceeeee
Confidence 46999999999999999999999999999999876431 11123445688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++.+.+..++|+||+++|+|.+.+... ....+++..+..++.||+.||.|||+++|+|+||||+||+++ .++.+
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~ 145 (267)
T cd08228 69 DSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVV 145 (267)
T ss_pred eeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCE
Confidence 9999999999999999999998877432 235589999999999999999999999999999999999998 47789
Q ss_pred EEEeeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~ 329 (574)
+|+|||++........ .....|++.|+|||.+.+ ..+.++|+||+|+++|+|++|+.||..... ......+....
T Consensus 146 ~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~- 224 (267)
T cd08228 146 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD- 224 (267)
T ss_pred EECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC-
Confidence 9999999886643222 234578999999998764 457889999999999999999999965532 23333332221
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
++.......+..+.++|.+||..+|.+|||+.++++
T Consensus 225 -~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 225 -YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred -CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 222222356788999999999999999999999976
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=326.78 Aligned_cols=254 Identities=22% Similarity=0.324 Sum_probs=207.8
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +|||
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--------------~~~~~~~~~~e~~~l~~l-~~~~ 70 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--------------SEQDESDFLMEALIMSKF-NHQN 70 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--------------CHHHHHHHHHHHHHHHhC-CCCC
Confidence 569999999999999999999877 77899999876431 122345688899999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
|+++++++.+.+..++||||++|++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||+++
T Consensus 71 i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~ 150 (277)
T cd05036 71 IVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLT 150 (277)
T ss_pred EeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEe
Confidence 99999999999999999999999999998855431 2589999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCc---cccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 320 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~ 320 (574)
..+....+||+|||++......... ....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+....
T Consensus 151 ~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~ 230 (277)
T cd05036 151 CKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV 230 (277)
T ss_pred ccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 5444567999999999866322211 1223456899999875 456899999999999999997 9999988777766
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
...+..... . .....++..+.+++.+||..+|++|||+.++++|
T Consensus 231 ~~~~~~~~~-~--~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 231 MEFVTGGGR-L--DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHcCCc-C--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 665544322 1 1124578899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=332.32 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=203.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCE--EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
++|++.+.||+|+||.||+|.++.++.. +|+|.+... ........+.+|+.++.++.+||||++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--------------~~~~~~~~~~~Ei~~l~~l~~h~~iv~ 72 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--------------ASKDDHRDFAGELEVLCKLGHHPNIIN 72 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--------------CCHHHHHHHHHHHHHHHHhcCCCCcce
Confidence 3689999999999999999998877764 577765432 112234578899999999966999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
+++++...+.+|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp 152 (303)
T cd05088 73 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 152 (303)
T ss_pred EEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 9999999999999999999999999885432 23588999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCCh
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTE 317 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~ 317 (574)
+|||++ .++.+||+|||++.............++..|+|||++.+. ++.++|||||||++|+|+| |..||.+...
T Consensus 153 ~Nili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 229 (303)
T cd05088 153 RNILVG---ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229 (303)
T ss_pred heEEec---CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh
Confidence 999998 4788999999998643222111222346679999988654 5789999999999999998 9999987777
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.+....+.... .......+++++.+||.+||..+|++||++.+++.+
T Consensus 230 ~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 230 AELYEKLPQGY---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHHHHHHhcCC---cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 66665553321 111223478899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=323.68 Aligned_cols=249 Identities=27% Similarity=0.439 Sum_probs=200.9
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~ 180 (574)
...||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~ 76 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---------------SRYVQPLHEEIALHSYL-KHRNIVQYLGSDSE 76 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCC---------------HHHHHHHHHHHHHHHhc-CCCCeeeeeeeecc
Confidence 357999999999999999999999999886541 12345788999999999 59999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
++..++|+||+++++|.+.+.... ..+ ++..+..++.||+.||.|||+.||+||||||+||+++. ..+.++|+||
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~df 153 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDF 153 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecc
Confidence 999999999999999998875432 345 78889999999999999999999999999999999974 3568999999
Q ss_pred ccccccCCCC-CccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCChhHH-HHHHHhCCCCCCC
Q 008197 259 GLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRR 333 (574)
Q Consensus 259 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~-~~~i~~~~~~~~~ 333 (574)
|++....... ......|++.|+|||++.+. ++.++||||||+++|+|++|+.||........ ...+.... ...
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~ 231 (268)
T cd06624 154 GTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK--IHP 231 (268)
T ss_pred hhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc--cCC
Confidence 9987654322 22344689999999988542 57899999999999999999999965433221 11111001 111
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.....+++++.+|+.+||..+|.+|||+.+++.||||
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 1123577899999999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=329.36 Aligned_cols=257 Identities=27% Similarity=0.516 Sum_probs=209.6
Q ss_pred ceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
.|++.+.||.|+||.||+|.+. .+|..||+|++...... ......+.+.+|+.+++.+.+||||+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~-----------~~~~~~~~~~~e~~~l~~l~~~~~i~~ 69 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIV-----------QKAKTTEHTRTERQVLEHIRQSPFLVT 69 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhh-----------hcchHHHHHHHHHHHHHhcccCCChhc
Confidence 3789999999999999999874 47899999998754210 011234567889999999977999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++..+..+|+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++||||+|+|||++ .++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~ 144 (290)
T cd05613 70 LHYAFQTDTKLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHV 144 (290)
T ss_pred eeeEeecCCeEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCE
Confidence 99999999999999999999999998854 35789999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCC--CccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCCh----hHHHHHH
Q 008197 254 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV 324 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~----~~~~~~i 324 (574)
||+|||++....... ......|+..|+|||.+.+ ..+.++||||||+++|+|++|..||..... ..+...+
T Consensus 145 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~ 224 (290)
T cd05613 145 VLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI 224 (290)
T ss_pred EEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh
Confidence 999999987654322 2234578999999998864 346789999999999999999999964322 2233333
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
......+ .+.+++.+.+++.+||..+|.+|| ++.+++.||||+..
T Consensus 225 ~~~~~~~----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 225 LKSEPPY----PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred hccCCCC----CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 3332222 135788999999999999999997 89999999999875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=336.79 Aligned_cols=256 Identities=20% Similarity=0.301 Sum_probs=202.1
Q ss_pred cccccc--CCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 102 KLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
..||+| +||+||+|.+..+|+.||||++..... .....+.+.+|+.+++.+ +||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-------------TEEHLKALQNEVVLSHFF-RHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-------------CHHHHHHHHHHHHHHHhC-CCCCcceEeeeEe
Confidence 456766 999999999999999999999865311 122346788999999988 5999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeec
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG 259 (574)
.++..++|+||+.+++|.+++.......+++..+..++.||+.||.|||+.||+||||||+|||++ .++.++++|||
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~ 146 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLS 146 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechH
Confidence 999999999999999999887654445689999999999999999999999999999999999998 46889999998
Q ss_pred cccccCCCC-C-------ccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 260 LSDFIKPGK-K-------FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 260 ~a~~~~~~~-~-------~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
.+....... . .....++..|+|||++.+. ++.++|||||||++|+|++|+.||.+..........+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~ 226 (328)
T cd08226 147 HLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGP 226 (328)
T ss_pred HHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCC
Confidence 653321110 0 0112456679999998653 5789999999999999999999997766544444433321
Q ss_pred CCCC-------------------------------------------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHh
Q 008197 329 PDFR-------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365 (574)
Q Consensus 329 ~~~~-------------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l 365 (574)
...+ ......+++.+.+||.+||+.||.+|||+.++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l 306 (328)
T cd08226 227 PYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306 (328)
T ss_pred CCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1100 001123567789999999999999999999999
Q ss_pred cCccccccC
Q 008197 366 SHPWVREGG 374 (574)
Q Consensus 366 ~hp~~~~~~ 374 (574)
+||||+...
T Consensus 307 ~~~~~~~~~ 315 (328)
T cd08226 307 SHAFFKQVK 315 (328)
T ss_pred hCHHHHHHH
Confidence 999998653
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=320.09 Aligned_cols=254 Identities=30% Similarity=0.536 Sum_probs=216.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||.|+||.||++.+..++..||+|++..... .......+..|+++++.+. |||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l~-~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-------------SEKEREDALNEVKILKKLN-HPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-------------ChHHHHHHHHHHHHHHhcC-CCChhheEE
Confidence 48899999999999999999998999999999865421 1234567889999999994 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
.+...+..++|+||+++++|.+.+.... ...+++..+..++.+++.||.|||++|++|+||+|+||+++ .++.++
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~ 143 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVK 143 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEE
Confidence 9999999999999999999999886543 47799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++....... ......|++.|+|||.+.+. ++.++|+||+|+++|+|++|..||...........+........
T Consensus 144 l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 223 (258)
T cd08215 144 LGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI 223 (258)
T ss_pred ECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC
Confidence 99999997654433 23445789999999987654 57889999999999999999999988777666666655432211
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...++..+.+++.+||..+|++|||+.++|+||||
T Consensus 224 ---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 224 ---PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ---CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 13578899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=330.08 Aligned_cols=261 Identities=28% Similarity=0.497 Sum_probs=214.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|.+.+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.+ +||||++++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---------------~~~~~~~~~e~~~l~~l-~hp~i~~~~ 82 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---------------QPKKELIINEILVMREN-KHPNIVNYL 82 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---------------chHHHHHHHHHHHHhhc-CCCCeeehh
Confidence 58999999999999999999998899999999875431 12345678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+.+...+..|+|+||+++++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL 156 (293)
T cd06647 83 DSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKL 156 (293)
T ss_pred heeeeCCcEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEE
Confidence 999999999999999999999988742 3578999999999999999999999999999999999998 4778999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++....... ......|++.|+|||++.. .++.++|||||||++|+|++|+.||...+.......+..... ...
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~ 235 (293)
T cd06647 157 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PEL 235 (293)
T ss_pred ccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCC
Confidence 9999887554332 2234578999999998754 457899999999999999999999977655443333322211 111
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~ 379 (574)
..+..++..+.++|.+||..+|.+||++.+++.||||+........
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~ 281 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSL 281 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccc
Confidence 1233567889999999999999999999999999999976544433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=336.27 Aligned_cols=259 Identities=31% Similarity=0.505 Sum_probs=210.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+|..||||++.... ........+.+|+.+|+.+ +||||++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~iv~ 78 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-------------QSELFAKRAYRELRLLKHM-KHENVIG 78 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-------------cchHHHHHHHHHHHHHHhc-CCCCccc
Confidence 5568999999999999999999999999999999886431 1112345678999999999 5999999
Q ss_pred EEEEEEcCC------EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDN------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++.... .+++||||+ |++|.+++. ...+++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~-- 152 (343)
T cd07880 79 LLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN-- 152 (343)
T ss_pred eeeeecCCccccccceEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--
Confidence 999987643 469999999 778877663 35789999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++...... .....+++.|+|||++.+ .++.++|+|||||++|+|++|+.||.+......+..++
T Consensus 153 -~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~ 229 (343)
T cd07880 153 -EDCELKILDFGLARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIM 229 (343)
T ss_pred -CCCCEEEeecccccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 4788999999999765432 234578999999998864 35788999999999999999999998766554444443
Q ss_pred hCCCC-----------------------CC----CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 326 RNKPD-----------------------FR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 326 ~~~~~-----------------------~~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..... +. ...++.+++.+.++|.+||..||.+|||+.+++.||||+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~ 306 (343)
T cd07880 230 KVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306 (343)
T ss_pred HhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence 32111 00 0112467888999999999999999999999999999987543
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=336.72 Aligned_cols=253 Identities=25% Similarity=0.334 Sum_probs=202.1
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++.+.||.|+||.||+|.+. .+++.||+|++..... ......+..|+.++.++.+|||
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--------------~~~~~~~~~E~~~~~~l~~h~n 72 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--------------ASEYKALMTELKILIHIGHHLN 72 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--------------HHHHHHHHHHHHHHHhhccCcc
Confidence 58999999999999999999753 3457899998864311 1233567889999999966999
Q ss_pred cceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhc---------------------------------------------
Q 008197 171 VVKFYNAFED-DNYVYIAMELCEGGELLDRILAKK--------------------------------------------- 204 (574)
Q Consensus 171 iv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~--------------------------------------------- 204 (574)
|+++++++.. +..+++||||+++++|.+.+....
T Consensus 73 iv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (337)
T cd05054 73 VVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKS 152 (337)
T ss_pred hhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcc
Confidence 9999998864 567899999999999998875432
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC-
Q 008197 205 --------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK- 269 (574)
Q Consensus 205 --------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~- 269 (574)
..++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~ 229 (337)
T cd05054 153 LSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY 229 (337)
T ss_pred hhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcch
Confidence 12688999999999999999999999999999999999998 477899999999986533221
Q ss_pred --ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008197 270 --FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 345 (574)
Q Consensus 270 --~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 345 (574)
.....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+....+.+...+........ ....++++.+
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 307 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA--PEYATPEIYS 307 (337)
T ss_pred hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCC--CccCCHHHHH
Confidence 223456778999997754 56889999999999999998 99999876554444444433222111 1356789999
Q ss_pred HHHHccccCCCCCCCHHHHhcC
Q 008197 346 FVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 346 li~~~L~~dp~~Rps~~~~l~h 367 (574)
++.+||+.+|++||++.++++|
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=336.77 Aligned_cols=274 Identities=25% Similarity=0.381 Sum_probs=211.3
Q ss_pred cccceee-cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~-~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+.++|.. .+.||.|+||.||+|.+..+++.||||++.............. ..........+.+|+.+++.+ +||||+
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l-~h~~iv 83 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQ-LVGMCGIHFTTLRELKIMNEI-KHENIM 83 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchh-hhcccccchhHHHHHHHHHhC-CCccee
Confidence 4457764 5789999999999999999999999999865421100000000 000000122467899999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++..++..++||||+. |+|.+.+. ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~ 157 (335)
T PTZ00024 84 GLVDVYVEGDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGI 157 (335)
T ss_pred eeeEEEecCCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCC
Confidence 99999999999999999996 58888774 345689999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCC---------------CCCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCC
Q 008197 253 LKATDFGLSDFIKP---------------GKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDK 315 (574)
Q Consensus 253 vkl~DFG~a~~~~~---------------~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~ 315 (574)
+||+|||++..... ........+++.|+|||++.+. ++.++|||||||++|+|++|.+||.+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999876541 1112234678899999988653 478899999999999999999999887
Q ss_pred ChhHHHHHHHhCCCCCCCC------------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 316 TEDGIFKEVLRNKPDFRRK------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
...+.+..+.......... ..+..+.++.++|.+||..+|++|||+.++|.||||+
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 7666555544321111100 0134578899999999999999999999999999999
Q ss_pred ccCC
Q 008197 372 EGGD 375 (574)
Q Consensus 372 ~~~~ 375 (574)
....
T Consensus 318 ~~~~ 321 (335)
T PTZ00024 318 SDPL 321 (335)
T ss_pred CCCC
Confidence 7543
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=355.16 Aligned_cols=276 Identities=19% Similarity=0.242 Sum_probs=197.2
Q ss_pred cccccceeecccccccCCeEEEEEEEcCC-CCEEEEEEeccch---hhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNK---ILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
..+..+|++++.||+|+||+||+|..+.. +..+++|.+.... .......... ..........+.+|+.+|+.+ +
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~~~~~~~~~~~~Ei~il~~l-~ 221 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR-VKAGSRAAIQLENEILALGRL-N 221 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHH-hhcchHHHHHHHHHHHHHHhC-C
Confidence 34567899999999999999999876543 2223333111000 0000000000 001122345688999999999 5
Q ss_pred CCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 168 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
||||+++++++...+..|+|++++ +++|++++.... ........++.++.||+.||.|||++|||||||||+|||+
T Consensus 222 HpnIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl 300 (501)
T PHA03210 222 HENILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL 300 (501)
T ss_pred CCCcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999999999999999999999999 457887764322 1234467788999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC---hh
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---ED 318 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~---~~ 318 (574)
+ .++.+||+|||++..+..... ....+||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ..
T Consensus 301 ~---~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 301 N---CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred C---CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 8 478999999999987654322 234689999999999865 46889999999999999999886554322 22
Q ss_pred HHHHHHHhCCC----CCCCC------------------C------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 319 GIFKEVLRNKP----DFRRK------------------P------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 319 ~~~~~i~~~~~----~~~~~------------------~------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+..++.... .++.. . ...++.++.++|.+||+.||.+|||+.++|.||||
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 22222222110 00000 0 01356678889999999999999999999999999
Q ss_pred ccc
Q 008197 371 REG 373 (574)
Q Consensus 371 ~~~ 373 (574)
...
T Consensus 458 ~~~ 460 (501)
T PHA03210 458 SAE 460 (501)
T ss_pred hcC
Confidence 864
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=324.01 Aligned_cols=250 Identities=33% Similarity=0.564 Sum_probs=210.8
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||.|+||.||+|.+..+|+.||+|.+..... ......+.+.+|+.+++++. ||||+++++.+..+..
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~------------~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~ 67 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM------------IRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKN 67 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhh------------hhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcE
Confidence 6899999999999998999999999876421 11234567889999999994 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
.|+|+||+++++|.+++... ..+++..+..++.||+.||.|||+.|++||||+|+||+++ .++.++|+|||++..
T Consensus 68 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~~ 142 (265)
T cd05579 68 LYLVMEYLPGGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSKV 142 (265)
T ss_pred EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccchh
Confidence 99999999999998887443 4789999999999999999999999999999999999998 478999999999875
Q ss_pred cCCCC---------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 264 IKPGK---------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 264 ~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
..... ......++..|+|||.+... .+.++||||||+++|+|++|..||...........+..+...++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (265)
T cd05579 143 GLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE 222 (265)
T ss_pred cccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc
Confidence 43221 22345788999999987654 578899999999999999999999888877777777664433322
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCH---HHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTA---AQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~---~~~l~hp~~~~~ 373 (574)
...++..+.+||.+||+.+|.+|||+ .++|+||||++.
T Consensus 223 --~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 223 --DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred --cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 12358999999999999999999999 999999999853
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=338.88 Aligned_cols=251 Identities=26% Similarity=0.391 Sum_probs=209.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+...++..||+|.||+||+|++- | .||||++.-. ...+...+.|++|+.++++-+ |.||+-
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~-------------~pt~~qlqaFKnEVa~lkkTR-H~NIlL 452 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVD-------------DPTPEQLQAFKNEVAVLKKTR-HENILL 452 (678)
T ss_pred CHHHhhccceeccccccceeecccc--c-ceEEEEEecC-------------CCCHHHHHHHHHHHHHHhhcc-hhhhee
Confidence 3456778999999999999999865 3 7999998654 233457789999999999995 999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+.|+|..++. .||+.+|+|-+|+.+++-.+ ..|.....+.|++||+.|+.|||.++|||||||..||+|. +++.|
T Consensus 453 FMG~~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~---~~~kV 527 (678)
T KOG0193|consen 453 FMGACMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH---EDLKV 527 (678)
T ss_pred eehhhcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc---cCCcE
Confidence 9999998887 99999999999999986554 6789999999999999999999999999999999999998 46999
Q ss_pred EEEeecccccc---CCCCCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 254 KATDFGLSDFI---KPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 254 kl~DFG~a~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
||+|||++... ..........|...|||||++.. .+++.+||||||||+|||++|..||.....+.++-.+-+
T Consensus 528 kIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGR 607 (678)
T ss_pred EEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecc
Confidence 99999998643 22233445678889999999863 468899999999999999999999987777666666655
Q ss_pred CCCCCCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+...... ....+.+.++++|+..||..++++||...+||.
T Consensus 608 G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 608 GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 5322211 122456679999999999999999999999876
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=326.82 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=208.2
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+|.+.+.||+|+||.||+|.+.. ++..||||.+.... .....+.+.+|+++++.+ .|||
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~~~~ 69 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--------------SNDARKDFEREAELLTNF-QHEN 69 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--------------CHHHHHHHHHHHHHHHhc-CCCC
Confidence 468899999999999999998743 46789999986531 112346789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 238 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlk 238 (574)
|+++++++......++||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++|||||
T Consensus 70 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk 149 (280)
T cd05049 70 IVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA 149 (280)
T ss_pred chheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence 9999999999999999999999999999885431 2457899999999999999999999999999999
Q ss_pred CCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCC
Q 008197 239 PENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFW 313 (574)
Q Consensus 239 p~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~ 313 (574)
|+||+++ .++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.
T Consensus 150 p~nili~---~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~ 226 (280)
T cd05049 150 TRNCLVG---YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred cceEEEc---CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCC
Confidence 9999998 478999999999976533221 123456788999998864 45888999999999999998 999998
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 314 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..........+..+..... ...++..+.+++.+||..||.+||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 227 GLSNEEVIECITQGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred CCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 8887777777765543222 2457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=329.26 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=204.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC--EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
++|++.+.||.|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.++.++.+||||++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~E~~~l~~l~~hp~iv~ 67 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--------------SENDHRDFAGELEVLCKLGHHPNIIN 67 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--------------CHHHHHHHHHHHHHHHhhcCCCchhh
Confidence 468999999999999999999877764 46888775321 11234568899999999966999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
+++++...+.+|+|+||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp 147 (297)
T cd05089 68 LLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAA 147 (297)
T ss_pred eEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCc
Confidence 9999999999999999999999999885432 13588999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCCh
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTE 317 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~ 317 (574)
+|||++ .++.+||+|||++..............+..|+|||++.+ .++.++|||||||++|+|++ |..||.+...
T Consensus 148 ~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~ 224 (297)
T cd05089 148 RNVLVG---ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC 224 (297)
T ss_pred ceEEEC---CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999998 478899999999864322211122233557999998765 45889999999999999997 9999988887
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+..+.. ......++..+.+|+.+||..+|.+|||+.++++
T Consensus 225 ~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 225 AELYEKLPQGYR---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred HHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 777776655421 1122457899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=328.71 Aligned_cols=259 Identities=25% Similarity=0.360 Sum_probs=209.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|.+.+.||.|+||.||+|.+..+++.||||.+.+... ......+..|+.++..+.+||||++++
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--------------~~~~~~~~~e~~~~~~~~~~~~i~~~~ 80 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--------------KEENKRILMDLDVVLKSHDCPYIVKCY 80 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--------------hHHHHHHHHHHHHHHhccCCCchHhhh
Confidence 468999999999999999999988899999999875411 123345667887777776799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++.+...+|+||||+. ++|.+.+.. ....+++..+..++.||+.||.|||+ .||+||||+|+||+++ .++.+|
T Consensus 81 ~~~~~~~~~~~v~e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~k 155 (296)
T cd06618 81 GYFITDSDVFICMELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVK 155 (296)
T ss_pred eeeecCCeEEEEeeccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEE
Confidence 99999999999999985 466655433 34579999999999999999999997 5999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcC-----CCCCcchHhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNK 328 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~DvwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~ 328 (574)
|+|||++.............+++.|+|||++.+. ++.++||||||+++|+|++|+.||..... .+.+..+....
T Consensus 156 L~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 235 (296)
T cd06618 156 LCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE 235 (296)
T ss_pred ECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC
Confidence 9999999766544444445688999999998643 57889999999999999999999965432 33444444433
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... .+....++.++.+||.+||..||.+||++.+++.||||....
T Consensus 236 ~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 236 PPS-LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred CCC-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 221 111124688999999999999999999999999999998643
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-40 Score=321.09 Aligned_cols=246 Identities=24% Similarity=0.391 Sum_probs=205.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|..+ .+..+|+|.+.... ...+.+.+|+.+++.+ +||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA----------------MSEEDFIEEAKVMMKL-SHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC----------------ccHHHHHHHHHHHHHC-CCCCceeEE
Confidence 35889999999999999999865 45689999876431 1235688899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+++||||+++|+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl 141 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKV 141 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEE
Confidence 9999999999999999999999887543 34689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||...+..+....+..+....
T Consensus 142 ~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~ 221 (256)
T cd05114 142 SDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY 221 (256)
T ss_pred CCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC
Confidence 999998765332221 22345668999998864 45889999999999999999 999998888777777776654322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ...+..+.+++.+||..+|.+|||+.++++
T Consensus 222 ~~---~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 222 RP---KLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CC---CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11 235788999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=325.79 Aligned_cols=258 Identities=21% Similarity=0.307 Sum_probs=207.7
Q ss_pred ccceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|++.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.+++.+ +||
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~~~ 69 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--------------LRERIEFLNEASVMKGF-TCH 69 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--------------HHHHHHHHHHHHHHHhC-CCC
Confidence 3589999999999999999997642 345899998764310 11234577899999999 599
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCc
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 241 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~N 241 (574)
||+++++++.+.+..|+||||+++|+|.+++.... ...++...+..++.||+.||.|||+++|+||||||+|
T Consensus 70 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~n 149 (288)
T cd05061 70 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN 149 (288)
T ss_pred CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChhe
Confidence 99999999999999999999999999999885422 1335677889999999999999999999999999999
Q ss_pred EEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCC
Q 008197 242 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKT 316 (574)
Q Consensus 242 ill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~ 316 (574)
||++ .++.+||+|||+++....... .....++..|+|||.+.+ .++.++|||||||++|+|++ |..||.+..
T Consensus 150 ili~---~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~ 226 (288)
T cd05061 150 CMVA---HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226 (288)
T ss_pred EEEc---CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9998 478899999999876533221 112345678999998764 56889999999999999998 899998877
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc------Ccccccc
Q 008197 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVREG 373 (574)
Q Consensus 317 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~------hp~~~~~ 373 (574)
..+....+..+..... ....++.+.+++.+||+.+|++|||+.++++ ||||+..
T Consensus 227 ~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 227 NEQVLKFVMDGGYLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 7666666654432111 1345789999999999999999999999987 9999764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=347.82 Aligned_cols=265 Identities=29% Similarity=0.497 Sum_probs=228.5
Q ss_pred CcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 89 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
....+..+.|++.+.||.|.+|+||+++++.+|+.+|||++... ....+++..|.+||+.+.+|
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~----------------~d~deEiE~eynil~~~~~h 75 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT----------------EDEEEEIELEYNMLKKYSHH 75 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC----------------ccccHHHHHHHHHHHhccCC
Confidence 33344556799999999999999999999999999999998764 23457788999999999999
Q ss_pred CCcceEEEEEE-----cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 169 ENVVKFYNAFE-----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 169 pniv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
||++.+|++|. .++.+|||||||.||++.|.+..-.+.++.|..+++|++.++.||.+||.+.++|||||-.|||
T Consensus 76 pnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiL 155 (953)
T KOG0587|consen 76 PNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVL 155 (953)
T ss_pred CCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEE
Confidence 99999999985 3678999999999999999997777889999999999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCC-CCccccccCccccchHhhhcC------CCCCcchHhHHHHHHHHHhCCCCCCCCC
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPFWDKT 316 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~DvwSlG~il~elltg~~Pf~~~~ 316 (574)
++ .++.|||+|||.+..+... ....+.+|||.|||||++... |...+|+||||++..||.-|.+|+.+.-
T Consensus 156 LT---~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH 232 (953)
T KOG0587|consen 156 LT---ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH 232 (953)
T ss_pred Ee---ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc
Confidence 99 5899999999999876543 345678999999999998642 3567999999999999999999998887
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 317 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+...+-.|.++.+. ....|..++.++.+||..||.+|-.+||+..++|.|||+++.
T Consensus 233 PmraLF~IpRNPPP-kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 233 PMRALFLIPRNPPP-KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred hhhhhccCCCCCCc-cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 76665555444322 222356778999999999999999999999999999999953
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=337.74 Aligned_cols=260 Identities=30% Similarity=0.501 Sum_probs=212.5
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.+.+.||.|+||.||+|++..++..||||++.... ........+.+|+.+++.+ +||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~iv~ 78 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-------------QSAIHAKRTYRELRLLKHM-DHENVIG 78 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-------------chhhHHHHHHHHHHHHHhc-cCCCHHH
Confidence 4568999999999999999999999999999999886431 0112335677899999999 5999999
Q ss_pred EEEEEEcCCE------EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDNY------VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~~------~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++...+. +|+|+||+ +++|.+.+. ..++++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~-- 152 (343)
T cd07851 79 LLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-- 152 (343)
T ss_pred HHHHhhccccccccccEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC--
Confidence 9988876554 99999999 679988773 25799999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++...... .....+|..|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+.
T Consensus 153 -~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~ 229 (343)
T cd07851 153 -EDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIM 229 (343)
T ss_pred -CCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 4788999999999765432 344578999999998764 45789999999999999999999998776665555544
Q ss_pred hCCCCCC-----------------------C----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 326 RNKPDFR-----------------------R----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 326 ~~~~~~~-----------------------~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
......+ . ..++.+++.+.+||.+||..+|.+|||+.+++.||||+.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 230 NLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred HhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence 3211100 0 0113468899999999999999999999999999999976543
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=322.99 Aligned_cols=253 Identities=28% Similarity=0.476 Sum_probs=206.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+..+|..||||.+..... ........+.+|+.+++.+ +||||++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~------------~~~~~~~~~~~e~~~l~~~-~h~~i~~~~ 68 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL------------MDAKARADCIKEIDLLKQL-NHPNVIKYY 68 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh------------hhHHHHHHHHHHHHHHHHc-cCCchhhhh
Confidence 368899999999999999999999999999998865321 1122345788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++..++..++||||+++++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+||+++ .++.+
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~ 145 (267)
T cd08229 69 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVV 145 (267)
T ss_pred heeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCE
Confidence 9999999999999999999999877432 235689999999999999999999999999999999999998 47789
Q ss_pred EEEeeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh--HHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~--~~~~~i~~~~~ 329 (574)
+|+|||++........ .....|+..|+|||++.+ ..+.++||||||+++|+|++|..||.+.... .....+...
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 223 (267)
T cd08229 146 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-- 223 (267)
T ss_pred EECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--
Confidence 9999999876543322 234579999999998865 4578899999999999999999999765432 222333222
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.++...+..+++.+.++|.+||..+|.+|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 1222233457889999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=319.47 Aligned_cols=256 Identities=28% Similarity=0.490 Sum_probs=209.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|++.+.||+|+||.||+|.+..+|..||+|.+..... ..........+.+|+.+++++ +||||++++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~----------~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~ 70 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPD----------SQETSKEVNALECEIQLLKNL-RHDRIVQYY 70 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcc----------cchhhHHHHHHHHHHHHHHHc-CCCCcceEE
Confidence 369999999999999999999999999999998754210 001123456788999999999 599999999
Q ss_pred EEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++.+ .+.+++|+||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||||+||+++ .++.+
T Consensus 71 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~ 145 (264)
T cd06653 71 GCLRDPEEKKLSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNV 145 (264)
T ss_pred EEEEcCCCCEEEEEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCE
Confidence 99876 3578999999999999988743 35689999999999999999999999999999999999998 47789
Q ss_pred EEEeeccccccCCC----CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 254 KATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 254 kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|+|||++...... .......|+..|+|||++.+. .+.++|||||||++|+|++|+.||..........++....
T Consensus 146 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 225 (264)
T cd06653 146 KLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQP 225 (264)
T ss_pred EECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCC
Confidence 99999999765321 122345789999999988654 5789999999999999999999998766555554444322
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
. .....+.+++.+.++|.+||. +|..||++.+++.|||.
T Consensus 226 ~--~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 226 T--KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred C--CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 1 122235688999999999999 57999999999999994
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=324.43 Aligned_cols=253 Identities=20% Similarity=0.309 Sum_probs=204.9
Q ss_pred cccceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
..++|++.+.||+|+||.||+|.+.. ++..||||.+.... .......+.+|+.+++.+ +|
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--------------~~~~~~~~~~e~~~l~~l-~~ 68 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--------------SMRERIEFLNEASVMKEF-NC 68 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--------------CHHHHHHHHHHHHHHHhC-CC
Confidence 34679999999999999999998642 35689999875431 012334678999999999 59
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCC
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~ 240 (574)
|||+++++++...+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.|++||||||+
T Consensus 69 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~ 148 (277)
T cd05062 69 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAAR 148 (277)
T ss_pred CCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchh
Confidence 999999999999999999999999999998875422 124678889999999999999999999999999999
Q ss_pred cEEEccCCCCCCeEEEeeccccccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCC
Q 008197 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDK 315 (574)
Q Consensus 241 Nill~~~~~~~~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~ 315 (574)
||+++ .++.++|+|||++......... ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.
T Consensus 149 Nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~ 225 (277)
T cd05062 149 NCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM 225 (277)
T ss_pred eEEEc---CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99998 4788999999998755332211 12356788999998865 46889999999999999999 78999887
Q ss_pred ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 316 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
........+....... .....++.+.+++.+||+.+|++|||+.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 226 SNEQVLRFVMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 7766666665543221 123567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=327.57 Aligned_cols=252 Identities=26% Similarity=0.342 Sum_probs=206.5
Q ss_pred cceeecccccccCCeEEEEEEE-----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|.+.+.||+|+||.||+|.+ ..++..||||.+.... .....+.+.+|+.+++++.+|||
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h~~ 100 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--------------HSSEREALMSELKIMSHLGNHEN 100 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--------------ChHHHHHHHHHHHHHHhccCCCC
Confidence 5799999999999999999975 2345689999886531 11234678899999999966999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++...+.+|+||||+++|+|.+++.......+++..+..++.||+.||.|||+++|+|+||||+|||++ .+
T Consensus 101 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~ 177 (302)
T cd05055 101 IVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HG 177 (302)
T ss_pred cceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CC
Confidence 999999999999999999999999999988654444589999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~ 325 (574)
+.+||+|||++........ .....+++.|+|||.+.+ .++.++||||+||++|+|++ |..||........+....
T Consensus 178 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~ 257 (302)
T cd05055 178 KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLI 257 (302)
T ss_pred CeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHH
Confidence 7899999999976543221 122356788999998764 46889999999999999998 999998776665555554
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...... ......++.+.+|+.+||..+|++|||+.+++.
T Consensus 258 ~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 258 KEGYRM--AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HcCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 433221 122356889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=327.51 Aligned_cols=255 Identities=33% Similarity=0.521 Sum_probs=209.3
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|.+.+.||.|+||.||+|+...+++.||||.+..... ........+|+..++++.+||||++++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--------------~~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 66 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY--------------SWEECMNLREVKSLRKLNEHPNIVKLKEV 66 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc--------------chhHHHHHHHHHHHHhccCCCCchhHHHH
Confidence 6788999999999999999988999999998865311 11222345789999999559999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+.+++..|+||||+ +|+|.+.+.......+++..+..++.|++.+|.|||++|++|+||+|+||+++ .++.++|+|
T Consensus 67 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d 142 (283)
T cd07830 67 FRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIAD 142 (283)
T ss_pred hhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEee
Confidence 99999999999999 78999888655445789999999999999999999999999999999999998 478999999
Q ss_pred eccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC---
Q 008197 258 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR--- 332 (574)
Q Consensus 258 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~--- 332 (574)
||++.............|+..|+|||++.. .++.++|+||||+++++|++|++||........+..+........
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd07830 143 FGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQD 222 (283)
T ss_pred cccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhh
Confidence 999987665545556678999999998743 358899999999999999999999977765554444332111000
Q ss_pred -----------------------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 333 -----------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 333 -----------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....+..+..+.+||.+||..+|.+|||+.+++.||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 223 WPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 00112346789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=350.29 Aligned_cols=248 Identities=22% Similarity=0.390 Sum_probs=212.9
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
...+..+.||+|+||+||+|+... ....||||.++... .....++|++|+++|..| +|||
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--------------~~~~~~dF~REaeLla~l-~H~n 550 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--------------ENQARQDFRREAELLAEL-QHPN 550 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--------------cHHHHHHHHHHHHHHHhc-cCCC
Confidence 345678899999999999997532 23579999987652 234678999999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------CC----CCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------DS----RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 238 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~----~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlk 238 (574)
||+|+|+|..++.+|+|+|||..|+|.++|.... +. +++..+...|+.||+.|+.||-++.+|||||-
T Consensus 551 IVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLA 630 (774)
T KOG1026|consen 551 IVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLA 630 (774)
T ss_pred eEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchh
Confidence 9999999999999999999999999999986432 12 38899999999999999999999999999999
Q ss_pred CCcEEEccCCCCCCeEEEeeccccccCCCCCcc---ccccCccccchHh-hhcCCCCCcchHhHHHHHHHHHh-CCCCCC
Q 008197 239 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC-GRRPFW 313 (574)
Q Consensus 239 p~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~-~~~~~~~~~DvwSlG~il~ellt-g~~Pf~ 313 (574)
+.|+|+. ++..|||+|||+++.+...+.+. ...-..+|||||. +.+++++++||||+||+|||+++ |+.||.
T Consensus 631 TRNCLVg---e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~ 707 (774)
T KOG1026|consen 631 TRNCLVG---ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYY 707 (774)
T ss_pred hhhceec---cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccc
Confidence 9999998 58999999999998775544332 2234568999995 56889999999999999999998 999999
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHH
Q 008197 314 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 364 (574)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~ 364 (574)
+.+.++++..|..+.. ...+ .+.|.++.+|+.+||+.+|++|||+++|
T Consensus 708 glSn~EVIe~i~~g~l-L~~P--e~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 708 GLSNQEVIECIRAGQL-LSCP--ENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred ccchHHHHHHHHcCCc-ccCC--CCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 9999999999988875 3332 4688999999999999999999999997
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-42 Score=311.14 Aligned_cols=260 Identities=28% Similarity=0.481 Sum_probs=214.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|.-..+||+|.||.||+|+.+.+|+.||+|++.-. ..+.. ......+|+++|..|. |+|++.++
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme----------neKeG---fpitalreikiL~~lk-Henv~nli 82 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME----------NEKEG---FPITALREIKILQLLK-HENVVNLI 82 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh----------ccccC---CcHHHHHHHHHHHHhc-chhHHHHH
Confidence 4678888999999999999999999999999976432 11222 2345689999999995 99999999
Q ss_pred EEEEc--------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 176 NAFED--------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 176 ~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+.|.. ...+|+||.+|+. +|.-.| .....+++..++..++.+++.||.|+|++.|+|||+||+|+||+
T Consensus 83 Eic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlL-sn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt-- 158 (376)
T KOG0669|consen 83 EICRTKATPTNRDRATFYLVFDFCEH-DLAGLL-SNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT-- 158 (376)
T ss_pred HHHhhccCCcccccceeeeeHHHhhh-hHHHHh-cCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc--
Confidence 88753 3459999999975 676655 33446899999999999999999999999999999999999999
Q ss_pred CCCCCeEEEeeccccccCC-----CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 248 KEDSSLKATDFGLSDFIKP-----GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.+||+|||+++.+.. ...++..+.|.+|++||.+.+ .++++.|||..|||+.||.||.+.+.+.++...
T Consensus 159 -~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqq 237 (376)
T KOG0669|consen 159 -KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQ 237 (376)
T ss_pred -CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHH
Confidence 589999999999965432 233556788999999998865 579999999999999999999999999998887
Q ss_pred HHHHHhCCCCCCCCCCCCC-------------------------------CHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 321 FKEVLRNKPDFRRKPWPSI-------------------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~-------------------------------~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
+..|..-...+....||++ .+++.+|+..||..||.+|+.++++|+|.|
T Consensus 238 l~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 238 LHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred HHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 7776554444555555432 236789999999999999999999999999
Q ss_pred ccccC
Q 008197 370 VREGG 374 (574)
Q Consensus 370 ~~~~~ 374 (574)
|....
T Consensus 318 F~kdp 322 (376)
T KOG0669|consen 318 FWKDP 322 (376)
T ss_pred hhcCC
Confidence 98754
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=325.77 Aligned_cols=256 Identities=33% Similarity=0.586 Sum_probs=212.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|.....||.|+||.||++.+..+|..||||++.... ......+.+|+.+++.+ +||||+++++.
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~iv~~~~~ 85 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---------------QQRRELLFNEVVIMRDY-QHENVVEMYNS 85 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---------------hhHHHHHHHHHHHHHhc-CCcchhheeeE
Confidence 444578999999999999999999999999875431 12345688999999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+...+..++||||+++++|.+.+. ...+++..+..++.|++.||.|||+.|++||||+|+||+++ .++.++|+|
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~d 159 (292)
T cd06657 86 YLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSD 159 (292)
T ss_pred EEeCCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcc
Confidence 999999999999999999988652 34689999999999999999999999999999999999998 467899999
Q ss_pred eccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 258 FGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 258 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
||++....... ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+.........+....+. ....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~ 238 (292)
T cd06657 160 FGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-KLKN 238 (292)
T ss_pred cccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCc-ccCC
Confidence 99987654322 2234578999999998764 4588999999999999999999999877665555554433222 1112
Q ss_pred CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 336 ~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
...+++.+.+++.+||..+|.+||++.+++.||||......
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 34578899999999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=329.06 Aligned_cols=257 Identities=28% Similarity=0.465 Sum_probs=206.8
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||.|+||.||+|.++.+|+.||||.+..... .......+.+|+.+++.+ +||||+++
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-------------~~~~~~~~~~e~~~~~~l-~h~~i~~~ 71 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-------------KEGFPITAIREIKILRQL-NHRNIVNL 71 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-------------ccCchHHHHHHHHHHHhC-CCCCeeee
Confidence 4579999999999999999999999999999999865311 012234567899999999 59999999
Q ss_pred EEEEEcCC----------EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 175 YNAFEDDN----------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 175 ~~~~~~~~----------~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
++++.+.. .+|+|+||+++ ++...+... ...+++..+..++.||+.||.|||+.||+||||||+||++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 149 (302)
T cd07864 72 KEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL 149 (302)
T ss_pred eheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 99987654 89999999976 777666433 4578999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCC--CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
+ +++.+||+|||++....... ......++..|+|||.+.+. .+.++|||||||++|+|++|++||........
T Consensus 150 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~ 226 (302)
T cd07864 150 N---NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ 226 (302)
T ss_pred C---CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 8 47899999999997654332 22334578889999988543 47899999999999999999999987665554
Q ss_pred HHHHHhCCCCCCC--------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 321 FKEVLRNKPDFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 321 ~~~i~~~~~~~~~--------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
+..+......... ..+..+|..+.++|.+||..+|.+|||+.+++.||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 4444332111000 1123568899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=326.74 Aligned_cols=254 Identities=31% Similarity=0.500 Sum_probs=208.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ........+.+|+.+++.+ +|||+++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-------------EKEGFPITAIREIKLLQKL-RHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-------------ccccchHHHHHHHHHHHhc-cCCCeeeheee
Confidence 678899999999999999999999999999997641 0112345678899999999 59999999999
Q ss_pred EEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 178 FEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 178 ~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+... +..++|+||+++ +|.+.+... ...+++..+..++.||+.||.|||+.|++|+||+|+||+++ +++.+||
T Consensus 67 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l 141 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKL 141 (287)
T ss_pred EecCCCCcEEEEeccccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEE
Confidence 9988 899999999974 888776433 25799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...+.......+.......
T Consensus 142 ~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07840 142 ADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSP 221 (287)
T ss_pred ccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998665432 2334567889999997754 35889999999999999999999998877766655554422111
Q ss_pred CCCCC--------------------------CC-CCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 332 RRKPW--------------------------PS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 332 ~~~~~--------------------------~~-~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....| .. +++.+.++|.+||..+|.+||++.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 222 TDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred chhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 11111 12 27889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=323.85 Aligned_cols=249 Identities=23% Similarity=0.365 Sum_probs=206.0
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..|.+.+.||.|+||.||++.+. .++..+|+|.+.... ......+.+|+.+++++ +|||
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~ 68 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---------------DNARKDFHREAELLTNL-QHEH 68 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---------------HHHHHHHHHHHHHHHhC-CCCC
Confidence 36899999999999999999852 345679999886531 12345688999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
|+++++++...+.+++||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||
T Consensus 69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp 148 (288)
T cd05093 69 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 148 (288)
T ss_pred cceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCc
Confidence 9999999999999999999999999999885432 13589999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCC
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWD 314 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~ 314 (574)
+|||++ .++.+||+|||++........ .....+++.|+|||++.+. ++.++|||||||++|+|++ |.+||..
T Consensus 149 ~Nili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~ 225 (288)
T cd05093 149 RNCLVG---ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 225 (288)
T ss_pred ceEEEc---cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999998 478999999999976543221 1233567889999988754 5889999999999999998 9999988
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 315 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.........+..+.... ....+++++.+|+.+||+.||.+|||+.+++.
T Consensus 226 ~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 226 LSNNEVIECITQGRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 87777777776654321 11357889999999999999999999999843
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=327.04 Aligned_cols=258 Identities=28% Similarity=0.449 Sum_probs=212.4
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+.|...+.||+|+||.||+|++..+|..||||++..... ........+.+|+.+++.+ +|||+++
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~h~~iv~ 85 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK------------QTNEKWQDIIKEVKFLQQL-KHPNTIE 85 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc------------CchHHHHHHHHHHHHHHhC-CCCCCcc
Confidence 34457778889999999999999999999999999865311 1122345678899999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+....|+||||+. |+|.+.+.. ...++++..+..++.||+.||.|||++||+||||+|+||+++ .++.+
T Consensus 86 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~ 160 (313)
T cd06633 86 YKGCYLKEHTAWLVMEYCL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQV 160 (313)
T ss_pred EEEEEEeCCEEEEEEecCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCE
Confidence 9999999999999999996 577776643 345789999999999999999999999999999999999998 47789
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
||+|||++..... .....|+..|+|||++. +.++.++|||||||++|+|++|..||...........+.....
T Consensus 161 kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~ 237 (313)
T cd06633 161 KLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS 237 (313)
T ss_pred EEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC
Confidence 9999999865322 23457899999999874 3457889999999999999999999988766555555544332
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+....+.++..+.+||.+||+.+|.+||++.+++.||||+...
T Consensus 238 --~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 238 --PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred --CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 2222345678899999999999999999999999999999743
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=372.02 Aligned_cols=257 Identities=33% Similarity=0.565 Sum_probs=215.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.-++.-+..||.|.||.||.|.+..+|...|+|.+...... ......+.+|+.++..| +|||+|+
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-------------~k~~~~i~eEm~vlE~l-nHpNlV~ 1298 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-------------HKTFKLIAEEMKVLEGL-NHPNLVR 1298 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-------------cccCcchHHHHHHHHhc-cCccccc
Confidence 334677788999999999999999999999999988765321 23445678999999999 6999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+|++-...+.++|.||||.||+|.+.+ ..++-.++...+.+..|++.|+.|||++|||||||||+||+|+ .+|.+
T Consensus 1299 YyGVEvHRekv~IFMEyC~~GsLa~ll--~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld---~~g~i 1373 (1509)
T KOG4645|consen 1299 YYGVEVHREKVYIFMEYCEGGSLASLL--EHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD---FNGLI 1373 (1509)
T ss_pred cCceeecHHHHHHHHHHhccCcHHHHH--HhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee---cCCcE
Confidence 999999999999999999999999977 4455677888899999999999999999999999999999999 47899
Q ss_pred EEEeeccccccCCCC-----CccccccCccccchHhhhcCC----CCCcchHhHHHHHHHHHhCCCCCCCCC-hhHHHHH
Q 008197 254 KATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKE 323 (574)
Q Consensus 254 kl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~----~~~~DvwSlG~il~elltg~~Pf~~~~-~~~~~~~ 323 (574)
|++|||.|..+.... ..+..+|||.|||||++.+.. ..+.||||||||..||+||+.||...+ +-.+...
T Consensus 1374 K~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1374 KYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred EeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 999999998876543 235679999999999997643 678999999999999999999996543 3344444
Q ss_pred HHhCC-CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 324 VLRNK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 324 i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+..+. +.++ ..+|.+..+||.+||..||++|+++.|++.|-|-+..
T Consensus 1454 V~~gh~Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1454 VAAGHKPQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred HhccCCCCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 44332 2222 2489999999999999999999999999999997653
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=335.22 Aligned_cols=258 Identities=33% Similarity=0.521 Sum_probs=207.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|.+...||+|+||.||+|++..+|+.||||++.+... .......+.+|+.+++.+ +||||+++
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~niv~~ 79 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-------------SEIFAKRAYRELTLLKHM-QHENVIGL 79 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-------------cccchhHHHHHHHHHHhc-CCCCccch
Confidence 4589999999999999999999999999999999865310 112234578899999999 59999999
Q ss_pred EEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 175 YNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 175 ~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
++++... ..+|+|+||+. .+|...+ ...+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~--- 151 (342)
T cd07879 80 LDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN--- 151 (342)
T ss_pred hheecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---
Confidence 9998754 35799999995 4665543 34689999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||++..... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..++.
T Consensus 152 ~~~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~ 229 (342)
T cd07879 152 EDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 229 (342)
T ss_pred CCCCEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478999999999876532 2234578999999998864 357899999999999999999999987765554444333
Q ss_pred CC-----------------------CCCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 327 NK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 327 ~~-----------------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
.. +.++.. .++..++.+.+||.+||+.||.+||++.+++.||||+.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 230 VTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 11 111111 124577889999999999999999999999999999876543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=335.94 Aligned_cols=259 Identities=32% Similarity=0.486 Sum_probs=213.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||+|++..+|..||||.+.... ........+.+|+.+++.+ +||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-------------DDLIDAKRILREIKLLRHL-RHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-------------ccchhhhhHHHHHHHHHhc-CCcchhhhhh
Confidence 5899999999999999999998899999999986531 0123346788999999999 5999999999
Q ss_pred EEEcCC-----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 177 AFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 177 ~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++.... .+|+||||++ ++|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++. ++
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~---~~ 140 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELME-TDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS---NC 140 (330)
T ss_pred hhcccCcccccceEEEecchh-hhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CC
Confidence 998765 8999999997 57887773 3348999999999999999999999999999999999999984 68
Q ss_pred CeEEEeeccccccCCCC----CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++|+|||++....... ......+|+.|+|||++.+. ++.++|||||||++|+|++|++||.+....+.+..+.
T Consensus 141 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~ 220 (330)
T cd07834 141 DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIV 220 (330)
T ss_pred CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence 99999999998765432 23455789999999988654 5789999999999999999999998887766655554
Q ss_pred hCCCCCCCC---------------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 326 RNKPDFRRK---------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 326 ~~~~~~~~~---------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
......... ..+.++..+.+||.+||+.+|.+|||+.+++.||||+....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 221 EVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred HhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 422111100 12346788999999999999999999999999999987544
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=321.46 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=210.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|.+.+.||.|+||.||+|.+.. +..+|+|.+.... ......+..|+.+++.+ +||||++++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---------------~~~~~~~~~e~~~l~~l-~~~~i~~~~ 68 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---------------LLKQQDFQKEVQALKRL-RHKHLISLF 68 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---------------hhhHHHHHHHHHHHhcC-CCcchhhee
Confidence 469999999999999999999877 8899999987542 12345688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+++||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl 145 (261)
T cd05148 69 AVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKV 145 (261)
T ss_pred eeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEE
Confidence 9999999999999999999999998765566789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||++........ .....++..|+|||.+.. .++.++||||||+++|+|++ |+.||......+.+..+.... .
T Consensus 146 ~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~---~ 222 (261)
T cd05148 146 ADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY---R 222 (261)
T ss_pred ccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC---c
Confidence 99999976543221 123346678999998764 45789999999999999998 899998877777777766432 2
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.....++.+.++|.+||+.+|.+|||+.++++
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 2223567899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-41 Score=313.79 Aligned_cols=257 Identities=25% Similarity=0.475 Sum_probs=219.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|.+++.||+|+|++|.+++++.|.+.+|+|++++.-. ...+...=++.|-.+..+-++||.+|.+.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~------------nddedidwvqtek~vfe~asn~pflvglh 317 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV------------NDDEDIDWVQTEKHVFEQASNNPFLVGLH 317 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc------------CCcccchhHHhhHHHHHhccCCCeEEehh
Confidence 469999999999999999999999999999999987521 12234445678888888888999999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
.+|+++..+++|.||++||+|.-++ +....+++++++.+...|+.||.|||+.|||+||||.+|+|++. .+++||
T Consensus 318 scfqtesrlffvieyv~ggdlmfhm--qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda---eghikl 392 (593)
T KOG0695|consen 318 SCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA---EGHIKL 392 (593)
T ss_pred hhhcccceEEEEEEEecCcceeeeh--hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc---CCceee
Confidence 9999999999999999999997666 55578999999999999999999999999999999999999994 799999
Q ss_pred Eeeccccc-cCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCC-------CC-ChhHHHHHHH
Q 008197 256 TDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFW-------DK-TEDGIFKEVL 325 (574)
Q Consensus 256 ~DFG~a~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~-------~~-~~~~~~~~i~ 325 (574)
+|+|+++. +.++..+.++||||.|+|||++.+. |+..+|+|+|||+++||+.|+.||. +. +++-+++-|+
T Consensus 393 tdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvil 472 (593)
T KOG0695|consen 393 TDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL 472 (593)
T ss_pred cccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh
Confidence 99999975 5677778899999999999999875 7899999999999999999999993 12 2233444455
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC------HHHHhcCcccccc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG 373 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps------~~~~l~hp~~~~~ 373 (574)
......+ ..+|-.+..+++..|.+||..|.. ..++-.|+||+..
T Consensus 473 ekqirip----rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 473 EKQIRIP----RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred hhccccc----ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 4443333 246777889999999999999964 6789999999864
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=331.57 Aligned_cols=259 Identities=29% Similarity=0.429 Sum_probs=205.6
Q ss_pred ceeecccccccCCeEEEEEEEcCC--CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
+|.+.+.||+|+||.||+|.+..+ +..||||.+.... ........+.+|+.+++++.+||||+++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l~~h~~iv~~ 67 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-------------SKKILAKRALRELKLLRHFRGHKNITCL 67 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-------------ccchhHHHHHHHHHHHHHhcCCCChhee
Confidence 488999999999999999999888 8999999886421 0112345678899999999779999999
Q ss_pred EEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 175 YNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 175 ~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
++.+.. ...+|+++||+. ++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 68 ~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~ 141 (332)
T cd07857 68 YDMDIVFPGNFNELYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---AD 141 (332)
T ss_pred eeeeeeccccCCcEEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CC
Confidence 987542 356889999985 68888773 346799999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCC-----CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
+.+||+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||........+..
T Consensus 142 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~ 221 (332)
T cd07857 142 CELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQ 221 (332)
T ss_pred CCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHH
Confidence 889999999997654321 1234579999999998754 458899999999999999999999977654433333
Q ss_pred HHhCCC-----------------------CCC----CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 324 VLRNKP-----------------------DFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 324 i~~~~~-----------------------~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
++.... ..+ ...++..+..+.+||.+||+.||.+|||+.+++.||||++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 222 ILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred HHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 222100 000 112345678999999999999999999999999999997643
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=323.07 Aligned_cols=260 Identities=33% Similarity=0.536 Sum_probs=217.5
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+..+.|.+...||.|+||.||+|.+..++..||+|++.... ...+.+.+|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~----------------~~~~~~~~e~~~l~~l-~~~~i~ 78 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK----------------QNKELIINEILIMKDC-KHPNIV 78 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCc----------------hhHHHHHHHHHHHHHC-CCCCee
Confidence 34567999999999999999999998889999999987541 1345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++.+...+..|+|+||++|++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++ .++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~ 154 (286)
T cd06614 79 DYYDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGS 154 (286)
T ss_pred EEEEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCC
Confidence 99999999999999999999999999885432 3799999999999999999999999999999999999998 4778
Q ss_pred eEEEeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
++|+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 155 ~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd06614 155 VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP 234 (286)
T ss_pred EEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence 9999999886543321 22345688999999987654 588999999999999999999999877665555555443321
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.....+.++..+.+||.+||+.+|.+|||+.+++.||||+...
T Consensus 235 -~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 235 -PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred -CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 1112234788999999999999999999999999999999854
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=323.33 Aligned_cols=251 Identities=19% Similarity=0.295 Sum_probs=204.9
Q ss_pred cceeecccccccCCeEEEEEEEc----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|+.+++.+ +||||
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~ni 69 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--------------NPQQWGEFQQEASLMAEL-HHPNI 69 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--------------CHHHHHHHHHHHHHHhhC-CCCCe
Confidence 35899999999999999999853 356789999886431 112345688999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrD 236 (574)
+++++++..+...|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+|||
T Consensus 70 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 149 (283)
T cd05090 70 VCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKD 149 (283)
T ss_pred eeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhc
Confidence 999999999999999999999999999875322 13478899999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCC
Q 008197 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRP 311 (574)
Q Consensus 237 lkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~P 311 (574)
|||+|||++ .++.+||+|||++....... ......++..|+|||++.+ .++.++|||||||++|+|++ |..|
T Consensus 150 lkp~nili~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p 226 (283)
T cd05090 150 LAARNILIG---EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP 226 (283)
T ss_pred cccceEEEc---CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 999999998 46789999999997653322 1233456778999998864 46889999999999999998 9999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
|.+.....+...+..... ......+++.+.+++.+||..+|.+||++.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 227 YYGFSNQEVIEMVRKRQL---LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 988776666555544332 12234578999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=314.12 Aligned_cols=251 Identities=33% Similarity=0.567 Sum_probs=211.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|.+.+.||.|++|.||+|.+..++..|++|++..... .....+.+|+.+++.+. ||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------------~~~~~~~~e~~~l~~l~-~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---------------EKKEKIINEIQILKKCK-HPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---------------hHHHHHHHHHHHHHhCC-CCCEeEEEE
Confidence 37888999999999999999988999999999876421 24567889999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
.+......++++||+++++|.+.+.... ..+++..+..++.|++.||.+||.+|++||||+|+||+++ .++.++|+
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~ 140 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLI 140 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEe
Confidence 9999999999999999999988774432 5789999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCC
Q 008197 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335 (574)
Q Consensus 257 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 335 (574)
|||.+.............|+..|+|||.+.+. .+.++||||||+++|+|++|+.||...+.......+..... +...
T Consensus 141 d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~ 218 (253)
T cd05122 141 DFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP--PGLR 218 (253)
T ss_pred eccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC--CCcC
Confidence 99999876554434456789999999988654 57889999999999999999999987755444444433221 1111
Q ss_pred C-CCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 336 W-PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 336 ~-~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
. ..++..+.++|.+||+.||++|||+.+++.|||
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 1 224788999999999999999999999999999
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=318.53 Aligned_cols=247 Identities=24% Similarity=0.366 Sum_probs=204.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+.. +..+|||.+.... ...+.+.+|+.+++.+ +||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~~ 65 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS----------------MSEDEFIEEAKVMMKL-SHEKLVQLY 65 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc----------------ccHHHHHHHHHHHhcC-CCCCeeeEE
Confidence 368999999999999999997643 4569999886531 1235688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.....+++||||+++|+|.+++... ...+++..+..++.||+.||.|||+.|++|+||||+||+++ .++.+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl 141 (256)
T cd05113 66 GVCTKQRPIYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKV 141 (256)
T ss_pred EEEccCCCcEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEE
Confidence 9999999999999999999999987543 34789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++......... ....++..|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+...+
T Consensus 142 ~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 221 (256)
T cd05113 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY 221 (256)
T ss_pred CCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC
Confidence 999998765432211 12345678999999864 56889999999999999998 999998777777777776654332
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.. ...+..+.+++.+||..+|.+||++.+++.+
T Consensus 222 ~~---~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 222 RP---HLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 22 3457899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=333.31 Aligned_cols=259 Identities=31% Similarity=0.485 Sum_probs=207.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.+.+.||+|+||.||+|.+..+|+.||||++.+... .....+.+.+|+.+++++ +||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~Ei~~l~~l-~h~~iv~ 80 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-------------SIIHAKRTYRELRLLKHM-KHENVIG 80 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-------------hhHHHHHHHHHHHHHHHc-CCCcccc
Confidence 45789999999999999999999999999999999865311 112345677899999999 5999999
Q ss_pred EEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++... ...|++++++ |++|.+.+. ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~-- 154 (345)
T cd07877 81 LLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-- 154 (345)
T ss_pred eeeeeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc--
Confidence 99988643 3578888887 788877652 24689999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++..... ......||+.|+|||.+.+ .++.++|||||||++|+|++|+.||...........+.
T Consensus 155 -~~~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (345)
T cd07877 155 -EDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 231 (345)
T ss_pred -CCCCEEEecccccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 478899999999876532 2344578999999998755 35788999999999999999999997765544443332
Q ss_pred hCCC-----------------------CCCC----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 326 RNKP-----------------------DFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 326 ~~~~-----------------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.... ..+. ..+...++++.+||.+||+.||.+||++.+++.||||++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~ 308 (345)
T cd07877 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 308 (345)
T ss_pred HHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCC
Confidence 2110 0000 011245788999999999999999999999999999997544
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=326.28 Aligned_cols=259 Identities=27% Similarity=0.452 Sum_probs=214.3
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
...+.|...+.||+|+||.||+|++..+|..||+|.+..... ........+.+|+.+++.+ +|||++
T Consensus 22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~iv 88 (317)
T cd06635 22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK------------QSNEKWQDIIKEVKFLQRI-KHPNSI 88 (317)
T ss_pred CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------------CchHHHHHHHHHHHHHHhC-CCCCEE
Confidence 344568899999999999999999999999999999865311 1122345788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++..+...|+||||++| +|.+.+.. ...++++..+..++.||+.||.|||+++|+||||+|+||+++ .++.
T Consensus 89 ~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~ 163 (317)
T cd06635 89 EYKGCYLREHTAWLVMEYCLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQ 163 (317)
T ss_pred EEEEEEeeCCeEEEEEeCCCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCC
Confidence 999999999999999999974 77776643 345689999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||++...... ....|++.|+|||++. +..+.++|||||||++|+|++|+.||...........+....
T Consensus 164 ~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 240 (317)
T cd06635 164 VKLADFGSASIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 240 (317)
T ss_pred EEEecCCCccccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcc
Confidence 999999998754332 3457899999999873 346789999999999999999999998876666666665543
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... .....+++.+.+||.+||..+|.+||++.++++|||+....
T Consensus 241 ~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 241 SPT--LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred CCC--CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 221 12235678899999999999999999999999999997644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=325.27 Aligned_cols=252 Identities=24% Similarity=0.358 Sum_probs=206.7
Q ss_pred cceeecccccccCCeEEEEEEEcCC-----CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++.+.||+|+||.||++.+... ...+|+|.+.... .......+.+|+.+++.+.+|||
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h~~ 77 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--------------TEKDLSDLVSEMEMMKMIGKHKN 77 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--------------CHHHHHHHHHHHHHHHhhcCCCC
Confidence 5799999999999999999987643 3689999886531 11234568899999999956999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrD 236 (574)
|+++++++..++.+++||||+++|+|.+++... ....+++..+..++.||+.||.|||+++|+|||
T Consensus 78 i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~d 157 (293)
T cd05053 78 IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRD 157 (293)
T ss_pred eeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 999999999999999999999999999988542 235689999999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCC
Q 008197 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRP 311 (574)
Q Consensus 237 lkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~P 311 (574)
|||+|||++ .++.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..|
T Consensus 158 lkp~Nil~~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 234 (293)
T cd05053 158 LAARNVLVT---EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234 (293)
T ss_pred cceeeEEEc---CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCC
Confidence 999999998 478999999999986643221 122335678999998754 46889999999999999997 9999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
|.+....+....+..... . ......+..+.+|+.+||..+|.+|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 235 YPGIPVEELFKLLKEGYR-M--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CCCCCHHHHHHHHHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 988777666666554321 1 1223567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=317.63 Aligned_cols=253 Identities=26% Similarity=0.468 Sum_probs=206.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... ......+.+.+|+.+++++ +||||++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~~~ei~~l~~~-~~~~i~~~~ 68 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM------------MDAKARQDCLKEIDLLKQL-DHPNVIKYL 68 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc------------cchhhHHHHHHHHHHHHhC-CCCCeeeee
Confidence 479999999999999999999998999999998865311 1122356788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++...+..++||||+++++|.+++... ....+++..+..++.||+.||.|||+.||+||||+|+||+++ .++.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~ 145 (267)
T cd08224 69 ASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVV 145 (267)
T ss_pred eeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcE
Confidence 9999999999999999999999887532 235689999999999999999999999999999999999998 47889
Q ss_pred EEEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~ 329 (574)
+|+|||++....... ......|++.|+|||.+.+ .++.++|||||||++|+|++|+.||..... ......+..+.
T Consensus 146 ~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 224 (267)
T cd08224 146 KLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD- 224 (267)
T ss_pred EEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC-
Confidence 999999987654322 2234578999999998765 457899999999999999999999965432 23333333322
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
++..+.+.++..+.++|.+||..+|++|||+.++++
T Consensus 225 -~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 225 -YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred -CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 222223357789999999999999999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-39 Score=315.22 Aligned_cols=253 Identities=32% Similarity=0.539 Sum_probs=211.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||+|++|.||+|.+..++..|++|++..... .....+.+.+|+.+++++ +||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-------------SEEELEALEREIRILSSL-QHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-------------chHHHHHHHHHHHHHHHc-CCCCEeeEEE
Confidence 47888999999999999999998999999999876421 123457789999999999 5999999999
Q ss_pred EEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
.+... ..+++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~---~~~~~ 141 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS---DGVVK 141 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC---CCCEE
Confidence 99988 8999999999999999887543 38999999999999999999999999999999999999984 78999
Q ss_pred EEeeccccccCCCCC---ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~-~~~~~~~i~~~~~ 329 (574)
|+|||.+........ .....++..|+|||.+... .+.++||||||+++|+|++|..||.... .......+....
T Consensus 142 l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~- 220 (260)
T cd06606 142 LADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSG- 220 (260)
T ss_pred EcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccC-
Confidence 999999987655442 3456789999999988755 6889999999999999999999997665 222222222111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.. ......++..+.+||.+||..+|.+||++.+++.||||
T Consensus 221 ~~-~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 221 EP-PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CC-cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 11 11123568899999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=333.21 Aligned_cols=255 Identities=26% Similarity=0.367 Sum_probs=199.8
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
...++.|.-...||+|+||.||+|.. .+|..||||.+..... .. ..+|.+|+.++.+++ |||+
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~--------------~~-~~eF~~Ei~~ls~l~-H~Nl 133 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSG--------------QG-EREFLNEVEILSRLR-HPNL 133 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCC--------------cc-hhHHHHHHHHHhcCC-CcCc
Confidence 44667888889999999999999985 4558999998765411 00 345999999999995 9999
Q ss_pred ceEEEEEEcCC-EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CEeecCCCCcEEEccC
Q 008197 172 VKFYNAFEDDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSA 247 (574)
Q Consensus 172 v~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~ 247 (574)
|+++|||.+.+ ..+||+||+++|+|.++|......+++|.....|+.+++.||+|||... ||||||||+|||||
T Consensus 134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD-- 211 (361)
T KOG1187|consen 134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD-- 211 (361)
T ss_pred ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC--
Confidence 99999999988 5999999999999999997654338999999999999999999999853 99999999999999
Q ss_pred CCCCCeEEEeeccccccCC-CCCcccc-ccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCC---hhHHH
Q 008197 248 KEDSSLKATDFGLSDFIKP-GKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIF 321 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~-~~~~~~~-~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~---~~~~~ 321 (574)
++..+||+|||+|+.... ....... .||.+|+|||++. +..+.++|||||||+|.||+||+.|..... ...+.
T Consensus 212 -~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 212 -EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred -CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 589999999999976654 3333333 8999999999886 567999999999999999999998886432 11111
Q ss_pred H---HHHhCC--CCCCCCCC--CCCC--H---HHHHHHHHccccCCCCCCCHHHHhc
Q 008197 322 K---EVLRNK--PDFRRKPW--PSIS--N---SAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 322 ~---~i~~~~--~~~~~~~~--~~~~--~---~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. ..+... ..+..+.. ...+ . .+..+..+|++.+|..||++.+++.
T Consensus 291 ~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 291 EWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 1 122211 01111111 1222 1 2567889999999999999998643
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=329.07 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=201.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCE----EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+|++.+.||+|+||.||+|.+..+|.. ||||.+.... .....+.+.+|+.+++.+ +||||
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~ni 71 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--------------SPKANKEILDEAYVMASV-DNPHV 71 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--------------CHHHHHHHHHHHHHHHhC-CCCCC
Confidence 4699999999999999999998766654 8999886431 123346788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++... ..++|+||+++|+|.+++... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++
T Consensus 72 v~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~ 146 (316)
T cd05108 72 CRLLGICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQ 146 (316)
T ss_pred CeEEEEEcCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCC
Confidence 9999998865 478999999999999988543 34688999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||++......... ....++..|+|||++.+ .++.++|||||||++|||++ |..||.+....+.. .++.
T Consensus 147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~ 225 (316)
T cd05108 147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILE 225 (316)
T ss_pred cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHh
Confidence 8999999999876543321 22344678999998764 46889999999999999997 99999776655443 3444
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.....+. .+..+..+.+++.+||..+|.+|||+.+++.+
T Consensus 226 ~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 226 KGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3332222 24567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=318.88 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=206.7
Q ss_pred cceeecccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++.+.||+|+||.||+|.+..+ ...||||.+.... .......+.+|+.+++.+ +||||+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~ 68 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--------------SDKQRLDFLTEASIMGQF-DHPNII 68 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--------------ChHHHHHHHHHHHHHHhC-CCCCcc
Confidence 4689999999999999999988654 4589999886531 123345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++.+...+..++||||+++++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+|||++ .++.
T Consensus 69 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~ 144 (266)
T cd05033 69 RLEGVVTKSRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLV 144 (266)
T ss_pred eEeEEEecCCceEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCC
Confidence 9999999999999999999999999887543 34789999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCC-Cc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008197 253 LKATDFGLSDFIKPGK-KF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~-~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~ 327 (574)
++|+|||++....... .. ....+++.|+|||.+.+ .++.++||||||+++|+|++ |..||...........+...
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~ 224 (266)
T cd05033 145 CKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG 224 (266)
T ss_pred EEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC
Confidence 9999999998764211 11 12345678999998864 46889999999999999998 99999887777776666544
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
... +.....++.+.+|+.+||+.+|.+||++.+++++
T Consensus 225 ~~~---~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 225 YRL---PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred CCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 221 1224578899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=318.66 Aligned_cols=246 Identities=25% Similarity=0.360 Sum_probs=202.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|++.+.||+|+||.||+|.+..+ ..||+|.+.... ...+.+.+|+.+++.+ +||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~----------------~~~~~~~~E~~~l~~l-~~~~i~~~~ 67 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT----------------MSPEAFLQEAQVMKKL-RHEKLVQLY 67 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc----------------cCHHHHHHHHHHHHhC-CCCCcceEE
Confidence 5799999999999999999987655 469999987531 1235688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+.+.. ...|+||||+++|+|.+++.......+++..+..++.|++.||.|||+.+|+||||||+||+++ .++.+||
T Consensus 68 ~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L 143 (262)
T cd05071 68 AVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKV 143 (262)
T ss_pred EEECC-CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEe
Confidence 98754 5589999999999999988654455689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++........ .....++..|+|||+..+ .++.++|||||||++|+|++ |..||.+.........+.....
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-- 221 (262)
T cd05071 144 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-- 221 (262)
T ss_pred ccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC--
Confidence 99999976543322 123456778999998754 56889999999999999999 8999988777666666654322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
....+.++..+.+|+.+||..+|.+||++.+++.
T Consensus 222 -~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 222 -MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -CCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 1112457889999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=356.95 Aligned_cols=149 Identities=30% Similarity=0.491 Sum_probs=132.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+++.||.|+||.||+|.+..+++.||||++..... ........+..|+.++..+ +||||++++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~ 70 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM------------INKNMVHQVQAERDALALS-KSPFIVHLY 70 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc------------cCHHHHHHHHHHHHHHHhc-CCCCcCeEE
Confidence 479999999999999999999999999999999875421 1123346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+||||||+.|++|.+++.. ...+++..++.++.||+.||.|||.++||||||||+|||++ .++.+||
T Consensus 71 ~~~~~~~~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~---~~g~vkL 145 (669)
T cd05610 71 YSLQSANNVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS---NEGHIKL 145 (669)
T ss_pred EEEEECCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc---CCCCEEE
Confidence 999999999999999999999998743 45789999999999999999999999999999999999998 4789999
Q ss_pred Eeecccc
Q 008197 256 TDFGLSD 262 (574)
Q Consensus 256 ~DFG~a~ 262 (574)
+|||+++
T Consensus 146 ~DFGls~ 152 (669)
T cd05610 146 TDFGLSK 152 (669)
T ss_pred EeCCCCc
Confidence 9999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=316.84 Aligned_cols=243 Identities=23% Similarity=0.345 Sum_probs=198.1
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|+||.||+|.++.+++.||+|.+.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--------------PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--------------CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCC
Confidence 36999999999999999999999999876431 123345788999999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
..+|+||||+++++|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~ 141 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMS 141 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccC
Confidence 999999999999999988743 235689999999999999999999999999999999999998 4778999999998
Q ss_pred cccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008197 262 DFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336 (574)
Q Consensus 262 ~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 336 (574)
......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+..... ....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~ 218 (252)
T cd05084 142 REEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR---LPCP 218 (252)
T ss_pred cccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---CCCc
Confidence 754432111 11123456999998764 46888999999999999998 9999977666555555544322 1222
Q ss_pred CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 337 PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 337 ~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...+..+.+|+.+||..+|++|||+.++++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 456889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=314.22 Aligned_cols=252 Identities=34% Similarity=0.583 Sum_probs=213.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||+|++|.||+|.+..+++.||+|.+..... .....+.+.+|+++++++ .|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-------------KEEALKSIMQEIDLLKNL-KHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-------------CHHHHHHHHHHHHHHHhC-CCCCccEEEE
Confidence 48899999999999999999998999999999876521 123456789999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++.+.+.+++||||+++++|.+.+... ..+++..+..++.|++.||.|||+.||+||||+|+||+++. ++.++|+
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~---~~~~~l~ 141 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK---DGVVKLA 141 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC---CCCEEEe
Confidence 999999999999999999999887433 67999999999999999999999999999999999999984 7899999
Q ss_pred eeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++........ .....|+..|+|||.+.+. ++.++||||+|+++|+|++|..||...........+..... ..
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~ 218 (254)
T cd06627 142 DFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH---PP 218 (254)
T ss_pred ccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC---CC
Confidence 9999987654332 2345789999999987654 57889999999999999999999987665444444433221 12
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+.++..+.+++.+||..+|++|||+.+++.||||
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 219 LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 224678899999999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=320.80 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=205.6
Q ss_pred cceeecccccccCCeEEEEEEEcCC-----CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|.+.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.+ +|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--------------~~~~~~~~~~e~~~l~~~-~~~~ 70 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--------------SMRERIEFLNEASVMKEF-NCHH 70 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--------------CHHHHHHHHHHHHHHHhC-CCCc
Confidence 5799999999999999999987643 3789999976431 112345678999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
|+++++++......++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus 71 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~ni 150 (277)
T cd05032 71 VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNC 150 (277)
T ss_pred eeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheE
Confidence 9999999999999999999999999999885432 23478889999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCCh
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTE 317 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~ 317 (574)
|++ .++.+||+|||+++....... .....+|..|+|||.+. +.++.++|||||||++|+|++ |..||.+.+.
T Consensus 151 ll~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 227 (277)
T cd05032 151 MVA---EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227 (277)
T ss_pred EEc---CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence 998 478999999999876543321 22345788999999875 456889999999999999998 9999988877
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+..... ... ....+..+.+++.+||..+|++|||+.+++.
T Consensus 228 ~~~~~~~~~~~~-~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 228 EEVLKFVIDGGH-LDL--PENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHhcCCC-CCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 777666653321 111 1346889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=333.27 Aligned_cols=264 Identities=31% Similarity=0.469 Sum_probs=210.3
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|.+.+.||.|+||.||+|.+..+|..||||++..... .......+.+|+.+++++.+||||+
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-------------~~~~~~~~~~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-------------NATDAQRTFREIMFLQELGDHPNIV 70 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-------------cchhhhhhhHHHHHHHHhcCCCCcc
Confidence 355789999999999999999999988999999998854210 1123345778999999995599999
Q ss_pred eEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 173 KFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 173 ~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
++++++.. ...+|+||||++ ++|..++.. ..+++..+..++.||+.||.|||++||+||||||+||+++ .+
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~ 143 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SD 143 (337)
T ss_pred ceeeeeccCCCceEEEEecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CC
Confidence 99999864 347899999997 588887632 2788999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCC------CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 251 SSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
+.+||+|||++....... ......||+.|+|||++.+ ..+.++|||||||++|+|++|++||.+........
T Consensus 144 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~ 223 (337)
T cd07852 144 CRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLE 223 (337)
T ss_pred CcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 899999999987653322 2234578999999998753 35788999999999999999999997765544333
Q ss_pred HHHhCCCC---------------------------CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 323 EVLRNKPD---------------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 323 ~i~~~~~~---------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.+...... ......+.++.++.++|.+||+.+|.+|||+.++++||||+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 224 KIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred HHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence 33221110 011123457889999999999999999999999999999987544
Q ss_pred C
Q 008197 376 A 376 (574)
Q Consensus 376 ~ 376 (574)
.
T Consensus 304 ~ 304 (337)
T cd07852 304 P 304 (337)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=324.68 Aligned_cols=254 Identities=33% Similarity=0.517 Sum_probs=208.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|.+.+.||.|++|.||+|.+..+|+.+|+|.+..... .......+.+|+.+++.+. ||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-------------SEGIPKTALREIKLLKELN-HPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-------------cchhHHHHHHHHHHHHHhc-CCCcchHHHh
Confidence 5678899999999999999988999999999865411 1123457788999999994 9999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+.+++.+++|+||+++ +|.+.+... ...+++..+..++.||+.||.|||+++|+|+||||+||+++ .++.++|+|
T Consensus 67 ~~~~~~~~~v~e~~~~-~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~d 141 (283)
T cd05118 67 FRHKGDLYLVFEFMDT-DLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLAD 141 (283)
T ss_pred hccCCCEEEEEeccCC-CHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEee
Confidence 9999999999999975 888776543 36799999999999999999999999999999999999998 478899999
Q ss_pred eccccccCCCC-CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC--
Q 008197 258 FGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-- 332 (574)
Q Consensus 258 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~-- 332 (574)
||.+....... ......++..|+|||.+.+. ++.++||||||+++|+|++|+.||...+..+.+..+........
T Consensus 142 f~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd05118 142 FGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPE 221 (283)
T ss_pred eeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchH
Confidence 99997665433 33345788999999988653 57889999999999999999999987766554444432211100
Q ss_pred ------------------------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 333 ------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 333 ------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
...++.++.++.+||.+||.+||.+||++.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 222 VWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 01123467889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=325.43 Aligned_cols=259 Identities=28% Similarity=0.453 Sum_probs=212.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
...+.|...+.||.|+||.||+|+++.++..||||.+..... ........+.+|+.+++.+ +|||++
T Consensus 12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~ 78 (308)
T cd06634 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK------------QSNEKWQDIIKEVRFLQKL-RHPNTI 78 (308)
T ss_pred CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc------------cChHHHHHHHHHHHHHHhC-CCCCcc
Confidence 344578889999999999999999999999999998864210 1112345678899999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++......++||||+. |+|.+.+... ..++++..+..++.|++.||.|||+.+++||||+|+||+++ .++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~ 153 (308)
T cd06634 79 QYRGCYLREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGL 153 (308)
T ss_pred cEEEEEEcCCeeEEEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCc
Confidence 99999999999999999996 5777766433 35689999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||++...... ....|++.|+|||.+. +..+.++|||||||++|+|++|..||...........+....
T Consensus 154 ~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 230 (308)
T cd06634 154 VKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 230 (308)
T ss_pred EEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC
Confidence 999999998765432 2457889999999874 345789999999999999999999998766555555444433
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. ......++..+.+||.+||..+|.+||++.+++.|||+....
T Consensus 231 ~~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 231 SP--ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred CC--CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 21 111235778899999999999999999999999999998753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=323.47 Aligned_cols=253 Identities=21% Similarity=0.247 Sum_probs=205.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCC----------------CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHH
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG----------------DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~----------------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 159 (574)
.+|++++.||+|+||.||+|.+..++ ..||+|.+..... ....+.+.+|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--------------~~~~~~~~~e~ 70 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--------------DNAREDFLKEV 70 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--------------HHHHHHHHHHH
Confidence 47999999999999999999876543 5689998875421 13456788999
Q ss_pred HHHHHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 008197 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLH 230 (574)
Q Consensus 160 ~il~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~l~~LH~~ 230 (574)
.+++.+ .||||+++++++..++.+++||||+++++|.+++.... ...+++..+..++.|++.||.|||++
T Consensus 71 ~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~ 149 (296)
T cd05051 71 KILSRL-SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL 149 (296)
T ss_pred HHHHhc-CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999 59999999999999999999999999999999885432 12689999999999999999999999
Q ss_pred CCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHH
Q 008197 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306 (574)
Q Consensus 231 ~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ell 306 (574)
||+||||||+||+++. ++.++|+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|+
T Consensus 150 ~i~H~dlkp~Nili~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 150 NFVHRDLATRNCLVGK---NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred CccccccchhceeecC---CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHH
Confidence 9999999999999984 68999999999976543321 234466788999998765 6789999999999999999
Q ss_pred h--CCCCCCCCChhHHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 307 C--GRRPFWDKTEDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 307 t--g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+ |..||...+....+..+... .........+..|.++.+++.+||+.||.+|||+.++++
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 227 TLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 8 78899777766666655433 111111122356789999999999999999999999954
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=328.73 Aligned_cols=256 Identities=28% Similarity=0.405 Sum_probs=203.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||.|+||.||+|.+..+++.||||.+..... .......+.+|+.+++.+ +||||++++
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 73 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE-------------KDGFPITALREIKILKKL-KHPNVVPLI 73 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC-------------CCCcchhHHHHHHHHHhc-CCCCccchh
Confidence 589999999999999999999999999999998865311 011223567899999999 599999999
Q ss_pred EEEEc--------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 176 NAFED--------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 176 ~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++.. ...+++|+||+.+ +|...+.. ....+++..+..++.||+.||.|||+.||+||||||+||+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~-- 149 (311)
T cd07866 74 DMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID-- 149 (311)
T ss_pred hheecccccccccCceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--
Confidence 98754 3357999999964 67666543 345799999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCC------------CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCC
Q 008197 248 KEDSSLKATDFGLSDFIKPGK------------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFW 313 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~------------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~ 313 (574)
.++.+||+|||++....... ......|++.|+|||++.+ .++.++|||||||++|+|++|++||.
T Consensus 150 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~ 228 (311)
T cd07866 150 -NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228 (311)
T ss_pred -CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence 47899999999997543221 1223467889999998754 35788999999999999999999998
Q ss_pred CCChhHHHHHHHhCCCCCCCC--------------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 314 DKTEDGIFKEVLRNKPDFRRK--------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+.+.......+.......... .+..+++.+.+||.+||..+|.+|||+.+++.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 229 GKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 877666555544321111000 112345678999999999999999999999999
Q ss_pred ccc
Q 008197 368 PWV 370 (574)
Q Consensus 368 p~~ 370 (574)
|||
T Consensus 309 ~~f 311 (311)
T cd07866 309 PYF 311 (311)
T ss_pred CCC
Confidence 998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=328.33 Aligned_cols=257 Identities=23% Similarity=0.310 Sum_probs=199.8
Q ss_pred eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
.+++.+|.| |.||++++..+|+.||||++.... ........+.+|+.+++.+ +||||+++++++
T Consensus 5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~-------------~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~ 68 (314)
T cd08216 5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDS-------------CSKEDLKLLQQEIITSRQL-QHPNILPYVTSF 68 (314)
T ss_pred hhhHhhcCC--ceEEEEEecCCCCEEEEEEEeccc-------------cchhHHHHHHHHHHHHHhc-CCcchhhhhhee
Confidence 344444444 555666666799999999987531 1123456789999999999 599999999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
...+..+++|||+++|+|.+++.......+++..+..++.||+.||.|||+++|+||||||+||+++ .++.+||+||
T Consensus 69 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~ 145 (314)
T cd08216 69 IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGL 145 (314)
T ss_pred ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecC
Confidence 9999999999999999999988655556789999999999999999999999999999999999998 4789999999
Q ss_pred ccccccCCCC--------CccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 259 GLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 259 G~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|.+....... ......++..|+|||++.. .++.++||||+||++|+|++|+.||..............+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~ 225 (314)
T cd08216 146 RYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRG 225 (314)
T ss_pred ccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 9886543211 1233467889999999865 3678999999999999999999999776544333222221
Q ss_pred CCCCC-------C-----------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFR-------R-----------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~-------~-----------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..... . .....++.++.+|+.+||..||++|||+.++|+||||+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 226 TVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 11000 0 00012345788999999999999999999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=324.01 Aligned_cols=257 Identities=29% Similarity=0.517 Sum_probs=207.8
Q ss_pred ceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+|++.+.||.|+||.||++.+. .++..||||.+.+.... ........+..|+.++.++.+||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~-----------~~~~~~~~~~~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV-----------QKAKTAEHTRTERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHH-----------hhhhHHHHHHHHHHHHHhccCCcchhh
Confidence 3788999999999999999864 46789999998754211 011234567899999999977999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++.+..+..+|+||||+++|+|.+.+.. ...+++..+..++.|++.||.|||+.+++||||+|+||+++ .++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~ 144 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHV 144 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCE
Confidence 99999999999999999999999988743 35689999999999999999999999999999999999998 46789
Q ss_pred EEEeeccccccCCCCC--ccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCCh----hHHHHHH
Q 008197 254 KATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV 324 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~----~~~~~~i 324 (574)
+|+|||++........ .....|+..|+|||.+.+. .+.++||||||+++|+|++|..||..... ......+
T Consensus 145 ~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 224 (288)
T cd05583 145 VLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI 224 (288)
T ss_pred EEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH
Confidence 9999999876543322 2235689999999988653 47889999999999999999999954322 2233333
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC---HHHHhcCcccccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG 373 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~~~l~hp~~~~~ 373 (574)
...... ....++..+.++|.+||+.+|++||| +.++|+||||+..
T Consensus 225 ~~~~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 225 LKSKPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred HccCCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence 333222 22357889999999999999999998 5678999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=317.18 Aligned_cols=247 Identities=24% Similarity=0.320 Sum_probs=205.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||.|+||.||+|.+. ++..||||.+.... ...+.+.+|+.+++++ +||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~~ 67 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT----------------MDPKDFLAEAQIMKKL-RHPKLIQLY 67 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc----------------ccHHHHHHHHHHHHHC-CCCCcccee
Confidence 57999999999999999999864 45789999986541 1235678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+..|+||||+++++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++ .++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l 144 (261)
T cd05068 68 AVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKV 144 (261)
T ss_pred EEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEE
Confidence 9999999999999999999999988655445789999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++......... ....++..|+|||++.+ .++.++||||||+++|+|++ |+.||.+.........+.....
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-- 222 (261)
T cd05068 145 ADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-- 222 (261)
T ss_pred CCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--
Confidence 999999876532211 11223457999998765 45889999999999999999 9999988777777766654422
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.......+..+.+++.+||+.+|.+||++.+++.
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 223 -MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 1122457889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=315.50 Aligned_cols=245 Identities=33% Similarity=0.610 Sum_probs=208.9
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||.|+||.||++.+..+++.||+|.+.+... ........+..|+.+++.+ +||||+++++.+..++.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 67 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI------------IKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEK 67 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh------------cchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCe
Confidence 6999999999999988899999999876521 1112456788999999999 59999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
.|+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++ .++.++|+|||++..
T Consensus 68 ~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~ 142 (250)
T cd05123 68 LYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKE 142 (250)
T ss_pred eEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCccee
Confidence 9999999999999998843 34689999999999999999999999999999999999998 477899999999977
Q ss_pred cCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCH
Q 008197 264 IKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341 (574)
Q Consensus 264 ~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 341 (574)
.... .......++..|+|||.+.+. .+.++|+||||+++|+|++|..||...........+......++ ..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~ 218 (250)
T cd05123 143 LSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSP 218 (250)
T ss_pred cccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCH
Confidence 6443 233456789999999988654 47789999999999999999999987776666666665433222 34588
Q ss_pred HHHHHHHHccccCCCCCCCH---HHHhcCccc
Q 008197 342 SAKDFVKKLLVKDPRARLTA---AQALSHPWV 370 (574)
Q Consensus 342 ~~~~li~~~L~~dp~~Rps~---~~~l~hp~~ 370 (574)
.+.++|.+||..||++||++ .++++||||
T Consensus 219 ~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 219 EARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 99999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=322.30 Aligned_cols=249 Identities=18% Similarity=0.257 Sum_probs=206.0
Q ss_pred ceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.|++.+.||+|+||.||+|.+.. .+..||||++.... .....+.+..|+.++..+ +||||
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~~~~l-~h~~i 70 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--------------EGPLREEFKHEAMMRSRL-QHPNI 70 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--------------CHHHHHHHHHHHHHHhcC-CCCCc
Confidence 58899999999999999998754 35789999986531 112345688999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDl 237 (574)
+++++++......++++||+++++|.+++... ....+++..+..++.|++.||.|||++||+||||
T Consensus 71 v~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dl 150 (283)
T cd05091 71 VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDL 150 (283)
T ss_pred CeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 99999999999999999999999999887432 1235888999999999999999999999999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCC
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPF 312 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf 312 (574)
||+|||++ +++.+||+|||+++....... .....+++.|+|||.+. +.++.++|||||||++|||++ |..||
T Consensus 151 kp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~ 227 (283)
T cd05091 151 ATRNVLVF---DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 227 (283)
T ss_pred chhheEec---CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence 99999998 467899999999876533221 22345678999999875 456889999999999999998 88999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+....+....+........ ....+..+.+|+.+||+.+|.+||++.+++.
T Consensus 228 ~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 228 CGYSNQDVIEMIRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred CCCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 88877777777766543221 2457889999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=318.85 Aligned_cols=250 Identities=20% Similarity=0.302 Sum_probs=202.5
Q ss_pred eeecccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
|.+++.||+|+||.||+|.+..+ +..||||.+..... .......+.+|+.+++.+ +||||+++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~iv~~ 66 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-------------TYSEIEEFLSEAACMKDF-DHPNVMKL 66 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-------------CHHHHHHHHHHHHHHHhC-CCCCeeeE
Confidence 56889999999999999987653 47899999865311 122345788999999999 59999999
Q ss_pred EEEEEcCCE------EEEEEeccCCCchHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 175 YNAFEDDNY------VYIAMELCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 175 ~~~~~~~~~------~~lv~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
++++..... .++|+||+++|+|...+.... ...+++..+..++.|++.||.|||+.+|+||||||+||++
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~ 146 (273)
T cd05035 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML 146 (273)
T ss_pred EeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE
Confidence 998865443 899999999999988875432 2468999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 319 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~ 319 (574)
+ +++.+||+|||+++........ ....++..|+|||.+.+ .++.++|||||||++|||++ |..||.+....+
T Consensus 147 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~ 223 (273)
T cd05035 147 R---EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE 223 (273)
T ss_pred C---CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 8 4789999999999865433221 12345678999998864 45889999999999999999 999998877777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.+..+..+... . ....+++.+.+++.+||..||.+|||+.+++.+
T Consensus 224 ~~~~~~~~~~~-~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 224 IYDYLRHGNRL-K--QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHHcCCCC-C--CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77666554321 1 124578899999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=316.51 Aligned_cols=247 Identities=23% Similarity=0.347 Sum_probs=205.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.|++.++||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.+++++ +||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS----------------MSPEAFLAEANLMKQL-QHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC----------------CcHHHHHHHHHHHHhc-CCcCeeeE
Confidence 457999999999999999999854 57889999887542 1235688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++. .+.+++||||+++++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++ .++.++
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~ 142 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCK 142 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEE
Confidence 99875 45689999999999999988666666799999999999999999999999999999999999998 478899
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++........ .....++..|+|||++.. .++.++||||||+++|+|++ |++||.+.+..+....+.....
T Consensus 143 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~- 221 (260)
T cd05067 143 IADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR- 221 (260)
T ss_pred EccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC-
Confidence 999999976542221 123356678999998864 45889999999999999999 9999988777666666544321
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.....+.++.++|.+||..+|++|||+++++.
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 222 --MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 1223457789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=319.52 Aligned_cols=256 Identities=27% Similarity=0.457 Sum_probs=208.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|.+.+.||.|+||.||++.+..++..+++|+++.... ..........+..|+.+++.+ +||||+++++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~ 69 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPV----------GELNPNETVQANQEAQLLSKL-DHPAIVKFHA 69 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccc----------cccCcchHHHHHHHHHHHHhC-CCCcHHHHHH
Confidence 58899999999999999999988877787877654311 001112234567899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.+....++|+||+++++|.+.+.. .....+++..+..++.|++.||.|||+.|++|+||+|+||+++ ++.+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~ 145 (260)
T cd08222 70 SFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLK 145 (260)
T ss_pred HHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEe
Confidence 99999999999999999999887753 2345799999999999999999999999999999999999997 35699
Q ss_pred EEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++....... ......|++.|+|||.+.+ .++.++|+||||+++|+|++|..||...........+..+....
T Consensus 146 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 224 (260)
T cd08222 146 IGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS- 224 (260)
T ss_pred ecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC-
Confidence 99999987654332 2334578999999998764 35778999999999999999999998776666666655433221
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....++.++.++|.+||..+|++||++.++++||||
T Consensus 225 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 225 --LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred --CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 113567899999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=327.58 Aligned_cols=260 Identities=33% Similarity=0.520 Sum_probs=208.0
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||.|+||.||+|.+..+|..||||++.+.. ......+.+..|+.+++.+ +||||+
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hpniv 72 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-------------STPVLAKRTYRELKLLKHL-RHENII 72 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-------------cccchhHHHHHHHHHHHhc-CCCCee
Confidence 46678999999999999999999999999999999886531 0112345678899999999 599999
Q ss_pred eEEEEEEc-CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 173 KFYNAFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 173 ~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++|.. ....|+|+||+ +++|.+.+. ..++++..+..++.||+.||.|||+.+|+||||+|+||+++ .++
T Consensus 73 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~ 145 (328)
T cd07856 73 SLSDIFISPLEDIYFVTELL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENC 145 (328)
T ss_pred eEeeeEecCCCcEEEEeehh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCC
Confidence 99999875 56789999998 568877662 34688999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC--
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-- 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~-- 327 (574)
.+||+|||++..... ......+++.|+|||++.+ .++.++|||||||++|+|++|++||...........+...
T Consensus 146 ~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~ 223 (328)
T cd07856 146 DLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLG 223 (328)
T ss_pred CEEeCccccccccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 999999999876432 2234578899999998754 4688999999999999999999999766543222111110
Q ss_pred ---------------------CC---CCC-CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 328 ---------------------KP---DFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 328 ---------------------~~---~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.. ..+ ....+.+++.+.++|.+||+.+|++|||+.+++.||||.....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~ 296 (328)
T cd07856 224 TPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD 296 (328)
T ss_pred CCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence 00 000 0112457789999999999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=319.47 Aligned_cols=247 Identities=28% Similarity=0.436 Sum_probs=200.3
Q ss_pred eecccccccCCeEEEEEEEc----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 99 TIGKLLGHGQFGYTYVATDK----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.+.||.|+||.||+|... ..+..|+||.+.... .....+.+.+|+++++++ +||||+++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~ni~~~ 66 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS--------------SEEEEEEFLNEIQILRKL-RHPNIVKL 66 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS--------------SHHHHHHHHHHHHHHHTH-SBTTBE-E
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc--------------ccccceeeeecccccccc-cccccccc
Confidence 46788999999999999987 346789999985421 123467889999999999 69999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++...+.+++|+|||++|+|.+++.......+++..+..++.||+.||.|||+++|+|++|+|+|||++ .++.+|
T Consensus 67 ~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~K 143 (259)
T PF07714_consen 67 YGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVK 143 (259)
T ss_dssp EEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccc
Confidence 99999888899999999999999999776567899999999999999999999999999999999999999 478999
Q ss_pred EEeeccccccCCCCC---ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
|+|||++........ .....+...|+|||++... ++.++||||||+++|||++ |+.||.......+...+..+..
T Consensus 144 l~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~ 223 (259)
T PF07714_consen 144 LSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR 223 (259)
T ss_dssp EESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999987632221 1234577789999998655 5889999999999999999 7899988887777777755433
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. . ....++..+.++|..||..+|.+|||+.++++
T Consensus 224 ~-~--~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 L-P--IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp T-T--SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred c-e--eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 2 1 22457899999999999999999999999874
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=318.22 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=200.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCC--EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
|.+++.||+|+||.||+|.+..++. .||+|.+.... ......+.+.+|+.+++.+ +||||++++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 66 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-------------CTRSEMEDFLSEAVCMKEF-DHPNVMRLI 66 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-------------CCHHHHHHHHHHHHHHHhC-CCCCcceEE
Confidence 3567899999999999999877765 68999876531 1123456788999999999 599999999
Q ss_pred EEEEc------CCEEEEEEeccCCCchHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 176 NAFED------DNYVYIAMELCEGGELLDRILAK----KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 176 ~~~~~------~~~~~lv~e~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
+++.. ....++||||+++|+|.+++... ....+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 67 ~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 146 (272)
T cd05075 67 GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN 146 (272)
T ss_pred EEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc
Confidence 98743 23578999999999998877432 224589999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 320 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~ 320 (574)
.++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |+.||.+......
T Consensus 147 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 223 (272)
T cd05075 147 ---ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI 223 (272)
T ss_pred ---CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 478999999999987643321 122346778999998865 46889999999999999999 8999988777666
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...+..+... ...+.++..+.++|.+||..+|.+|||+.++++
T Consensus 224 ~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 224 YDYLRQGNRL---KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6666554321 122467889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=315.93 Aligned_cols=246 Identities=23% Similarity=0.361 Sum_probs=203.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||+|+||.||+|.++ ++..+|+|.+.... .....+.+|+.+++.+ +||||+++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~----------------~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA----------------MSEDDFIEEAKVMMKL-SHPNLVQLYG 66 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC----------------CCHHHHHHHHHHHHhC-CCCCEEEEEE
Confidence 5889999999999999999875 46689999886531 1234677899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+..|+||||++|++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++ .++.+||+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~ 142 (256)
T cd05059 67 VCTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVS 142 (256)
T ss_pred EEcCCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEEC
Confidence 9999999999999999999999885433 4789999999999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCCCc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 257 DFGLSDFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 257 DFG~a~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|||+++........ ....++..|+|||++.+ .++.++|||||||++|+|++ |+.||...+..+....+.....
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--- 219 (256)
T cd05059 143 DFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR--- 219 (256)
T ss_pred CcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc---
Confidence 99999765432211 12233457999998864 56889999999999999999 8999987777666666654322
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.......+..+.+++.+||..+|++|||+.++++.
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 11224578999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=324.75 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=203.8
Q ss_pred cceeecccccccCCeEEEEEEEcC-------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
++|.+++.||+|+||.||+|.+.. ++..+|+|.+.... .......+..|+.+++.+.+|
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~e~~~l~~l~~h 83 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--------------TEKDLSDLISEMEMMKMIGKH 83 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--------------ChHHHHHHHHHHHHHHHhcCC
Confidence 579999999999999999998643 23579999887531 112345688899999999669
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
|||+++++++...+.+|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++|++|
T Consensus 84 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H 163 (307)
T cd05098 84 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIH 163 (307)
T ss_pred CCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999999999999999986532 135889999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.
T Consensus 164 ~dlkp~Nill~---~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~ 240 (307)
T cd05098 164 RDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 240 (307)
T ss_pred ccccHHheEEc---CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCC
Confidence 99999999998 478999999999876543221 112234578999998765 46889999999999999998 89
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.||.+....+....+..... ......++.++.+|+.+||..+|.+|||+.+++.
T Consensus 241 ~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 241 SPYPGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCCCcCCHHHHHHHHHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99977766665555544321 1222457889999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=331.05 Aligned_cols=253 Identities=25% Similarity=0.340 Sum_probs=200.1
Q ss_pred cceeecccccccCCeEEEEEEE-----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++.+.||+|+||.||+|.+ ..+++.||||.++.... ......+.+|+.++.++.+|||
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~E~~~l~~l~~h~n 72 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--------------HSEHRALMSELKILIHIGHHLN 72 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--------------hHHHHHHHHHHHHHHhccCCcc
Confidence 5799999999999999999984 34678999999865311 1234568899999999977999
Q ss_pred cceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhc---------------------------------------------
Q 008197 171 VVKFYNAFED-DNYVYIAMELCEGGELLDRILAKK--------------------------------------------- 204 (574)
Q Consensus 171 iv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~--------------------------------------------- 204 (574)
|+++++++.. +..+++|||||++|+|.+++....
T Consensus 73 iv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (343)
T cd05103 73 VVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGF 152 (343)
T ss_pred HhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccc
Confidence 9999998865 557899999999999999885421
Q ss_pred --------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecccccc
Q 008197 205 --------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264 (574)
Q Consensus 205 --------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~ 264 (574)
...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 153 VEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDI 229 (343)
T ss_pred cCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEeccccccc
Confidence 12467888899999999999999999999999999999998 4789999999999765
Q ss_pred CCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 265 KPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 265 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
..... .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||............+........+ ...
T Consensus 230 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 307 (343)
T cd05103 230 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP--DYT 307 (343)
T ss_pred ccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC--CCC
Confidence 32221 122345678999998754 46889999999999999997 999997765443333333332222222 236
Q ss_pred CHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 340 SNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
++++.+++.+||..+|.+|||+.++++|
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 7889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=316.11 Aligned_cols=246 Identities=25% Similarity=0.350 Sum_probs=202.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+. .+..||+|.+.... ...+.+.+|+.+++.+ +||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~----------------~~~~~~~~E~~~l~~l-~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGT----------------MSPESFLEEAQIMKKL-RHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCC----------------CCHHHHHHHHHHHHhc-CCCceEEE
Confidence 357999999999999999999865 56679999987541 1234688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++. ....|+||||+++++|.+++.......+++..+..++.|++.||.|||+++|+||||||+||+++ +++.++
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~ 142 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCK 142 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEE
Confidence 99885 45689999999999999988655556689999999999999999999999999999999999998 478899
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++........ .....++..|+|||++.+ .++.++||||||+++|+|++ |.+||.+....+....+.....
T Consensus 143 l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~- 221 (260)
T cd05070 143 IADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR- 221 (260)
T ss_pred eCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-
Confidence 999999976543221 122345668999998764 46889999999999999999 9999988777666666654321
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHh
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l 365 (574)
.+.....+..+.+|+.+||..+|++|||+.+++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 222 --MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred --CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 122245788999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=323.74 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=204.2
Q ss_pred cceeecccccccCCeEEEEEEEcC-------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
++|.+.+.||+|+||.||+|.+.. ....||+|.+.... .......+.+|+.+++.+.+|
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h 77 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--------------TDKDLADLISEMELMKLIGKH 77 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--------------ChHHHHHHHHHHHHHHhccCC
Confidence 579999999999999999997632 34579999876531 112345688999999999669
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
|||+++++++...+.+|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+|
T Consensus 78 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H 157 (314)
T cd05099 78 KNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIH 157 (314)
T ss_pred CCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 999999999999999999999999999999885432 245889999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|+|++ |.
T Consensus 158 ~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~ 234 (314)
T cd05099 158 RDLAARNVLVT---EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGG 234 (314)
T ss_pred ccccceeEEEc---CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCC
Confidence 99999999998 478899999999976543221 112234567999998765 45889999999999999999 89
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.||.+....+.+..+..... ......++.++.+++.+||..+|.+|||+.++++
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 235 SPYPGIPVEELFKLLREGHR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99988777666666654321 1122457789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=314.67 Aligned_cols=241 Identities=24% Similarity=0.306 Sum_probs=196.3
Q ss_pred cccccCCeEEEEEEE--cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc
Q 008197 103 LLGHGQFGYTYVATD--KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~ 180 (574)
.||+|+||.||+|.+ ..++..||+|++.... ......+.+..|+.+++.+ +||||+++++++..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~ 67 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-------------NDPALKDELLREANVMQQL-DNPYIVRMIGICEA 67 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-------------CcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC
Confidence 589999999999964 4567899999886431 1123456788999999999 59999999998864
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
...++||||+++|+|.+++. ....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 68 -~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~ 141 (257)
T cd05116 68 -ESWMLVMELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGL 141 (257)
T ss_pred -CCcEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCcc
Confidence 46789999999999998874 335789999999999999999999999999999999999998 477899999999
Q ss_pred ccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 261 SDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 261 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+........ .....++..|+|||.+.. .++.++|||||||++|||++ |..||.+.........+..+.. . .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~--~ 218 (257)
T cd05116 142 SKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M--E 218 (257)
T ss_pred ccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C--C
Confidence 976543322 122344678999998864 45789999999999999998 9999988777666666654432 1 1
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+.+++++.+||.+||+.||++||++.+|..
T Consensus 219 ~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 219 CPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 22458899999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=333.72 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=208.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCC---E-EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGD---R-VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~---~-vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+-.+.++||+|+||.||+|..+..+. . ||||..... .........++.+|.++|+.+ +|||||
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~------------~~~~~~~~~e~m~EArvMr~l-~H~NVV 224 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS------------SELTKEQIKEFMKEARVMRQL-NHPNVV 224 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc------------ccccHHHHHHHHHHHHHHHhC-CCCCEE
Confidence 45567899999999999998766432 3 899988752 112345678899999999999 699999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++||+......++||||+|.||+|.++|.... ..++..+...++.+.+.||+|||++++|||||-..|+|++ .+..
T Consensus 225 r~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~ 300 (474)
T KOG0194|consen 225 RFYGVAVLEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGV 300 (474)
T ss_pred EEEEEEcCCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCe
Confidence 99999999999999999999999999995443 3699999999999999999999999999999999999998 3567
Q ss_pred eEEEeeccccccCCCCCcc-ccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQ-DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~-~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
+||+|||+|+......... ...-...|+|||.+. +-++.++|||||||++||+++ |..||.+....++...|.....
T Consensus 301 vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~ 380 (474)
T KOG0194|consen 301 VKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGY 380 (474)
T ss_pred EEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCc
Confidence 8999999997653211111 112446899999886 456899999999999999999 8999999999999999966543
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+.+ +..|.++..++.+|+..+|++|||+.++.+
T Consensus 381 r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 381 RMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred cCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 33322 356788999999999999999999998854
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=314.37 Aligned_cols=245 Identities=26% Similarity=0.389 Sum_probs=207.2
Q ss_pred ccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.||+|+||.||+|.+... +..||+|.+..... ....+.+.+|+.+++.+. ||||+++++++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--------------~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~ 65 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--------------EEERKDFLKEARVMKKLG-HPNVVRLLGVC 65 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--------------hhHHHHHHHHHHHHhhcC-CCChheeeeee
Confidence 4699999999999998765 88999999876421 113567889999999995 99999999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKK-------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
.....+++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++
T Consensus 66 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~ 142 (262)
T cd00192 66 TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDL 142 (262)
T ss_pred cCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCC
Confidence 99999999999999999999885431 36799999999999999999999999999999999999998 468
Q ss_pred CeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||.+....... ......+++.|+|||.+.. .++.++|||||||++|+|++ |..||...........+..
T Consensus 143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~ 222 (262)
T cd00192 143 VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK 222 (262)
T ss_pred cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999998765432 2334568889999998865 56889999999999999999 6999988877777777765
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+.. ......+|+++.+++.+||..+|.+|||+.+++++
T Consensus 223 ~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 223 GYR---LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CCC---CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 322 11224568999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=314.21 Aligned_cols=253 Identities=27% Similarity=0.448 Sum_probs=213.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|++.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.+. ||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l~-~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-------------SQKEREDAVNEIRILASVN-HPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-------------cHHHHHHHHHHHHHHHhCC-CCCchhhhh
Confidence 48899999999999999999999999999999875421 1223456778999999995 999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++......|+|+||+++++|.+++.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~---~~~~k 143 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA---NDLVK 143 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec---CCcEE
Confidence 9999999999999999999998875422 356899999999999999999999999999999999999984 77899
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
|+|||++...... ......|++.|+|||.+.+. ++.++|+||||+++|+|++|+.||...+.......+...... .
T Consensus 144 l~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~ 220 (256)
T cd08530 144 IGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP--P 220 (256)
T ss_pred EeeccchhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--C
Confidence 9999999776544 33345789999999988654 577899999999999999999999887776666655543322 1
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
....++.++.++|.+||..+|.+|||+.++++||++
T Consensus 221 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 221 -IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 113577899999999999999999999999999974
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-39 Score=317.27 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=197.9
Q ss_pred ccccccCCeEEEEEEEcCCCC--EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
+.||+|+||.||+|.+..++. .+|+|.+.... .....+.+.+|+.++.++.+||||+++++++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 66 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--------------SKDDHRDFAGELEVLCKLGHHPNIINLLGACE 66 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--------------CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEe
Confidence 368999999999999888775 46888776421 12234578899999999967999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
..+.+|+||||+++|+|.+++.... ...+++..+..++.|++.||.|||++|++||||||+|||++
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~ 146 (270)
T cd05047 67 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG 146 (270)
T ss_pred cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc
Confidence 9999999999999999999885432 13578999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 323 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~ 323 (574)
.++.+||+|||++..............+..|+|||++.. .++.++|||||||++|+|++ |..||.+.+.......
T Consensus 147 ---~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~ 223 (270)
T cd05047 147 ---ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 223 (270)
T ss_pred ---CCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHH
Confidence 478999999999864322111112234567999998864 45789999999999999997 9999988777666666
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+.... .......++.++.+++.+||..+|.+|||+.+++.
T Consensus 224 ~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 224 LPQGY---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred HhCCC---CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 54432 11222357789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=316.08 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=205.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+|++.+.||+|+||.||+|.++.++. .+|+|.+.... .......+.+|+.+++++ +||||+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~ 68 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--------------TEKQRRDFLSEASIMGQF-DHPNII 68 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--------------CHHHHHHHHHHHHHHHhC-CCCCcc
Confidence 478999999999999999998865543 79999886531 122346788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++..++..|+||||+++++|.+++... ...+++..+..++.|++.||.|||+.+++||||||+|||++ .++.
T Consensus 69 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~ 144 (267)
T cd05066 69 HLEGVVTKSKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLV 144 (267)
T ss_pred eEEEEEecCCccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCe
Confidence 9999999999999999999999999887543 35689999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
++|+|||++........ .....++..|+|||.+.+ .++.++|||||||++|++++ |..||......+....+..
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~ 224 (267)
T cd05066 145 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEE 224 (267)
T ss_pred EEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhC
Confidence 99999999986643221 112234568999998874 56889999999999999886 9999988777666666654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ..+....+++.+.+++.+||+.+|.+||++.++++
T Consensus 225 ~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 225 GY---RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CC---cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 42 12222457889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=333.20 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=203.6
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|.+++.||+|+||.||+|++. .++..||||++..... ....+.+.+|+.+|.++..|||
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--------------~~~~~~~~~E~~~l~~l~~H~n 102 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--------------SSEKQALMSELKIMSHLGPHLN 102 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--------------hhHHHHHHHHHHHHHhcCCCCC
Confidence 46889999999999999999864 3456899999975311 1223468899999999955999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC---------------------------------------------
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD--------------------------------------------- 205 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--------------------------------------------- 205 (574)
|+++++++...+.+++|||||++|+|.+++.....
T Consensus 103 iv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T cd05107 103 IVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS 182 (401)
T ss_pred eEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence 99999999999999999999999999998854321
Q ss_pred ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 206 ---------------------------------------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 206 ---------------------------------------------------~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
..+++..+..++.||+.||.|||+.+|+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 262 (401)
T cd05107 183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVH 262 (401)
T ss_pred CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCc
Confidence 23677788999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ ..+.+||+|||++....... ......+++.|+|||++.+ .++.++|||||||++|||++ |.
T Consensus 263 rdlkp~NiLl~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~ 339 (401)
T cd05107 263 RDLAARNVLIC---EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGG 339 (401)
T ss_pred ccCCcceEEEe---CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCC
Confidence 99999999998 47789999999997643221 1223467889999998865 45888999999999999998 89
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.||......+.....+....... ....++.++.+|+.+||..+|.+||++.+++..
T Consensus 340 ~P~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 340 TPYPELPMNEQFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCCCCCCchHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99977655555444444332221 224578999999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=322.23 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=206.3
Q ss_pred cceeecccccccCCeEEEEEEEc-------CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
.+|.+.+.||+|+||.||+|++. .++..||+|.+.... .......+.+|+.+++.+.+|
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h 80 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--------------TEKDLSDLVSEMEMMKMIGKH 80 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--------------chHHHHHHHHHHHHHHhhccC
Confidence 57999999999999999999753 234579999886431 122345788999999999669
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
|||+++++++.....+|+||||+++|+|.+++.... ...++...+..++.||+.||.|||++||+|
T Consensus 81 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH 160 (304)
T cd05101 81 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIH 160 (304)
T ss_pred CCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 999999999999999999999999999999886532 235788899999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.
T Consensus 161 ~dlkp~Nili~---~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 237 (304)
T cd05101 161 RDLAARNVLVT---ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 237 (304)
T ss_pred cccccceEEEc---CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 99999999998 478999999999986643221 223356778999998764 46889999999999999998 88
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.||.+.+..+....+...... ......+..+.+|+.+||..+|.+|||+.++++.
T Consensus 238 ~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 238 SPYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred CCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 999888777777666544321 1124578899999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=313.50 Aligned_cols=243 Identities=23% Similarity=0.347 Sum_probs=202.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|.+.+.||+|+||.||++.. .|..||+|.+... ...+.+.+|+.+++.+ +|||+++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----------------~~~~~~~~e~~~l~~l-~~~~i~~~~ 65 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----------------ATAQAFLAEASVMTQL-RHSNLVQLL 65 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----------------chHHHHHHHHHHHHhC-CCCCeeeEE
Confidence 3689999999999999999974 4788999987543 1235688999999999 599999999
Q ss_pred EEE-EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~-~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++ ..++..++||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++ .++.+|
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~k 142 (256)
T cd05082 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAK 142 (256)
T ss_pred EEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEE
Confidence 975 4567899999999999999988655555689999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++....... ....++..|+|||++.+. ++.++|||||||++|+|++ |+.||...........+..+..
T Consensus 143 l~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--- 217 (256)
T cd05082 143 VSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK--- 217 (256)
T ss_pred ecCCccceeccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---
Confidence 99999987543322 233456789999988654 5788999999999999997 9999987776666666654422
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
....+.+++.+.+++.+||..+|.+|||+.++++
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2223467899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=314.36 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=207.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|.+.+.||.|+||.||+|.+. .++.||||.+.... ...+.+.+|+.+++.+ +||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT----------------MSPEAFLQEAQIMKKL-RHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc----------------cCHHHHHHHHHHHhhC-CCCCEeee
Confidence 357999999999999999999875 55789999987541 1345688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++......++||||+++++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++ .++.+|
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~ 143 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCK 143 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEE
Confidence 99999989999999999999999988665556799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++........ .....++..|+|||.+.+ ..+.++|||||||++|+|++ |+.||.+.........+.....
T Consensus 144 l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~- 222 (261)
T cd05034 144 IADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR- 222 (261)
T ss_pred ECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-
Confidence 999999876543211 112234568999998875 45889999999999999998 9999988777777777655422
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.......+..+.+++.+||..+|.+||++.++++
T Consensus 223 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 223 --MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 1122356889999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=318.07 Aligned_cols=249 Identities=21% Similarity=0.339 Sum_probs=204.7
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+|.+.+.||+|+||.||+|... .++..+|+|.+.... ......+.+|+++++.+ +|||
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~ 68 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---------------ESARQDFQREAELLTVL-QHQH 68 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---------------HHHHHHHHHHHHHHhcC-CCCC
Confidence 46888999999999999999743 356789999876531 23345789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDl 237 (574)
|+++++++...+..++||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||
T Consensus 69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dl 148 (280)
T cd05092 69 IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDL 148 (280)
T ss_pred CceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccc
Confidence 99999999999999999999999999998854321 35889999999999999999999999999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCC
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPF 312 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf 312 (574)
||+|||++ +++.+||+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |.+||
T Consensus 149 kp~nil~~---~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 225 (280)
T cd05092 149 ATRNCLVG---QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPW 225 (280)
T ss_pred cHhhEEEc---CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 99999998 478999999999875533221 123345788999998764 45889999999999999998 99999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...........+..+... .....+++.+.+||.+||+.||.+||++.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 226 YQLSNTEAIECITQGREL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred ccCCHHHHHHHHHcCccC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 877776666666554322 112357899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-39 Score=314.16 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=202.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||.|+||.||+|.+..+ ..+|+|.+.... ...+.+.+|+.+++.+ +|||+++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~~~ 67 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT----------------MMPEAFLQEAQIMKKL-RHDKLVPLY 67 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC----------------ccHHHHHHHHHHHHhC-CCCCeeeEE
Confidence 5799999999999999999987654 469999876531 1235678899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.. +..++||||+++++|.+++.......+++..+..++.||+.||.|||+.||+||||||+||+++ +++.++|
T Consensus 68 ~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l 143 (260)
T cd05069 68 AVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKI 143 (260)
T ss_pred EEEcC-CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEE
Confidence 98854 5689999999999999988655555689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++........ .....++..|+|||.+.+ ..+.++|||||||++|+|++ |..||.+....+....+.....
T Consensus 144 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-- 221 (260)
T cd05069 144 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-- 221 (260)
T ss_pred CCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--
Confidence 99999976543221 123356778999998764 46889999999999999999 9999988777776666654321
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......++..+.+++.+||..+|.+||++.++++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 222 -MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred -CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1223467889999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=319.58 Aligned_cols=249 Identities=23% Similarity=0.349 Sum_probs=204.6
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+|.+.+.||+|+||.||+|.+. .++..+|+|.+.... ......+.+|+.+++.+ +|||
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~ 68 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---------------LAARKDFQREAELLTNL-QHEH 68 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---------------HHHHHHHHHHHHHHhcC-CCCC
Confidence 46899999999999999999854 345678999876431 12335688999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrD 236 (574)
|+++++++...+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+|||
T Consensus 69 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 148 (291)
T cd05094 69 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRD 148 (291)
T ss_pred cceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 9999999999999999999999999999885432 23489999999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCC
Q 008197 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRP 311 (574)
Q Consensus 237 lkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~P 311 (574)
|||+|||++ .++.++|+|||++........ .....+++.|+|||++.+ .++.++|||||||++|+|++ |..|
T Consensus 149 lkp~Nil~~---~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 225 (291)
T cd05094 149 LATRNCLVG---ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 225 (291)
T ss_pred cCcceEEEc---cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999998 478999999999976543221 223467889999998764 45889999999999999998 9999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
|......+....+..+.... .....|..+.+++.+||..+|.+|||+.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 226 WFQLSNTEVIECITQGRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CCCCCHHHHHHHHhCCCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 98877776666655443221 12346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=296.20 Aligned_cols=253 Identities=28% Similarity=0.546 Sum_probs=211.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++.+++|+|.|+.|+.|.+..+++.++||++++- ....+.+|+.||+.|.+||||++++
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------------------kkkKIkREikIL~nL~gg~NIi~L~ 99 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------------------KKKKIKREIKILQNLRGGPNIIKLL 99 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------------------HHHHHHHHHHHHHhccCCCCeeehh
Confidence 5799999999999999999999899999999998754 3467899999999999999999999
Q ss_pred EEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++..++ ....||+||+.+.+..... ..++.-.++.++.+++.||.|||+.||+|||+||.|++|+. +.-.+
T Consensus 100 DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh--~~rkL 172 (338)
T KOG0668|consen 100 DIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH--ELRKL 172 (338)
T ss_pred hhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech--hhcee
Confidence 999864 4688999999887654433 56888999999999999999999999999999999999996 56789
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhh--cCCCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHh----
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLR---- 326 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~---- 326 (574)
+|+|+|+|.+..++..++..+.+..|--||++- ..|...-|+|||||+|..|+..+.||... +..+.+.+|.+
T Consensus 173 rlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt 252 (338)
T KOG0668|consen 173 RLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGT 252 (338)
T ss_pred eeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhCh
Confidence 999999999999999888889999999999874 45678899999999999999999998654 33222222211
Q ss_pred -------------CCC-------CCCCCCCC---------CCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 -------------NKP-------DFRRKPWP---------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 -------------~~~-------~~~~~~~~---------~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
-.+ .....+|. -.++++.+|+.++|..|.++|+||.+++.||||...
T Consensus 253 ~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 253 DELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred HHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 001 11122232 246899999999999999999999999999999864
|
|
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=316.74 Aligned_cols=248 Identities=23% Similarity=0.304 Sum_probs=201.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC----EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.+ +||||
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--------------~~~~~~~~~~e~~~l~~~-~~~~i 71 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--------------SPKANKEILDEAYVMAGV-GSPYV 71 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--------------CHHHHHHHHHHHHHHHhc-CCCCC
Confidence 478999999999999999999877776 48999886531 122345788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++... ..++++||+++|+|.+.+... ...+++..+..++.||+.||.|||+++|+||||||+|||++ +++
T Consensus 72 ~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~ 146 (279)
T cd05109 72 CRLLGICLTS-TVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPN 146 (279)
T ss_pred ceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCC
Confidence 9999998764 478999999999999887543 35789999999999999999999999999999999999997 467
Q ss_pred CeEEEeeccccccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||+++........ ....+++.|+|||.+.+ .++.++|||||||++|||++ |..||...........+..
T Consensus 147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05109 147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK 226 (279)
T ss_pred cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence 8999999999876433221 12345678999998754 46889999999999999998 9999977665555544443
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+. .. +..+..+.++.+++.+||..||++||++.+++.
T Consensus 227 ~~-~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 227 GE-RL--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CC-cC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 32 21 223467889999999999999999999999984
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=308.08 Aligned_cols=262 Identities=24% Similarity=0.314 Sum_probs=215.9
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
.+-+..||.|+||.|++..++.+|+..|||.++... ......++..|.+...+-.+.||||++|+.
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--------------~~keq~rll~e~d~~mks~~cp~IVkfyGa 131 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--------------IEKEQKRLLMEHDTVMKSSNCPNIVKFYGA 131 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--------------chHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence 445678999999999999999999999999998752 134567889999988777789999999999
Q ss_pred EEcCCEEEEEEeccCCCch---HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCe
Q 008197 178 FEDDNYVYIAMELCEGGEL---LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L---~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
.-.++..||.||+|. -+| +.++...+...+++..+..|..-.+.||.||-. ..|||||+||+|||++ ..|.|
T Consensus 132 ~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---r~G~v 207 (361)
T KOG1006|consen 132 LFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---RHGDV 207 (361)
T ss_pred hhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe---cCCCE
Confidence 988999999999994 343 233344456789999999999999999999986 4899999999999999 58999
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCC-hhHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~-~~~~~~~i~~~~~ 329 (574)
||||||.+..+..+-..+.-+|-..|||||.+.. .|.-++||||||++|||+.||+.||...+ ..+.+..+..+.+
T Consensus 208 KLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 208 KLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred eeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 9999999987765555556689999999998853 36789999999999999999999997654 3445556666665
Q ss_pred CCCCCCC--CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 330 DFRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 330 ~~~~~~~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
+...... -.++..+..||..||.+|...||...+++.+||++-.....
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~ 337 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG 337 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence 4332221 24788999999999999999999999999999999765433
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=317.13 Aligned_cols=248 Identities=25% Similarity=0.348 Sum_probs=194.0
Q ss_pred cce-eecccccccCCeEEEEEE----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRY-TIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y-~~~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++| ++.+.||+|+||+||++. ...++..||+|.+.... .......+.+|+.+++.+ +|||
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ 67 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--------------GQQNTSGWKKEINILKTL-YHEN 67 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--------------ChHHHHHHHHHHHHHHhC-CCCC
Confidence 455 999999999999998865 33567899999986531 112345678999999999 5999
Q ss_pred cceEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 171 VVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 171 iv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
|+++++++.. ...+++||||+++++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++
T Consensus 68 i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~--- 141 (283)
T cd05080 68 IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD--- 141 (283)
T ss_pred EeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---
Confidence 9999998865 4468999999999999988743 3589999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh--H--
Q 008197 249 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--G-- 319 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~--~-- 319 (574)
.++.+||+|||++........ .....++..|+|||++.+ ..+.++|||||||++|+|++|..||...... .
T Consensus 142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~ 221 (283)
T cd05080 142 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMI 221 (283)
T ss_pred CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhh
Confidence 468899999999986643322 122346677999998764 4688999999999999999999998543211 0
Q ss_pred ----------HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 ----------IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
............ +.....+.++.+++.+||..+|++|||+++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 222 GPKQGQMTVVRLIELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred cccccccchhhhhhhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 011111111111 112356789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=318.28 Aligned_cols=249 Identities=25% Similarity=0.324 Sum_probs=201.3
Q ss_pred ceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++.+ +||||
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~i 65 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--------------SSSELRDLLSEFNLLKQV-NHPHV 65 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--------------CHHHHHHHHHHHHHHhhC-CCCCE
Confidence 37888999999999999998743 23578888876531 112346788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHH
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHL 229 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~l~~LH~ 229 (574)
+++++.+...+..++|+||+.+|+|.+++.... ...+++..+..++.|++.||.|||+
T Consensus 66 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~ 145 (290)
T cd05045 66 IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE 145 (290)
T ss_pred eeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998874321 1357899999999999999999999
Q ss_pred CCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHH
Q 008197 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 305 (574)
Q Consensus 230 ~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~el 305 (574)
++|+||||||+|||++ +++.+||+|||++........ .....++..|+|||.+.+ .++.++||||||+++|+|
T Consensus 146 ~~ivH~dikp~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el 222 (290)
T cd05045 146 MKLVHRDLAARNVLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 222 (290)
T ss_pred CCeehhhhhhheEEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHH
Confidence 9999999999999998 478999999999976533221 123356778999998754 458899999999999999
Q ss_pred Hh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 306 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 306 lt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
++ |..||.+.....+...+.... . ......++.++.+|+.+||..+|.+||++.++++
T Consensus 223 ~t~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 223 VTLGGNPYPGIAPERLFNLLKTGY-R--MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HhcCCCCCCCCCHHHHHHHHhCCC-C--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 98 999998777666665544332 1 1222457889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=314.36 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=204.6
Q ss_pred ceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
.|++.+.||+|+||.||+|.++.++. .||||.+.... .......+..|+.+++.+ +||||++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~ni~~ 69 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--------------TEKQRRDFLSEASIMGQF-DHPNIIH 69 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--------------CHHHHHHHHHHHHHHHhC-CCcCcce
Confidence 58999999999999999999877665 69999886531 123456789999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++..+..+++||||+++++|.+++... .+.+++..+..++.|++.||.|||++|++||||||+||+++ .++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~ 145 (269)
T cd05065 70 LEGVVTKSRPVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVC 145 (269)
T ss_pred EEEEECCCCceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcE
Confidence 999999999999999999999998877433 45689999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCCCc---cccc---cCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008197 254 KATDFGLSDFIKPGKKF---QDIV---GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~---~~~~---gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~ 325 (574)
||+|||++......... .... ++..|+|||.+.+ .++.++|||||||++|||++ |..||+..........+.
T Consensus 146 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~ 225 (269)
T cd05065 146 KVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE 225 (269)
T ss_pred EECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 99999998765432211 1111 2457999998864 45889999999999999886 999998887777766664
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ...+..+.++..+.+++.+||..+|.+||++.+++.
T Consensus 226 ~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 226 QD---YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred cC---CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 33 222233567889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=319.16 Aligned_cols=253 Identities=20% Similarity=0.266 Sum_probs=200.7
Q ss_pred cceeecccccccCCeEEEEEEEcCC--------------CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHH
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN--------------GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~--------------~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i 161 (574)
++|++.+.||+|+||.||+|++..+ ...||||.+.... .......+.+|+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~ei~~ 70 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--------------TKTARNDFLKEIKI 70 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--------------CHHHHHHHHHHHHH
Confidence 5799999999999999999987543 2358999886531 12234578899999
Q ss_pred HHHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 008197 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK----------DSRYTEKDAAVVVRQMLRVAAECHLHG 231 (574)
Q Consensus 162 l~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------~~~l~~~~~~~i~~qi~~~l~~LH~~~ 231 (574)
++++ +||||+++++++...+..++||||+++++|.+++.... ...+++..+..++.|++.||.|||++|
T Consensus 71 l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 149 (295)
T cd05097 71 MSRL-KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN 149 (295)
T ss_pred HHhC-CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999 59999999999999999999999999999999874321 124688899999999999999999999
Q ss_pred CEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh
Q 008197 232 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC 307 (574)
Q Consensus 232 iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt 307 (574)
++||||||+||+++ .++.+||+|||++........ .....+++.|+|||++. +.++.++|||||||++|+|++
T Consensus 150 i~H~dlkp~Nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 150 FVHRDLATRNCLVG---NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred eeccccChhhEEEc---CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHH
Confidence 99999999999998 467899999999976533221 12234577899999875 456889999999999999988
Q ss_pred --CCCCCCCCChhHHHHHHHhC----CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 308 --GRRPFWDKTEDGIFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 308 --g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
|..||...+.......+... .........+..++.+.+|+.+||..+|.+|||+.++++
T Consensus 227 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 227 LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred cCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 67888776665555444321 111111122457889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=318.51 Aligned_cols=254 Identities=30% Similarity=0.506 Sum_probs=208.2
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||.|+||.||+|++..+++.||+|.+.... ......+.+..|+.+++.+ +||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-------------~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-------------EEEGIPSTALREISLLKEL-KHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-------------ccccccHHHHHHHHHHHhc-CCCCHHHHHhh
Confidence 567789999999999999999999999999987642 0112335677899999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
+.+.+.+++|+||++ ++|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++ .++.++|+|
T Consensus 67 ~~~~~~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d 141 (282)
T cd07829 67 IHTERKLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLAD 141 (282)
T ss_pred hhcCCceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEec
Confidence 999999999999997 58988875432 4699999999999999999999999999999999999998 478999999
Q ss_pred eccccccCCCC-CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC-----
Q 008197 258 FGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----- 329 (574)
Q Consensus 258 FG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~----- 329 (574)
||++....... ......++..|+|||++.+ .++.++|||||||++|+|++|++||........+..+.....
T Consensus 142 ~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (282)
T cd07829 142 FGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEE 221 (282)
T ss_pred CCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHH
Confidence 99997654332 2334567888999998754 458899999999999999999999987765555444432110
Q ss_pred -------------CCC-------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 330 -------------DFR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 330 -------------~~~-------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
.++ ...++.++..+.++|.+||..+|++||++.+++.||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 222 SWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred HHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 000 01234567889999999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=345.58 Aligned_cols=256 Identities=30% Similarity=0.474 Sum_probs=197.5
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|+.++.||+||||.||+++++.+|+.||||+|.... .......+.+|+.+|.+| +|||||++
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--------------s~~~~skI~rEVk~LArL-nHpNVVRY 542 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--------------SDKLYSKILREVKLLARL-NHPNVVRY 542 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--------------HHHHHHHHHHHHHHHhhc-CCcceeee
Confidence 346788999999999999999999999999999997651 123456789999999999 69999998
Q ss_pred EEEEEc--------------------------------------------------------------------------
Q 008197 175 YNAFED-------------------------------------------------------------------------- 180 (574)
Q Consensus 175 ~~~~~~-------------------------------------------------------------------------- 180 (574)
|..|..
T Consensus 543 ysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d 622 (1351)
T KOG1035|consen 543 YSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDD 622 (1351)
T ss_pred ehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccc
Confidence 653300
Q ss_pred ----C-----------------------------------------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHH
Q 008197 181 ----D-----------------------------------------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215 (574)
Q Consensus 181 ----~-----------------------------------------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~ 215 (574)
+ -.+||-||||+.-++.+.+..+.... ....++.
T Consensus 623 ~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wr 701 (1351)
T KOG1035|consen 623 SDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWR 701 (1351)
T ss_pred ccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHH
Confidence 0 14789999998866665553332211 3678899
Q ss_pred HHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccC-------------------CCCCccccccC
Q 008197 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------------------PGKKFQDIVGS 276 (574)
Q Consensus 216 i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~-------------------~~~~~~~~~gt 276 (574)
++++|++||.|+|+.|||||||||.||+|+ .+..|||+|||+|.... +....+..+||
T Consensus 702 LFreIlEGLaYIH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGT 778 (1351)
T KOG1035|consen 702 LFREILEGLAYIHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGT 778 (1351)
T ss_pred HHHHHHHHHHHHHhCceeeccCCcceeEEc---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccce
Confidence 999999999999999999999999999999 58899999999997621 01134567999
Q ss_pred ccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHcc
Q 008197 277 AYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 351 (574)
Q Consensus 277 ~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L 351 (574)
..|+|||++.+ .|+.|+|+||||||||||+. ||....+. .++.++..+..+.+...+..--+.-..+|++||
T Consensus 779 alYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 779 ALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred eeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHh
Confidence 99999999864 47889999999999999996 57544332 344444444333332222222344578999999
Q ss_pred ccCCCCCCCHHHHhcCccccc
Q 008197 352 VKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 352 ~~dp~~Rps~~~~l~hp~~~~ 372 (574)
+.||.+||||.++|++.||-.
T Consensus 856 ~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred cCCCccCCCHHHHhhccCCCc
Confidence 999999999999999999974
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=310.21 Aligned_cols=247 Identities=27% Similarity=0.414 Sum_probs=206.9
Q ss_pred eecccccccCCeEEEEEEEcCCC----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 99 TIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.+.||.|+||.||+|.+..++ ..||+|.+..... ......+..|+.+++.+ +||||+++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~~~~i~~~ 66 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--------------EQQIEEFLREARIMRKL-DHPNIVKL 66 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--------------hHHHHHHHHHHHHHHhc-CCCchheE
Confidence 56788999999999999988766 8999999865411 11456788999999999 69999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+..++||||+++++|.+.+.......+++..+..++.||+.||.|||+.+++||||||+||+++ .++.++
T Consensus 67 ~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~ 143 (258)
T smart00219 67 LGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVK 143 (258)
T ss_pred EEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEE
Confidence 99999999999999999999999988554433389999999999999999999999999999999999998 467899
Q ss_pred EEeeccccccCCCCCcc--ccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++.......... ...+++.|+|||.+.. .++.++|||||||++|+|++ |.+||...+.......+......
T Consensus 144 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~ 223 (258)
T smart00219 144 ISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL 223 (258)
T ss_pred EcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC
Confidence 99999997765432222 2347789999998854 46889999999999999998 89999887777777777655432
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ....+.++.+++.+||..+|.+|||+.++++
T Consensus 224 ~~---~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 224 PK---PENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CC---CCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 21 2347899999999999999999999999985
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=316.94 Aligned_cols=250 Identities=20% Similarity=0.277 Sum_probs=205.0
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++.+.||.|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.+ +|||
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~ei~~l~~l-~h~~ 69 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--------------SADMQADFQREAALMAEF-DHPN 69 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--------------CHHHHHHHHHHHHHHHhc-CCCc
Confidence 479999999999999999998743 67899999886541 112345688999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------------CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------------DSRYTEKDAAVVVRQMLRVAAECHLH 230 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~l~~LH~~ 230 (574)
|+++++++..+..+++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++
T Consensus 70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~ 149 (288)
T cd05050 70 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER 149 (288)
T ss_pred hheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999885321 12478889999999999999999999
Q ss_pred CCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHH
Q 008197 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL 306 (574)
Q Consensus 231 ~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ell 306 (574)
+++||||||+||+++ .++.++|+|||++........ .....++..|+|||.+. ..++.++|||||||++|+|+
T Consensus 150 ~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 150 KFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred CeecccccHhheEec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence 999999999999998 478999999999875432221 12234567799999876 45688999999999999999
Q ss_pred h-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 307 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 307 t-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+ |..||.+....+....+..+... . ..+.++.++.+||.+||+.+|.+|||+.++++
T Consensus 227 ~~~~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 227 SYGMQPYYGMAHEEVIYYVRDGNVL-S--CPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred hCCCCCCCCCCHHHHHHHHhcCCCC-C--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7 88999888777777666554321 1 12357889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=310.89 Aligned_cols=244 Identities=24% Similarity=0.362 Sum_probs=204.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++.+.||.|+||.||+|.. .|+.||||.+.... .....+.+|+.+++.+ +||||++++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~----------------~~~~~~~~e~~~l~~l-~~~~i~~~~ 66 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDS----------------TAAQAFLAEASVMTTL-RHPNLVQLL 66 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccch----------------hHHHHHHHHHHHHHhc-CCcceeeeE
Confidence 4689999999999999999975 48899999987541 1346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+..++||||+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++ .++.+||
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l 143 (256)
T cd05039 67 GVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKV 143 (256)
T ss_pred EEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEE
Confidence 9999999999999999999999988655445799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++........ ...++..|+|||.+. +.++.++||||||+++|+|++ |..||...+.......+..... .
T Consensus 144 ~d~g~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~ 218 (256)
T cd05039 144 SDFGLAKEASQGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR---M 218 (256)
T ss_pred cccccccccccccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---C
Confidence 99999987633222 334566799999875 456789999999999999997 9999987776666555544321 1
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+++.+.++|.+||..+|++|||+.+++.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 122457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=323.73 Aligned_cols=252 Identities=24% Similarity=0.352 Sum_probs=205.1
Q ss_pred cceeecccccccCCeEEEEEEEcCC-------CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
.+|.+++.||+|+||.||+|.+... +..||+|.+.... .......+.+|+.+++++.+|
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h 77 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--------------TDKDLSDLVSEMEMMKMIGKH 77 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--------------CHHHHHHHHHHHHHHHhhcCC
Confidence 4799999999999999999986432 2368999876431 122346788999999999669
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
|||+++++++...+.+++|+||+++|+|.+++.... ...++...+..++.||+.||.|||++||+|
T Consensus 78 ~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH 157 (334)
T cd05100 78 KNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIH 157 (334)
T ss_pred CCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 999999999999999999999999999999885432 234788899999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||+++....... .....++..|+|||++.+ .++.++|||||||++|+|++ |.
T Consensus 158 ~dlkp~Nill~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 234 (334)
T cd05100 158 RDLAARNVLVT---EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 234 (334)
T ss_pred cccccceEEEc---CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCC
Confidence 99999999998 478899999999976543221 122344567999998865 46889999999999999998 89
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.||.+.+..+....+..... .......+..+.+|+.+||..+|.+|||+.+++.+
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 235 SPYPGIPVEELFKLLKEGHR---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred CCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 99988877777666654322 11224567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=309.97 Aligned_cols=241 Identities=21% Similarity=0.295 Sum_probs=195.3
Q ss_pred cccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc
Q 008197 103 LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~ 180 (574)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++++ +||||+++++++..
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~ 66 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--------------EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA 66 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--------------ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC
Confidence 3899999999999765 445679999886531 122346788999999999 59999999998864
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecc
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~ 260 (574)
...++||||+++++|.+++.. ....+++..+..++.||+.||.|||++|++||||||+|||++ .++.+||+|||+
T Consensus 67 -~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~ 141 (257)
T cd05115 67 -EALMLVMEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGL 141 (257)
T ss_pred -CCeEEEEEeCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCc
Confidence 468999999999999987743 345789999999999999999999999999999999999998 478899999999
Q ss_pred ccccCCCCCc----cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 261 SDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 261 a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+......... ....+++.|+|||++.. .++.++|||||||++|+|++ |..||...........+..+... .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~ 218 (257)
T cd05115 142 SKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL---D 218 (257)
T ss_pred cccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---C
Confidence 9765432221 11233578999998864 45889999999999999996 99999888777766666554321 1
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+..++++.++|.+||..+|++||++.++++
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22456899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=314.12 Aligned_cols=248 Identities=21% Similarity=0.307 Sum_probs=197.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCE----EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+|++.+.||+|+||.||+|.+..+|.. ||+|.+.... .......+..|+.++..+ +||||
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~~~~~l~~l-~h~~i 71 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--------------GRQTFQEITDHMLAMGSL-DHAYI 71 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--------------chHHHHHHHHHHHHHhcC-CCCCc
Confidence 4689999999999999999998777764 6666654321 112335677888888999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.. ...++|+||+++|+|.+++... ...+++..+..++.||+.||.|||+.+++||||||+|||++ .++
T Consensus 72 v~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~ 146 (279)
T cd05111 72 VRLLGICPG-ASLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDS 146 (279)
T ss_pred ceEEEEECC-CccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCC
Confidence 999998764 5578999999999999988543 35789999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||+++....... .....++..|+|||.+. +.++.++|||||||++|||++ |..||.+.........+..
T Consensus 147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05111 147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK 226 (279)
T ss_pred cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence 999999999976543221 23345778899999875 456889999999999999998 9999987766554444433
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+. .... ....+.++.+++.+||..+|.+|||+.++++
T Consensus 227 ~~-~~~~--~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 227 GE-RLAQ--PQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CC-cCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 32 2221 1235678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=312.23 Aligned_cols=249 Identities=22% Similarity=0.338 Sum_probs=204.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+|+..+.||+|+||.||+|.++.++. .+|||.+.... .....+.+..|+.+++.+ +||||+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~ 69 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--------------TEKQRQDFLSEASIMGQF-SHHNII 69 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--------------CHHHHHHHHHHHHHHhcC-CCCCee
Confidence 368889999999999999999876654 79999886531 122345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++...+..|+||||+++++|.+++.. ....+++..+..++.|++.||.|||+.|++||||||+||+++ .++.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~ 145 (268)
T cd05063 70 RLEGVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLE 145 (268)
T ss_pred EEEEEEccCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCc
Confidence 999999999999999999999999887744 346789999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCCCc----cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+||+|||++......... .....++.|+|||++.. .++.++|||||||++|+|++ |+.||...+.......+..
T Consensus 146 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~ 225 (268)
T cd05063 146 CKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND 225 (268)
T ss_pred EEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc
Confidence 999999998765432211 11223457999998764 45889999999999999997 9999988877777766654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ..+.....+..+.+++.+||..+|.+||++.++++
T Consensus 226 ~~---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 226 GF---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 32 22222357889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=308.75 Aligned_cols=241 Identities=23% Similarity=0.318 Sum_probs=196.5
Q ss_pred ccccccCCeEEEEEEEcCCC---CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.||+|+||.||+|.+..++ ..||+|.+..... ....+.+.+|+.+++.+ +||||+++++++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 65 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI--------------AAGKKEFLREASVMAQL-DHPCIVRLIGVC 65 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc--------------hHHHHHHHHHHHHHHhc-CCCCeeeEEEEE
Confidence 46999999999999876554 7899999876521 12345788999999999 599999999987
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
. .+.+++||||+++|+|.+++... ..+++..+..++.|++.||.|||..+++||||||+|||++ .++.+||+||
T Consensus 66 ~-~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df 139 (257)
T cd05060 66 K-GEPLMLVMELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDF 139 (257)
T ss_pred c-CCceEEEEEeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccc
Confidence 6 45689999999999999988543 4789999999999999999999999999999999999998 4789999999
Q ss_pred ccccccCCCCCc----cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 259 GLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 259 G~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|++......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...+..+....+......
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-- 217 (257)
T cd05060 140 GMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL-- 217 (257)
T ss_pred cccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC--
Confidence 999866433321 11223467999998764 45889999999999999998 99999877776666666544321
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....++..+.++|.+||..+|.+||++.++++
T Consensus 218 -~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 218 -PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 222457889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=309.37 Aligned_cols=247 Identities=24% Similarity=0.349 Sum_probs=204.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+.... ...+.+.+|+.+++.+ +||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----------------~~~~~~~~e~~~l~~l-~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----------------MSVEAFLAEANVMKTL-QHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----------------hHHHHHHHHHHHHHhc-CCCCcceE
Confidence 457999999999999999999854 45679999876531 1345688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++.+.. ...++||||+++++|.+++.......+++..+..++.||+.||.|||+.|++||||||+||+++ ..+.+|
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~ 142 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCK 142 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEE
Confidence 999887 7789999999999999998665556788999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++........ .....++..|+|||++... ++.++|+|||||++|++++ |+.||.+.+.......+....
T Consensus 143 l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-- 220 (260)
T cd05073 143 IADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-- 220 (260)
T ss_pred ECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC--
Confidence 999999876543221 1223456779999988654 5788999999999999998 999998877666666555432
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
........+.++.+++.+||..+|++||++.+++.
T Consensus 221 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 221 -RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 22223567889999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=341.52 Aligned_cols=342 Identities=21% Similarity=0.269 Sum_probs=219.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCC----CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKAN----GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.++|.+.+.||+|+||.||+|++..+ +..||||++..... .+....| .+... .+.+
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----------------~e~~~~e--~l~~~-~~~~ 190 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----------------VEIWMNE--RVRRA-CPNS 190 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----------------hHHHHHH--HHHhh-chhh
Confidence 35799999999999999999999888 89999998754310 0111111 11111 1222
Q ss_pred cceEEEE------EEcCCEEEEEEeccCCCchHHHHHhhcC------------------CCCCHHHHHHHHHHHHHHHHH
Q 008197 171 VVKFYNA------FEDDNYVYIAMELCEGGELLDRILAKKD------------------SRYTEKDAAVVVRQMLRVAAE 226 (574)
Q Consensus 171 iv~~~~~------~~~~~~~~lv~e~~~gg~L~~~l~~~~~------------------~~l~~~~~~~i~~qi~~~l~~ 226 (574)
++.++.. ...+..++||+||+.+++|.+++..... .......+..++.||+.||.|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~y 270 (566)
T PLN03225 191 CADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDG 270 (566)
T ss_pred HHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHH
Confidence 2222111 2456789999999999999988753321 011234567899999999999
Q ss_pred HHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCC--CccccccCccccchHhhhcC----------------
Q 008197 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK---------------- 288 (574)
Q Consensus 227 LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~---------------- 288 (574)
||+++|+||||||+|||++. .++.+||+|||+|+...... .....+||+.|+|||.+...
T Consensus 271 LH~~gIiHRDLKP~NILl~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s 348 (566)
T PLN03225 271 LHSTGIVHRDVKPQNIIFSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS 348 (566)
T ss_pred HHHCCEEeCcCCHHHEEEeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence 99999999999999999984 35789999999998654322 23456899999999965321
Q ss_pred -------CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh-CCCC-----------CCC------CCCCCCCHHH
Q 008197 289 -------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-NKPD-----------FRR------KPWPSISNSA 343 (574)
Q Consensus 289 -------~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~-~~~~-----------~~~------~~~~~~~~~~ 343 (574)
++.++|||||||+||||+++..|+... ...+..++. .... ... ..+...+...
T Consensus 349 p~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 426 (566)
T PLN03225 349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAG 426 (566)
T ss_pred chhccccCCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHH
Confidence 234569999999999999977665321 111111111 1100 000 0001122345
Q ss_pred HHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhhccccchHHhhhhccccc
Q 008197 344 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFD 423 (574)
Q Consensus 344 ~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~ 423 (574)
.+||.+||+.||.+|||+.++|+||||+........ .++++.... ......... +-.+.+...+.
T Consensus 427 ~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~~~~-----~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~ 491 (566)
T PLN03225 427 WELLKSMMRFKGRQRISAKAALAHPYFDREGLLGLS-----VMQNLRLQL---------FRATQQDYG-EAAAWVVFLMA 491 (566)
T ss_pred HHHHHHHccCCcccCCCHHHHhCCcCcCCCCccccc-----ccccccccc---------chhhHHHHH-HHHHHHHHHHH
Confidence 689999999999999999999999999875432111 111110000 000000000 11122333344
Q ss_pred cccCCCCCCcCHHHHHHHHHhhCCCCccHHHHH--HHHHhhcCCCCcceehhchHHH
Q 008197 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL--EILQAIDCNTDGLVDFSEFVAA 478 (574)
Q Consensus 424 ~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~--~~~~~~D~d~dg~I~f~EF~~~ 478 (574)
.-+++.+|-.+..+|..+... + ...+.... .+....+....|..++.+++.-
T Consensus 492 ~~~~~~~~~~~e~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (566)
T PLN03225 492 KSGTEKEGGFTEAQLQELREK--E-PKKKGSAQRNALASALRLQRKGVKTVARTVDE 545 (566)
T ss_pred hcCCCCCCCccHHHHHHhhhh--c-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhhc
Confidence 456778899999999888744 3 22233333 4778888899999999999753
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=333.61 Aligned_cols=248 Identities=28% Similarity=0.474 Sum_probs=198.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.+...+.||+|+||.||+|+++.+|+.||||.+.+.. .....+...+|+++|++| +|||||++++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--------------~~r~~e~~~~EieilkKL-nh~NIVk~f~ 78 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--------------SLRPRERWCREIEILKKL-NHPNIVKLFD 78 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--------------ccchHHHHHHHHHHHHHc-Cchhhhhhcc
Confidence 4677889999999999999999999999999987642 223567889999999999 5999999999
Q ss_pred EEEcCC------EEEEEEeccCCCchHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-
Q 008197 177 AFEDDN------YVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK- 248 (574)
Q Consensus 177 ~~~~~~------~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~- 248 (574)
+-++.. ...+|||||.||+|+..+..- +...+++.++..++..+..||.|||++|||||||||.||++-...
T Consensus 79 iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ged 158 (732)
T KOG4250|consen 79 IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGED 158 (732)
T ss_pred cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCC
Confidence 776543 578999999999999988442 235699999999999999999999999999999999999997432
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhh--cCCCCCcchHhHHHHHHHHHhCCCCCCCCChh----HHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFK 322 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~----~~~~ 322 (574)
....-||+|||.|+.+..+......+||+.|.+||++. ..|+..+|.|||||++|+++||..||...... ++..
T Consensus 159 gq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~ 238 (732)
T KOG4250|consen 159 GQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMW 238 (732)
T ss_pred CceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhh
Confidence 34568999999999999888899999999999999997 45677899999999999999999999554322 2333
Q ss_pred HHHhCCCCCCC----------CCC-------CCCCH----HHHHHHHHccccCCCCCC
Q 008197 323 EVLRNKPDFRR----------KPW-------PSISN----SAKDFVKKLLVKDPRARL 359 (574)
Q Consensus 323 ~i~~~~~~~~~----------~~~-------~~~~~----~~~~li~~~L~~dp~~Rp 359 (574)
.++..++.... -.| ..+++ .+..++..+|..+|.+|.
T Consensus 239 ~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 239 HIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred hhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 33332221100 001 11222 245678889999999998
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=310.00 Aligned_cols=242 Identities=25% Similarity=0.405 Sum_probs=201.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++.+.||+|+||.||++. .+++.||+|.+... ...+.+.+|+.+++.+ +||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-----------------~~~~~~~~e~~~l~~~-~~~~i~~~~ 65 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-----------------VTAQAFLEETAVMTKL-HHKNLVRLL 65 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-----------------chHHHHHHHHHHHHhC-CCCCcCeEE
Confidence 368999999999999999995 57889999988643 1235688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+ .++||||+++++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++ .++.+||
T Consensus 66 ~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl 141 (254)
T cd05083 66 GVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKV 141 (254)
T ss_pred EEEcCCC-cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEE
Confidence 9987654 79999999999999988655555689999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++...... ......+..|+|||.+.+ .++.++|||||||++|+|++ |++||......+....+..+. ..
T Consensus 142 ~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~ 216 (254)
T cd05083 142 SDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY---RM 216 (254)
T ss_pred CCCccceecccc--CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---CC
Confidence 999998754322 122344578999998764 56889999999999999997 999998887766666655432 22
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+++.+.+++.+||..+|.+||++.+++.
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 217 EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 223467899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=311.02 Aligned_cols=246 Identities=20% Similarity=0.311 Sum_probs=191.7
Q ss_pred ccccccCCeEEEEEEEcC--CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.+ +||||+++++.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~ 65 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--------------TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCI 65 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--------------ChHHHHHHHHHHHHHHhC-CCCCcceEEEEEC
Confidence 358999999999996432 34578888765431 112345678899999999 5999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
....+|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 66 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~ 142 (269)
T cd05042 66 ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIG 142 (269)
T ss_pred CCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEe
Confidence 99999999999999999998855432 2356788899999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCC---CccccccCccccchHhhhc--------CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 257 DFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 257 DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
|||++....... ......+++.|+|||++.. .++.++|||||||++|+|++ |..||......+....+
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~ 222 (269)
T cd05042 143 DYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV 222 (269)
T ss_pred ccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence 999986543221 1123456778999998743 34678999999999999999 88898777666665555
Q ss_pred HhCC-CCCCCCCC-CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRNK-PDFRRKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~~-~~~~~~~~-~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.... ..++.+.+ ..+++.+.+++..|+ .||.+|||++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 223 VREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred hhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 4433 22222222 356788899999998 59999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=310.71 Aligned_cols=246 Identities=19% Similarity=0.289 Sum_probs=192.4
Q ss_pred ccccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~ 65 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--------------VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCT 65 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--------------hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEc
Confidence 36899999999999754 3556899998865411 12234688899999999 5999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+...+++||||+++|+|.+++.... ....++..+..++.|++.||.|||+.+++||||||+||+++ .++.+||+
T Consensus 66 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~ 142 (269)
T cd05087 66 EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIG 142 (269)
T ss_pred CCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEC
Confidence 9999999999999999999885432 23456778889999999999999999999999999999998 47889999
Q ss_pred eeccccccCCCCC---ccccccCccccchHhhhc--------CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 257 DFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 257 DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
|||++........ .....|++.|+|||++.+ .++.++|||||||++|+|++ |+.||......+.....
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~ 222 (269)
T cd05087 143 DYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT 222 (269)
T ss_pred CccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH
Confidence 9999875432221 223467889999998853 23678999999999999996 99999776655554433
Q ss_pred HhC-CCCCCCCCC-CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRN-KPDFRRKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~-~~~~~~~~~-~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
... ...++.+.. ...++.+.+++.+|+ .+|.+|||+.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 223 VREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred hhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 322 222222221 246788999999999 68999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=305.96 Aligned_cols=242 Identities=25% Similarity=0.331 Sum_probs=198.3
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
++||+|+||.||+|... ++..||+|.+.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--------------PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--------------CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecC
Confidence 36899999999999854 68899999886531 112334688999999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+..++||||+++++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++ .++.+||+|||++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~ 140 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMS 140 (250)
T ss_pred CccEEEEECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccc
Confidence 9999999999999999877543 35689999999999999999999999999999999999998 4788999999998
Q ss_pred cccCCCCCc--cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCC
Q 008197 262 DFIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337 (574)
Q Consensus 262 ~~~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 337 (574)
......... ....++..|+|||++.+ .++.++||||||+++|++++ |..||.+.........+.... ......
T Consensus 141 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~ 217 (250)
T cd05085 141 RQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY---RMSCPQ 217 (250)
T ss_pred eeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---CCCCCC
Confidence 754332211 12244567999998864 45889999999999999998 999998877666666554432 112234
Q ss_pred CCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 338 SISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 338 ~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.++..+.+++.+||..+|++||++.++++
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 57899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-38 Score=311.64 Aligned_cols=248 Identities=23% Similarity=0.298 Sum_probs=204.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC----EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+|++.+.||+|+||.||+|.++.+|. .||+|.+..... ......+.+|+.+++.+ +||||
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i 71 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--------------PKANKEILDEAYVMASV-DHPHV 71 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--------------HHHHHHHHHHHHHHHhC-CCCCc
Confidence 479999999999999999999877665 589998765421 23456788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.. ...++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++
T Consensus 72 ~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~ 146 (279)
T cd05057 72 VRLLGICLS-SQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQ 146 (279)
T ss_pred ceEEEEEec-CceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCC
Confidence 999999987 7899999999999999987543 34689999999999999999999999999999999999998 477
Q ss_pred CeEEEeeccccccCCCCCcc---ccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||++.......... ...++..|+|||.+. ..++.++|||||||++|++++ |+.||.+....++...+..
T Consensus 147 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05057 147 HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK 226 (279)
T ss_pred eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC
Confidence 89999999998765333221 223456899999875 456889999999999999998 9999988877776666654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+.. ... .+..+..+.+++.+||..+|..||++.++++
T Consensus 227 ~~~-~~~--~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 227 GER-LPQ--PPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCC-CCC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 432 121 1346788999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-38 Score=315.04 Aligned_cols=253 Identities=19% Similarity=0.269 Sum_probs=199.4
Q ss_pred cceeecccccccCCeEEEEEEEcC----------------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHH
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA----------------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~----------------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 159 (574)
++|++.+.||.|+||.||++.+.. ++..||+|.+.... .......+.+|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--------------~~~~~~~~~~E~ 70 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--------------NKNARNDFLKEI 70 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--------------CHHHHHHHHHHH
Confidence 579999999999999999986432 34578999886431 123356788999
Q ss_pred HHHHHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 008197 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLH 230 (574)
Q Consensus 160 ~il~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~l~~LH~~ 230 (574)
.+++.+ +||||+++++++...+..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.
T Consensus 71 ~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 149 (296)
T cd05095 71 KIMSRL-KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL 149 (296)
T ss_pred HHHHhC-CCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 999999 59999999999999999999999999999998885432 12477889999999999999999999
Q ss_pred CCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHH
Q 008197 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL 306 (574)
Q Consensus 231 ~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ell 306 (574)
||+||||||+|||++ .++.++|+|||++..+..... .....+++.|+|||+.. +.++.++|||||||++|||+
T Consensus 150 ~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~ 226 (296)
T cd05095 150 NFVHRDLATRNCLVG---KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL 226 (296)
T ss_pred CeecccCChheEEEc---CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHH
Confidence 999999999999998 478999999999976543221 12234567899999754 55688999999999999999
Q ss_pred h--CCCCCCCCChhHHHHHHHh---C-CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 307 C--GRRPFWDKTEDGIFKEVLR---N-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 307 t--g~~Pf~~~~~~~~~~~i~~---~-~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+ |..||...+..+....... . ......+..+.+++.+.+|+.+||..||.+|||+.++++
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 227 TLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 8 7899977665554443321 1 011111112346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=307.80 Aligned_cols=244 Identities=24% Similarity=0.365 Sum_probs=201.6
Q ss_pred ccccccCCeEEEEEEEcC-CC--CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKA-NG--DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~-~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.||.|++|.||+|.+.. .+ ..||||.+..... ....+.+.+|+.+++++ +||||+++++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 65 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL--------------SDIMDDFLKEAAIMHSL-DHENLIRLYGVV 65 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc--------------HHHHHHHHHHHHHHhhc-CCCCccceeEEE
Confidence 468999999999998765 33 3699999876521 13456788999999999 599999999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
.. ..+++||||+++++|.+.+.......+++..+..++.|++.||.|||++|++||||||+||+++. ++.+||+||
T Consensus 66 ~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~---~~~~kl~df 141 (257)
T cd05040 66 LT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS---DDKVKIGDF 141 (257)
T ss_pred cC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec---CCEEEeccc
Confidence 88 89999999999999999886543357899999999999999999999999999999999999984 689999999
Q ss_pred ccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 259 GLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 259 G~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|++........ .....++..|+|||++.. .++.++|||||||++|+|++ |..||...+..+....+........
T Consensus 142 g~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 221 (257)
T cd05040 142 GLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE 221 (257)
T ss_pred cccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC
Confidence 99987643221 123457788999998865 56888999999999999998 9999988777777666654322222
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. ....|..+.+++.+||..+|++|||+.++++
T Consensus 222 ~--~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 222 R--PEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred C--CccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 1 1356789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=311.89 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=203.8
Q ss_pred cceeecccccccCCeEEEEEEEcC----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+.+|+.+++.+ +||||
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~ni 70 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--------------SEIQVTLLLQESCLLYGL-SHQNI 70 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--------------CHHHHHHHHHHHHHHHhC-CCCCC
Confidence 579999999999999999999875 35789999876431 123456788999999999 69999
Q ss_pred ceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 172 VKFYNAFED-DNYVYIAMELCEGGELLDRILAKKD------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 172 v~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
+++++++.. +...++++||+++++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~ 150 (280)
T cd05043 71 LPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI 150 (280)
T ss_pred CeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE
Confidence 999998765 5778999999999999998754322 458999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 319 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~ 319 (574)
+ .++.+||+|||+++.+..... .....++..|+|||++.+ .++.++|||||||++|++++ |++||...+..+
T Consensus 151 ~---~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 227 (280)
T cd05043 151 D---EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE 227 (280)
T ss_pred c---CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH
Confidence 8 468999999999986543221 122346678999998865 45889999999999999999 999998777666
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+...+..+. .+ .....+++++.+++.+||..+|++|||+.++++
T Consensus 228 ~~~~~~~~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 228 MAAYLKDGY-RL--AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHHHHHcCC-CC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 555544432 21 223456889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=311.08 Aligned_cols=252 Identities=21% Similarity=0.362 Sum_probs=206.7
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+|++.+.||.|+||.||+|+.+. +.+.||+|.+.... .......+.+|+.+++++ +|||
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ 69 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--------------DENLQSEFRRELDMFRKL-SHKN 69 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--------------chHHHHHHHHHHHHHHhc-CCcc
Confidence 468999999999999999998653 34679999876531 112456788999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
|+++++++.+.+..|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||+.+|+||||||+||+
T Consensus 70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nil 149 (275)
T cd05046 70 VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCL 149 (275)
T ss_pred eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEE
Confidence 99999999999999999999999999998854431 26899999999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCC--CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhH
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDG 319 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~ 319 (574)
++ .++.++|+|||++...... .......++..|+|||.+.+ ..+.++||||||+++|+|++ |..||.......
T Consensus 150 i~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~ 226 (275)
T cd05046 150 VS---SQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE 226 (275)
T ss_pred Ee---CCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH
Confidence 98 4788999999998654322 12234467788999998754 45788999999999999998 889997776666
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
....+..+...+.. ...++..+.+++.+||..+|.+|||+.+++..
T Consensus 227 ~~~~~~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 227 VLNRLQAGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHHHHcCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 66666544433322 24578899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=306.46 Aligned_cols=245 Identities=22% Similarity=0.396 Sum_probs=202.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+.||.|+||.||+|.+. .+..+|+|.+.... .....+.+|+.+++++ +||||+++++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~----------------~~~~~~~~e~~~l~~l-~~~~i~~~~~ 66 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA----------------MSEEDFIEEAQVMMKL-SHPKLVQLYG 66 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC----------------CCHHHHHHHHHHHHhC-CCCCeeeEEE
Confidence 6889999999999999999875 46789999886541 1234678899999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++......++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+++||||||+||+++ .++.+||+
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~ 142 (256)
T cd05112 67 VCTERSPICLVFEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVS 142 (256)
T ss_pred EEccCCceEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEEC
Confidence 999999999999999999998877433 35689999999999999999999999999999999999998 47789999
Q ss_pred eeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 257 DFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 257 DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|||++........ .....++..|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+...+.
T Consensus 143 d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05112 143 DFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK 222 (256)
T ss_pred CCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC
Confidence 9999876533221 122345678999998864 56788999999999999998 9999988777666766654432221
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. ...+..+.+|+.+||..+|++|||+.++++
T Consensus 223 ~---~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 223 P---RLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred C---CCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 1 235788999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=312.85 Aligned_cols=249 Identities=27% Similarity=0.349 Sum_probs=196.9
Q ss_pred ceeecccccccCCeEEEEEEE----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 97 RYTIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.|++++.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.+ +||||+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~ 69 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--------------GGNHIADLKKEIEILRNL-YHENIV 69 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--------------cHHHHHHHHHHHHHHHhC-CCCCee
Confidence 478999999999999999974 4578899999986431 122345788999999999 599999
Q ss_pred eEEEEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 173 KFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 173 ~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
++++++... ...++||||++|++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .+
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~ 145 (284)
T cd05079 70 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SE 145 (284)
T ss_pred eeeeEEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CC
Confidence 999998875 6789999999999999887433 34689999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh--------
Q 008197 251 SSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------- 317 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~-------- 317 (574)
+.++|+|||++........ .....|+..|+|||++.+ .++.++|||||||++|+|++++.|+.....
T Consensus 146 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~ 225 (284)
T cd05079 146 HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGP 225 (284)
T ss_pred CCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccc
Confidence 8899999999986543321 124567778999998764 468899999999999999998877533211
Q ss_pred ------hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 318 ------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 318 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.......+.... ..+.+..++..+.+|+.+||+.+|.+|||+.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 226 THGQMTVTRLVRVLEEGK--RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred ccccccHHHHHHHHHcCc--cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011111111111 12223568899999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=311.66 Aligned_cols=241 Identities=17% Similarity=0.254 Sum_probs=189.8
Q ss_pred ccccccCCeEEEEEEEcCCCC-------EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 102 KLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~-------~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
+.||.|+||.||+|.+...+. .||+|.+.... ....+.+..|+.+++.+ +||||+++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---------------~~~~~~~~~e~~~l~~~-~h~~iv~~ 64 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---------------RNYSESFFEAASMMSQL-SHKHLVLN 64 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---------------HHHHHHHHHHHHHHHhC-CCCChhhe
Confidence 369999999999998865543 38888765431 12345678899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC-----
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE----- 249 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~----- 249 (574)
++++..+...++||||+++|+|.+++... ...+++..+..++.||+.||.|||+.||+||||||+|||++..+.
T Consensus 65 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~ 143 (258)
T cd05078 65 YGVCVCGDESIMVQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGN 143 (258)
T ss_pred eeEEEeCCCcEEEEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCC
Confidence 99999999999999999999999887543 346899999999999999999999999999999999999985221
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCC-CCCCCCChhHHHHHHHh
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~-~Pf~~~~~~~~~~~i~~ 326 (574)
.+.++|+|||++...... ....+++.|+|||++.+ .++.++|||||||++|+|++|. +||........ ..+..
T Consensus 144 ~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~ 219 (258)
T cd05078 144 PPFIKLSDPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYE 219 (258)
T ss_pred CceEEecccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHH
Confidence 124799999998654332 33578899999999865 3588999999999999999985 56544443332 23333
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
....++ +..+.++.+||.+||+.+|++|||+.++++.
T Consensus 220 ~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 220 DRHQLP----APKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ccccCC----CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 332222 2355789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=308.63 Aligned_cols=248 Identities=24% Similarity=0.354 Sum_probs=201.9
Q ss_pred cceeecccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+|.+.+.||.|+||.||+|.+... ...||||.+.... .....+.+.+|+.+++.+ +||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--------------~~~~~~~~~~e~~~l~~~-~h~~i~ 70 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--------------SPSVREKFLQEAYIMRQF-DHPHIV 70 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--------------CHHHHHHHHHHHHHHHhC-CCCchh
Confidence 4688999999999999999987544 3579999876531 123456788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+. ..|+||||+++|+|.+++... ...+++..+..++.||+.||.|||+.|++||||||+||+++. ++.
T Consensus 71 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~---~~~ 145 (270)
T cd05056 71 KLIGVITEN-PVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS---PDC 145 (270)
T ss_pred ceeEEEcCC-CcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec---CCC
Confidence 999988764 578999999999999988543 346899999999999999999999999999999999999984 788
Q ss_pred eEEEeeccccccCCCCCcc--ccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~--~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||++.......... ...+++.|+|||.+.. .++.++|||||||++|+|++ |..||.+....+....+..+.
T Consensus 146 ~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 225 (270)
T cd05056 146 VKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE 225 (270)
T ss_pred eEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999997654332221 2234567999998764 45889999999999999986 999998877766666665543
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ...+.++..+.++|.+||..+|.+|||+.+++.
T Consensus 226 ~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 226 RL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred cC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 22 223567899999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=307.36 Aligned_cols=228 Identities=22% Similarity=0.326 Sum_probs=186.1
Q ss_pred cCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCEEEE
Q 008197 107 GQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYI 186 (574)
Q Consensus 107 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~~~l 186 (574)
|.||.||+++++.+|+.||+|.+.+.. ....|...+... .||||+++++++...+.+|+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------------------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------------------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------------------hhhhHHHHHHhc-CCCceeehhhheecCCeEEE
Confidence 899999999999999999999987641 122344444445 49999999999999999999
Q ss_pred EEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCC
Q 008197 187 AMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266 (574)
Q Consensus 187 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~ 266 (574)
||||++||+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++ .++.++|+|||++.....
T Consensus 63 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~~~~~ 137 (237)
T cd05576 63 VLQHAEGGKLWSHISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWSEVED 137 (237)
T ss_pred EEecCCCCCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchhcccc
Confidence 99999999999988543 4689999999999999999999999999999999999998 477899999998866543
Q ss_pred CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008197 267 GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 345 (574)
Q Consensus 267 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 345 (574)
. .....++..|+|||.+.+ .++.++||||+||++|+|++|+.||...... + ........ .+.+++.+.+
T Consensus 138 ~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~~--~~~~~~~~~~ 207 (237)
T cd05576 138 S--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLNI--PEWVSEEARS 207 (237)
T ss_pred c--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccCC--cccCCHHHHH
Confidence 2 234466788999998864 4688999999999999999999987543211 0 00111111 1347889999
Q ss_pred HHHHccccCCCCCCCH-----HHHhcCccc
Q 008197 346 FVKKLLVKDPRARLTA-----AQALSHPWV 370 (574)
Q Consensus 346 li~~~L~~dp~~Rps~-----~~~l~hp~~ 370 (574)
+|.+||+.||.+||++ .++++||||
T Consensus 208 li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 208 LLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 9999999999999985 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=309.93 Aligned_cols=247 Identities=26% Similarity=0.367 Sum_probs=197.9
Q ss_pred ccccccCCeEEEEEEEcCCC------CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 102 KLLGHGQFGYTYVATDKANG------DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.||+|+||.||+|.+.... ..+|||.+.+.. .......+.+|+.+++.+ +||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 65 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--------------TDQEKKEFLKEAHLMSNF-NHPNIVKLL 65 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--------------chhhHHHHHHHHHHHHhc-CCCCeeeEe
Confidence 36899999999999876433 689999875431 112345688899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKK-----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-- 248 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~-- 248 (574)
+++...+..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+.+++|+||||+||+++...
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~ 145 (269)
T cd05044 66 GVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYD 145 (269)
T ss_pred eeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCC
Confidence 99999999999999999999999886432 23478899999999999999999999999999999999998522
Q ss_pred CCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 323 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~ 323 (574)
....++|+|||++........ .....++..|+|||++.+ ..+.++|||||||++|+|++ |..||...+.......
T Consensus 146 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~ 225 (269)
T cd05044 146 ADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH 225 (269)
T ss_pred CCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH
Confidence 123799999999876533221 123356788999998764 46889999999999999998 9999987766665555
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+..+. .......+|..+.+||.+||..+|.+||++.++++
T Consensus 226 ~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 226 VTAGG---RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HhcCC---ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 54332 11223467889999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=307.43 Aligned_cols=259 Identities=28% Similarity=0.489 Sum_probs=208.6
Q ss_pred eeecccccccCCeEEEEEEEcC-CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
|++.+.||+|+||.||+|.+.. +++.+|+|.+........ ..+.........+..|+.++....+||||+++++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~-----~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFG-----KDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccc-----cccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 7889999999999999999887 678999998864321100 0001122345567889998876447999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCe
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++..++..++||||++|++|.+.+.. .....+++..++.++.|++.||.|||+ .+++|+||+|+||+++ .++.+
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~ 153 (269)
T cd08528 77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKV 153 (269)
T ss_pred eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcE
Confidence 99999999999999999999887743 234578999999999999999999996 6899999999999998 47889
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
||+|||++.............|+..|+|||++.+. ++.++||||||+++|+|++|+.||...........+......
T Consensus 154 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 231 (269)
T cd08528 154 TITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE-- 231 (269)
T ss_pred EEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC--
Confidence 99999999876554444566899999999988654 588999999999999999999999777666555555443322
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+++.+.++|.+||..||++||++.++..
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 232 PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 1122356789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=303.21 Aligned_cols=242 Identities=25% Similarity=0.333 Sum_probs=198.5
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
++||.|+||.||+|.+.. ++.||+|.+..... ......+.+|+++++++ +||||+++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--------------~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--------------PDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--------------HHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecC
Confidence 469999999999999877 99999998865421 12446788999999999 599999999999999
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
...++||||++|++|.+++... ...+++..+..++.+++.||.|||+++++||||||+|||++ .++.+||+|||++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~ 140 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMS 140 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeecccc
Confidence 9999999999999999887543 34689999999999999999999999999999999999998 4789999999999
Q ss_pred cccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCC
Q 008197 262 DFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336 (574)
Q Consensus 262 ~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 336 (574)
......... ....++..|+|||.+.+ .++.++|||||||++|+|++ |..||...........+.... .....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~---~~~~~ 217 (251)
T cd05041 141 REEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY---RMPAP 217 (251)
T ss_pred ccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC---CCCCC
Confidence 765422111 12234567999998764 46889999999999999999 899997776655555554332 11122
Q ss_pred CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 337 PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 337 ~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...+..+.+++.+||..+|.+|||+.++++
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 457889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=323.26 Aligned_cols=317 Identities=22% Similarity=0.323 Sum_probs=249.8
Q ss_pred CCCCCccccccchHHhhhccccCCCCCCCcchhhhHHHHHHHHHHHHhhhhhcccccccCcccCCCCCCCCcccccccce
Q 008197 19 NNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98 (574)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 98 (574)
-..+-||++.....++.+.....++.+.....|+|..-+..+.....-+..+.+...-.++.|.- ..|.... .+.
T Consensus 195 eGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~nKptvygvSPn~--DkWEmeR---tdI 269 (1157)
T KOG4278|consen 195 EGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKKNKPTVYGVSPNA--DKWEMER---TDI 269 (1157)
T ss_pred cceEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccCCCCceeeecCCc--chhhccc---hhe
Confidence 34455677777777777777777777777777877766665544443333333222222222222 1121111 235
Q ss_pred eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
.+..+||.|.||.||.|.++.-.-.||||.++... ..+++|..|..+|+.+ .|||+|+++++|
T Consensus 270 tMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt----------------MeveEFLkEAAvMKei-kHpNLVqLLGVC 332 (1157)
T KOG4278|consen 270 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMKEI-KHPNLVQLLGVC 332 (1157)
T ss_pred eeeeccCCCcccceeeeeeeccceeeehhhhhhcc----------------hhHHHHHHHHHHHHhh-cCccHHHHhhhh
Confidence 56779999999999999999988899999987652 3578899999999999 599999999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
..+..+|||+|||..|+|+++|.+.....++.-...+++.||..|++||...++|||||-..|+|+. ++..||++||
T Consensus 333 T~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADF 409 (1157)
T KOG4278|consen 333 THEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADF 409 (1157)
T ss_pred ccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeecc
Confidence 9999999999999999999999777667788888899999999999999999999999999999998 6889999999
Q ss_pred ccccccCCCCCcccccc---CccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 259 GLSDFIKPGKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 259 G~a~~~~~~~~~~~~~g---t~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
|+++++.... ++.-.| ..-|.|||-+. ...+.++|||+|||+|||+.| |-.||.+-+...++..+-++ |+-
T Consensus 410 GLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg---yRM 485 (1157)
T KOG4278|consen 410 GLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG---YRM 485 (1157)
T ss_pred chhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc---ccc
Confidence 9999886433 333333 34699999664 567999999999999999998 99999998888777766544 233
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHH
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQA 364 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~ 364 (574)
.....+++...+|++.||+..|.+||++.++
T Consensus 486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred cCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 3336789999999999999999999999887
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=307.58 Aligned_cols=275 Identities=30% Similarity=0.478 Sum_probs=211.6
Q ss_pred CCCCCCCcccccc-cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHH
Q 008197 83 GKRTDFGYDKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161 (574)
Q Consensus 83 ~~~~~~~~~~~~~-~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i 161 (574)
+........+.|. .+|.+.++||.|.|++||+|.|..+.+.||+|+.+.. ....+....||.+
T Consensus 64 GGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----------------qhYtEaAlDEIkl 127 (590)
T KOG1290|consen 64 GGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----------------QHYTEAALDEIKL 127 (590)
T ss_pred CCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----------------hHHHHHHHHHHHH
Confidence 4444555667787 8999999999999999999999999999999998754 2456778899999
Q ss_pred HHHhcCCC-------CcceEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 008197 162 LQALAGHE-------NVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 230 (574)
Q Consensus 162 l~~l~~hp-------niv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~ 230 (574)
|++++.+. +||+|++.|.- +.++|+|+|++ |.+|+.+|.....+.++...++.|++|||.||.|||..
T Consensus 128 L~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e 206 (590)
T KOG1290|consen 128 LQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE 206 (590)
T ss_pred HHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 99987432 69999999974 56999999999 88999999888888999999999999999999999975
Q ss_pred -CCEeecCCCCcEEEccCC-------------------------------------------------------------
Q 008197 231 -GLVHRDMKPENFLFKSAK------------------------------------------------------------- 248 (574)
Q Consensus 231 -~iiHrDlkp~Nill~~~~------------------------------------------------------------- 248 (574)
||||.||||+|||+....
T Consensus 207 cgIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~ 286 (590)
T KOG1290|consen 207 CGIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEA 286 (590)
T ss_pred cCccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhh
Confidence 999999999999992210
Q ss_pred --------------------------------------------------C-----------------------------
Q 008197 249 --------------------------------------------------E----------------------------- 249 (574)
Q Consensus 249 --------------------------------------------------~----------------------------- 249 (574)
.
T Consensus 287 ~l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~ 366 (590)
T KOG1290|consen 287 SLAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLS 366 (590)
T ss_pred hhcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhccccccccccccc
Confidence 0
Q ss_pred -----------------------CCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHH
Q 008197 250 -----------------------DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 305 (574)
Q Consensus 250 -----------------------~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~el 305 (574)
+..|||+|||-|+++. ..++.-+.|..|+|||++.+ .|++.+||||++|++|||
T Consensus 367 s~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FEL 444 (590)
T KOG1290|consen 367 SPSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFEL 444 (590)
T ss_pred CcCCccccccccccCCCCCCCccceeEEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHh
Confidence 0124556666555432 22334478889999998765 689999999999999999
Q ss_pred HhCCCCCCCCCh------hHHHHHHH-----------h-CCC--CC-----------CCCCCC---------CCC----H
Q 008197 306 LCGRRPFWDKTE------DGIFKEVL-----------R-NKP--DF-----------RRKPWP---------SIS----N 341 (574)
Q Consensus 306 ltg~~Pf~~~~~------~~~~~~i~-----------~-~~~--~~-----------~~~~~~---------~~~----~ 341 (574)
+||...|..... ..-+..|+ . ++. .| ...+|+ .+| .
T Consensus 445 aTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~ 524 (590)
T KOG1290|consen 445 ATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQ 524 (590)
T ss_pred hcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHH
Confidence 999999953321 11111111 1 110 00 012233 123 3
Q ss_pred HHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 342 ~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
++.+||.-||+.+|++||||.++|+|||+......
T Consensus 525 ~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 525 QFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred HHHHHHHHHHhcCccccccHHHHhcCccccCCCCC
Confidence 57899999999999999999999999999976553
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=341.51 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=212.2
Q ss_pred cceeecccccccCCeEEEEEEEcCC-C----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN-G----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~-~----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..-.+.+.||+|+||.||.|..... | ..||||.+.+. ........|.+|..+|+.+ +|||
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--------------~~~~~~~~Fl~Ea~~m~~f-~HpN 756 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--------------SSEQEVSDFLKEALLMSKF-DHPN 756 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--------------CCHHHHHHHHHHHHHHhcC-CCcc
Confidence 4567889999999999999986543 3 24999988764 2345677899999999999 6999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
||++++++-+....+|++|||+||+|..+|...+ ...++......++.+|+.|++||+++++|||||...|+||+
T Consensus 757 iv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~ 836 (1025)
T KOG1095|consen 757 IVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD 836 (1025)
T ss_pred eeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec
Confidence 9999999999999999999999999999996542 35689999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEeeccccccCCCCCcc--cc-ccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKFQ--DI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 320 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~~--~~-~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~ 320 (574)
....|||+|||+|+.+.....+. .. .-...|||||.+. +.++.++|||||||+|||++| |..||.+.+..++
T Consensus 837 ---~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v 913 (1025)
T KOG1095|consen 837 ---ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV 913 (1025)
T ss_pred ---ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence 46899999999999553322221 11 2235799999886 677999999999999999999 9999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+..++.+. +.++.+..|..+.++|..||+.+|++||++..|++
T Consensus 914 ~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 914 LLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 98888776 22333578889999999999999999999999987
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=307.55 Aligned_cols=249 Identities=25% Similarity=0.394 Sum_probs=195.1
Q ss_pred cceeecccccccCCeEEEEEE----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+|++.+.||+|+||.||+|. +..++..||||.+.... ......+.+|+.+++.+ +||||
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~i 67 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---------------AEHLRDFEREIEILKSL-QHDNI 67 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---------------HHHHHHHHHHHHHHHhC-CCCCe
Confidence 468999999999999999997 34578899999986531 12345788999999999 59999
Q ss_pred ceEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 172 VKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 172 v~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
+++++++.. ...+++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .
T Consensus 68 v~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~ 143 (284)
T cd05081 68 VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---S 143 (284)
T ss_pred eEEEEEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---C
Confidence 999998754 45789999999999999987433 34689999999999999999999999999999999999998 4
Q ss_pred CCCeEEEeeccccccCCCCCc----cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH-----
Q 008197 250 DSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG----- 319 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~----- 319 (574)
++.+||+|||++......... ....++..|+|||++.+ .++.++|||||||++|||++|..|+......-
T Consensus 144 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd05081 144 ENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMG 223 (284)
T ss_pred CCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcc
Confidence 788999999999876433221 11234456999998865 46888999999999999999887764332110
Q ss_pred ----------HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 ----------IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+..++.....+ +....++.++.+||.+||..+|++|||+.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 224 NDKQGQMIVYHLIELLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred cccccccchHHHHHHHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 011122222111 222457889999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=311.13 Aligned_cols=249 Identities=23% Similarity=0.294 Sum_probs=199.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC----EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.+ +||||
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~~~~l-~h~ni 71 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--------------GPKANVEFMDEALIMASM-DHPHL 71 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--------------CHHHHHHHHHHHHHHHhC-CCCCc
Confidence 468899999999999999999887776 46888775431 112234678999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++... ..++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++ .++
T Consensus 72 v~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~ 146 (303)
T cd05110 72 VRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPN 146 (303)
T ss_pred ccEEEEEcCC-CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCC
Confidence 9999998764 467999999999999987543 34689999999999999999999999999999999999997 467
Q ss_pred CeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||++........ .....++..|+|||++.+ .++.++|||||||++|+|++ |..||.+........ ++.
T Consensus 147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~-~~~ 225 (303)
T cd05110 147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD-LLE 225 (303)
T ss_pred ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH
Confidence 899999999986543222 223456778999998865 45889999999999999997 999997766544443 333
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
....++ ..+..+..+.+++.+||..+|.+||++.+++..
T Consensus 226 ~~~~~~--~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 226 KGERLP--QPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred CCCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 332222 224567889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=304.99 Aligned_cols=241 Identities=18% Similarity=0.201 Sum_probs=187.7
Q ss_pred ccccccCCeEEEEEEEcC------------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 102 KLLGHGQFGYTYVATDKA------------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~------------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
+.||+|+||.||+|.... ....||+|.+.... ......+..|+.+++.+ +||
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---------------~~~~~~~~~~~~~l~~l-~hp 64 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---------------RDISLAFFETASMMRQV-SHK 64 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---------------hhHHHHHHHHHHHHHhC-CCC
Confidence 368999999999997432 22358888875431 12234678889999999 599
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK- 248 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~- 248 (574)
||+++++++......++||||+++|+|..++. .....+++..+..++.||+.||.|||+.+|+||||||+|||++..+
T Consensus 65 ~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 65 HIVLLYGVCVRDVENIMVEEFVEFGPLDLFMH-RKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGI 143 (262)
T ss_pred CEeeEEEEEecCCCCEEEEecccCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCc
Confidence 99999999999999999999999999877653 3345799999999999999999999999999999999999997421
Q ss_pred ---CCCCeEEEeeccccccCCCCCccccccCccccchHhhh--cCCCCCcchHhHHHHHHHHH-hCCCCCCCCChhHHHH
Q 008197 249 ---EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFK 322 (574)
Q Consensus 249 ---~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~ell-tg~~Pf~~~~~~~~~~ 322 (574)
....++++|||++...... ....|+..|+|||++. ..++.++|||||||++|+|+ +|..||......+..
T Consensus 144 ~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~- 219 (262)
T cd05077 144 DGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE- 219 (262)
T ss_pred cCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-
Confidence 1123899999998654322 2346888999999885 34688999999999999998 588888665543332
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 323 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.+...... .....++++.+||.+||+.||.+||++.+++++
T Consensus 220 ~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 220 RFYEGQCM----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHhcCcc----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 22222211 112346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=307.59 Aligned_cols=240 Identities=17% Similarity=0.191 Sum_probs=188.9
Q ss_pred cccccCCeEEEEEEEcCC------------------------CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHH
Q 008197 103 LLGHGQFGYTYVATDKAN------------------------GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~------------------------~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 158 (574)
.||+|+||.||+|....+ ...||+|.+.... ......+..|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---------------~~~~~~~~~~ 66 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---------------RDIALAFFET 66 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---------------HHHHHHHHHH
Confidence 699999999999975322 2358888876431 1223567788
Q ss_pred HHHHHHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008197 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 238 (574)
Q Consensus 159 ~~il~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlk 238 (574)
+.+++.+ +||||+++++++......++||||+++|+|...+.. ..+.+++..+..++.||+.||.|||+.+|+|||||
T Consensus 67 ~~~~~~l-~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk 144 (274)
T cd05076 67 ASLMSQV-SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVC 144 (274)
T ss_pred HHHHhcC-CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCC
Confidence 9999999 599999999999999999999999999999877643 34678999999999999999999999999999999
Q ss_pred CCcEEEccCC----CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHH-hCCCC
Q 008197 239 PENFLFKSAK----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL-CGRRP 311 (574)
Q Consensus 239 p~Nill~~~~----~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~ell-tg~~P 311 (574)
|+|||++..+ ....+||+|||++...... ....++..|+|||.+.+ .++.++|||||||++|||+ +|..|
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p 221 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVP 221 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 9999997421 2335899999988643221 22367889999998864 3588999999999999985 69999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
|......+... +.......+ ...++.+.++|.+||..+|.+|||+.+++++
T Consensus 222 ~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 222 LKERTPSEKER-FYEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred ccccChHHHHH-HHHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 98766544433 222222222 2245789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=303.62 Aligned_cols=245 Identities=18% Similarity=0.282 Sum_probs=191.0
Q ss_pred cccccCCeEEEEEEEcCC--CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc
Q 008197 103 LLGHGQFGYTYVATDKAN--GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~ 180 (574)
.||+|+||.||+|..... ...+++|.+.... .....+.+.+|+.+++.+ +||||+++++.+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~ 66 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--------------SSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVE 66 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--------------ChHHHHHHHHHHHHHhcc-CCcchhheEEEecC
Confidence 599999999999975433 2356677665431 112346788999999999 59999999999999
Q ss_pred CCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 181 DNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
....|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.+|+||||||+|||++ .++.+||+||
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Df 143 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDY 143 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEeccc
Confidence 999999999999999999885432 23467778889999999999999999999999999999998 4788999999
Q ss_pred ccccccCCCC---CccccccCccccchHhhhc--------CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 259 GLSDFIKPGK---KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 259 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
|++....... .....+|+..|+|||++.. .++.++|||||||++|+|++ |..||......+.+..++.
T Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 223 (268)
T cd05086 144 GIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIK 223 (268)
T ss_pred ccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence 9986432211 1234578899999998742 23678999999999999997 5778877777666666655
Q ss_pred CCC-CCCCCC-CCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKP-DFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~-~~~~~~-~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
... ....+. ...+++.+.+++..|| .+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 224 DQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred hcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 432 222222 2346788999999999 67999999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=304.23 Aligned_cols=238 Identities=17% Similarity=0.194 Sum_probs=188.8
Q ss_pred ccccccCCeEEEEEEEcCCC----------CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 102 KLLGHGQFGYTYVATDKANG----------DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+.||+|+||.||+|.+..++ ..|++|.+.... .....+.+|+.+++.+ +||||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i 63 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----------------RDSLAFFETASLMSQL-SHKHL 63 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----------------hhHHHHHHHHHHHHcC-CCcch
Confidence 46899999999999988776 357888765431 1146788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC---
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--- 248 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--- 248 (574)
+++++++.. ...++||||+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++...
T Consensus 64 ~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~ 141 (259)
T cd05037 64 VKLYGVCVR-DENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNE 141 (259)
T ss_pred hheeeEEec-CCcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCcccc
Confidence 999999988 77899999999999998875432 3789999999999999999999999999999999999998522
Q ss_pred -CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHH
Q 008197 249 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE 323 (574)
Q Consensus 249 -~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~ 323 (574)
....+||+|||++..... .....++..|+|||++.+. ++.++|||||||++|+|++ |..||...+.......
T Consensus 142 ~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~ 218 (259)
T cd05037 142 GYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERF 218 (259)
T ss_pred CCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHH
Confidence 112799999999986543 2234677889999998754 5889999999999999999 6888866654433332
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. .....+. ..+..+.++|.+||..+|.+|||+.++++
T Consensus 219 ~~-~~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 219 YQ-DQHRLPM----PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred Hh-cCCCCCC----CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 22 1111111 12378999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=304.66 Aligned_cols=249 Identities=20% Similarity=0.333 Sum_probs=199.3
Q ss_pred eeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 98 YTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
|.+.+.||+|+||.||+|.++ .+++.||||++.... ......+.+.+|+.+++.+ +||||+++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~i~~~ 66 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-------------FSSSDIEEFLREAACMKEF-DHPNVIKL 66 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-------------CChHHHHHHHHHHHHHhcC-CCCCcceE
Confidence 577889999999999999864 357899999986531 1123456788999999999 59999999
Q ss_pred EEEEEcCC------EEEEEEeccCCCchHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 175 YNAFEDDN------YVYIAMELCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 175 ~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
++++.... ..++++||+.+|+|.+++.... ...+++..+..++.||+.||.|||+.||+||||||+||++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili 146 (273)
T cd05074 67 IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML 146 (273)
T ss_pred EEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE
Confidence 99886432 3578999999999988764322 2357899999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCChhH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDG 319 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~ 319 (574)
+ .++.+||+|||++........ .....+++.|++||.+... ++.++|||||||++|+|++ |++||.+.....
T Consensus 147 ~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~ 223 (273)
T cd05074 147 N---ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE 223 (273)
T ss_pred c---CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH
Confidence 8 478899999999986543221 1233556789999988654 5788999999999999999 899998777666
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
....+...... . ..+..+..+.+++.+||..+|..|||+.+++.
T Consensus 224 ~~~~~~~~~~~-~--~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 224 IYNYLIKGNRL-K--QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHcCCcC-C--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66666544321 1 11457789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=302.36 Aligned_cols=243 Identities=23% Similarity=0.287 Sum_probs=191.1
Q ss_pred ccccccCCeEEEEEEEcC---CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
+.||+|+||.||+|.+.. .+..||||.+.... .....+.+.+|+.+++.+ +||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 65 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--------------DLEEVEQFLKEGIIMKDF-SHPNVLSLLGIC 65 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--------------CHHHHHHHHHHHHHHccC-CCCCcceEEEEe
Confidence 468999999999998653 34579999875421 112345778899999999 599999999977
Q ss_pred E-cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEe
Q 008197 179 E-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 179 ~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~D 257 (574)
. .++..++||||+.+|+|.+++... ...+++..+..++.||+.||.|||+.+|+||||||+|||++ .++.+||+|
T Consensus 66 ~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~d 141 (262)
T cd05058 66 LPSEGSPLVVLPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVAD 141 (262)
T ss_pred ecCCCCcEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECC
Confidence 5 466789999999999999987533 34567888899999999999999999999999999999998 477899999
Q ss_pred eccccccCCCC-----CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 258 FGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 258 FG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
||++....... ......+++.|+|||++.+ .++.++|||||||++|||++ |.+||...........+..+...
T Consensus 142 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (262)
T cd05058 142 FGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL 221 (262)
T ss_pred ccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC
Confidence 99987543211 1123456778999998754 56889999999999999999 56677666665655555443221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ...+++.+.+++.+||..+|++||++.+++.
T Consensus 222 -~~--~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 222 -LQ--PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred -CC--CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 11 1346788999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=308.32 Aligned_cols=258 Identities=17% Similarity=0.206 Sum_probs=185.9
Q ss_pred ccccceeecccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
...++|++.+.||+|+||.||+|.+..+ +..+|+|+.......... +..............+...+..+ +|+
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~-~h~ 83 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVM----ETLVYNNIYDIDKIALWKNIHNI-DHL 83 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhh----HHHHHHhhhhHHHHHHHHHhccC-CCC
Confidence 3456899999999999999999998777 667788764332110000 00000000111222334445556 599
Q ss_pred CcceEEEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 170 NVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 170 niv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
+|+.+++++.... ..+++++++. .++.+.+. .....++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~ 160 (294)
T PHA02882 84 GIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFK--RIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD 160 (294)
T ss_pred CCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 9999999776543 4578888874 45655542 224468889999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCC--------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT 316 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~ 316 (574)
.++.++|+|||+|+...... ......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+..
T Consensus 161 ---~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 161 ---GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred ---CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 46789999999997653211 11234799999999988754 6889999999999999999999997763
Q ss_pred hh-HHH--------HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 317 ED-GIF--------KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 317 ~~-~~~--------~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. ... ..+..+. ...+..++.+.+++..|+..+|.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 238 HNGNLIHAAKCDFIKRLHEGK-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred cchHHHHHhHHHHHHHhhhhh-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 32 211 2222221 123456789999999999999999999999864
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=314.25 Aligned_cols=263 Identities=26% Similarity=0.438 Sum_probs=218.0
Q ss_pred cccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc---
Q 008197 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--- 166 (574)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--- 166 (574)
+.+.+..+|.|....|+|-|+.|..|.+...|+.||||+|..+.+ -...=+.|++||++|.
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----------------M~KtGl~EleiLkKL~~AD 489 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----------------MHKTGLKELEILKKLNDAD 489 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----------------HhhhhhHHHHHHHHhhccC
Confidence 345577899999999999999999999999999999999987632 2233468999999995
Q ss_pred --CCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 167 --GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 167 --~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
+--|+++++..|...+++|||+|-+ .-+|.+.|..- ..-.|....++.|+.|++.||..|-..||+|.||||+|||
T Consensus 490 ~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiL 568 (752)
T KOG0670|consen 490 PEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNIL 568 (752)
T ss_pred chhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceE
Confidence 2458999999999999999999998 45888877432 2345888999999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
++. ....+||||||.|.++..+.. +.+..+..|.|||++.| .|....|+||+||+||||+||+..|.+.+...++.
T Consensus 569 VNE--~k~iLKLCDfGSA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr 645 (752)
T KOG0670|consen 569 VNE--SKNILKLCDFGSASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR 645 (752)
T ss_pred ecc--CcceeeeccCccccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHH
Confidence 984 567899999999988765543 55667788999998776 56899999999999999999999999999888777
Q ss_pred HHHhCCCCCCCCC-------------------------------------------------CCCCC-------HHHHHH
Q 008197 323 EVLRNKPDFRRKP-------------------------------------------------WPSIS-------NSAKDF 346 (574)
Q Consensus 323 ~i~~~~~~~~~~~-------------------------------------------------~~~~~-------~~~~~l 346 (574)
..+..+..|+... .+.++ ..+.+|
T Consensus 646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdL 725 (752)
T KOG0670|consen 646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDL 725 (752)
T ss_pred HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHH
Confidence 6655444433210 00112 247899
Q ss_pred HHHccccCCCCCCCHHHHhcCccccc
Q 008197 347 VKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 347 i~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
|..||..||++|.|..++|.||||+.
T Consensus 726 Ldkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 726 LDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHhccChhhcCCHHHHhcCCcccC
Confidence 99999999999999999999999974
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=302.56 Aligned_cols=250 Identities=26% Similarity=0.405 Sum_probs=199.0
Q ss_pred cceeecccccccCCeEEEEEEEcC----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+.|++.+.||+|+||.||+|.... ++..||||.+..... ....+.+.+|+.+++.+ .||||
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~--------------~~~~~~~~~ei~~l~~l-~~~~i 68 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE--------------EQHRSDFEREIEILRTL-DHENI 68 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc--------------hHHHHHHHHHHHHHHhC-CCCCh
Confidence 368888999999999999998643 478999999876421 12356789999999999 59999
Q ss_pred ceEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 172 VKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 172 v~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
+++++++.. ....++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++ .
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~ 144 (284)
T cd05038 69 VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---S 144 (284)
T ss_pred heEEeeeecCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---C
Confidence 999999887 668999999999999999885432 3589999999999999999999999999999999999998 4
Q ss_pred CCCeEEEeeccccccCCCCCc----cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH-----
Q 008197 250 DSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG----- 319 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~----- 319 (574)
++.++|+|||++......... ....++..|+|||.+.+ .++.++|||||||++|+|++|..||.......
T Consensus 145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~ 224 (284)
T cd05038 145 EDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIG 224 (284)
T ss_pred CCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccc
Confidence 689999999999876532221 12345567999998764 45888999999999999999999986532211
Q ss_pred ---------HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 ---------IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ---------~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+.....++ .....+.++.+|+.+||..+|.+|||+.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 225 IAQGQMIVTRLLELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred cccccccHHHHHHHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 1222222222222 22356788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=310.59 Aligned_cols=245 Identities=24% Similarity=0.408 Sum_probs=205.6
Q ss_pred eecccccccCCeEEEEEEEcC--CC--CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 99 TIGKLLGHGQFGYTYVATDKA--NG--DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~--~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.++||.|.||.||+|.... .| --||||..+.+ ..+...+.|..|.-+|+.+ +|||||++
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d--------------~t~d~tekflqEa~iMrnf-dHphIikL 456 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD--------------CTPDDTEKFLQEASIMRNF-DHPHIIKL 456 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccC--------------CChhhHHHHHHHHHHHHhC-CCcchhhe
Confidence 346789999999999997643 23 35899988764 3345678999999999999 69999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+|+|.+.. .|||||+++-|.|..+|..+ ...++......+++||+.||.|||+.++|||||-..|||+.+ ...||
T Consensus 457 IGv~~e~P-~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS---p~CVK 531 (974)
T KOG4257|consen 457 IGVCVEQP-MWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS---PQCVK 531 (974)
T ss_pred eeeeeccc-eeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC---cceee
Confidence 99998654 89999999999999988544 467999999999999999999999999999999999999995 67899
Q ss_pred EEeeccccccCCCCCccccccC--ccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGS--AYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt--~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||+++.+.....+....|. .-|||||.++ ...+.++|||-|||.+||++. |..||.+-...+++-.+-++...
T Consensus 532 LaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl 611 (974)
T KOG4257|consen 532 LADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL 611 (974)
T ss_pred ecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC
Confidence 9999999998776665544443 4599999886 457999999999999999887 99999988777776666555432
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+..++.|+.+..|+.+||..+|.+||...++..
T Consensus 612 ---P~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 612 ---PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred ---CCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 223678999999999999999999999887643
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=315.42 Aligned_cols=271 Identities=21% Similarity=0.274 Sum_probs=191.8
Q ss_pred ccceeecccccccCCeEEEEEEEc----------------CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHH
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK----------------ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~----------------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 158 (574)
.++|.+.++||+|+||.||+|.+. ..++.||||.+.......+.....+ ........+....|
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e-~~~~~~~~e~~~vE 222 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKT-GTLAKGSAETGMVE 222 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhh-hhhhhcccchhHHH
Confidence 458999999999999999999752 3456899999865321111100000 00011122345567
Q ss_pred HHHHHHhcCCCC-----cceEEEEEEc--------CCEEEEEEeccCCCchHHHHHhhc---------------------
Q 008197 159 VKILQALAGHEN-----VVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKK--------------------- 204 (574)
Q Consensus 159 ~~il~~l~~hpn-----iv~~~~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~--------------------- 204 (574)
+.++.++. |.+ +++++++|.. .+..+|||||+++++|.+++....
T Consensus 223 ~~~l~~l~-~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 223 AYMCAKIK-RNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHhh-cccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 77888885 443 4667777643 356899999999999998875321
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccc--cccCccccc
Q 008197 205 -DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVA 281 (574)
Q Consensus 205 -~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~--~~gt~~y~a 281 (574)
...+++..++.++.|++.+|.|||+.+|+||||||+|||++ .++.+||+|||++........... ..+|+.|+|
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 11245678899999999999999999999999999999998 467899999999976544333222 245899999
Q ss_pred hHhhhcC---------------------C--CCCcchHhHHHHHHHHHhCCC-CCCCCChh-----------HHHHHHHh
Q 008197 282 PEVLKRK---------------------S--GPESDVWSIGVITYILLCGRR-PFWDKTED-----------GIFKEVLR 326 (574)
Q Consensus 282 PE~~~~~---------------------~--~~~~DvwSlG~il~elltg~~-Pf~~~~~~-----------~~~~~i~~ 326 (574)
||.+... + ..+.||||+|||+|+|++|.. ||.+.... ..+..+..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 9987432 1 134799999999999999886 66432111 11111112
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCC---CCCCCHHHHhcCccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDP---RARLTAAQALSHPWVRE 372 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp---~~Rps~~~~l~hp~~~~ 372 (574)
. .+....|...++.+.+|+.+||..+| .+|+|++++|+||||..
T Consensus 459 ~--~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 459 Q--KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred c--CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 2 23334567789999999999999866 68999999999999975
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-37 Score=304.71 Aligned_cols=258 Identities=23% Similarity=0.320 Sum_probs=209.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
......+.++||+|.||.|.++. ...+..||||.++... .......|.+|+++|.+|+ |||||.
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a--------------~~~~r~~F~kEIkiLsqLk-hPNIve 599 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDA--------------TKNARNDFLKEIKILSRLK-HPNIVE 599 (807)
T ss_pred chhheehhhhhcCcccceeEEEE-ecCceEEEEeecCccc--------------chhHHHHHHHHHHHHhccC-CCCeeE
Confidence 34567889999999999999997 3446899999998752 1234678999999999995 999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++|..++.+++|+||+++|+|-+++.+..-..+.......|+.||+.|++||.+.++|||||.+.|+|++ .++++
T Consensus 600 LvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~---~e~~i 676 (807)
T KOG1094|consen 600 LLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD---GEFTI 676 (807)
T ss_pred EEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec---CcccE
Confidence 999999999999999999999999999765433345566777999999999999999999999999999999 58999
Q ss_pred EEEeeccccccCCCCCc---cccccCccccchHh-hhcCCCCCcchHhHHHHHHHHHh--CCCCCCCCChhHHHHHHHhC
Q 008197 254 KATDFGLSDFIKPGKKF---QDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~-~~~~~~~~~DvwSlG~il~ellt--g~~Pf~~~~~~~~~~~i~~~ 327 (574)
||+|||+++.+..+..+ ...+-..+|||||. +.++.++++|||+||+++||+++ ...||...+...+..+...-
T Consensus 677 KiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~ 756 (807)
T KOG1094|consen 677 KIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEF 756 (807)
T ss_pred EecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhh
Confidence 99999999966544433 23456679999995 57889999999999999999765 88999888877776664332
Q ss_pred CCCCCC----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 328 KPDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 328 ~~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
...-.. ...+-++..+.+++-+||..+..+|||.+++ |-+|++
T Consensus 757 ~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l--h~~lq~ 803 (807)
T KOG1094|consen 757 FRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL--HLFLQE 803 (807)
T ss_pred cCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH--HHHHHH
Confidence 111111 1123467789999999999999999999998 445543
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=320.59 Aligned_cols=248 Identities=26% Similarity=0.404 Sum_probs=215.0
Q ss_pred ceeecccccccCCeEEEEEEEcCCC---CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
...|.+.||.|.||.|+.|+.+..| ..||||.++.. ..+.....|+.|..||.+. +||||++
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--------------ytekqrrdFL~EAsIMGQF-dHPNIIr 694 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--------------YTEKQRRDFLSEASIMGQF-DHPNIIR 694 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccC--------------ccHHHHhhhhhhhhhcccC-CCCcEEE
Confidence 3577889999999999999988776 47999999865 2345667899999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
|.++......+.||+|||++|+|..+|.. ..+.|+..+..-+++.|+.|++||-+.++|||||...|||+++ +-.+
T Consensus 695 LEGVVTks~PvMIiTEyMENGsLDsFLR~-~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs---nLvC 770 (996)
T KOG0196|consen 695 LEGVVTKSKPVMIITEYMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS---NLVC 770 (996)
T ss_pred EEEEEecCceeEEEhhhhhCCcHHHHHhh-cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc---ceEE
Confidence 99999999999999999999999887754 4577999999999999999999999999999999999999994 8899
Q ss_pred EEEeeccccccCCCCC--cccccc--CccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008197 254 KATDFGLSDFIKPGKK--FQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~--~~~~~g--t~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~ 327 (574)
|++|||+++.+.++.. +.+.-| ..+|.|||.+. .+.+.++||||+||++||.++ |..|||+.+.++++..|-.+
T Consensus 771 KVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g 850 (996)
T KOG0196|consen 771 KVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG 850 (996)
T ss_pred EeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhc
Confidence 9999999998755432 222222 35799999875 667999999999999999776 99999999999999999776
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. +.++..+.|..+.+|+..||++|-..||.+.+|+.
T Consensus 851 y---RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 851 Y---RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred c---CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 4 44444678899999999999999999999999865
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=310.16 Aligned_cols=256 Identities=25% Similarity=0.348 Sum_probs=217.0
Q ss_pred cceeecccccccCCeEEEEEEEcCC-C--CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKAN-G--DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~-~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+...+.++||+|.||.|++|.+... | ..||||.++.... ......|.+|+.+|.+|. |||++
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l--------------~~~mddflrEas~M~~L~-H~hli 174 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL--------------NAIMDDFLREASHMLKLQ-HPHLI 174 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc--------------chhHHHHHHHHHHHHhcc-Cccee
Confidence 3567789999999999999988653 3 4699999987632 125678999999999995 99999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++|++..+ ..+.+|||++++|+|++.|.......|.....-.|+.||+.|+.||-++++|||||-..|+|+.+ ...
T Consensus 175 RLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas---prt 250 (1039)
T KOG0199|consen 175 RLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS---PRT 250 (1039)
T ss_pred EEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc---cce
Confidence 99999988 66899999999999999998766778899999999999999999999999999999999999985 678
Q ss_pred eEEEeeccccccCCCCCcccc----ccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~----~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
|||+||||.+-+..+..+..+ .-...|+|||.++. ..+.++|||++||++|||++ |..||.+.....++++|-.
T Consensus 251 VKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~ 330 (1039)
T KOG0199|consen 251 VKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA 330 (1039)
T ss_pred eeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc
Confidence 999999999987766544322 23456999999975 57999999999999999998 9999999999999988874
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+. ..+.+ +..|+++.+++..||..+|.+|||+..|...-+..+.
T Consensus 331 ~e-rLpRP--k~csedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 331 GE-RLPRP--KYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred cc-cCCCC--CCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 33 23332 4578999999999999999999999999766665554
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=288.50 Aligned_cols=254 Identities=30% Similarity=0.515 Sum_probs=205.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|.-++.+|.|+- .|-.+-|..++++||+|++... + .......+..+|..++..+ +|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p--------f-----~n~~~akra~rel~l~~~v-~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP--------F-----QNQTHAKRAYRELKLMKCV-NHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc--------c-----ccCccchhhhhhhhhhhhh-cccceeee
Confidence 358999999999999 7778888999999999987543 1 1123456778999999999 69999999
Q ss_pred EEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 175 YNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 175 ~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+.+|... ..+|+||||+. .+|...+. -.+.-..+..+++|+++|++|||+.||+||||||+||++.
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~--- 152 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN--- 152 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec---
Confidence 9999654 35899999994 58888775 3467889999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.++.+||.|||+|+.....-..+.++.|..|+|||++.+ .+...+||||+||++.||++|...|.+.+.-..+.++...
T Consensus 153 ~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 153 SDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred chhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 488999999999987666555678899999999998765 4678899999999999999999999877654444443221
Q ss_pred ----------------------CC---------CCCCCCCCC-------CCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 328 ----------------------KP---------DFRRKPWPS-------ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 328 ----------------------~~---------~~~~~~~~~-------~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
.+ .++...|+. -+..+++++.+||..||++|.|++++|+|||
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY 312 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY 312 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence 11 011111211 1335889999999999999999999999999
Q ss_pred cc
Q 008197 370 VR 371 (574)
Q Consensus 370 ~~ 371 (574)
|+
T Consensus 313 ~~ 314 (369)
T KOG0665|consen 313 IK 314 (369)
T ss_pred ee
Confidence 97
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=283.37 Aligned_cols=242 Identities=44% Similarity=0.765 Sum_probs=202.4
Q ss_pred CCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCEEEEE
Q 008197 108 QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 187 (574)
Q Consensus 108 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~~~lv 187 (574)
+||.||+|.+..+|+.+|+|++..... ......+.+|+.+++.+ +|+||+++++.+......+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~ 65 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKI--------------KKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLV 65 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccc--------------ccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEE
Confidence 589999999988899999999876421 01156789999999999 699999999999999999999
Q ss_pred EeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCC
Q 008197 188 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267 (574)
Q Consensus 188 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~ 267 (574)
+||+++++|.+++... ..+++..+..++.+++.++.+||..+|+|+||+|+||+++. ++.++|+|||++......
T Consensus 66 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---~~~~~l~d~~~~~~~~~~ 140 (244)
T smart00220 66 MEYCDGGDLFDLLKKR--GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---DGHVKLADFGLARQLDPG 140 (244)
T ss_pred EeCCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---CCcEEEccccceeeeccc
Confidence 9999999999887443 33899999999999999999999999999999999999984 689999999999877655
Q ss_pred CCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhCCCCCCCCCCCCCCHHHHH
Q 008197 268 KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 345 (574)
Q Consensus 268 ~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 345 (574)
.......++..|+|||.+. ...+.++||||||+++|+|++|..||.. .........+....... ...+..++..+.+
T Consensus 141 ~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 219 (244)
T smart00220 141 GLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-PPPEWKISPEAKD 219 (244)
T ss_pred cccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-ccccccCCHHHHH
Confidence 4556678999999999886 4557899999999999999999999977 44444444443332222 2222227889999
Q ss_pred HHHHccccCCCCCCCHHHHhcCccc
Q 008197 346 FVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 346 li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
++.+||..+|.+||++.++++||||
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHccCCchhccCHHHHhhCCCC
Confidence 9999999999999999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=315.12 Aligned_cols=252 Identities=30% Similarity=0.498 Sum_probs=198.9
Q ss_pred eeecccccccCCeE-EEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 98 YTIGKLLGHGQFGY-TYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 98 y~~~~~lG~G~~g~-Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
|.-.+.+|.|+.|+ ||+|. ..|+.||||.+-.. ...-..+|+..|+.-..|||||++|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e------------------~~~~A~rEi~lL~eSD~H~NviRyyc 570 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEE------------------FFDFAQREIQLLQESDEHPNVIRYYC 570 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--eCCceehHHHHhhH------------------hHHHHHHHHHHHHhccCCCceEEEEe
Confidence 44456899999884 69996 67899999977543 34467899999999989999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhh-c-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--CCCC
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAK-K-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSS 252 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--~~~~ 252 (574)
.-.+....||+.|+|. .+|.+++... . .........+.++.|++.||.+||+.+||||||||.||||...+ ....
T Consensus 571 ~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~r 649 (903)
T KOG1027|consen 571 SEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLR 649 (903)
T ss_pred eccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCccee
Confidence 9999999999999995 5999888542 1 11112245688999999999999999999999999999998642 3457
Q ss_pred eEEEeeccccccCCCCC----ccccccCccccchHhhhcCC-CCCcchHhHHHHHHHHHhC-CCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~-~~~~DvwSlG~il~elltg-~~Pf~~~~~~~~~~~i~~ 326 (574)
++|+|||+++....+.. ..+..||.+|+|||++.... ..++||+|||||+|+.++| ..||.+.-. .-.+|+.
T Consensus 650 a~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~ 727 (903)
T KOG1027|consen 650 AKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILT 727 (903)
T ss_pred EEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhc
Confidence 99999999998765432 45678999999999997654 6789999999999998885 999955432 3345666
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+......-. +....++.+||.+||.++|..||+|.++|.||+|=..
T Consensus 728 ~~~~L~~L~-~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 728 GNYTLVHLE-PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred Cccceeeec-cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 654432211 1112289999999999999999999999999999653
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=281.88 Aligned_cols=255 Identities=30% Similarity=0.464 Sum_probs=202.4
Q ss_pred ecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 100 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
-.+.||.|+||.||.+.|..+|+.||+|++..- ++ .-...+.+.+|+.+|.-.+ |.|++..++..+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv--------fq-----~L~s~krvFre~kmLcfFk-HdNVLSaLDILQ 122 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV--------FQ-----NLASCKRVFREIKMLSSFR-HDNVLSLLDILQ 122 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchH--------HH-----HHHHHHHHHHHHHHHHhhc-cccHHHHHHhcC
Confidence 346799999999999999999999999988642 11 1235678999999999995 999999988876
Q ss_pred cCC-----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 180 DDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 180 ~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
... .+|+|+|++. .+|...+ .....++..+++-+++||+.||.|||+.+|.||||||.|+|+++ +..+|
T Consensus 123 Pph~dfFqEiYV~TELmQ-SDLHKII--VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS---NCvLK 196 (449)
T KOG0664|consen 123 PANPSFFQELYVLTELMQ-SDLHKII--VSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS---NCILK 196 (449)
T ss_pred CCCchHHHHHHHHHHHHH-hhhhhee--ccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc---CceEE
Confidence 543 4688889884 4665544 34578999999999999999999999999999999999999984 89999
Q ss_pred EEeeccccccCCCC--CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh----
Q 008197 255 ATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 326 (574)
Q Consensus 255 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~---- 326 (574)
|||||+|+.-.... ..+..+.|.+|+|||++.+ .|+.++||||+|||+.||+..+..|...++-+.+..|..
T Consensus 197 ICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGT 276 (449)
T KOG0664|consen 197 ICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGT 276 (449)
T ss_pred ecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCC
Confidence 99999998654332 3345678999999999875 579999999999999999999999987776555444422
Q ss_pred -------------------CCCCCCCCC--C-----CCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 327 -------------------NKPDFRRKP--W-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 327 -------------------~~~~~~~~~--~-----~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+....+... + ..-..+...++..+|..||.+|++..+++.|++..+..
T Consensus 277 Ps~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 277 PSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred CcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccc
Confidence 111111000 0 01223578899999999999999999999999987753
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=291.79 Aligned_cols=256 Identities=30% Similarity=0.513 Sum_probs=202.7
Q ss_pred cccceeecccccccCCeEEEEEEEcC---CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
+.+.|.++.+||.|+|+.||++.+.. ..+.||+|.+... .....+.+|+++|..+.++.|
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----------------s~p~ri~~El~~L~~~gG~~n 96 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----------------SSPSRILNELEMLYRLGGSDN 96 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----------------cCchHHHHHHHHHHHhccchh
Confidence 34568999999999999999999877 7889999988654 244678999999999999999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++.+++..++.+++|+||++..+..+++ ..++...++.+++.++.||.++|.+|||||||||+|+|++. ..
T Consensus 97 i~~~~~~~rnnd~v~ivlp~~~H~~f~~l~-----~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t 169 (418)
T KOG1167|consen 97 IIKLNGCFRNNDQVAIVLPYFEHDRFRDLY-----RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RT 169 (418)
T ss_pred hhcchhhhccCCeeEEEecccCccCHHHHH-----hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--cc
Confidence 999999999999999999999998877766 34778999999999999999999999999999999999986 56
Q ss_pred CCeEEEeeccccccC-----------------C--CC--------------------------CccccccCccccchHhh
Q 008197 251 SSLKATDFGLSDFIK-----------------P--GK--------------------------KFQDIVGSAYYVAPEVL 285 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~-----------------~--~~--------------------------~~~~~~gt~~y~aPE~~ 285 (574)
+.-.|+|||+|.... + +. ..-...||++|+|||++
T Consensus 170 ~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL 249 (418)
T KOG1167|consen 170 QRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVL 249 (418)
T ss_pred CCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHH
Confidence 677899999986210 0 00 00124799999999998
Q ss_pred hcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHH--------------HhCC-------------------C
Q 008197 286 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEV--------------LRNK-------------------P 329 (574)
Q Consensus 286 ~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i--------------~~~~-------------------~ 329 (574)
... .++++||||.|||+..+++++.||.....+ ..+..+ +.+. .
T Consensus 250 ~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~ 329 (418)
T KOG1167|consen 250 FRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFE 329 (418)
T ss_pred hhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchh
Confidence 654 488999999999999999999999543221 000000 0000 0
Q ss_pred CC-------------CCCCCC-CCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DF-------------RRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~-------------~~~~~~-~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.. ....|. ..+..+.+|+.+||+.||.+|+||+++|+||||.+.
T Consensus 330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 000111 234578999999999999999999999999999964
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=254.88 Aligned_cols=214 Identities=25% Similarity=0.332 Sum_probs=178.9
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
....+..||+|++|.|-+.++..+|...|+|.+.... ......++.+|+++..+...+|.+|.+|+
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--------------n~q~q~r~L~dldi~~r~~~CPf~V~FyG 112 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--------------NSQEQKRLLMDLDIIMRTVDCPFTVHFYG 112 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--------------ChHHHHHHHHhhhhhccCCCCCeEEEeeh
Confidence 3445677999999999999999999999999987541 23456678899999888778999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCCe
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~v 253 (574)
.+-.++.+||.||.|. -+|..+.. ..+++.+++..+..|+..++.||.|||++ .|||||+||+|||++ ..|.|
T Consensus 113 a~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn---~~GqV 188 (282)
T KOG0984|consen 113 ALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN---YDGQV 188 (282)
T ss_pred hhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc---cCCcE
Confidence 9999999999999995 35433221 13567899999999999999999999986 899999999999999 48999
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc-----CCCCCcchHhHHHHHHHHHhCCCCCCC-CChhHHHHHHHhC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~DvwSlG~il~elltg~~Pf~~-~~~~~~~~~i~~~ 327 (574)
|+||||.+..+.++-..+...|...|||||.+.. .|+-++||||||++++||.+++.||.. .++.+.+.++...
T Consensus 189 KiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 189 KICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred EEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 9999999988766555454678899999999864 457789999999999999999999965 4666777777765
Q ss_pred C
Q 008197 328 K 328 (574)
Q Consensus 328 ~ 328 (574)
.
T Consensus 269 p 269 (282)
T KOG0984|consen 269 P 269 (282)
T ss_pred C
Confidence 4
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=299.61 Aligned_cols=259 Identities=28% Similarity=0.459 Sum_probs=218.2
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|.++..+|.|+||.||+++++.++...|+|+++.... ....-++.|+-+++..+ |||||.
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~---------------dd~~~iqqei~~~~dc~-h~niva 76 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG---------------DDFSGIQQEIGMLRDCR-HPNIVA 76 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCC---------------ccccccccceeeeecCC-CcChHH
Confidence 44679999999999999999999999999999999976421 23445778999999994 999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++.|.....+||+||||.||+|.+.. .-.+++++.++.++.+..+.||+|||+.|-+|||||-.|||+. +.+.+
T Consensus 77 y~gsylr~dklwicMEycgggslQdiy--~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDv 151 (829)
T KOG0576|consen 77 YFGSYLRRDKLWICMEYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDV 151 (829)
T ss_pred HHhhhhhhcCcEEEEEecCCCccccee--eecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCce
Confidence 999999999999999999999998854 4568899999999999999999999999999999999999998 58899
Q ss_pred EEEeeccccccCCC-CCccccccCccccchHhh----hcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 254 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 254 kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~----~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
||.|||.+..+... .....+.|||+|||||+. .+.|...+|||++|+...|+---.+|-.+.-+...+....+..
T Consensus 152 klaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~ 231 (829)
T KOG0576|consen 152 KLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSG 231 (829)
T ss_pred eecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccC
Confidence 99999998766432 234568999999999985 4678999999999999999999888987776655554444333
Q ss_pred CCCCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 329 PDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+..+. ..-..+++.+-+|++.+|..+|++|||++.+|.|||....
T Consensus 232 ~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 232 FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 32221 1123467889999999999999999999999999998764
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=289.63 Aligned_cols=205 Identities=35% Similarity=0.636 Sum_probs=177.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcceE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVVKF 174 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv~~ 174 (574)
.|..++.+|.|+||+|++|.++.+...|+||.|.+.+++... ...|. ..-.+..||.||..|. .|+||+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~Dt-WvrDr------kLGtVp~EIqIla~l~~~sH~NIlKl 634 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDT-WVRDR------KLGTVPSEIQILATLNKHSHENILKL 634 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhh-hhccc------ccCccchhHHHHHHhhhcCccchhhh
Confidence 499999999999999999999999999999999988654331 11111 1223568999999993 29999999
Q ss_pred EEEEEcCCEEEEEEecc-CCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 175 YNAFEDDNYVYIAMELC-EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++|++++++||+||-. +|.+|++++.. ...+++.++..|++|++.|+++||+.||||||||-+|+.+++ +|.+
T Consensus 635 LdfFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~---~g~~ 709 (772)
T KOG1152|consen 635 LDFFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDS---NGFV 709 (772)
T ss_pred hheeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccCceecccccccEEEec---CCeE
Confidence 99999999999999986 46689998844 467999999999999999999999999999999999999994 8999
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWD 314 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~ 314 (574)
||+|||.|....++. +..++||..|.|||++.+.. +.+-|||+||++||-++....||+.
T Consensus 710 klidfgsaa~~ksgp-fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGP-FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EEeeccchhhhcCCC-cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999998876544 57889999999999998764 7889999999999999999999853
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=273.14 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=192.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHh-cCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHE 169 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~~hp 169 (574)
...+.++..+.+.||+|.||.||+|. ..|..||||++... ....+.+|.+|.+.+ ..|+
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~sr------------------dE~SWfrEtEIYqTvmLRHE 265 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSSR------------------DERSWFRETEIYQTVMLRHE 265 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecc--ccCCceEEEEeccc------------------chhhhhhHHHHHHHHHhccc
Confidence 34567789999999999999999996 56889999998654 345688899888762 2699
Q ss_pred CcceEEEEEEcC----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeecC
Q 008197 170 NVVKFYNAFEDD----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDM 237 (574)
Q Consensus 170 niv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~iiHrDl 237 (574)
||+.+++.-..+ ..+|||++|.+.|+|+|+|.+ ..++......++..++.||.+||.. .|.||||
T Consensus 266 NILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDl 342 (513)
T KOG2052|consen 266 NILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDL 342 (513)
T ss_pred hhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccc
Confidence 999999876543 369999999999999999954 5789999999999999999999963 4999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCC-----CccccccCccccchHhhhcCC-------CCCcchHhHHHHHHHH
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYIL 305 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DvwSlG~il~el 305 (574)
|..|||+. .++.+-|+|+|||....... ..+..+||.+|||||++.... ...+||||||.|+||+
T Consensus 343 KSKNILVK---kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEi 419 (513)
T KOG2052|consen 343 KSKNILVK---KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEI 419 (513)
T ss_pred ccccEEEc---cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHH
Confidence 99999998 58999999999997654432 235679999999999997543 3458999999999999
Q ss_pred HhC----------CCCCCCCC----hhHHHHHHHhCCC--CCCCCCCCCCC--HHHHHHHHHccccCCCCCCCHHHH
Q 008197 306 LCG----------RRPFWDKT----EDGIFKEVLRNKP--DFRRKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQA 364 (574)
Q Consensus 306 ltg----------~~Pf~~~~----~~~~~~~i~~~~~--~~~~~~~~~~~--~~~~~li~~~L~~dp~~Rps~~~~ 364 (574)
+.. .+||.+.. ..+...+++.-.. +..+..|...+ ..+..+++.||..||.-|.||-.+
T Consensus 420 arRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 420 ARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred HHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 852 57886542 2233444433221 12223343322 235688999999999999998665
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=327.24 Aligned_cols=240 Identities=19% Similarity=0.249 Sum_probs=182.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|.....||+|+||.||+|++..+|..||||.+.... .....|+.+++++ +|||||+++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------------~~~~~~~~~l~~l-~HpnIv~~~ 749 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-------------------SIPSSEIADMGKL-QHPNIVKLI 749 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-------------------cccHHHHHHHhhC-CCCCcceEE
Confidence 35667788999999999999998999999999886431 0113468889999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCEeecCCCCcEEEccCCCCCC
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++|.+.+..|+||||+++|+|.+++. .+++..+..++.||+.||.||| +.+|+||||||+||+++. ++.
T Consensus 750 ~~~~~~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~---~~~ 821 (968)
T PLN00113 750 GLCRSEKGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG---KDE 821 (968)
T ss_pred EEEEcCCCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC---CCc
Confidence 99999999999999999999999882 4889999999999999999999 669999999999999984 555
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh--hHHHHHH--HhC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEV--LRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~--~~~~~~i--~~~ 327 (574)
.++. ||.+...... ....||+.|+|||++.+ .++.++|||||||++|||+||+.||..... ..+.... ...
T Consensus 822 ~~~~-~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 897 (968)
T PLN00113 822 PHLR-LSLPGLLCTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS 897 (968)
T ss_pred eEEE-eccccccccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC
Confidence 6654 6665433211 23478999999998865 468899999999999999999999853211 1111111 000
Q ss_pred CCC---CCCC----CCC---CCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 328 KPD---FRRK----PWP---SISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 328 ~~~---~~~~----~~~---~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
... +..+ ..+ ....++.+++.+||..+|++|||+.++++.
T Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 898 DCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred ccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000 0000 000 111246789999999999999999999763
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=275.85 Aligned_cols=241 Identities=27% Similarity=0.395 Sum_probs=188.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-CCCCcceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-GHENVVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-~hpniv~~ 174 (574)
....+.++||+|.||.||+|. .+++.||||++... ..+.+.+|-+|..... .|+||+++
T Consensus 210 ~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~------------------~kqs~~~Ek~Iy~lp~m~h~nIl~F 269 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQ------------------EKQSFQNEKNIYSLPGMKHENILQF 269 (534)
T ss_pred CchhhHHHhhcCccceeehhh--ccCceeEEEecCHH------------------HHHHHHhHHHHHhccCccchhHHHh
Confidence 346788999999999999996 56799999998653 4567888888876531 59999999
Q ss_pred EEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCEeecCCCCc
Q 008197 175 YNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKPEN 241 (574)
Q Consensus 175 ~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---------~iiHrDlkp~N 241 (574)
+++-.-.. .++||++|.+.|+|.++|.. ..+++....+++..+++||.|||+- .|+|||||..|
T Consensus 270 i~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~---ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkN 346 (534)
T KOG3653|consen 270 IGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA---NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKN 346 (534)
T ss_pred hchhccCCccccceeEEeeeccCCcHHHHHHh---ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccc
Confidence 99876544 89999999999999999943 5689999999999999999999973 59999999999
Q ss_pred EEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhcCCC-------CCcchHhHHHHHHHHHhCCC-
Q 008197 242 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-------PESDVWSIGVITYILLCGRR- 310 (574)
Q Consensus 242 ill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-------~~~DvwSlG~il~elltg~~- 310 (574)
||+. .+.++-|+|||+|..+.++.. ....+||.+|||||++.+..+ .+.||||+|.|||||++...
T Consensus 347 VLvK---~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~ 423 (534)
T KOG3653|consen 347 VLVK---NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTD 423 (534)
T ss_pred eEEc---cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9998 489999999999987764432 334799999999999987542 24799999999999998533
Q ss_pred -----------CCC-----CCChhHHHHHHHhCCCCC-CCCCCCC--CCHHHHHHHHHccccCCCCCCCHH
Q 008197 311 -----------PFW-----DKTEDGIFKEVLRNKPDF-RRKPWPS--ISNSAKDFVKKLLVKDPRARLTAA 362 (574)
Q Consensus 311 -----------Pf~-----~~~~~~~~~~i~~~~~~~-~~~~~~~--~~~~~~~li~~~L~~dp~~Rps~~ 362 (574)
||. +.+.+++...++..+... .+..|.. -...+++.+..||..||+.|.||.
T Consensus 424 ~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 424 ADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred ccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 231 223344555555544221 1122321 124578999999999999999975
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=260.29 Aligned_cols=257 Identities=27% Similarity=0.420 Sum_probs=202.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++.+.|.|.+.||+|-||++-++.|+.++..+|+|.+++.. .....|.+|...--.|..|.||+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----------------tt~~dF~rEfhY~~~Ls~H~hIi 84 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----------------TTQADFVREFHYSFFLSPHQHII 84 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----------------hhHHHHHHHhccceeeccchhhh
Confidence 35678999999999999999999999999999999998752 35678899998877788899999
Q ss_pred eEEE-EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 173 KFYN-AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 173 ~~~~-~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
..|+ .|++.+.+++++||++-|+|.+.+. ...+.+...+.++.|+++|+.|+|+.++||||||.+||||-.. +..
T Consensus 85 ~tY~vaFqt~d~YvF~qE~aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~ 160 (378)
T KOG1345|consen 85 DTYEVAFQTSDAYVFVQEFAPRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFY 160 (378)
T ss_pred HHHHHHhhcCceEEEeeccCccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-Ccc
Confidence 9887 4788889999999999999988762 3568899999999999999999999999999999999999754 355
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc----CC--CCCcchHhHHHHHHHHHhCCCCCCCCChh-H---HH
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KS--GPESDVWSIGVITYILLCGRRPFWDKTED-G---IF 321 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~-~---~~ 321 (574)
.|||||||+++.....-. ..--+..|.|||++.. .+ .+.+|||.||+|+|.++||++||...... . .+
T Consensus 161 rvKlcDFG~t~k~g~tV~--~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~ 238 (378)
T KOG1345|consen 161 RVKLCDFGLTRKVGTTVK--YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEW 238 (378)
T ss_pred EEEeeecccccccCceeh--hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHH
Confidence 999999999876543221 2233456999997643 22 67789999999999999999999643221 1 22
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCC---CCHHHHhcCcccc
Q 008197 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVR 371 (574)
Q Consensus 322 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R---ps~~~~l~hp~~~ 371 (574)
.+.......-.+..+..+++.+..+.++-|..+|++| .+++......|..
T Consensus 239 ~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 239 EQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE 291 (378)
T ss_pred HHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence 2233333222333445688999999999999999999 5555555556644
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=294.46 Aligned_cols=250 Identities=26% Similarity=0.387 Sum_probs=203.0
Q ss_pred ceeecccccccCCeEEEEEEEcC-------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
...+.+.||.|+||.|++|.-.. ....||||.++... .....+.+..|+.+|+.+..||
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--------------~~~~~~~~~~El~~m~~~g~H~ 362 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--------------SSSEKKDLMSELNVLKELGKHP 362 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--------------CcHHHHHHHHHHHHHHHhcCCc
Confidence 34567799999999999996421 14579999987652 2245678999999999998899
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------------D--SRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------~--~~l~~~~~~~i~~qi~~~l~~LH~~~iiHr 235 (574)
||+.+++++...+.+++|+|||..|+|.+++...+ . ..++......++.||+.|++||++.++|||
T Consensus 363 niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHR 442 (609)
T KOG0200|consen 363 NIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHR 442 (609)
T ss_pred chhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccch
Confidence 99999999999999999999999999999996554 0 138899999999999999999999999999
Q ss_pred cCCCCcEEEccCCCCCCeEEEeeccccccCCCCCcc--ccccCc--cccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSA--YYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 236 Dlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~--~~~gt~--~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
||-..|||+. .+..+||+|||+|+.......+. ...|+. .|||||.+.. .++.++||||+||+|||+++ |.
T Consensus 443 DLAaRNVLi~---~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~ 519 (609)
T KOG0200|consen 443 DLAARNVLIT---KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGG 519 (609)
T ss_pred hhhhhhEEec---CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCC
Confidence 9999999998 47899999999999765444332 122323 4999998875 57999999999999999999 99
Q ss_pred CCCCCCC-hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 310 RPFWDKT-EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 310 ~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.||.+.. ..+++..+..+.. ...+ ...++++.++++.||+.+|++||+..++.+
T Consensus 520 ~PYp~~~~~~~l~~~l~~G~r-~~~P--~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 520 TPYPGIPPTEELLEFLKEGNR-MEQP--EHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred CCCCCCCcHHHHHHHHhcCCC-CCCC--CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9998855 4555554444432 2222 346899999999999999999999998854
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-32 Score=279.89 Aligned_cols=246 Identities=25% Similarity=0.333 Sum_probs=202.9
Q ss_pred eeecccccccCCeEEEEEEEcCCC----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
.+..++||.|+||+||+|.+--.| .+||||++.... ......++..|+-+|.+| +|||+++
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--------------~~~~s~e~LdeAl~masl-dHpnl~R 762 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--------------SPKASIELLDEALRMASL-DHPNLLR 762 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--------------CchhhHHHHHHHHHHhcC-CCchHHH
Confidence 455778999999999999885555 368999886542 233456789999999999 6999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.... +.||++|+++|+|.+++... ...+..+....|.+||++|+.|||.+++|||||-..|||+.+ -..|
T Consensus 763 LLgvc~~s~-~qlvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks---P~hv 837 (1177)
T KOG1025|consen 763 LLGVCMLST-LQLVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS---PNHV 837 (1177)
T ss_pred Hhhhcccch-HHHHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC---CCeE
Confidence 999998766 89999999999999998654 467889999999999999999999999999999999999984 6789
Q ss_pred EEEeeccccccCCCCC-ccc--cccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008197 254 KATDFGLSDFIKPGKK-FQD--IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~-~~~--~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~ 328 (574)
||.|||+|+....... +.. ..-.+.|||=|.+. ..++.++|||||||++||++| |..|+.+....++...+-.+.
T Consensus 838 kitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge 917 (1177)
T KOG1025|consen 838 KITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE 917 (1177)
T ss_pred EEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc
Confidence 9999999998765432 222 22345688888765 567999999999999999998 999999988877766665554
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. ...+ |..+.++.-++.+||..|+..||+++++..
T Consensus 918 R-LsqP--piCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 918 R-LSQP--PICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred c-CCCC--CCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 3 3332 557888999999999999999999988743
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=237.90 Aligned_cols=212 Identities=42% Similarity=0.743 Sum_probs=182.8
Q ss_pred ccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCCE
Q 008197 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183 (574)
Q Consensus 104 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~~ 183 (574)
||.|++|.||++.+..+|+.+++|++..... ....+.+.+|+.+++.+. |++|+++++++.....
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--------------~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~ 65 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS--------------SSLLEELLREIEILKKLN-HPNIVKLYGVFEDENH 65 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccc--------------hhHHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCe
Confidence 6899999999999888899999999876521 003467899999999995 9999999999999999
Q ss_pred EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 184 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
.++++||+.|++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ..+.++|+|||.+..
T Consensus 66 ~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--~~~~~~l~d~~~~~~ 142 (215)
T cd00180 66 LYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGLSKL 142 (215)
T ss_pred EEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--CCCcEEEecCCceEE
Confidence 999999999999998874322 46899999999999999999999999999999999999983 157899999999976
Q ss_pred cCCCC-CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCC
Q 008197 264 IKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340 (574)
Q Consensus 264 ~~~~~-~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 340 (574)
..... ......++..|++||.+.. ..+.+.|+|++|+++++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------- 187 (215)
T cd00180 143 LTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------- 187 (215)
T ss_pred ccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------
Confidence 64432 1334568889999999876 557889999999999999
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 341 NSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 341 ~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
..+.+++.+|+..+|.+||++.++++|+
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 5678999999999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-29 Score=237.15 Aligned_cols=211 Identities=41% Similarity=0.687 Sum_probs=176.8
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|.+.+.||.|++|.||+|.+..+++.+|||.+...... .....+.+|+..++.+ +|+|+++++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--------------~~~~~~~~e~~~~~~~-~~~~i~~~~~~ 65 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--------------KQREEFLREIRILKKL-KHPNIVKLYGV 65 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--------------HHHHHHHHHHHHHHhC-CCCChhhheee
Confidence 56778999999999999999888999999998764210 1356788999999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+......++++||+++++|.+.+... .. +++..+..++.+++.++.+||..+++|+||+|.||+++. ++.++|+
T Consensus 66 ~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~---~~~~~l~ 140 (225)
T smart00221 66 FEDPEPLYLVMEYCEGGDLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM---DGLVKLA 140 (225)
T ss_pred eecCCceEEEEeccCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEe
Confidence 99999999999999999999987543 33 899999999999999999999999999999999999984 5899999
Q ss_pred eeccccccCCCC--CccccccCccccchHhhh-c-CCCCCcchHhHHHHHHHHHhCCCCCCC-CChh-HHHHHHHhCC
Q 008197 257 DFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWD-KTED-GIFKEVLRNK 328 (574)
Q Consensus 257 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~-~~~~~~DvwSlG~il~elltg~~Pf~~-~~~~-~~~~~i~~~~ 328 (574)
|||++....... ......++..|++||.+. . .++.++||||||+++++|++|+.||.. .... .+...+..+.
T Consensus 141 d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 141 DFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred eCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 999998765442 334567889999999873 2 346789999999999999999999977 3333 4555555543
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-30 Score=294.67 Aligned_cols=198 Identities=21% Similarity=0.262 Sum_probs=147.4
Q ss_pred CCcceEEEEE-------EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCc
Q 008197 169 ENVVKFYNAF-------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 241 (574)
Q Consensus 169 pniv~~~~~~-------~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~N 241 (574)
+||+.++++| .....+++++||+ +++|.+++.. ....+++..+..+++||+.||.|||++|||||||||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~N 110 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSC 110 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchh
Confidence 6788888877 2334678889987 6699998843 24569999999999999999999999999999999999
Q ss_pred EEEccC----------------CCCCCeEEEeeccccccCCC-----------------CCccccccCccccchHhhhc-
Q 008197 242 FLFKSA----------------KEDSSLKATDFGLSDFIKPG-----------------KKFQDIVGSAYYVAPEVLKR- 287 (574)
Q Consensus 242 ill~~~----------------~~~~~vkl~DFG~a~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~- 287 (574)
|||+.. +.++.+||+|||+++..... ......+||++|||||++.+
T Consensus 111 iLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~ 190 (793)
T PLN00181 111 FVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGS 190 (793)
T ss_pred EEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccC
Confidence 999631 23456788888887642110 00112468999999998764
Q ss_pred CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 288 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.++.++|||||||+||||++|.+|+.... .....+..... +. .+....+...+++.+||.++|.+||++.++|+|
T Consensus 191 ~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 191 SSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PP-QILLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Ch-hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 56899999999999999999999875322 12222222111 11 111123557789999999999999999999999
Q ss_pred cccccc
Q 008197 368 PWVREG 373 (574)
Q Consensus 368 p~~~~~ 373 (574)
|||.+.
T Consensus 266 ~~~~~~ 271 (793)
T PLN00181 266 EFINEP 271 (793)
T ss_pred hhhhhh
Confidence 999864
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=230.81 Aligned_cols=250 Identities=20% Similarity=0.241 Sum_probs=201.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCC-----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG-----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~-----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.|+++..++-+|.||.||.|.++... +.|.+|.++.. ..+.....+..|.-.+..+. |||
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--------------AS~iQv~~~L~es~lly~~s-H~n 348 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--------------ASQIQVNLLLQESMLLYGAS-HPN 348 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--------------ccHHHHHHHHHHHHHHhcCc-CCC
Confidence 46788889999999999999776433 34556655432 33456677888988888885 999
Q ss_pred cceEEEEEE-cCCEEEEEEeccCCCchHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 171 VVKFYNAFE-DDNYVYIAMELCEGGELLDRILAK------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 171 iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
+..+.+++. +....++++.+..-|+|..++..- ..+.++..+...++.|++.|+.|||++||||.||-..|++
T Consensus 349 ll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 349 LLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCV 428 (563)
T ss_pred ccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcce
Confidence 999999875 456788999999889999888522 1245778888999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCCCCcc---ccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChh
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTED 318 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~ 318 (574)
|+ +.-.|||+|=.+++..-+.+... ..--...||+||.+. ..++.++|||||||++|||+| |+.||..-++.
T Consensus 429 Id---d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 429 ID---DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred eh---hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 99 57899999999998765543221 112234699999875 568999999999999999999 99999888888
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
++...+..+..- ...-+.|+++..++.-||...|++||+.+|+..
T Consensus 506 Em~~ylkdGyRl---aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 506 EMEHYLKDGYRL---AQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHhcccee---cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 888877766432 222468899999999999999999999998753
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=233.05 Aligned_cols=255 Identities=23% Similarity=0.292 Sum_probs=194.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCC-CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc---CCCCcc
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA---GHENVV 172 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---~hpniv 172 (574)
+|.+.+.||+|+||.||.|.+..++ ..+|+|....... .....+..|+.++..+. +-++++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~---------------~~~~~l~~E~~vl~~l~~~~~~~~~~ 83 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG---------------SKPSVLKIEIQVLKKLEKKNGPSHFP 83 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc---------------CCCccchhHHHHHHHHhhhcCCCCCC
Confidence 7999999999999999999987764 5788887654311 11115778999999885 236999
Q ss_pred eEEEEE-EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--C
Q 008197 173 KFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--E 249 (574)
Q Consensus 173 ~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--~ 249 (574)
.+++.+ ..+...||||+.+ |.+|.+.......+.++..++..++.|++.+|++||+.|++||||||+|++++... .
T Consensus 84 ~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~ 162 (322)
T KOG1164|consen 84 KLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSE 162 (322)
T ss_pred EEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcc
Confidence 999999 5888999999998 88999876555567899999999999999999999999999999999999998632 1
Q ss_pred CCCeEEEeeccccccC---CCC-------C-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCCh
Q 008197 250 DSSLKATDFGLSDFIK---PGK-------K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE 317 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~---~~~-------~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~ 317 (574)
...+.|+|||+|+... ... . .....||..|.++.+..+. .+++.|+||++.++.+++.|..||.....
T Consensus 163 ~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 163 VRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred cceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 2579999999998321 111 1 1235699999999988765 58999999999999999999999966554
Q ss_pred hHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 318 DGIFKEVLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
......+.......... .....+.++.++...+-..+...+|....+...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 243 TDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred cchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 33333333222222211 223345677777777777888888887776543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-29 Score=265.54 Aligned_cols=263 Identities=26% Similarity=0.403 Sum_probs=198.7
Q ss_pred cce-eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 96 RRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 96 ~~y-~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..| ....++|.|++|.|+.+........++.|.+... .. . ..........+..|+.+-..| .|||++..
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~----~----~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~ 386 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK----P----TESERKYNYNITSEFCIGSSL-SHPNIIET 386 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcc-cC----C----cccHHHHhhhhhhheeecccc-cCCchhhh
Confidence 345 4567899999999998887777777777765421 00 0 000111222367788888888 59999888
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+..+.+....+-+||||++ +|+..+... ..++...+-.++.|++.||.|+|..||.||||||+|+++. .++.+|
T Consensus 387 l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lk 460 (601)
T KOG0590|consen 387 LDIVQEIDGILQSMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILK 460 (601)
T ss_pred HHHHhhcccchhhhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceE
Confidence 8877766666666999999 999988443 5789999999999999999999999999999999999999 478999
Q ss_pred EEeeccccccCCC-----CCccccccCccccchHhhhcC-C-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHH-HHHHh
Q 008197 255 ATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF-KEVLR 326 (574)
Q Consensus 255 l~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~-~~i~~ 326 (574)
|+|||.+...... ......+|+..|+|||++.+. | ....||||.|++++.|++|+.||......... .....
T Consensus 461 i~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~ 540 (601)
T KOG0590|consen 461 IIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY 540 (601)
T ss_pred EeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc
Confidence 9999998765322 234578999999999998765 4 45689999999999999999999654332221 11100
Q ss_pred -C---CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 327 -N---KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 327 -~---~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
. ...-+...|..++...+.+|.+||+++|.+|.|+.+|++.+||++..
T Consensus 541 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 541 SDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred ccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 0 01112223456788899999999999999999999999999999764
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=211.51 Aligned_cols=248 Identities=20% Similarity=0.304 Sum_probs=198.7
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
...|+++++||.|+||.+|+|....+|..||||+=... ....++..|..+.+.|++-+.|+.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-----------------a~hpqL~yEskvY~iL~~g~GiP~i 76 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-----------------AKHPQLLYESKVYRILQGGVGIPHI 76 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-----------------CCCcchhHHHHHHHHhccCCCCchh
Confidence 45799999999999999999999999999999975443 2234578899999999888999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
..++.+..+-.+||+++ |.+|.+.+ .-....++..++..++-|++.-++|+|.+++|||||||+|+|++-......+.
T Consensus 77 ~~y~~e~~ynvlVMdLL-GPsLEdLf-nfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~ 154 (341)
T KOG1163|consen 77 RHYGTEKDYNVLVMDLL-GPSLEDLF-NFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLY 154 (341)
T ss_pred hhhccccccceeeeecc-CccHHHHH-HHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEE
Confidence 99999999999999998 88887755 33457899999999999999999999999999999999999998666677899
Q ss_pred EEeeccccccCCCC--------CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh---hHHHH
Q 008197 255 ATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFK 322 (574)
Q Consensus 255 l~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~---~~~~~ 322 (574)
|+|||+|+...+.. .-....||.+|.+-....+ ..+..-|+-|+|.+|..+.-|..||.+... ...++
T Consensus 155 LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE 234 (341)
T KOG1163|consen 155 LIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE 234 (341)
T ss_pred EEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH
Confidence 99999998754321 2235689999999887665 347889999999999999999999987643 34556
Q ss_pred HHHhCCCCCCCC-CCCCCCHHHHHHHHHccccCCCCCCCH
Q 008197 323 EVLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRARLTA 361 (574)
Q Consensus 323 ~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rps~ 361 (574)
+|...+...+.. ....+|.++.-.+.-|-..-=.+-|..
T Consensus 235 kI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 235 KISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred HHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 666655443322 245677887777776655444444543
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=218.30 Aligned_cols=210 Identities=22% Similarity=0.430 Sum_probs=177.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
-.|+|+++||+|+||+++.|.+..++++||||.=... ...-++..|.+..+.|.+.++|+.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----------------S~APQLrdEYr~YKlL~g~~GIP~vY 90 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----------------SEAPQLRDEYRTYKLLGGTEGIPQVY 90 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-----------------CCcchHHHHHHHHHHHcCCCCCCcee
Confidence 3699999999999999999999999999999964432 23456889999999998899999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--CCCCe
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSL 253 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--~~~~v 253 (574)
-+...+-+-.||+|++ |.+|.|.+ ...+.+|+..++..++.|++.-++|+|++.+|+|||||+|+||+.++ ....|
T Consensus 91 YFGqeG~~NiLVidLL-GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~I 168 (449)
T KOG1165|consen 91 YFGQEGKYNILVIDLL-GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVI 168 (449)
T ss_pred eeccccchhhhhhhhh-CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceE
Confidence 9999999999999998 88887754 55678899999999999999999999999999999999999998532 34578
Q ss_pred EEEeeccccccCCC--------CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCCh---hHHH
Q 008197 254 KATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE---DGIF 321 (574)
Q Consensus 254 kl~DFG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~---~~~~ 321 (574)
.|+|||+|+.+... .......||.+||+-....+. .+.+-|+-|||-++++.|-|.+||.+... .+.+
T Consensus 169 hiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kY 248 (449)
T KOG1165|consen 169 HIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKY 248 (449)
T ss_pred EEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHH
Confidence 99999999876533 234467899999998765554 48889999999999999999999977543 3444
Q ss_pred HHH
Q 008197 322 KEV 324 (574)
Q Consensus 322 ~~i 324 (574)
++|
T Consensus 249 eKI 251 (449)
T KOG1165|consen 249 EKI 251 (449)
T ss_pred HHh
Confidence 444
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-27 Score=215.67 Aligned_cols=163 Identities=26% Similarity=0.332 Sum_probs=127.5
Q ss_pred CchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCcccc
Q 008197 194 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273 (574)
Q Consensus 194 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~ 273 (574)
|+|.+++.. ...++++..++.++.||+.||.|||+++ ||+|||++ .++.+|+ ||++....... .
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~ 64 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----S 64 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----C
Confidence 688887743 2457999999999999999999999999 99999998 4788898 99998764322 2
Q ss_pred ccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh-hHHHHHHHhCCCCCCC---CCCCCCCH--HHHHH
Q 008197 274 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRR---KPWPSISN--SAKDF 346 (574)
Q Consensus 274 ~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~~~~~~---~~~~~~~~--~~~~l 346 (574)
.||+.|+|||++.+ .++.++|||||||++|||++|+.||..... ...+..+......... .....++. .+.++
T Consensus 65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (176)
T smart00750 65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF 144 (176)
T ss_pred CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence 68999999999865 468899999999999999999999976543 2333344333222111 11112333 68999
Q ss_pred HHHccccCCCCCCCHHHHhcCccccc
Q 008197 347 VKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 347 i~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
|.+||..+|.+||++.+++.|+|+..
T Consensus 145 i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 145 MRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHhcccccccCHHHHHHHHHHHH
Confidence 99999999999999999999999864
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-25 Score=221.51 Aligned_cols=258 Identities=36% Similarity=0.577 Sum_probs=204.4
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC-CcceEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE-NVVKFYN 176 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp-niv~~~~ 176 (574)
|.+.+.||.|+||.||++.+. ..+|+|.+..... ........+.+|+.++..+. |+ +|+.+++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~------------~~~~~~~~~~~e~~~~~~~~-~~~~i~~~~~ 65 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLE------------SKSKEVERFLREIQILASLN-HPPNIVKLYD 65 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhc------------cchhHHHHHHHHHHHHHHcc-CCcceeeEEE
Confidence 778899999999999999876 7899999876521 11124667899999999996 66 8999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC-CeE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLK 254 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~-~vk 254 (574)
.+......+++++|+.++++.+.+..... ..++...+..++.|++.++.|+|..+++|||+||+||+++. .. .++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~---~~~~~~ 142 (384)
T COG0515 66 FFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR---DGRVVK 142 (384)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC---CCCeEE
Confidence 99888889999999999999855532211 26899999999999999999999999999999999999984 44 699
Q ss_pred EEeeccccccCCCC-------CccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCCh----hH
Q 008197 255 ATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE----DG 319 (574)
Q Consensus 255 l~DFG~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~----~~ 319 (574)
++|||++....... .....+||..|+|||.+.+ ......|+||+|++++++++|..||..... ..
T Consensus 143 l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~ 222 (384)
T COG0515 143 LIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQ 222 (384)
T ss_pred EeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHH
Confidence 99999997554332 3467799999999999875 457889999999999999999999876653 34
Q ss_pred HHHHHHhCCCC-CCCCCCCCC----CHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 320 IFKEVLRNKPD-FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 320 ~~~~i~~~~~~-~~~~~~~~~----~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
....+...... ......... ...+.+++.+++..+|..|.+..+...++|.....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 282 (384)
T COG0515 223 TLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK 282 (384)
T ss_pred HHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence 44444443322 222111111 25789999999999999999999999987766543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-26 Score=228.48 Aligned_cols=176 Identities=20% Similarity=0.271 Sum_probs=132.8
Q ss_pred cccceeecccccccCCeEEEEEEEcC-CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+...|.+.+.||+|+||+||+|+++. +++.||||++..... ........+.+.+|+.+|+.| +|+|++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~~~~~~E~~iL~~L-~h~~iv 84 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVP----------WWSKPLARHLAAREIRALKTV-RGIGVV 84 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccc----------ccccHHHHHHHHHHHHHHHhc-cCCCCC
Confidence 45689999999999999999998876 678889998653200 000112345689999999999 499988
Q ss_pred e-EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC-CCCcEEEccCCCC
Q 008197 173 K-FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKED 250 (574)
Q Consensus 173 ~-~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDl-kp~Nill~~~~~~ 250 (574)
. ++++ +..|||||||+|++|.. + .. .. ...++.|++.+|.|||++||+|||| ||+|||++ .+
T Consensus 85 ~~l~~~----~~~~LVmE~~~G~~L~~-~--~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~ 148 (365)
T PRK09188 85 PQLLAT----GKDGLVRGWTEGVPLHL-A--RP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PD 148 (365)
T ss_pred cEEEEc----CCcEEEEEccCCCCHHH-h--Cc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CC
Confidence 5 5442 45899999999999862 2 11 11 1467899999999999999999999 99999997 36
Q ss_pred CCeEEEeeccccccCCCC---------CccccccCccccchHhhhcCC-------CCCcchH
Q 008197 251 SSLKATDFGLSDFIKPGK---------KFQDIVGSAYYVAPEVLKRKS-------GPESDVW 296 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~-------~~~~Dvw 296 (574)
+.+||+|||+|+...... .....++++.|+|||++.... +...|-|
T Consensus 149 ~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 149 GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 789999999998654322 123567899999999986432 3446766
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-27 Score=242.16 Aligned_cols=241 Identities=28% Similarity=0.492 Sum_probs=203.5
Q ss_pred cccccCCeEEEEEEE---cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 103 LLGHGQFGYTYVATD---KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
.+|+|+||.|++++. ...|..+|+|+..+.....+ .......|..++..+.+||.+|++.-.++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~-------------~~~~t~~er~il~~~~~~~f~v~lhyafq 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR-------------DRTHTKQERIILAFVHNTPFLVKLHYAFQ 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccc-------------cccccccHHHHHhhccCCCceeeeeeeec
Confidence 379999999998753 24567899999877643211 11145567888888877999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeec
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG 259 (574)
.+..++++++|..||.|+..+ .....+.+...+.+...++-+++++|..+|+|||+|++||+++ ..|++++.|||
T Consensus 68 t~~kl~l~ld~~rgg~lft~l--~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld---~~Ghi~~tdfg 142 (612)
T KOG0603|consen 68 TDGKLYLILDFLRGGDLFTRL--SKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL---LEGHIKLTDFG 142 (612)
T ss_pred cccchhHhhhhcccchhhhcc--ccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec---ccCccccCCch
Confidence 999999999999999998877 4456788899999999999999999999999999999999999 58999999999
Q ss_pred cccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCC
Q 008197 260 LSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 339 (574)
Q Consensus 260 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 339 (574)
+++..-..... |||..|||||+++ ....++|+||+|++.|+|+||..||.. ++...|+...+.++. .+
T Consensus 143 lske~v~~~~~---cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l 210 (612)
T KOG0603|consen 143 LSKEAVKEKIA---CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----EL 210 (612)
T ss_pred hhhHhHhhhhc---ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hh
Confidence 99875443332 9999999999999 567889999999999999999999977 677888887766654 46
Q ss_pred CHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 340 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 340 ~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+..+++++..++..+|..|.. +.++++|+||...
T Consensus 211 ~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 211 SAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred hHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 688999999999999999975 4789999999865
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=188.05 Aligned_cols=142 Identities=30% Similarity=0.523 Sum_probs=128.2
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
....++.+++++|+++|..||+|++|.|++.||..++ +.+|.++++.++.++|..+|. +.|.|+|.+|+.+|......
T Consensus 10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~il-r~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~ 87 (160)
T COG5126 10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR 87 (160)
T ss_pred hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHH-HHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc
Confidence 4567899999999999999999999999999999999 579999999999999999999 99999999999988765432
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCc------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.. . .++++.||+.||+|++|+|+..||+.++..+|+ ++.+++.+|.|+||.|+|+||++++...
T Consensus 88 ~~--~---~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~ 157 (160)
T COG5126 88 GD--K---EEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDS 157 (160)
T ss_pred CC--c---HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence 21 1 347889999999999999999999999999884 9999999999999999999999998753
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-25 Score=234.30 Aligned_cols=222 Identities=29% Similarity=0.514 Sum_probs=173.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
....|..+++|-.|+||.||.++|+.+.+.+|+| +.+.....| + |+... +.|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilR-------------------n---ilt~a-~npfvv- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILR-------------------N---ILTFA-GNPFVV- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhh-------------------c---ccccc-CCccee-
Confidence 3457899999999999999999999999999995 444321110 1 22222 345444
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
|+-...+ +..++++... +.+++|||+-||+|||+||+|.+|.. -|++
T Consensus 136 --------------------gDc~tll--k~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~---mGhi 182 (1205)
T KOG0606|consen 136 --------------------GDCATLL--KNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITS---MGHI 182 (1205)
T ss_pred --------------------chhhhhc--ccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeee---cccc
Confidence 3333333 2234555433 78999999999999999999999994 7899
Q ss_pred EEEeeccccccCCCC--------------C--ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCC
Q 008197 254 KATDFGLSDFIKPGK--------------K--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT 316 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--------------~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~ 316 (574)
|++|||+++..-... . -..+||||.|+|||++. ..|+..+|||++|+|+|+.+-|+.||.+.+
T Consensus 183 KlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 183 KLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred cccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 999999986532110 0 12469999999999764 568999999999999999999999999999
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCC---CHHHHhcCccccccC
Q 008197 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREGG 374 (574)
Q Consensus 317 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~~~l~hp~~~~~~ 374 (574)
+.+++..++.....++... ..++++++++|.++|..+|..|. .+-++.+|+||+...
T Consensus 263 peelfg~visd~i~wpE~d-ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 263 PEELFGQVISDDIEWPEED-EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred HHHHHhhhhhhhccccccC-cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 9999999999888877764 45789999999999999999995 577888999999754
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-23 Score=188.50 Aligned_cols=190 Identities=18% Similarity=0.272 Sum_probs=143.6
Q ss_pred eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
.+...|++|+||+||++.. .+..++.+.+.......+ ......+.+|+++|++|.+|+++++++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~-----------~~~~~l~~rE~~iL~~L~~~~~vP~ll~~- 70 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLR-----------GVAWWLARREALALRQLDGLPRTPRLLHW- 70 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhh-----------hHHHHHHHHHHHHHHhcCCCCCCCEEEEE-
Confidence 4567899999999998853 677888777665422111 11223578999999999777999999986
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC-CCCcEEEccCCCCCCeEEEe
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSLKATD 257 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDl-kp~Nill~~~~~~~~vkl~D 257 (574)
+..+++|||+.|.+|...+. . ....++.|++.+|.++|++||+|||| ||+|||++ .++.++|+|
T Consensus 71 ---~~~~lvmeyI~G~~L~~~~~--------~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LID 135 (218)
T PRK12274 71 ---DGRHLDRSYLAGAAMYQRPP--------R-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVID 135 (218)
T ss_pred ---cCEEEEEeeecCccHHhhhh--------h-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEE
Confidence 34699999999998865331 1 12357889999999999999999999 79999998 467899999
Q ss_pred eccccccCCCCCc--------------cccccCccccchHhhh--cCCC-CCcchHhHHHHHHHHHhCCCCCCCCCh
Q 008197 258 FGLSDFIKPGKKF--------------QDIVGSAYYVAPEVLK--RKSG-PESDVWSIGVITYILLCGRRPFWDKTE 317 (574)
Q Consensus 258 FG~a~~~~~~~~~--------------~~~~gt~~y~aPE~~~--~~~~-~~~DvwSlG~il~elltg~~Pf~~~~~ 317 (574)
||+|......... .-...++.|++|+-.. ...+ ...++++.|+-+|.++|++.|+++..+
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 9999865433210 0123688899998532 2333 567999999999999999999987654
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=185.75 Aligned_cols=143 Identities=29% Similarity=0.541 Sum_probs=125.3
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
++..++.+++++|..||+|++|+|+..||..++ +.+|..+++.++..+++.+|.|++|.|+|+||+.++..........
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~l-r~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVL-RSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 456778899999999999999999999999999 5699999999999999999999999999999999887543322211
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
. .....+++||+.||+|++|+|+.+||+.++..+| +++.+++.+|.|+||.|+|+||+++|...
T Consensus 81 ~-~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 81 E-ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK 150 (151)
T ss_pred c-ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence 1 1234788999999999999999999999999888 38999999999999999999999999753
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-23 Score=190.53 Aligned_cols=154 Identities=19% Similarity=0.194 Sum_probs=111.4
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhh--------hhh---hhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVV--------SFQ---DLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------~~~---~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
...||+|+||.||+|.+. +|+.||||+++......... .+. ...............|+.++..+. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 467999999999999986 89999999997653211000 000 000000011233456999999995 77
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeecCCCCcEEEccCC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~L-H~~~iiHrDlkp~Nill~~~~ 248 (574)
++.....+.... .+|||||++|+++..... ...++++..+..++.|++.+|.+| |+.||+||||||+|||++
T Consensus 80 ~v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~--- 152 (190)
T cd05147 80 GIPCPEPILLKS--HVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH--- 152 (190)
T ss_pred CCCCCcEEEecC--CEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE---
Confidence 764433332222 389999999887655432 235789999999999999999999 799999999999999997
Q ss_pred CCCCeEEEeecccccc
Q 008197 249 EDSSLKATDFGLSDFI 264 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~ 264 (574)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 367999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=193.60 Aligned_cols=181 Identities=14% Similarity=0.110 Sum_probs=131.5
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
-+.++|++.++||.|+||.||++.+ ++..+|||++......... ..+ .-...+.+.+|+..+.+| .||+|+
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~-~~~-----~f~~g~~~e~Ea~~l~rL-~~~GI~ 98 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTER-FLK-----SFVKGDYYENLIVQTDRV-RSEGLA 98 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHH-HHH-----hhhhhHHHHHHHHHHHHH-HHCCCC
Confidence 3568999999999999999999754 4678999999764211000 000 000122368999999999 599999
Q ss_pred eEEEEEEcC--------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 173 KFYNAFEDD--------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 173 ~~~~~~~~~--------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
.+.+++... +..+|||||++|.+|.+.. .+++ ....+++.+|..||..|++|||+||+||++
T Consensus 99 ~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili 168 (232)
T PRK10359 99 SLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIV 168 (232)
T ss_pred cceEeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEE
Confidence 999886643 3589999999999987753 2333 246699999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILL 306 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~ell 306 (574)
+. ++ ++|+|||.+........... =++...+..++|+||||+++..+.
T Consensus 169 ~~---~g-i~liDfg~~~~~~e~~a~d~----------~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 169 SK---NG-LRIIDLSGKRCTAQRKAKDR----------IDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred eC---CC-EEEEECCCcccccchhhHHH----------HHHHhHhcccccccceeEeehHHH
Confidence 84 45 99999998765432111100 022344567899999999887654
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-23 Score=198.95 Aligned_cols=236 Identities=23% Similarity=0.365 Sum_probs=146.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC---------
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG--------- 167 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~--------- 167 (574)
.+..++.||.|+++.||.++|..||+.+|||++.... .......+.+.+|.-....+.+
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~------------~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~ 80 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA------------DASANEYEQLKEEQLAITLFPGVKNPKEAYR 80 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS------------TTHTTHHHHHHHHHHGGGGSTT--SHHHHHH
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc------------ccchHHHHHHHHHHHHhhhhccCCCHHHHHH
Confidence 4677889999999999999999999999999986542 1112234455555433322211
Q ss_pred CCCcceEEEEEE------------cCCE-----EEEEEeccCCCchHHHHH---hhcCCC--CCHHHHHHHHHHHHHHHH
Q 008197 168 HENVVKFYNAFE------------DDNY-----VYIAMELCEGGELLDRIL---AKKDSR--YTEKDAAVVVRQMLRVAA 225 (574)
Q Consensus 168 hpniv~~~~~~~------------~~~~-----~~lv~e~~~gg~L~~~l~---~~~~~~--l~~~~~~~i~~qi~~~l~ 225 (574)
|-.++..++... .... .+++|+-+ .++|.+.+. ...... +.......+..|++..++
T Consensus 81 ~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA 159 (288)
T PF14531_consen 81 HLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVA 159 (288)
T ss_dssp HH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred hceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Confidence 222333333221 1122 37788887 458876642 121111 122223445589999999
Q ss_pred HHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC---------CCCCcchH
Q 008197 226 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---------SGPESDVW 296 (574)
Q Consensus 226 ~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---------~~~~~Dvw 296 (574)
+||..||+|+||+|+|++++ .+|.++|+||+.....+. .......+..|.|||..... ++.+.|.|
T Consensus 160 ~Lh~~GlVHgdi~~~nfll~---~~G~v~Lg~F~~~~r~g~--~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW 234 (288)
T PF14531_consen 160 NLHSYGLVHGDIKPENFLLD---QDGGVFLGDFSSLVRAGT--RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAW 234 (288)
T ss_dssp HHHHTTEEEST-SGGGEEE----TTS-EEE--GGGEEETTE--EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHH
T ss_pred HHhhcceEecccceeeEEEc---CCCCEEEcChHHHeecCc--eeeccCCCcccCChhhhhhhcccCcccceeeeccCHH
Confidence 99999999999999999999 589999999997765432 22223455789999976432 36778999
Q ss_pred hHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCC
Q 008197 297 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358 (574)
Q Consensus 297 SlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 358 (574)
+||+++|.|.+|+.||........... ....+..+|+.+++||..+|+.+|.+|
T Consensus 235 ~LG~~ly~lWC~~lPf~~~~~~~~~~~--------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 235 QLGITLYSLWCGRLPFGLSSPEADPEW--------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHHSS-STCCCGGGSTSGG--------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHHHHccCCCCCCCccccccc--------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999999999999999965533221111 122234688999999999999999988
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-22 Score=192.28 Aligned_cols=195 Identities=25% Similarity=0.421 Sum_probs=143.8
Q ss_pred cCCCCcceEEEEEEc---------------------------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHH
Q 008197 166 AGHENVVKFYNAFED---------------------------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218 (574)
Q Consensus 166 ~~hpniv~~~~~~~~---------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ 218 (574)
..|||||+++.+|.+ +..+|+||-.++. +|.+++.. ...+....+.++.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~---~~~s~r~~~~~la 348 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWT---RHRSYRTGRVILA 348 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhc---CCCchHHHHHHHH
Confidence 369999999887632 2368999998854 88888843 3567888999999
Q ss_pred HHHHHHHHHHHCCCEeecCCCCcEEEccC-CCCCCeEEEeeccccccCC-------CCCccccccCccccchHhhhcCC-
Q 008197 219 QMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLKRKS- 289 (574)
Q Consensus 219 qi~~~l~~LH~~~iiHrDlkp~Nill~~~-~~~~~vkl~DFG~a~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~- 289 (574)
|+++|+.|||.+||.|||||.+|||+.-+ ++-..+.|+|||.+---.. ....-..-|...-||||+....+
T Consensus 349 QlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 349 QLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 99999999999999999999999999753 2345788999997632111 11123446888899999987543
Q ss_pred ------CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCH--
Q 008197 290 ------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA-- 361 (574)
Q Consensus 290 ------~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~-- 361 (574)
..++|.|+.|.+.||+++...||+...+..+-..-.+ ....+ .....+++.++++|..+|+.||++|+|+
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-e~qLP-alp~~vpp~~rqlV~~lL~r~pskRvsp~i 506 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-ESQLP-ALPSRVPPVARQLVFDLLKRDPSKRVSPNI 506 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh-hhhCC-CCcccCChHHHHHHHHHhcCCccccCCccH
Confidence 4579999999999999999999987543221111111 11111 1123578899999999999999999984
Q ss_pred -HHHhc
Q 008197 362 -AQALS 366 (574)
Q Consensus 362 -~~~l~ 366 (574)
..+|+
T Consensus 507 AANvl~ 512 (598)
T KOG4158|consen 507 AANVLN 512 (598)
T ss_pred HHhHHH
Confidence 45555
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=182.26 Aligned_cols=155 Identities=18% Similarity=0.189 Sum_probs=113.8
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhh-hh-------hhhh---hccchhhHHHHHHHHHHHHHhcCCC
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRV-VS-------FQDL---KMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-~~-------~~~~---~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.+.||+|+||.||+|.+. +|+.||||+++........ .. +... ..........+..|...+.++. |+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 568999999999999987 8999999999875211000 00 0000 0000111334568999999995 89
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~ 248 (574)
++.....+.... .||||||++|+++...... ..+++...+..++.|++.+|.++|. .||+||||||+|||++
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~--- 152 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH--- 152 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE---
Confidence 875444433332 4899999998865544322 3568889999999999999999999 9999999999999997
Q ss_pred CCCCeEEEeeccccccC
Q 008197 249 EDSSLKATDFGLSDFIK 265 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~ 265 (574)
++.++|+|||+|....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 4789999999997654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-22 Score=183.77 Aligned_cols=240 Identities=17% Similarity=0.189 Sum_probs=186.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
..+.-+|.....|..|+|++. |..+++|++..... .......|..|.-.|+-. .||||+.+++.
T Consensus 192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~-------------t~risrdfneefp~lrif-shpnilpvlga 255 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREV-------------TARISRDFNEEFPALRIF-SHPNILPVLGA 255 (448)
T ss_pred hhhhhhhccCCCccccccccc--Ccchhhhhhhhhhc-------------chhhcchhhhhCcceeee-cCCchhhhhhh
Confidence 445667889999999999754 55677887754322 222345677888888877 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCCCCCCeEE
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
|..+.++.++..|++-|+|+..+..+.+--....++..++.+|+.|+.|||+.. |.---|....++++ ++.+.+|
T Consensus 256 cnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edltari 332 (448)
T KOG0195|consen 256 CNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLTARI 332 (448)
T ss_pred ccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhhhhe
Confidence 999999999999999999999998777666788899999999999999999974 44446888889998 3545444
Q ss_pred --EeeccccccCCCCCccccccCccccchHhhhcCC----CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 256 --TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 256 --~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
+|--++... ....-.|.||+||.+...+ -.++|+|||++++|||.|...||.+.++.+.-.+|.-...
T Consensus 333 smad~kfsfqe------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl 406 (448)
T KOG0195|consen 333 SMADTKFSFQE------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL 406 (448)
T ss_pred ecccceeeeec------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc
Confidence 343333211 1224468899999987654 3578999999999999999999988888776666654443
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHH
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 364 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~ 364 (574)
.. ...|.++..+..|+.-|+..||.+||..+.+
T Consensus 407 rv--~ippgis~hm~klm~icmnedpgkrpkfdmi 439 (448)
T KOG0195|consen 407 RV--HIPPGISRHMNKLMNICMNEDPGKRPKFDMI 439 (448)
T ss_pred cc--cCCCCccHHHHHHHHHHhcCCCCcCCCccee
Confidence 32 2337899999999999999999999987765
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=179.61 Aligned_cols=138 Identities=22% Similarity=0.358 Sum_probs=107.6
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc----CCCCcceEEE
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA----GHENVVKFYN 176 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~----~hpniv~~~~ 176 (574)
...||+|+||.||. ++.++.. +||++..... ...+.+.+|+.+++.|. +||||+++++
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---------------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg 68 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---------------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYG 68 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecccc---------------chHHHHHHHHHHHHHhhccCCCCcccceeeE
Confidence 46799999999995 7777666 6998865311 12356899999999994 3799999999
Q ss_pred EEEcCC---EEE-EEEec--cCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCCEeecCCCCcEEEccCC-
Q 008197 177 AFEDDN---YVY-IAMEL--CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHGLVHRDMKPENFLFKSAK- 248 (574)
Q Consensus 177 ~~~~~~---~~~-lv~e~--~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l-~~LH~~~iiHrDlkp~Nill~~~~- 248 (574)
+++++. .++ +|+|| +++|+|.+++.. ..+++. ..++.|++.++ +|||+++|+||||||+|||++..+
T Consensus 69 ~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~ 143 (210)
T PRK10345 69 TVETDCGTGYVYDVIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISE 143 (210)
T ss_pred EEEeCCCCeEEEEEEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCC
Confidence 999863 434 78999 567999998833 346655 46688888888 999999999999999999998532
Q ss_pred CCCCeEEEe-eccc
Q 008197 249 EDSSLKATD-FGLS 261 (574)
Q Consensus 249 ~~~~vkl~D-FG~a 261 (574)
.+..++|+| ||..
T Consensus 144 ~~~~~~LiDg~G~~ 157 (210)
T PRK10345 144 SEVIPVVCDNIGES 157 (210)
T ss_pred CCCcEEEEECCCCc
Confidence 345899999 5543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-22 Score=213.91 Aligned_cols=240 Identities=24% Similarity=0.324 Sum_probs=173.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|...+.||.+.|=+|.+|++. .| .|+||++-+....+. -....+...|++ .... .|||++.+.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~s-----------L~~~~qrL~~ik-~~l~-~~pn~lPfqk 88 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTIS-----------LRPFKQRLEEIK-FALM-KAPNCLPFQK 88 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCC-----------chHHHHHHHHHH-HHhh-cCCcccchHH
Confidence 5778899999999999999865 45 499999977632111 112223334444 3333 6999999988
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+-..+...|||=+|.. -+|+|.+ ....-+...+-+-|+.||+.||.-+|..||+|||||.+|||+.+ -.-+.|+
T Consensus 89 ~~~t~kAAylvRqyvk-hnLyDRl--STRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS---WNW~~Lt 162 (1431)
T KOG1240|consen 89 VLVTDKAAYLVRQYVK-HNLYDRL--STRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS---WNWLYLT 162 (1431)
T ss_pred HHHhhHHHHHHHHHHh-hhhhhhh--ccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee---echhhhh
Confidence 8888888999999995 5999988 33344677888889999999999999999999999999999995 5678999
Q ss_pred eecccccc--CCCC--Cc----cccccCccccchHhhhcC------------CCCCcchHhHHHHHHHHHh-CCCCCCCC
Q 008197 257 DFGLSDFI--KPGK--KF----QDIVGSAYYVAPEVLKRK------------SGPESDVWSIGVITYILLC-GRRPFWDK 315 (574)
Q Consensus 257 DFG~a~~~--~~~~--~~----~~~~gt~~y~aPE~~~~~------------~~~~~DvwSlG~il~ellt-g~~Pf~~~ 315 (574)
||..-+.. ...+ .+ .+..--.+|+|||.+... .+++.||||+||+++||++ |++||.-.
T Consensus 163 DFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS 242 (1431)
T KOG1240|consen 163 DFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS 242 (1431)
T ss_pred cccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH
Confidence 99876532 1111 11 112223369999987431 2567899999999999998 78998210
Q ss_pred -------ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 316 -------TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 316 -------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
......+.++.... +..++.+|..|++.||.+|.||++.|+.
T Consensus 243 QL~aYr~~~~~~~e~~Le~Ie----------d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 243 QLLAYRSGNADDPEQLLEKIE----------DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHhHhccCccCHHHHHHhCc----------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 00111122222111 2357899999999999999999999874
|
|
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-20 Score=157.08 Aligned_cols=141 Identities=27% Similarity=0.471 Sum_probs=127.1
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
...+.+++..++++.|+.||.+++|+|+.+||..++ +++|+.+..+++.+++..+|.++.|.|+|++|+..+.......
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAm-ralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~ 102 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAM-RALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGER 102 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHH-HHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhcc
Confidence 356778888999999999999999999999999999 6799999999999999999999999999999999877654333
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCc------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
. ...+++.+|+.+|.|++|.|+..+|+.+...+|+ +.++++++|.|+||.|+-+||..+|+.
T Consensus 103 d-----t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 103 D-----TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred C-----cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 3 1347889999999999999999999999998884 899999999999999999999999975
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=205.45 Aligned_cols=197 Identities=25% Similarity=0.368 Sum_probs=156.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
...|.|.+.||.|+||+||+|.+.. |+.||+|+=+.... ++- -...++..-++ ++ --+.|..+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~------WEf------YI~~q~~~RLk-~~---~~~~~~~~ 759 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP------WEF------YICLQVMERLK-PQ---MLPSIMHI 759 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc------eee------eehHHHHHhhc-hh---hhcchHHH
Confidence 3579999999999999999999766 99999998655421 100 01112222222 11 13566677
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc----CCCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS----AKED 250 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~----~~~~ 250 (574)
..++...+.-+||+||.+.|+|++++ +..+.+++..+..++.|+|..++.||..+|||+||||+|+||.. +.+.
T Consensus 760 ~~a~~~~~~S~lv~ey~~~Gtlld~~--N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 760 SSAHVFQNASVLVSEYSPYGTLLDLI--NTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred HHHHccCCcceeeeeccccccHHHhh--ccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcc
Confidence 77777778889999999999999988 46678999999999999999999999999999999999999964 2345
Q ss_pred CCeEEEeeccccc---cCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRR 310 (574)
Q Consensus 251 ~~vkl~DFG~a~~---~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~ 310 (574)
..++|+|||.|-. ..++..+...++|-.+-.+|+..|. ++..+|.|.|+.+++-||.|+.
T Consensus 838 ~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 6799999999854 3455567788999999999999876 5899999999999999999854
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-19 Score=173.97 Aligned_cols=158 Identities=22% Similarity=0.158 Sum_probs=114.5
Q ss_pred ceeecccccccCCeEEEEEE-EcCCCCEEEEEEeccchhhhhhh--hh---hh----hhccchhhHHHHHHHHHHHHHhc
Q 008197 97 RYTIGKLLGHGQFGYTYVAT-DKANGDRVAVKKIEKNKILIRVV--SF---QD----LKMILPIAVEDVKREVKILQALA 166 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~--~~---~~----~~~~~~~~~~~~~~E~~il~~l~ 166 (574)
-|.+.+.||+|+||.||+|. +..+|+.||||+++......... .. .. ...........+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 67789999999987642100000 00 00 00000111234678999999995
Q ss_pred CC--CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CEeecCCCCcEE
Q 008197 167 GH--ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFL 243 (574)
Q Consensus 167 ~h--pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nil 243 (574)
+ ..+++++++ . ..++||||++|++|..... ....+....+..++.||+.+|.+||.+| |+||||||+||+
T Consensus 109 -~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIl 181 (237)
T smart00090 109 -EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNIL 181 (237)
T ss_pred -hcCCCCCeeeEe---c-CceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEE
Confidence 4 334455543 2 3589999999988765442 2345667778899999999999999999 999999999999
Q ss_pred EccCCCCCCeEEEeeccccccC
Q 008197 244 FKSAKEDSSLKATDFGLSDFIK 265 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~ 265 (574)
++ .+.++|+|||+|....
T Consensus 182 i~----~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 182 VH----DGKVVIIDVSQSVELD 199 (237)
T ss_pred EE----CCCEEEEEChhhhccC
Confidence 97 4689999999987543
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-20 Score=188.58 Aligned_cols=207 Identities=22% Similarity=0.358 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHhcCCCCcceEE------EEEE-----cCCEEEEEEeccCCCchHHHHHhh-cCCCCCHHHHHHHHHH
Q 008197 152 VEDVKREVKILQALAGHENVVKFY------NAFE-----DDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQ 219 (574)
Q Consensus 152 ~~~~~~E~~il~~l~~hpniv~~~------~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~q 219 (574)
.....+++-.+.-..+|+..+..- ..+. ...++||.|++|...+|.+++... .....+...+..++.|
T Consensus 288 ~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q 367 (516)
T KOG1033|consen 288 CKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQ 367 (516)
T ss_pred hhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHh
Confidence 344555655555554455443321 1111 134689999999999999999633 3445678889999999
Q ss_pred HHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCC-------CccccccCccccchHhhhc-CCCC
Q 008197 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGP 291 (574)
Q Consensus 220 i~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~ 291 (574)
+..|++| +|.+|||+||.||++. .+..+||.|||+........ .....+||.+||+||.+.+ .|+.
T Consensus 368 ~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~ 441 (516)
T KOG1033|consen 368 IAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSE 441 (516)
T ss_pred hccchhh---ccchhhhccccccccc---cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhh
Confidence 9999999 9999999999999997 46689999999987654433 4566799999999998875 6799
Q ss_pred CcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 292 ESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 292 ~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
++||||||+||+||++ =..+|... ..+..+-.+ .+++..+.+. +.-..|+..||...|.+||++.+.--|+|.
T Consensus 442 kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r~g--~ip~~~~~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 442 KVDIYALGLILAELLIQFSTQFERI---ATLTDIRDG--IIPPEFLQDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcchhhHHHHHHHHHHHhccHHHHH---HhhhhhhcC--CCChHHhhcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 9999999999999997 23332111 112222222 2232233333 345689999999999999988888778775
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-21 Score=206.35 Aligned_cols=261 Identities=28% Similarity=0.484 Sum_probs=207.6
Q ss_pred cceeecccccccCCeEEEEEEEcC-CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..|.+.+.||+|+|+.|-...... +...+|+|.+.... ......+.+..|..+-+.+..|+|++.+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-------------~~~~~~~~i~~e~~~~~~~s~h~n~~~~ 86 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-------------KSEDSSEHIDTETDIQKKLSKHSNTVHM 86 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-------------CccchhhhcCcccccccccccccccccc
Confidence 468889999999999998887533 34466777664431 0112344556677777777569999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCEeecCCCCcEEEccCCCCC-C
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDS-S 252 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~iiHrDlkp~Nill~~~~~~~-~ 252 (574)
++........+++++|..|+++++.+........+...+..++.|+..++.|+| ..++.|||+||+|.+++. .+ .
T Consensus 87 ~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~---s~~~ 163 (601)
T KOG0590|consen 87 IEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE---SGSA 163 (601)
T ss_pred CCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---CCCc
Confidence 999999999999999999999988763222226788889999999999999999 999999999999999984 55 8
Q ss_pred eEEEeeccccccCC--C--CCcccccc-CccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhH-HHHHH
Q 008197 253 LKATDFGLSDFIKP--G--KKFQDIVG-SAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEV 324 (574)
Q Consensus 253 vkl~DFG~a~~~~~--~--~~~~~~~g-t~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~~~i 324 (574)
+++.|||+|..... + ......+| ++.|+|||...+. ..+..|+||+|+++.-+++|..|+....... .+...
T Consensus 164 l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~ 243 (601)
T KOG0590|consen 164 LKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSW 243 (601)
T ss_pred ccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceee
Confidence 99999999976544 2 22345688 9999999988773 3788999999999999999999996554322 22333
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
......+...+|..++....+++.+++..+|..|.+..++-.+||+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 244 KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 333334456678899999999999999999999999999999999988
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.2e-19 Score=181.59 Aligned_cols=199 Identities=26% Similarity=0.345 Sum_probs=157.1
Q ss_pred HHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-EeecCCCCc
Q 008197 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL-VHRDMKPEN 241 (574)
Q Consensus 163 ~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i-iHrDlkp~N 241 (574)
+.+ .|.|+.++++.+.++...++|.+||..|+|.+.+.. ....++......+++.|+.||.|||.-.| .|+.|++.|
T Consensus 2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 456 499999999999999999999999999999998854 45678888999999999999999999876 999999999
Q ss_pred EEEccCCCCCCeEEEeeccccccCCC---CCccccccCccccchHhhhcC--------CCCCcchHhHHHHHHHHHhCCC
Q 008197 242 FLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK--------SGPESDVWSIGVITYILLCGRR 310 (574)
Q Consensus 242 ill~~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~--------~~~~~DvwSlG~il~elltg~~ 310 (574)
++++ ....+||+|||+....... .......-...|.|||++... .+.+.||||+|++++|+++...
T Consensus 80 Clvd---~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 80 CLVD---SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred ceee---eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 9999 4889999999998766421 111222334569999998753 3567999999999999999999
Q ss_pred CCCCC----ChhHHHHHHHh-CCCCCCCCCC--CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 311 PFWDK----TEDGIFKEVLR-NKPDFRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 311 Pf~~~----~~~~~~~~i~~-~~~~~~~~~~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
||... ...++...+.. +...+++..+ ...++++..++..||..+|..||+++++-.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99653 22345555555 2222332222 145567899999999999999999998754
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.4e-18 Score=163.47 Aligned_cols=142 Identities=24% Similarity=0.316 Sum_probs=113.0
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
+.||+|++|.||+|.+ .|..|+||+.......... .........+.+|+.++..+. |++|+....++.+.
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~-------~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~ 71 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPE-------LDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDP 71 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChH-------HHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeC
Confidence 5799999999999975 6788999986543211000 001123356789999999995 99988777777777
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+..++||||++|++|.+.+... .. ....++.+++.+|.++|+.|++|||++|.|||++ .+.++|+|||++
T Consensus 72 ~~~~lv~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a 141 (211)
T PRK14879 72 ENFIIVMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLA 141 (211)
T ss_pred CCCEEEEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcc
Confidence 8889999999999998877321 12 7889999999999999999999999999999997 567999999988
Q ss_pred cc
Q 008197 262 DF 263 (574)
Q Consensus 262 ~~ 263 (574)
..
T Consensus 142 ~~ 143 (211)
T PRK14879 142 EF 143 (211)
T ss_pred cC
Confidence 65
|
|
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=156.60 Aligned_cols=143 Identities=26% Similarity=0.457 Sum_probs=123.6
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
....+++.+++++..+|..+|.+++|.|+..||..++. .+|..++...+..+|..+|.+++|.|+|+||+.++......
T Consensus 7 ~~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~-~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 85 (158)
T PTZ00183 7 ERPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMR-SLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE 85 (158)
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC
Confidence 34568889999999999999999999999999999995 47888888999999999999999999999999876543211
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.. ....++.+|+.+|++++|+|+.+||..++...+ ++..+|..+|.|++|.|+|+||+.+|...
T Consensus 86 ~~-----~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~ 155 (158)
T PTZ00183 86 RD-----PREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKT 155 (158)
T ss_pred CC-----cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence 11 123678899999999999999999999887655 48899999999999999999999999863
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=161.00 Aligned_cols=139 Identities=24% Similarity=0.312 Sum_probs=106.2
Q ss_pred cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCC
Q 008197 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 182 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~ 182 (574)
.||+|+||.||+|. .+|..|++|.......... ..........+.+|+.++..+. |+++.....++...+
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~ 70 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHP-------ELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPD 70 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCc-------hHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECC
Confidence 48999999999997 4678999998654311000 0001123466789999999995 777655555555666
Q ss_pred EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecccc
Q 008197 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262 (574)
Q Consensus 183 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~ 262 (574)
..++||||++|++|.+.+... .. .++.+++.+|.+||+.|++|||++|.||+++ ++.++|+|||++.
T Consensus 71 ~~~lv~e~~~g~~l~~~~~~~--~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~ 137 (199)
T TIGR03724 71 NKTIVMEYIEGKPLKDVIEEG--ND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGK 137 (199)
T ss_pred CCEEEEEEECCccHHHHHhhc--HH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCc
Confidence 779999999999998876321 10 7899999999999999999999999999997 5789999999987
Q ss_pred cc
Q 008197 263 FI 264 (574)
Q Consensus 263 ~~ 264 (574)
..
T Consensus 138 ~~ 139 (199)
T TIGR03724 138 YS 139 (199)
T ss_pred CC
Confidence 63
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.9e-18 Score=152.43 Aligned_cols=140 Identities=29% Similarity=0.549 Sum_probs=120.4
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
+..+++++++++++.|..+|.+++|.|+.+||..++.. ++..++.+.+..+|+.+|.+++|.|+|+||+.++.......
T Consensus 2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~ 80 (149)
T PTZ00184 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT 80 (149)
T ss_pred CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC
Confidence 34577888999999999999999999999999999954 78888889999999999999999999999998765432111
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
. ....+..+|+.+|.+++|+|+.+||..++...+ ++..++..+|.+++|.|+|+||+.+|.
T Consensus 81 ~-----~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 81 D-----SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred c-----HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 1 123577899999999999999999999886654 388899999999999999999999886
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=157.37 Aligned_cols=151 Identities=25% Similarity=0.307 Sum_probs=109.5
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhh-hh------hccchhhHHHHHHHHHHHHHhcCCC-
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ-DL------KMILPIAVEDVKREVKILQALAGHE- 169 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~E~~il~~l~~hp- 169 (574)
|.+.+.||.|+||.||++.+. +|+.||||++............. +. .............|+.++..+. |+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 778899999999999999864 79999999987643111100000 00 0001112334678999999994 76
Q ss_pred -CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 170 -NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 170 -niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
.++..++ ....++||||++|++|..... ......++.+++.++.++|..||+||||||+||+++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~--- 159 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD--- 159 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---
Confidence 4455544 234589999999998865331 134677889999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccC
Q 008197 249 EDSSLKATDFGLSDFIK 265 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~ 265 (574)
.++.++|+|||++....
T Consensus 160 ~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 160 DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcEEEEECCccccCC
Confidence 47899999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=139.94 Aligned_cols=137 Identities=23% Similarity=0.397 Sum_probs=121.4
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
+...|++.++.+++++|..+|.|+||.|++++|+..+. ++|..+++++++.|+++ ..|.|+|.-|+.++-.....
T Consensus 22 vFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~a-SlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~g 96 (171)
T KOG0031|consen 22 VFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLA-SLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNG 96 (171)
T ss_pred HHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHH-HcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcC
Confidence 34467899999999999999999999999999999995 59999999999999987 68899999999987654332
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
.+. +..+..||+.||.+++|.|..+.|+++|...| +++.+++.+-.|..|.|+|.+|+.++.
T Consensus 97 --tdp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 97 --TDP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred --CCH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 222 34678899999999999999999999999988 499999999999999999999999997
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-17 Score=178.18 Aligned_cols=149 Identities=23% Similarity=0.292 Sum_probs=114.2
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
......|...+.||+|+||.||+|.+. +..+++|+......... ........+.+.+|+.+++.+. |+++
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l~-~~~i 398 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHP-------ELDERLRTERTRAEARLLSEAR-RAGV 398 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeec--CccceeEEEecccccch-------hHHHHHHHHHHHHHHHHHHhhc-ccCC
Confidence 334445677889999999999999754 34455554322111000 0001123456889999999995 9999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+..+.++.+....++||||++|++|.+.+. ....++.+++.+|.+||+.||+||||||+|||++ ++
T Consensus 399 ~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~ 464 (535)
T PRK09605 399 PTPVIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DD 464 (535)
T ss_pred CeeEEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CC
Confidence 988887777777899999999999988773 3567899999999999999999999999999994 57
Q ss_pred CeEEEeecccccc
Q 008197 252 SLKATDFGLSDFI 264 (574)
Q Consensus 252 ~vkl~DFG~a~~~ 264 (574)
.++|+|||+++..
T Consensus 465 ~~~liDFGla~~~ 477 (535)
T PRK09605 465 RLYLIDFGLGKYS 477 (535)
T ss_pred cEEEEeCcccccC
Confidence 8999999999763
|
|
| >KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-17 Score=136.96 Aligned_cols=139 Identities=21% Similarity=0.324 Sum_probs=119.0
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhchHHHHhhhhccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~I~f~EF~~~~~~~~~~~ 486 (574)
.+++++..+++++|..||..+||+|+..+...+| +++|.+|++.++.+....++.+ +-..|+|++|+.++.....-+
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvl-RalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk 82 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVL-RALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNK 82 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHH-HHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcc
Confidence 3567788999999999999999999999999999 7799999999999999999877 457899999999887655443
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCc------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..... +...+-++.||++++|+|...||+++|..+|+ ++.++... .|++|.|+|++|++.+.
T Consensus 83 ~q~t~---edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 83 DQGTY---EDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccCcH---HHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 33322 25566899999999999999999999999984 78888875 58899999999998875
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.6e-17 Score=151.51 Aligned_cols=153 Identities=22% Similarity=0.211 Sum_probs=102.4
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhh-------hh--hhhccchhhHHHHHHHHHHHHHhcCC-CC
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS-------FQ--DLKMILPIAVEDVKREVKILQALAGH-EN 170 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~E~~il~~l~~h-pn 170 (574)
.+.||+|+||.||+|.+. +|+.||||++........... .. ...............|...+..+..+ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999976 899999999876422111000 00 00000001111234677777777422 23
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~ 249 (574)
+++.+.+ ...++||||++|+++......... . ...+..++.+++.++.++|. .||+||||||+||+++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~---- 149 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD---- 149 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----
Confidence 5555553 235899999998654322111110 1 16788999999999999999 9999999999999998
Q ss_pred CCCeEEEeeccccccC
Q 008197 250 DSSLKATDFGLSDFIK 265 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~ 265 (574)
++.++|+|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 5789999999996543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.7e-17 Score=146.40 Aligned_cols=137 Identities=29% Similarity=0.472 Sum_probs=115.8
Q ss_pred cccchHHhhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhchHHHHhhhhcc
Q 008197 408 STLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAATLHVHQL 485 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-I~f~EF~~~~~~~~~~ 485 (574)
+.++..++..|...|.++|.+ ++|+|+++||..+.. +.. +...+++++.+|.+++|. |+|++|+..+......
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~--~~~---Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~ 99 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE--LAL---NPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPK 99 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH--Hhc---CcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCC
Confidence 458899999999999999999 999999999999883 333 346788999999999988 9999999988765433
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-------------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
... ..+++.||++||.+++|+|+.+|+..++..+- -++.+|.++|.|+||+|+|+||++++.
T Consensus 100 ~~~-----~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 100 ASK-----REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE 174 (187)
T ss_pred ccH-----HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 221 24889999999999999999999998775432 167789999999999999999999998
Q ss_pred hc
Q 008197 553 TA 554 (574)
Q Consensus 553 ~~ 554 (574)
+.
T Consensus 175 ~~ 176 (187)
T KOG0034|consen 175 KQ 176 (187)
T ss_pred cC
Confidence 76
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.2e-16 Score=147.63 Aligned_cols=149 Identities=16% Similarity=0.242 Sum_probs=106.0
Q ss_pred ccccc-ccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc--ceEEEE
Q 008197 101 GKLLG-HGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV--VKFYNA 177 (574)
Q Consensus 101 ~~~lG-~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni--v~~~~~ 177 (574)
...|| .|+.|+||.+.. .+..+|||.+.......+... .+.. ........+.+|+.++..|. |++| +..+++
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~-~~~~-~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~ 110 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSK-DRYL-FTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAA 110 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhh-hccc-ccchhhhHHHHHHHHHHHHH-hCCCCCceeEee
Confidence 34677 788888888864 477899999875433222111 0000 11234467889999999995 8775 677776
Q ss_pred EEcC-C---EEEEEEeccCC-CchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 178 FEDD-N---YVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 178 ~~~~-~---~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
.... . ..++||||++| .+|.+.+. ..++++. .+.+|+.+|.+||++||+||||||+|||++. ++.
T Consensus 111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~---~~~ 180 (239)
T PRK01723 111 RVVRHGLFYRADILIERIEGARDLVALLQ---EAPLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP---DGK 180 (239)
T ss_pred eeeecCcceeeeEEEEecCCCCCHHHHHh---cCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC---CCC
Confidence 4432 2 23599999997 58877662 2345554 3678999999999999999999999999984 568
Q ss_pred eEEEeecccccc
Q 008197 253 LKATDFGLSDFI 264 (574)
Q Consensus 253 vkl~DFG~a~~~ 264 (574)
++|+|||.+...
T Consensus 181 v~LIDfg~~~~~ 192 (239)
T PRK01723 181 FWLIDFDRGELR 192 (239)
T ss_pred EEEEECCCcccC
Confidence 999999988753
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.6e-17 Score=177.04 Aligned_cols=260 Identities=24% Similarity=0.379 Sum_probs=202.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.+.+.+.+-.|+++.++.+.-..+|...++|+..... ++.....+....+-.++-.. .+|.++...
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap------------~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~ 870 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAP------------KIRTNDYESIRSKSNILITP-RSPAVVRSF 870 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccch------------hhccccccccCCccCccccC-CCCceeccc
Confidence 45777889999999999999877788777777665431 11112233344444443323 356666655
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
--+......+||++|+.|++|...+. ..+..+.+-++.++..+..++++||...++|||++|.|+|.. ..++.++
T Consensus 871 ~s~~~rsP~~L~~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh~~l 945 (1205)
T KOG0606|consen 871 PSFPCRSPLPLVGHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGHRPL 945 (1205)
T ss_pred CCCCCCCCcchhhHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCCccc
Confidence 55566778999999999999998773 445788888999999999999999999999999999999988 5889999
Q ss_pred EeeccccccCC----------C----------------------CCccccccCccccchHhhhc-CCCCCcchHhHHHHH
Q 008197 256 TDFGLSDFIKP----------G----------------------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVIT 302 (574)
Q Consensus 256 ~DFG~a~~~~~----------~----------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il 302 (574)
.|||......- . .......||+.|.+||.+.+ ..+..+|+|++|+++
T Consensus 946 ~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen 946 TDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCL 1025 (1205)
T ss_pred CccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhh
Confidence 99984322110 0 01123589999999998765 458899999999999
Q ss_pred HHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHH---HHhcCccccccC
Q 008197 303 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGG 374 (574)
Q Consensus 303 ~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~---~~l~hp~~~~~~ 374 (574)
+|.++|.+||...+...++.+|......++.-+ ...+.++++++.++|..+|.+|..+. ++-.||||+...
T Consensus 1026 ~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred hhhhcCCCCCCCcchhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCC
Confidence 999999999999999999999988776554432 24678899999999999999999887 888999999764
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.1e-16 Score=139.57 Aligned_cols=140 Identities=26% Similarity=0.407 Sum_probs=116.6
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+.++..++..+.+-|.. ...+|.++.++|+.++...++.......++.+|+.+|.|+||.|+|.||+..+........
T Consensus 21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~ 98 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL 98 (193)
T ss_pred cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence 56888888888888886 4568999999999999877777777888999999999999999999999988776544332
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C-------------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G-------------SIDPLLEEADIDKDGRISLSEFRRL 550 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~-------------~~~~~~~~~D~d~dG~i~~~EF~~~ 550 (574)
.+++.-+|++||.||+|+|+.+|+..++... + -++.+|+.+|.|+||.||++||+..
T Consensus 99 ------eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 99 ------EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred ------HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 2356668999999999999999998766422 1 1788999999999999999999998
Q ss_pred HHhcc
Q 008197 551 LRTAS 555 (574)
Q Consensus 551 ~~~~~ 555 (574)
.....
T Consensus 173 ~~~d~ 177 (193)
T KOG0044|consen 173 CKADP 177 (193)
T ss_pred hhhCH
Confidence 87543
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.4e-16 Score=138.04 Aligned_cols=133 Identities=29% Similarity=0.357 Sum_probs=110.5
Q ss_pred ecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC-CCcceEEEEE
Q 008197 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAF 178 (574)
Q Consensus 100 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h-pniv~~~~~~ 178 (574)
+.+.||.|.++.||++... +..++||.+.... ....+..|+.+++.+.++ +++++++.++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~-----------------~~~~~~~e~~~~~~l~~~~~~~p~~~~~~ 62 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSRE-----------------KGADREREVAILQLLARKGLPVPKVLASG 62 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCC-----------------chhHHHHHHHHHHHHHHcCCCCCeEEEEc
Confidence 4577999999999999864 3789999876541 035688999999999644 6899999999
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCEeecCCCCcEEEccCCCCCCeEE
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
...+..+++|||++|+.+... +......++.+++.+|.+||.. +++|+||+|+||+++. .+.+++
T Consensus 63 ~~~~~~~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~---~~~~~l 130 (155)
T cd05120 63 ESDGWSYLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD---GKILGI 130 (155)
T ss_pred CCCCccEEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC---CcEEEE
Confidence 888899999999988776432 5566778899999999999985 6999999999999983 678999
Q ss_pred Eeeccccc
Q 008197 256 TDFGLSDF 263 (574)
Q Consensus 256 ~DFG~a~~ 263 (574)
+|||.+..
T Consensus 131 ~Df~~~~~ 138 (155)
T cd05120 131 IDWEYAGY 138 (155)
T ss_pred EecccccC
Confidence 99998864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.7e-16 Score=160.68 Aligned_cols=259 Identities=25% Similarity=0.314 Sum_probs=197.2
Q ss_pred cccceeecccccc--cCCeEEEEEEE--cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 94 FDRRYTIGKLLGH--GQFGYTYVATD--KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 94 ~~~~y~~~~~lG~--G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
+...+.+...+|. |.+|.||.+.. ..++..+|+|.-+.... .+.....-.+|+...+.+..|+
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-------------~p~~~~~k~~~~~s~~~i~~~~ 178 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-------------PPLDSKRKLREFLSHHKIDSHE 178 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-------------CccccccccchhhcccccCccc
Confidence 4557888899999 99999999988 88899999997332100 0011122346666667777799
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHH----HHHHHHHCCCEeecCCCCcEEEc
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR----VAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~----~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
+.++.+..++..+..|+-+|+| +.+|..+... ....++...++.++.+... ||.++|..+++|-|+||+||++.
T Consensus 179 ~~v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~ 256 (524)
T KOG0601|consen 179 NPVRDSPAWEGSGILFIQTELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT 256 (524)
T ss_pred cccccCcccccCCcceeeeccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc
Confidence 9999999999999999999999 5677776533 3455889999999999999 99999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCc------cccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKF------QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 319 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~ 319 (574)
. +...++++|||+...+.+.... ....|...|++||+.++-++...|++|+|.++.+-.++..+........
T Consensus 257 ~--~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~ 334 (524)
T KOG0601|consen 257 S--DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS 334 (524)
T ss_pred c--ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC
Confidence 4 2278999999998877654421 2236778899999999999999999999999999988776654331111
Q ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 320 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
+..+-... .+.......+.++...+..|+..+|..|+++..++.|+++..
T Consensus 335 -W~~~r~~~--ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 335 -WSQLRQGY--IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred -cccccccc--CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 11110000 111222345566777999999999999999999999999874
|
|
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-15 Score=133.88 Aligned_cols=127 Identities=26% Similarity=0.373 Sum_probs=111.8
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
-..+...|...|+|+.|.|+.+||+.+|...-....+.+.++.|+..+|.+.+|+|+|+||..++..+..+
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~W--------- 126 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQW--------- 126 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH---------
Confidence 34678889999999999999999999996545567788999999999999999999999999988655433
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccCc------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~------~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+.+|+.||+|++|.|+..||+.+|..+|- .+.+++.+|.-++|.|.|++|+.++-.
T Consensus 127 ---r~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 127 ---RNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV 188 (221)
T ss_pred ---HHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH
Confidence 44999999999999999999999999993 788899999887999999999988743
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-13 Score=127.03 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=105.9
Q ss_pred cccccccCCeEEEEEEEcC------CCCEEEEEEeccchhhhhhhh--h-hhhhc----cchhhHHH----HHHHHHHHH
Q 008197 101 GKLLGHGQFGYTYVATDKA------NGDRVAVKKIEKNKILIRVVS--F-QDLKM----ILPIAVED----VKREVKILQ 163 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~------~~~~vaiK~~~~~~~~~~~~~--~-~~~~~----~~~~~~~~----~~~E~~il~ 163 (574)
...||.|.-+.||.|.... .+..+|||+++.......... . ++... ........ ..+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999997543 357999999875432111100 0 01100 00112223 348999999
Q ss_pred HhcCC-CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCEeecCCCCc
Q 008197 164 ALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPEN 241 (574)
Q Consensus 164 ~l~~h-pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~L-H~~~iiHrDlkp~N 241 (574)
++... -+++.++++ ..-+|||||+.++.+....+ +...+++..+..++.+++.+|..| |..||||+||+|.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L--kd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL--KDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh--hccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 98633 567777765 44689999997654432222 123456677788899999999998 89999999999999
Q ss_pred EEEccCCCCCCeEEEeecccccc
Q 008197 242 FLFKSAKEDSSLKATDFGLSDFI 264 (574)
Q Consensus 242 ill~~~~~~~~vkl~DFG~a~~~ 264 (574)
||+. ++.+.|+|||.|...
T Consensus 156 IL~~----~~~v~iIDF~qav~~ 174 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSVEP 174 (197)
T ss_pred EEEE----CCcEEEEECCCceeC
Confidence 9997 467999999988654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-13 Score=144.60 Aligned_cols=154 Identities=19% Similarity=0.239 Sum_probs=98.2
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhh-------------------hhhhccchhhHH------HHH
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSF-------------------QDLKMILPIAVE------DVK 156 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~------~~~ 156 (574)
+.||.|++|.||+|+. .+|+.||||+.++.....-.... -+.......... .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5799999999999985 47999999998765211000000 000001111111 245
Q ss_pred HHHHHHHHhc----CCCCcceEEEEE-EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHH-HHHHHHHC
Q 008197 157 REVKILQALA----GHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR-VAAECHLH 230 (574)
Q Consensus 157 ~E~~il~~l~----~hpniv~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~-~l~~LH~~ 230 (574)
+|...+.++. ++|++ .+-.++ ...+..+|||||++|++|.+....... ... ...++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhC
Confidence 5666555553 34443 222222 224457999999999999876532211 122 3345555555 47889999
Q ss_pred CCEeecCCCCcEEEccCCCCCCeEEEeecccccc
Q 008197 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264 (574)
Q Consensus 231 ~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~ 264 (574)
|++|+|++|.||+++ .++.++|+|||++..+
T Consensus 277 g~~H~D~hPgNilv~---~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 277 GFFHADLHPGNIFVL---KDGKIIALDFGIVGRL 307 (437)
T ss_pred CceeCCCCcccEEEC---CCCcEEEEeCCCeeEC
Confidence 999999999999997 4688999999998654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.9e-14 Score=148.32 Aligned_cols=161 Identities=19% Similarity=0.264 Sum_probs=98.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhh-----hhhh---------hh-----hhhccchhhHHHHHH
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILI-----RVVS---------FQ-----DLKMILPIAVEDVKR 157 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~---------~~-----~~~~~~~~~~~~~~~ 157 (574)
.|.. +.||.|++|+||+|+.+.+|+.||||++++..... .... .. +.........+.+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 78999999999999988889999999998752110 0000 00 000011122233334
Q ss_pred ------HHHHHHHhc---CCCCcceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhcCC----CCCHHHHHHHHHHHHHH
Q 008197 158 ------EVKILQALA---GHENVVKFYNAFED-DNYVYIAMELCEGGELLDRILAKKDS----RYTEKDAAVVVRQMLRV 223 (574)
Q Consensus 158 ------E~~il~~l~---~hpniv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~----~l~~~~~~~i~~qi~~~ 223 (574)
|+..+.++. .+...+.+-.+|.+ .+..+|||||+.|+++.+.-.....+ .+.+..+..++.|++
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-- 277 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-- 277 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH--
Confidence 444444432 13333443343332 45578999999999997642112212 244444555555554
Q ss_pred HHHHHHCCCEeecCCCCcEEEccC-CCCCCeEEEeeccccccC
Q 008197 224 AAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIK 265 (574)
Q Consensus 224 l~~LH~~~iiHrDlkp~Nill~~~-~~~~~vkl~DFG~a~~~~ 265 (574)
..|++|+|+||.||+++.+ ...+.++++|||++..+.
T Consensus 278 -----~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 -----RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -----hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 5999999999999999842 122489999999987654
|
|
| >KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-13 Score=131.60 Aligned_cols=135 Identities=27% Similarity=0.408 Sum_probs=116.0
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
...++...+++.+|+.||.+++|+|+..++.+++.+ ++.. +..+-+..+|+.+|.|.||.+||.||...+..
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~-l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~------ 79 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEK-LDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN------ 79 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHh-cCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH------
Confidence 345666678999999999999999999999999965 5444 77788899999999999999999999865432
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
. +.++..+|...|.++||.|..+|+...+..+| ++..+|+.+|.|+++.|+++||.+.+.-..
T Consensus 80 ~-----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 80 K-----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP 148 (463)
T ss_pred h-----HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC
Confidence 1 23677799999999999999999999999888 378899999999999999999999987544
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-13 Score=130.35 Aligned_cols=136 Identities=30% Similarity=0.417 Sum_probs=106.4
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
+.+-++.|+..|.|+||.++.+||..+|...-.-.+..--|..-+..+|+|+||+|+++||+.-|..... .....+|.
T Consensus 162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~--~~~epeWv 239 (325)
T KOG4223|consen 162 IARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG--NEEEPEWV 239 (325)
T ss_pred HHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC--CCCCcccc
Confidence 4456778999999999999999999998653333344556788889999999999999999988765433 22334454
Q ss_pred HHHH-HHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 495 LRSQ-AAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 495 ~~~~-~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..-+ ..|...|+|+||+|+.+|++..+...+ ++.-++.++|.|+||++|++|.+.-.-
T Consensus 240 ~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d 304 (325)
T KOG4223|consen 240 LTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHYD 304 (325)
T ss_pred cccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhCcc
Confidence 3333 345566999999999999998776655 478899999999999999999886543
|
|
| >KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.6e-13 Score=128.53 Aligned_cols=140 Identities=26% Similarity=0.350 Sum_probs=111.7
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc-------
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------- 485 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~------- 485 (574)
+..+++..+|..+|.++||.|+..|+..++.... ......++.+-+..+|.|.||.|+|+|++..+......
T Consensus 74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~-k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~ 152 (325)
T KOG4223|consen 74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQ-KKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDE 152 (325)
T ss_pred hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccc
Confidence 3557889999999999999999999999996632 33445677888899999999999999999887753211
Q ss_pred -cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 486 -EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 486 -~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..........+-++-|+..|.|+||.++++||...++... -|.+.|..+|+||||+|+++||+.=|-.
T Consensus 153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~ 228 (325)
T KOG4223|consen 153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS 228 (325)
T ss_pred hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence 0111122334456789999999999999999999887654 2788999999999999999999977754
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.1e-14 Score=135.11 Aligned_cols=203 Identities=17% Similarity=0.181 Sum_probs=141.5
Q ss_pred HHHHHHhcCCCCcceEEEEEEcC-----CEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 008197 159 VKILQALAGHENVVKFYNAFEDD-----NYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH- 230 (574)
Q Consensus 159 ~~il~~l~~hpniv~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~- 230 (574)
..-|-++ .|.|||+++.||.+. ....++.||+..|++..+|.+. ....+......+|+.||+.||.|||+.
T Consensus 118 Fdnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 118 FDNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 3444555 399999999998754 3588999999999999988543 345688999999999999999999987
Q ss_pred -CCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCC------CCccccccCccccchHhhhc-CCCCCcchHhHHHHH
Q 008197 231 -GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVIT 302 (574)
Q Consensus 231 -~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~------~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il 302 (574)
-|+|+.+..+-|++. .++-+|+.----. ..... .....-.|-++|.|||.=.. ..+.++|||++|+..
T Consensus 197 PpiihgnlTc~tifiq---~ngLIkig~~ap~-s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQ---HNGLIKIGSVAPD-STHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred CccccCCcchhheeec---CCceEEecccCcc-ccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 599999999999998 4677775321111 11100 01112356788999986432 346689999999999
Q ss_pred HHHHhCCCCC-CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 303 YILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 303 ~elltg~~Pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.+|..+..-- ...+.-..-..+.+...... ..--+.++.+||+..|..||++.+++-||.+-+.
T Consensus 273 lemailEiq~tnseS~~~~ee~ia~~i~~le-------n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 273 LEMAILEIQSTNSESKVEVEENIANVIIGLE-------NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred HHHHHheeccCCCcceeehhhhhhhheeecc-------CccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence 9999876642 22222222222222111100 0112468899999999999999999999987653
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-13 Score=121.42 Aligned_cols=129 Identities=19% Similarity=0.202 Sum_probs=95.4
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED 180 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~ 180 (574)
++.|+.|.++.||++.. .+..|++|....... ....+..|+.+++.+.+...+++++.....
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----------------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~ 64 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----------------LLINRENEAENSKLAAEAGIGPKLYYFDPE 64 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----------------cccCHHHHHHHHHHHHHhCCCCceEEEeCC
Confidence 35689999999999975 377899998754310 112457899999998633334566655432
Q ss_pred CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----EeecCCCCcEEEccCCCCCCeEE
Q 008197 181 DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL-----VHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 181 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i-----iHrDlkp~Nill~~~~~~~~vkl 255 (574)
..++||||++|.++.+. . .....++.+++.+|..||..++ +|+|++|.||+++ ++.++|
T Consensus 65 --~~~lv~e~i~G~~l~~~-------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~l 128 (170)
T cd05151 65 --TGVLITEFIEGSELLTE-------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWL 128 (170)
T ss_pred --CCeEEEEecCCCccccc-------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEE
Confidence 34799999999887542 0 1123467899999999999985 9999999999998 457999
Q ss_pred Eeeccccc
Q 008197 256 TDFGLSDF 263 (574)
Q Consensus 256 ~DFG~a~~ 263 (574)
+|||.+..
T Consensus 129 iDf~~a~~ 136 (170)
T cd05151 129 IDWEYAGM 136 (170)
T ss_pred EecccccC
Confidence 99998864
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.4e-12 Score=112.28 Aligned_cols=155 Identities=19% Similarity=0.225 Sum_probs=116.7
Q ss_pred ecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 100 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
.+.+|-+|+-+.|+++. ..|+...||.=.......+. ........+..+|+++|.++. --.|.-..-++.
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~-------LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~ 80 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPA-------LDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFI 80 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchH-------HHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEE
Confidence 45678899999999995 67888888854333221111 112245667889999999885 456655555667
Q ss_pred cCCEEEEEEeccCC-CchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 180 DDNYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 180 ~~~~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
+...-.|+|||++| .++.+++...............++..|-..+.-||.++|||+||.++||++.+++....+.|+||
T Consensus 81 D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdf 160 (229)
T KOG3087|consen 81 DTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDF 160 (229)
T ss_pred ecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEee
Confidence 77777899999987 46777776655555555555789999999999999999999999999999998777777899999
Q ss_pred cccccc
Q 008197 259 GLSDFI 264 (574)
Q Consensus 259 G~a~~~ 264 (574)
|++...
T Consensus 161 gls~~s 166 (229)
T KOG3087|consen 161 GLSSVS 166 (229)
T ss_pred cchhcc
Confidence 998653
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.3e-13 Score=137.03 Aligned_cols=251 Identities=18% Similarity=0.162 Sum_probs=182.3
Q ss_pred ccceeecccccccCCeEEEEEEEc-CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+|..+..||.|.|+.|+.+..+ .++..|++|.+..... .......-..|+-+...+.-|.+++.
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~-------------~~~~di~sl~ev~l~~~l~~~~~~~g 330 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLA-------------TFASDIFSLGEVILEAILGSHLPSVG 330 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhcccc-------------chHhhhcchhhhhHhhHhhcccccCC
Confidence 346888999999999999998755 6778999998765421 01112223556666666667999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
.+..|......||-.|||+++++...+ .....+.+...+.+..|++.++.++|+..++|+|+||+||++... .+..
T Consensus 331 ~~~~W~~~r~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~~~~ 406 (524)
T KOG0601|consen 331 KNSSWSQLRQGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--GFFS 406 (524)
T ss_pred CCCCccccccccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--hhhh
Confidence 999888888888999999999876554 333457888899999999999999999999999999999999842 2788
Q ss_pred EEEeeccccccCCCCCccccccCccccc-hHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVA-PEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~a-PE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
++.|||.+..+.- ......++-++.| +|++... +..+.|++|||..+.+.++|.+.-+.... ...|..+..
T Consensus 407 ~~~~~~~~t~~~~--~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~- 480 (524)
T KOG0601|consen 407 KLGDFGCWTRLAF--SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDT- 480 (524)
T ss_pred hccccccccccce--ecccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccc-
Confidence 9999998753211 1112233445553 6655543 37889999999999999998665433221 222222221
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
+..+..+.++..+.+.++..++..||++.++..|+=|.
T Consensus 481 ---p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 481 ---PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ---cCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 12234557788999999999999999999988876553
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.5e-11 Score=107.59 Aligned_cols=140 Identities=24% Similarity=0.303 Sum_probs=101.1
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcC
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD 181 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~ 181 (574)
..+++|+-+.+|.+.. -|..+++|.=.+... +. .........++..+|..++..+. --.|...+-+..+.
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~Y--R~-----p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~ 71 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRY--RH-----PELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDP 71 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCccc--CC-----hHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcC
Confidence 4688999999999953 455666775333211 11 01111234566788999999885 44565555556677
Q ss_pred CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccc
Q 008197 182 NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a 261 (574)
+...|+|||++|..|.+.+... ...++..+-.-+.-||.+||||+||.++||++. ++.+.++||||+
T Consensus 72 ~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg 138 (204)
T COG3642 72 DNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLG 138 (204)
T ss_pred CCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcc
Confidence 7788999999988877777332 255677777788899999999999999999998 455999999999
Q ss_pred ccc
Q 008197 262 DFI 264 (574)
Q Consensus 262 ~~~ 264 (574)
.+.
T Consensus 139 ~~s 141 (204)
T COG3642 139 EFS 141 (204)
T ss_pred ccc
Confidence 754
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.8e-11 Score=125.11 Aligned_cols=183 Identities=19% Similarity=0.258 Sum_probs=133.1
Q ss_pred ceeecccccccCCeEEE-EEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 97 RYTIGKLLGHGQFGYTY-VATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy-~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.|.+ ...+-++.+ || .|..+.++.+|.|..++... ....+.+.+-++-|+.|+ ||||++++
T Consensus 14 pY~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~---------------~~~~~~~~~A~k~lKtlR-HP~Il~yL 75 (690)
T KOG1243|consen 14 PYDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSN---------------GEVTELAKRAVKRLKTLR-HPNILSYL 75 (690)
T ss_pred Cccc-ccccCCCcc-cccccceeccCCceEEEEEeCCC---------------chhhHHHHHHHHHhhhcc-Cchhhhhh
Confidence 3555 434444444 34 45667888999999886541 123456777888899996 99999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+.++..+.+|||+|.+. .|..++.. ++...+...+.||+.||.||| ..+++|++|..+.|+++ ..|..|
T Consensus 76 ~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn---~~GeWk 145 (690)
T KOG1243|consen 76 DTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN---ESGEWK 145 (690)
T ss_pred hhhcccCceEEEeeccc--cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc---CCCcEE
Confidence 99999999999999985 55556632 347788889999999999998 56899999999999999 589999
Q ss_pred EEeeccccccCCCCC-ccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 308 (574)
Q Consensus 255 l~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg 308 (574)
|++|-++........ .....---.|..|+.+... .-..|.|-|||++++++.|
T Consensus 146 Lggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 146 LGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred EeeeEEEeccccCCcccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCc
Confidence 999998765432221 1111112235556543221 1246999999999999998
|
|
| >KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-12 Score=114.05 Aligned_cols=117 Identities=25% Similarity=0.263 Sum_probs=95.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc-----cch
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE-----HDS 490 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~-----~~~ 490 (574)
.-...+|..||.|+||.|+..||..++.. +.....++.+.+.|+.||.|+||.|+++|++.++.....+.. ...
T Consensus 64 ~y~~~vF~~fD~~~dg~i~F~Efi~als~-~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~ 142 (193)
T KOG0044|consen 64 KYAELVFRTFDKNKDGTIDFLEFICALSL-TSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDE 142 (193)
T ss_pred HHHHHHHHHhcccCCCCcCHHHHHHHHHH-HcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCccc
Confidence 45577899999999999999999999954 556667889999999999999999999999998876655433 223
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHH
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 533 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 533 (574)
......+..+|+.+|.|+||.||.+||.........+-.++..
T Consensus 143 ~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~~ 185 (193)
T KOG0044|consen 143 ETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALEQ 185 (193)
T ss_pred ccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhhh
Confidence 3356678899999999999999999999988776655555543
|
|
| >KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-11 Score=102.71 Aligned_cols=136 Identities=21% Similarity=0.346 Sum_probs=97.8
Q ss_pred ccchHHhhhhccccccccCC-------C----CCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHH
Q 008197 409 TLDDEELADLRDQFDAIDVD-------K----NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d-------~----~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~ 477 (574)
-++..++-++...|..+-++ + .-.+..+.+.+.= .+..+| .-++|...+..||+|.++|++|+.
T Consensus 21 FFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMP--ELkenp---fk~ri~e~FSeDG~GnlsfddFlD 95 (189)
T KOG0038|consen 21 FFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMP--ELKENP---FKRRICEVFSEDGRGNLSFDDFLD 95 (189)
T ss_pred cccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhCh--hhhcCh---HHHHHHHHhccCCCCcccHHHHHH
Confidence 34555555555555554322 1 1134444443321 233343 345666777789999999999999
Q ss_pred HHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHH
Q 008197 478 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSE 546 (574)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~E 546 (574)
+++....+.+ ...++..||+++|-|+|++|..++|...+..+. -++.+++++|.||||+|+|.|
T Consensus 96 mfSV~sE~AP-----rdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~e 170 (189)
T KOG0038|consen 96 MFSVFSEMAP-----RDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAE 170 (189)
T ss_pred HHHHHHhhCh-----HHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHH
Confidence 9887765544 235788899999999999999999998887654 178899999999999999999
Q ss_pred HHHHHHhc
Q 008197 547 FRRLLRTA 554 (574)
Q Consensus 547 F~~~~~~~ 554 (574)
|..++.++
T Consensus 171 Fe~~i~ra 178 (189)
T KOG0038|consen 171 FEHVILRA 178 (189)
T ss_pred HHHHHHhC
Confidence 99999864
|
|
| >PLN02964 phosphatidylserine decarboxylase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-11 Score=130.82 Aligned_cols=105 Identities=21% Similarity=0.296 Sum_probs=88.7
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC-CCccHHH---HHHHHHhhcCCCCcceehhchHHHHhhhh
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLHVH 483 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~-~~~~~~~---~~~~~~~~D~d~dg~I~f~EF~~~~~~~~ 483 (574)
..+...++++++++|+.+|+|++|.| +..++ +.+| ..+++.+ ++++|+.+|.|++|.|+|+||+.++....
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~il-rslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg 209 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIF-VSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG 209 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHH-HHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc
Confidence 35677788999999999999999997 77777 5688 5888876 89999999999999999999999886432
Q ss_pred cccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcc
Q 008197 484 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 484 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 523 (574)
. ... .+++..+|+.||+|++|+|+.+||+.++..
T Consensus 210 ~---~~s---eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 N---LVA---ANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred c---CCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1 111 236888999999999999999999998876
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-09 Score=110.18 Aligned_cols=214 Identities=18% Similarity=0.244 Sum_probs=153.8
Q ss_pred CCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEc----CCE
Q 008197 108 QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFED----DNY 183 (574)
Q Consensus 108 ~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~----~~~ 183 (574)
--.+.|++....+|..|++|.++..+. ........-+++++++ .|+|||++.++|.. +..
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~---------------~~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~S 351 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRD---------------QSTNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLS 351 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccc---------------cCcccchHHHHHHHHh-ccCceeehhhhhhhhccCcce
Confidence 455789999999999999999854321 0111223456788899 59999999999873 557
Q ss_pred EEEEEeccCC-CchHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 184 VYIAMELCEG-GELLDRILAKK-------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 184 ~~lv~e~~~g-g~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
+++|++|+++ ++|+++..... +...++..+|.++.||..||.++|+.|+.-+-|.|.+||++.
T Consensus 352 lvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G--- 428 (655)
T KOG3741|consen 352 LVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTG--- 428 (655)
T ss_pred EEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeC---
Confidence 9999999985 57777654321 234678999999999999999999999999999999999983
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH--HHHHHhC
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI--FKEVLRN 327 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~--~~~i~~~ 327 (574)
+..++|.-.|....+.+... +| +. .-.+-|.=.||.+++.|.||..--+..+.... ...|
T Consensus 429 ~~RIriS~C~i~Dvl~~d~~-----------~~--le--~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I--- 490 (655)
T KOG3741|consen 429 KMRIRISGCGIMDVLQEDPT-----------EP--LE--SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI--- 490 (655)
T ss_pred cceEEEecccceeeecCCCC-----------cc--hh--HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh---
Confidence 45888888887766544330 00 10 12346888999999999999665333322211 1122
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.+.++.+++++|.-+...++.. -++.+++.+
T Consensus 491 --------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 491 --------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred --------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 1356788999999888888875 566776553
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-10 Score=110.17 Aligned_cols=240 Identities=19% Similarity=0.211 Sum_probs=159.6
Q ss_pred eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE-
Q 008197 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA- 177 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~- 177 (574)
..++.||+|+-+.+|..-.- ...+.|++.+... .. -...+..|.....||-+-.-+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Ppp---------------a~---~aqk~a~la~~p~~p~~~~rvaWP 72 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPP---------------AA---QAQKVAELAATPDAPLLNYRVAWP 72 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCc---------------hH---HHHHHHHhccCCCCcchhhhhccc
Confidence 45678999999999976322 2335688876521 11 11223334444455544331111
Q ss_pred -----EEc-CCEEEEEEeccCCCchHHHHH-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 178 -----FED-DNYVYIAMELCEGGELLDRIL-----AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 178 -----~~~-~~~~~lv~e~~~gg~L~~~l~-----~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
.-+ .....++|..++|..=-..+. ++....+.+....+.++.|+.+...||.+|.+-+|+.++|+|+.
T Consensus 73 qa~L~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs- 151 (637)
T COG4248 73 QATLHGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS- 151 (637)
T ss_pred HHHhhCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee-
Confidence 112 223778888887652222221 12234467889999999999999999999999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCCCccccccCccccchHhhh-c-----CCCCCcchHhHHHHHHHHHhC-CCCCCCCC---
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-R-----KSGPESDVWSIGVITYILLCG-RRPFWDKT--- 316 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~-----~~~~~~DvwSlG~il~elltg-~~Pf~~~~--- 316 (574)
+++.|.|+|-..-.....+..+...+|.+.|.+||.-. + .-+...|.|.||+++|+++.| +.||.+-.
T Consensus 152 --d~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~ 229 (637)
T COG4248 152 --DDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLIS 229 (637)
T ss_pred --cCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccC
Confidence 57889999866554445566677789999999999865 2 125668999999999999986 99996531
Q ss_pred -hhHHHH-HHHhC------------CCCCCCCCCCCCCHHHHHHHHHcccc--CCCCCCCHH
Q 008197 317 -EDGIFK-EVLRN------------KPDFRRKPWPSISNSAKDFVKKLLVK--DPRARLTAA 362 (574)
Q Consensus 317 -~~~~~~-~i~~~------------~~~~~~~~~~~~~~~~~~li~~~L~~--dp~~Rps~~ 362 (574)
...-++ .|..+ ++.....+|.-+++++..+..+|+.. ++.-|||++
T Consensus 230 ~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 230 DAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred CCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 111111 22221 11222334667889999999999985 356899975
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.8e-10 Score=107.81 Aligned_cols=143 Identities=29% Similarity=0.438 Sum_probs=103.6
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC-CCCcceEEEEEEc
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG-HENVVKFYNAFED 180 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~-hpniv~~~~~~~~ 180 (574)
+.||.|..+.||++... +|..+++|....... ......+..|+.+++.+.. +..+++++.+...
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~--------------~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~ 68 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGAL--------------LPSAHDVAREYRVLRALAGTGVPVPKVLALCED 68 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCccc--------------CcccccHHHHHHHHHHhhCCCCCCCCEEEECCC
Confidence 56899999999999853 368899998765311 0123467899999999963 2346777777665
Q ss_pred C---CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------
Q 008197 181 D---NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---------------------------- 229 (574)
Q Consensus 181 ~---~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---------------------------- 229 (574)
. +..++||||++|.++.+.+.. ..+++.....++.+++.+|..||+
T Consensus 69 ~~~~~~~~~v~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (223)
T cd05154 69 PSVLGTPFYVMERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQ 145 (223)
T ss_pred CCccCCceEEEEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHH
Confidence 4 367899999999887664321 346666777777777777777773
Q ss_pred ----------------------------CCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 230 ----------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 230 ----------------------------~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
..++|+|+.|.||+++.. ..+.+.|+||+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~ 206 (223)
T cd05154 146 YDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL 206 (223)
T ss_pred HHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence 236999999999999841 135688999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-10 Score=87.99 Aligned_cols=55 Identities=47% Similarity=0.733 Sum_probs=50.0
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC----------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
++++|+.+|+|++|+|+.+||+.++...+ .+..+|+.+|+|+||.|+|+||+.+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 56799999999999999999999998776 26667999999999999999999886
|
... |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.2e-11 Score=93.35 Aligned_cols=69 Identities=25% Similarity=0.408 Sum_probs=61.9
Q ss_pred HHhhhhccccccccC-CCCCCcCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~-d~~G~i~~~El~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..|.++|..||. +++|+|+..||+.+|...+|...+. .+++++|+.+|.|+||.|+|+||+.++..
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456789999999999 9999999999999996658877777 89999999999999999999999987754
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13 | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.4e-10 Score=90.73 Aligned_cols=61 Identities=16% Similarity=0.267 Sum_probs=54.8
Q ss_pred HHHHHHHHHhcCC-CCCCcccHHHHHHhhcc-cC-------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDI-DRDGFITPEELRMHTGL-KG-------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~-d~~G~I~~~El~~~l~~-~~-------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.||+ +++|+|+.+||+.++.. +| +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3568889999999 99999999999998877 55 38899999999999999999999999763
|
S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu |
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.07 E-value=1e-09 Score=100.78 Aligned_cols=142 Identities=23% Similarity=0.256 Sum_probs=85.9
Q ss_pred EEEEEEEcCCCCEEEEEEeccchhhhhhhh----hhh-------hhccchhhHHHHHHHHHHHHHhcCC-CCcceEEEEE
Q 008197 111 YTYVATDKANGDRVAVKKIEKNKILIRVVS----FQD-------LKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAF 178 (574)
Q Consensus 111 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~E~~il~~l~~h-pniv~~~~~~ 178 (574)
.||.|.. ..|..+|||+.+......+... ... .............+|.+.|.++... -++++++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3899985 5678999999876532211100 000 0112233455678999999999633 2577777553
Q ss_pred EcCCEEEEEEeccC--CCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH-HHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 179 EDDNYVYIAMELCE--GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 179 ~~~~~~~lv~e~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~-LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
. -+|||||++ |..+.. +... .++......++.+++..+.. +|..||+|+||.+.|||++ .+.+.|
T Consensus 80 --~--~~ivME~I~~~G~~~~~-l~~~---~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~~~~i 147 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPLPR-LKDV---DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DGKVYI 147 (188)
T ss_dssp --T--TEEEEE--EETTEEGGC-HHHC---GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TTCEEE
T ss_pred --C--CEEEEEecCCCccchhh-HHhc---cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cceEEE
Confidence 2 379999998 555433 3221 12245567788888885555 6899999999999999998 348999
Q ss_pred EeeccccccC
Q 008197 256 TDFGLSDFIK 265 (574)
Q Consensus 256 ~DFG~a~~~~ 265 (574)
+|||.|....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999886543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.5e-10 Score=87.45 Aligned_cols=62 Identities=32% Similarity=0.575 Sum_probs=52.7
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCcc----HHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~----~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
+|+++|..+|.|++|+|+.+||..++.. ++...+ .+.++.+|+.+|.|+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKH-LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH-TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHH-hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4788999999999999999999999955 665443 4566667999999999999999998754
|
... |
| >KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.3e-10 Score=101.07 Aligned_cols=93 Identities=27% Similarity=0.454 Sum_probs=80.9
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
-++.|+.+|..+|.|++|.|+..||..+|. .+|+..+.+..+.+++.+|.-++|.|.|++|+.++....
T Consensus 122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~-~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~---------- 190 (221)
T KOG0037|consen 122 YINQWRNVFRTYDRDRSGTIDSSELRQALT-QLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ---------- 190 (221)
T ss_pred HHHHHHHHHHhcccCCCCcccHHHHHHHHH-HcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH----------
Confidence 467899999999999999999999999995 599999999999999999988899999999998876542
Q ss_pred HHHHHHHHHhcCCCCCCccc--HHHHHH
Q 008197 494 HLRSQAAFEKFDIDRDGFIT--PEELRM 519 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~--~~El~~ 519 (574)
.+.++|+.+|++.+|.|+ .++|..
T Consensus 191 --~lt~~Fr~~D~~q~G~i~~~y~dfl~ 216 (221)
T KOG0037|consen 191 --RLTEAFRRRDTAQQGSITISYDDFLQ 216 (221)
T ss_pred --HHHHHHHHhccccceeEEEeHHHHHH
Confidence 455699999999999865 455543
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.8e-09 Score=101.59 Aligned_cols=151 Identities=27% Similarity=0.297 Sum_probs=112.3
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhh-------hhhccchhhHHHHHHHHHHHHHhcCC-C
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ-------DLKMILPIAVEDVKREVKILQALAGH-E 169 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~E~~il~~l~~h-p 169 (574)
+.++..||-|.-+.||.|.+. .|.++|||.-+......+.+... ....+.-.......+|..+|.+|..+ -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 567889999999999999865 68899999876665444322211 11223345666789999999999533 2
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
.+++.+++ +...+||||++|-.|... ++..+.+..++..|+.-+.-+-..||||+|+.+=||+++ +
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~ 237 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---E 237 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---c
Confidence 56666553 457899999998776542 224566677778888888777799999999999999999 5
Q ss_pred CCCeEEEeeccccc
Q 008197 250 DSSLKATDFGLSDF 263 (574)
Q Consensus 250 ~~~vkl~DFG~a~~ 263 (574)
+|.+.++||=-+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 78999999986643
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.3e-10 Score=119.75 Aligned_cols=152 Identities=22% Similarity=0.279 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCcc----------ccccCccccchHhhhc
Q 008197 219 QMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----------DIVGSAYYVAPEVLKR 287 (574)
Q Consensus 219 qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~----------~~~gt~~y~aPE~~~~ 287 (574)
+++.|+.|+|.. ++||+.|.|++|.++ ..+..||+.|+++....+...+. -..-...|.|||++.+
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~n---a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVN---ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred cccchhhhhccCcceeecccchhheeec---cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 344999999976 899999999999998 58899999999987655422211 1133456999998876
Q ss_pred CC-CCCcchHhHHHHHHHHH-hCCCCCCCCChhHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHHHccccCCCCCCCHHHH
Q 008197 288 KS-GPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQA 364 (574)
Q Consensus 288 ~~-~~~~DvwSlG~il~ell-tg~~Pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rps~~~~ 364 (574)
.. +.++|++|+||++|.+. .|+..+........ ............. .-..+|.++++=|.++|..++..||++..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~-~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l 262 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS-YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLL 262 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch-hhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence 44 78899999999999999 45555544332222 2222211111111 115688999999999999999999999999
Q ss_pred hcCccccccC
Q 008197 365 LSHPWVREGG 374 (574)
Q Consensus 365 l~hp~~~~~~ 374 (574)
+..|||.+..
T Consensus 263 ~~~~ff~D~~ 272 (700)
T KOG2137|consen 263 LSIPFFSDPG 272 (700)
T ss_pred hcccccCCch
Confidence 9999999753
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=99.02 E-value=4e-10 Score=89.63 Aligned_cols=69 Identities=20% Similarity=0.338 Sum_probs=61.1
Q ss_pred HHhhhhcccccccc-CCCCC-CcCHHHHHHHHHh----hCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKNG-SISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~----~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..|+++|..|| .|++| +|+.+||+.+|.. .+|..+++.+++++++.+|.|++|.|+|+||+.++..
T Consensus 5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 34678999999998 89999 5999999999954 2788889999999999999999999999999987653
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=8.6e-09 Score=100.39 Aligned_cols=146 Identities=17% Similarity=0.126 Sum_probs=97.0
Q ss_pred EEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc--ceEEEEEEc-----CCE
Q 008197 111 YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV--VKFYNAFED-----DNY 183 (574)
Q Consensus 111 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni--v~~~~~~~~-----~~~ 183 (574)
.|.++. ..|+.|.||.............+-. .......+.+|...+..|. .-+| +..+.+++. ...
T Consensus 37 rvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~----~~~p~~~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 37 RTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLS----LRMPVLGADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred eEEEEE--ECCEEEEEEEecCCcHHHHhhhhcc----cccccHHHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccce
Confidence 355553 4677899997744321100000000 0011224678998888874 3333 334444432 235
Q ss_pred EEEEEeccCCC-chHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC----CCCCCeEEEee
Q 008197 184 VYIAMELCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----KEDSSLKATDF 258 (574)
Q Consensus 184 ~~lv~e~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~----~~~~~vkl~DF 258 (574)
.+||||++++. +|.+++......+.+......++.+++..+.-||.+||+|+||+|.|||++.. .+...+.|+||
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl 189 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDL 189 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence 78999999876 77777643223456677888999999999999999999999999999999841 34578999999
Q ss_pred ccccc
Q 008197 259 GLSDF 263 (574)
Q Consensus 259 G~a~~ 263 (574)
+.+..
T Consensus 190 ~r~~~ 194 (268)
T PRK15123 190 HRAQI 194 (268)
T ss_pred Ccccc
Confidence 98854
|
|
| >COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.1e-09 Score=92.89 Aligned_cols=108 Identities=20% Similarity=0.298 Sum_probs=84.0
Q ss_pred hhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 405 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 405 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
.+....+.. .+.++|..+|. +.|.|+..+|..+|...+....+.+++.+.|+.||.|+||.|+..|++.++....
T Consensus 48 ~lg~~~s~~---ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg- 122 (160)
T COG5126 48 SLGFNPSEA---EINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLG- 122 (160)
T ss_pred HcCCCCcHH---HHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc-
Confidence 444555554 45566777777 8899999999999987777778889999999999999999999999987765321
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+.. ..+++..+++.+|.|++|.|+.+||.+.+.
T Consensus 123 --e~~---~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 123 --ERL---SDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred --ccC---CHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 111 134677899999999999999999988654
|
|
| >KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-09 Score=106.87 Aligned_cols=147 Identities=25% Similarity=0.314 Sum_probs=108.4
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch----
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS---- 490 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~---- 490 (574)
..+|...|..+|.+++|+|+......++...+|.+..=..+..-+ ...+.||.|.|.+-+..+.......+...
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kl--a~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKL--ANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhc--cCCCcCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 357888899999999999999999999988888776633333222 23456789999888765433221111000
Q ss_pred --HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----------cHHHHHHHhCCCCCCcccHHHHHHHHHhcccCC
Q 008197 491 --EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 558 (574)
Q Consensus 491 --~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~~~ 558 (574)
-.....+..+|+.+|.|++|.|+.+||+.++...+ ++.++-+.+|.|+||.|++.||.++++-.....
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~~ 620 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRRR 620 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcchh
Confidence 01134577899999999999999999998887655 378888999999999999999999998766544
Q ss_pred CCCCC
Q 008197 559 RNVPP 563 (574)
Q Consensus 559 ~~~~~ 563 (574)
....|
T Consensus 621 ~~~~p 625 (631)
T KOG0377|consen 621 STGRP 625 (631)
T ss_pred hcCCC
Confidence 44333
|
|
| >KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=4e-09 Score=94.02 Aligned_cols=98 Identities=26% Similarity=0.281 Sum_probs=83.1
Q ss_pred HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------
Q 008197 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 525 (574)
Q Consensus 452 ~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 525 (574)
..++..+|..+|.|++|.|+-.|+-.++.......+ ..++..+++.+|.|++|.|+.+||..++....
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t------~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT------EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 357889999999999999999999988776544322 23677899999999999999999998876443
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 526 -----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 526 -----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
++.++|+.+|.|+||.|+.+|+..+|....
T Consensus 81 ~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg 115 (151)
T KOG0027|consen 81 EASSEELKEAFRVFDKDGDGFISASELKKVLTSLG 115 (151)
T ss_pred cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC
Confidence 578899999999999999999999998654
|
|
| >cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-09 Score=85.59 Aligned_cols=60 Identities=20% Similarity=0.315 Sum_probs=53.7
Q ss_pred HHHHHHHHHhcC-CCCCC-cccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++++|+.|| +||+| +|+.+||+.++.. .| +++++|+.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 346888999998 89999 5999999999987 55 3899999999999999999999999875
|
S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i |
| >PTZ00183 centrin; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=4e-09 Score=95.02 Aligned_cols=101 Identities=18% Similarity=0.272 Sum_probs=82.8
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
.+..+|..+|.+++|.|+..||..++............++.+|+.+|.+++|.|+.+||...+....... . ...
T Consensus 54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l--~----~~~ 127 (158)
T PTZ00183 54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETI--T----DEE 127 (158)
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCC--C----HHH
Confidence 5678899999999999999999998865444556678899999999999999999999998775432111 1 135
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 523 (574)
+..+|..+|.|++|.|+.+||..++..
T Consensus 128 ~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 128 LQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 777999999999999999999988754
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-09 Score=87.06 Aligned_cols=70 Identities=24% Similarity=0.369 Sum_probs=59.0
Q ss_pred HHhhhhcccccccc-CCCCC-CcCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 413 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..+..+.++|..|| .|++| +|+..||+.++...+ +...+..+++.+++.+|.|+||.|+|+||+.++...
T Consensus 7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 34678899999999 79998 599999999996533 334577899999999999999999999999877543
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.1e-09 Score=87.81 Aligned_cols=72 Identities=22% Similarity=0.361 Sum_probs=64.2
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 483 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~ 483 (574)
.++.+++.+++++|..||.|++|.|+.+||..++.. .| .++++++.++..+|.+++|.|+|+||+.++....
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK-SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 357789999999999999999999999999999955 55 6788999999999999999999999998776543
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.7e-09 Score=84.89 Aligned_cols=69 Identities=20% Similarity=0.367 Sum_probs=61.4
Q ss_pred HHhhhhccccccccC-CC-CCCcCHHHHHHHHHh--hCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDV-DK-NGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~-d~-~G~i~~~El~~~l~~--~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+.+..|.++|..+|. |+ +|+|+.+||+.++.+ .+|..+++++++++|+.+|.|++|.|+|+||+..+..
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 456788999999998 78 899999999999964 3688899999999999999999999999999977653
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.9e-09 Score=93.36 Aligned_cols=112 Identities=21% Similarity=0.234 Sum_probs=89.3
Q ss_pred ccccccccCCCCCC-cCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc-chHHHHHH
Q 008197 419 RDQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-DSEKWHLR 496 (574)
Q Consensus 419 ~~~F~~~D~d~~G~-i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~-~~~~~~~~ 496 (574)
.++|+.||++++|. |+.++|...+.--.+.....+.++-.|+.||.+++|.|+.+|+..++......... ..+.....
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i 148 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI 148 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 45688889999988 99999999996544555556689999999999999999999999887765443222 13345667
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHH
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPL 530 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~ 530 (574)
+..+|..+|.|+||+|+.+|+.+++.....+.+.
T Consensus 149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~~ 182 (187)
T KOG0034|consen 149 VDKTFEEADTDGDGKISFEEFCKVVEKQPDLLEK 182 (187)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHHH
Confidence 8899999999999999999999988776544443
|
|
| >cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.5e-09 Score=84.39 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=52.2
Q ss_pred HHHHHHHHHhcC-CCCCC-cccHHHHHHhhccc------C-----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGLK------G-----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~~------~-----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|..|| +||+| +|+.+||+.++... + +++++|+++|.|+||.|+|+||+.+|..
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 356788999998 89998 59999999998541 1 3999999999999999999999999975
|
S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac |
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.6e-09 Score=85.02 Aligned_cols=68 Identities=28% Similarity=0.404 Sum_probs=58.5
Q ss_pred Hhhhhcccccccc-CCCCCC-cCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 414 ELADLRDQFDAID-VDKNGS-ISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 414 ~~~~l~~~F~~~D-~d~~G~-i~~~El~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.++.++++|..|| .|++|+ |+..||..+|...+ +..++.++++.+|+.+|.|++|.|+|+||+.++..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3467999999997 999995 99999999995433 34578899999999999999999999999987654
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >PTZ00184 calmodulin; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.8e-08 Score=89.70 Aligned_cols=101 Identities=22% Similarity=0.327 Sum_probs=81.6
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
..+..+|..+|.+++|.|+.+||..++...+........+..+|+.+|.+++|.|+.+||..++....... . ..
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~--~----~~ 120 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKL--T----DE 120 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCC--C----HH
Confidence 36788899999999999999999999865444455667889999999999999999999988775432111 1 23
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+|.+++|.|+.+||..++.
T Consensus 121 ~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 121 EVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 566789999999999999999987764
|
|
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.4e-09 Score=85.45 Aligned_cols=68 Identities=26% Similarity=0.391 Sum_probs=59.4
Q ss_pred HhhhhccccccccC-CC-CCCcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 414 ELADLRDQFDAIDV-DK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 414 ~~~~l~~~F~~~D~-d~-~G~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
....++++|..||. |+ +|+|+..||..+|... +|..+++++++.+++.+|.+++|.|+|+||+.++..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 35678999999997 97 6999999999999542 466788999999999999999999999999987754
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif | Back alignment and domain information |
|---|
Probab=98.83 E-value=4.6e-09 Score=84.31 Aligned_cols=70 Identities=26% Similarity=0.434 Sum_probs=60.8
Q ss_pred hHHhhhhccccccccC--CCCCCcCHHHHHHHHHhhCCCC----ccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 412 DEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWK----LKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~--d~~G~i~~~El~~~l~~~~~~~----~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++++.++++|..||. |++|.|+.+||..++...+|.. ++..+++.++..+|.+++|.|+|+||+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4677889999999999 8999999999999995435544 35899999999999999999999999987654
|
Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-08 Score=80.95 Aligned_cols=61 Identities=23% Similarity=0.393 Sum_probs=53.1
Q ss_pred HHHHHHHHHh-cCCCCCC-cccHHHHHHhhccc-----------CcHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEK-FDIDRDG-FITPEELRMHTGLK-----------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~-~D~d~~G-~I~~~El~~~l~~~-----------~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|+. +|+||+| +|+.+||+.++... .+++++|+.+|.|+||.|+|+||+.+|...
T Consensus 8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 4567889999 7899986 99999999988764 148999999999999999999999998753
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10 | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.7e-08 Score=81.97 Aligned_cols=63 Identities=21% Similarity=0.376 Sum_probs=53.7
Q ss_pred HHHHHHHHHhcCC-CC-CCcccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 494 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 494 ~~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
...++.+|+.||. |+ +|+|+.+||+.++.. ++ +++.+|+.+|.|+||.|+|+||+.+|...++
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 3467889999997 97 799999999998864 22 3889999999999999999999999986543
|
S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions. |
| >KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.4e-08 Score=84.18 Aligned_cols=102 Identities=15% Similarity=0.218 Sum_probs=84.4
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+++.++-.-+|+++.|+|+.++|...+...++...+.+++...|+.+|.|++|.|++.+|..++....... . ..
T Consensus 69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenl---t---D~ 142 (172)
T KOG0028|consen 69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENL---T---DE 142 (172)
T ss_pred HHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccc---c---HH
Confidence 45566677789999999999999999888888888999999999999999999999999987765432211 1 13
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~ 523 (574)
.+.+.-..+|.|++|-|+.+||..++..
T Consensus 143 El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 143 ELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHhc
Confidence 5667788999999999999999887653
|
|
| >cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1 | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.1e-08 Score=81.06 Aligned_cols=60 Identities=20% Similarity=0.350 Sum_probs=52.5
Q ss_pred HHHHHHHHHhcC-CCCCCc-ccHHHHHHhhcc-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFD-IDRDGF-ITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~G~-I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++++|+.|| +|++|+ |+.+||+.++.. +| +++.+|+.+|.|++|.|+|+||+.++..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 356888999997 999995 999999999964 22 3889999999999999999999999875
|
S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins. |
| >cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11 | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.6e-08 Score=80.60 Aligned_cols=69 Identities=20% Similarity=0.303 Sum_probs=58.7
Q ss_pred HHhhhhcccccc-ccCCCCC-CcCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDA-IDVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~-~D~d~~G-~i~~~El~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..|..+|.. +|.|++| +|+.+||+.++.+.+ +....+.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 456788999999 8899986 999999999997754 33445789999999999999999999999987654
|
S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.7e-08 Score=76.36 Aligned_cols=60 Identities=32% Similarity=0.373 Sum_probs=53.8
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++|..+|.|++|.|+.+||..++.. +|. +.++++.+++.+|.+++|.|+|+||+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~-~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGK-SGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHH-cCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 57899999999999999999999955 664 7889999999999999999999999987654
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6 | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.7e-08 Score=79.20 Aligned_cols=61 Identities=23% Similarity=0.316 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCC-CC-CCcccHHHHHHhhcc---cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGL---KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~-d~-~G~I~~~El~~~l~~---~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|..||. || +|+|+.+||+.++.. +| +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4567889999998 77 899999999999962 44 49999999999999999999999999763
|
S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact |
| >cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.5e-08 Score=81.79 Aligned_cols=60 Identities=30% Similarity=0.350 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHhhccc--CcHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 493 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--GSIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 493 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--~~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
+...+..+|..+|+|+||+|+.+||..+.... ..+..+|..+|.|+||.||++||+..+.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 45578889999999999999999999876221 1378899999999999999999999984
|
SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. |
| >smart00027 EH Eps15 homology domain | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.3e-08 Score=79.96 Aligned_cols=61 Identities=23% Similarity=0.358 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.||+|++|.|+.+|++.++...+ ++..++..+|.+++|.|+|+||+.+|...
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 34788899999999999999999999987765 48899999999999999999999988753
|
Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. |
| >cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.3e-08 Score=74.80 Aligned_cols=57 Identities=32% Similarity=0.529 Sum_probs=50.9
Q ss_pred HHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 498 QAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 498 ~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
+.+|+.+|+|++|.|+.+|++.++...| ++..+++.+|.+++|.|+|+||+.+|...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 3589999999999999999999887666 38889999999999999999999998753
|
The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. |
| >PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.8e-08 Score=70.88 Aligned_cols=51 Identities=37% Similarity=0.629 Sum_probs=47.4
Q ss_pred CCCCcCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 429 KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 429 ~~G~i~~~El~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
++|.|+.+||..+| ..+|.. .+++++..+|+.+|.|++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999 668999 9999999999999999999999999998764
|
... |
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.3e-07 Score=87.44 Aligned_cols=110 Identities=22% Similarity=0.258 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHhcCCCC--cceEEEEEEcC----CEEEEEEeccCCC-chHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 008197 152 VEDVKREVKILQALAGHEN--VVKFYNAFEDD----NYVYIAMELCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224 (574)
Q Consensus 152 ~~~~~~E~~il~~l~~hpn--iv~~~~~~~~~----~~~~lv~e~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l 224 (574)
.....+|...+..|. .-. .+..+.+.+.. ...+||+|++++. +|.+.+... ..++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~--~~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW--EQLDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh--cccchhhHHHHHHHHHHHH
Confidence 346778888887774 222 34555555442 2468999999884 677766432 2266778889999999999
Q ss_pred HHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecccccc
Q 008197 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264 (574)
Q Consensus 225 ~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~ 264 (574)
.-||.+||+|+|++|.|||++..+....+.|+||+-++..
T Consensus 132 ~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999999999999996444558999999987653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 574 | ||||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 3e-69 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 5e-69 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 2e-67 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 2e-67 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 3e-67 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 4e-67 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-64 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 9e-64 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 4e-54 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 5e-54 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 2e-53 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 8e-53 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 8e-53 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 1e-52 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-52 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-51 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 4e-51 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-51 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-51 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-51 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 3e-48 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-43 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 4e-43 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 4e-43 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 4e-43 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 5e-43 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 5e-43 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 7e-43 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 2e-42 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 4e-42 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 4e-42 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 5e-42 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 6e-42 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 9e-42 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 1e-41 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 1e-41 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 1e-41 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-41 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 2e-41 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 2e-41 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 3e-41 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 3e-41 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 4e-41 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 4e-41 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 4e-41 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 5e-41 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 6e-41 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 7e-41 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 7e-41 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 7e-41 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-40 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 1e-40 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-40 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-40 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 1e-40 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 1e-40 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 1e-40 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-40 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-40 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 4e-40 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 5e-40 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 6e-40 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 6e-40 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 1e-39 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 1e-39 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-39 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-39 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 7e-39 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 2e-38 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 6e-38 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 2e-37 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 3e-37 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 3e-37 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-37 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 4e-37 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 9e-37 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-36 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-36 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 3e-36 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 6e-36 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 7e-36 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 1e-35 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-35 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 2e-35 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 2e-35 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 3e-35 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 4e-35 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 5e-35 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 5e-35 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 5e-35 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 1e-34 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-34 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 1e-34 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-34 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 3e-34 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 6e-34 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 9e-34 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-33 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-33 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-33 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-33 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 2e-33 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 4e-33 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 5e-33 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 6e-33 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 8e-33 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 1e-32 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 1e-32 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 1e-32 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 1e-32 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 1e-32 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 1e-32 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 2e-32 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 2e-32 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 2e-32 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 2e-32 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 2e-32 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 2e-32 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 2e-32 | ||
| 1tki_A | 321 | Autoinhibited Serine Kinase Domain Of The Giant Mus | 2e-32 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-32 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 4e-32 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 5e-32 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 5e-31 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 8e-31 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 1e-30 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 1e-30 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 1e-30 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-30 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-30 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-30 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 2e-30 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 2e-30 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 2e-30 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-30 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 3e-30 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-30 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 3e-30 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 3e-30 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 3e-30 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 3e-30 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 3e-30 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-30 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 4e-30 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 4e-30 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-30 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-30 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 4e-30 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 4e-30 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-30 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 4e-30 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 4e-30 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 4e-30 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 4e-30 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 4e-30 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 4e-30 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-30 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 6e-30 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 6e-30 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-30 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 7e-30 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 8e-30 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 9e-30 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 9e-30 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 9e-30 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 9e-30 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-29 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-29 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-29 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 1e-29 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 1e-29 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 1e-29 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-29 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 1e-29 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 1e-29 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 1e-29 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-29 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-29 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-29 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 2e-29 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-29 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-29 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 3e-29 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 3e-29 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 3e-29 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 4e-29 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 4e-29 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 4e-29 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-29 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 4e-29 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 4e-29 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 4e-29 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 4e-29 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 4e-29 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 5e-29 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 5e-29 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 5e-29 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 5e-29 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 5e-29 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 5e-29 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 5e-29 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 6e-29 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 6e-29 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 1e-28 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 2e-28 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 2e-28 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 3e-28 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 6e-28 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 1e-27 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-27 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-27 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 3e-27 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 3e-27 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 3e-27 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 3e-27 | ||
| 3kga_A | 299 | Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe | 5e-27 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 6e-27 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 6e-27 | ||
| 2aao_A | 166 | Regulatory Apparatus Of Calcium Dependent Protein K | 7e-27 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 7e-27 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 7e-27 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 7e-27 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 6e-26 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 9e-26 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 4e-25 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 5e-25 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 2e-24 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 3e-24 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-24 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 7e-24 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 1e-23 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 1e-23 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-23 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 2e-23 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 2e-23 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 2e-23 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-23 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 2e-23 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-23 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 2e-23 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 2e-23 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-23 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 3e-23 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 3e-23 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 3e-23 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 4e-23 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 4e-23 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 5e-23 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 5e-23 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 5e-23 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-22 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-22 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-22 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 3e-22 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 3e-22 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 3e-22 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 4e-22 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 4e-22 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 4e-22 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 5e-22 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 9e-22 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 1e-21 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 2e-21 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 3e-21 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 4e-21 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 5e-21 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 5e-21 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 5e-21 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 5e-21 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 6e-21 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 6e-21 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 6e-21 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 6e-21 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 6e-21 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 6e-21 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 6e-21 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 7e-21 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 7e-21 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 7e-21 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 7e-21 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 7e-21 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 7e-21 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 7e-21 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 8e-21 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 8e-21 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 8e-21 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 8e-21 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 8e-21 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 8e-21 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 8e-21 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 9e-21 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 9e-21 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 1e-20 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 1e-20 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 1e-20 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 1e-20 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 1e-20 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 1e-20 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 1e-20 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 1e-20 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 1e-20 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 1e-20 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 1e-20 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 1e-20 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 1e-20 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 1e-20 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 1e-20 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 1e-20 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 1e-20 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 1e-20 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 1e-20 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 1e-20 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 2e-20 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-20 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 2e-20 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-20 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-20 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-20 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 2e-20 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 2e-20 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-20 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-20 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 2e-20 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 2e-20 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 2e-20 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 2e-20 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 3e-20 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 3e-20 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 3e-20 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 3e-20 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 3e-20 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 3e-20 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 3e-20 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-20 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 3e-20 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 3e-20 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 4e-20 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 4e-20 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 4e-20 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 4e-20 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 4e-20 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 4e-20 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 5e-20 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 5e-20 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 5e-20 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 5e-20 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 6e-20 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 6e-20 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 6e-20 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 7e-20 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 8e-20 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 8e-20 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 9e-20 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 9e-20 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 9e-20 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-19 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 1e-19 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-19 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-19 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 1e-19 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 2e-19 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-19 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 2e-19 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 2e-19 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 2e-19 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 2e-19 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-19 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 2e-19 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-19 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-19 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-19 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 3e-19 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-19 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-19 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-19 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-19 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 3e-19 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-19 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 3e-19 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 4e-19 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 4e-19 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 4e-19 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 4e-19 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 4e-19 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 4e-19 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 4e-19 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 4e-19 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 4e-19 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 4e-19 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 4e-19 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 4e-19 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-19 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 4e-19 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 4e-19 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 4e-19 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 4e-19 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 4e-19 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 4e-19 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 4e-19 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 4e-19 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 4e-19 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 5e-19 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 5e-19 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 5e-19 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 6e-19 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 6e-19 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 8e-19 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 8e-19 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 9e-19 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 9e-19 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 9e-19 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 1e-18 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 1e-18 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 1e-18 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-18 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 1e-18 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 1e-18 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-18 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 1e-18 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 1e-18 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 1e-18 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-18 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-18 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-18 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 1e-18 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 1e-18 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 1e-18 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 1e-18 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-18 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-18 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 2e-18 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-18 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 2e-18 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-18 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 2e-18 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-18 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 2e-18 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 2e-18 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 2e-18 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-18 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-18 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 2e-18 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 2e-18 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 2e-18 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 2e-18 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-18 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-18 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 2e-18 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 2e-18 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 2e-18 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-18 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 2e-18 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-18 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 2e-18 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 2e-18 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 2e-18 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-18 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-18 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 2e-18 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-18 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-18 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 2e-18 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 2e-18 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 2e-18 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-18 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-18 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 3e-18 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-18 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 3e-18 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-18 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 3e-18 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 3e-18 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 3e-18 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-18 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 3e-18 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 3e-18 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 3e-18 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-18 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 3e-18 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 3e-18 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 3e-18 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-18 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 3e-18 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 3e-18 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 3e-18 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-18 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 3e-18 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 4e-18 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 4e-18 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-18 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-18 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 4e-18 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 5e-18 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 5e-18 | ||
| 2iwi_A | 312 | Crystal Structure Of The Human Pim2 In Complex With | 5e-18 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 6e-18 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 6e-18 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 6e-18 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 6e-18 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-18 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 7e-18 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 7e-18 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 7e-18 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 7e-18 | ||
| 2zmc_A | 390 | Crystal Structure Of Human Mitotic Checkpoint Kinas | 7e-18 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 8e-18 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 8e-18 | ||
| 3hmn_A | 342 | Crystal Structure Of Human Mps1 Catalytic Domain In | 8e-18 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 9e-18 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 9e-18 | ||
| 2zmd_A | 390 | Crystal Structure Of Human Mps1 Catalytic Domain T6 | 9e-18 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 9e-18 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 1e-17 | ||
| 3h9f_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-17 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 1e-17 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 1e-17 | ||
| 3dbq_A | 343 | Crystal Structure Of Ttk Kinase Domain Length = 343 | 1e-17 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 1e-17 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 1e-17 | ||
| 3cek_A | 313 | Crystal Structure Of Human Dual Specificity Protein | 1e-17 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 1e-17 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-17 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 1e-17 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 1e-17 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 1e-17 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 1e-17 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 1e-17 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 1e-17 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 1e-17 | ||
| 2x9e_A | 317 | Human Mps1 In Complex With Nms-P715 Length = 317 | 1e-17 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 1e-17 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 1e-17 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 1e-17 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 1e-17 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-17 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 1e-17 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 1e-17 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 2e-17 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 2e-17 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 2e-17 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 2e-17 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 2e-17 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 2e-17 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 2e-17 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-17 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 2e-17 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 2e-17 | ||
| 3vqu_A | 320 | Crystal Structure Of Human Mps1 Catalytic Domain In | 2e-17 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-17 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-17 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-17 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 2e-17 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 2e-17 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 2e-17 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-17 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 3e-17 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 3e-17 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 3e-17 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 3e-17 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 3e-17 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 3e-17 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 3e-17 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 3e-17 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 4e-17 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 4e-17 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 4e-17 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 4e-17 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 4e-17 | ||
| 3pm8_A | 197 | Cad Domain Of Pff0520w, Calcium Dependent Protein K | 5e-17 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 5e-17 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 5e-17 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 6e-17 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 7e-17 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 8e-17 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 8e-17 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-16 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 1e-16 | ||
| 1s6i_A | 188 | Ca2+-Regulatory Region (Cld) From Soybean Calcium-D | 1e-16 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 1e-16 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 2e-16 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 2e-16 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 2e-16 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 2e-16 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-16 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-16 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-16 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 4e-16 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 4e-16 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 4e-16 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 5e-16 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 6e-16 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-16 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 7e-16 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 7e-16 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 9e-16 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 9e-16 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 1e-15 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-15 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 1e-15 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 1e-15 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 1e-15 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 1e-15 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 1e-15 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 2e-15 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 2e-15 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 2e-15 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 2e-15 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 3e-15 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 3e-15 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 3e-15 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 4e-15 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 6e-15 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 8e-15 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 9e-15 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 9e-15 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 1e-14 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 1e-14 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 1e-14 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-14 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-14 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-14 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-14 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-14 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-14 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-14 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-14 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-14 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-14 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 1e-14 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-14 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 2e-14 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-14 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 2e-14 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-14 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 2e-14 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 2e-14 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 3e-14 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 3e-14 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 4e-14 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 5e-14 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 5e-14 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 8e-14 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-13 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 1e-13 | ||
| 3sg7_A | 448 | Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4 | 3e-13 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 3e-13 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 3e-13 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-13 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 4e-13 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 4e-13 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 4e-13 | ||
| 3sg5_A | 448 | Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke | 4e-13 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 4e-13 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 4e-13 | ||
| 1ooj_A | 149 | Structural Genomics Of Caenorhabditis Elegans : Cal | 4e-13 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 5e-13 | ||
| 3sg4_A | 448 | Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len | 5e-13 | ||
| 4djc_A | 152 | 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA | 5e-13 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 5e-13 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 5e-13 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 6e-13 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 6e-13 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 6e-13 | ||
| 3u0k_A | 440 | Crystal Structure Of The Genetically Encoded Calciu | 7e-13 | ||
| 3sg3_A | 449 | Crystal Structure Of Gcamp3-D380y Length = 449 | 7e-13 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 8e-13 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 8e-13 | ||
| 1exr_A | 148 | The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca | 9e-13 | ||
| 1clm_A | 148 | Structure Of Paramecium Tetraurelia Calmodulin At 1 | 1e-12 | ||
| 3sg6_A | 450 | Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L | 1e-12 | ||
| 3evu_A | 449 | Crystal Structure Of Calcium Bound Dimeric Gcamp2, | 1e-12 | ||
| 3ek8_A | 449 | Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L | 1e-12 | ||
| 2bkh_B | 149 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-12 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-12 | ||
| 1vrk_A | 148 | The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 | 1e-12 | ||
| 3evr_A | 411 | Crystal Structure Of Calcium Bound Monomeric Gcamp2 | 1e-12 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 1e-12 | ||
| 2k0j_A | 148 | Solution Structure Of Cam Complexed To Drp1p Length | 1e-12 | ||
| 2wel_D | 150 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 1e-12 | ||
| 2be6_A | 150 | 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC | 2e-12 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 2e-12 | ||
| 2ygg_B | 150 | Complex Of Cambr And Cam Length = 150 | 2e-12 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 1xfu_O | 149 | Crystal Structure Of Anthrax Edema Factor (ef) Trun | 2e-12 | ||
| 2f2o_A | 179 | Structure Of Calmodulin Bound To A Calcineurin Pept | 2e-12 | ||
| 1iq5_A | 149 | CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE | 2e-12 | ||
| 3o78_A | 415 | The Structure Of Ca2+ Sensor (Case-12) Length = 415 | 2e-12 | ||
| 1qtx_A | 148 | The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept | 2e-12 | ||
| 3o77_A | 415 | The Structure Of Ca2+ Sensor (Case-16) Length = 415 | 2e-12 | ||
| 2lv6_A | 148 | The Complex Between Ca-calmodulin And Skeletal Musc | 2e-12 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 2e-12 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-12 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-12 | ||
| 2bbm_A | 148 | Solution Structure Of A Calmodulin-Target Peptide C | 2e-12 | ||
| 3sg2_A | 449 | Crystal Structure Of Gcamp2-T116v,D381y Length = 44 | 2e-12 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 2e-12 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-12 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 2e-12 | ||
| 2vb6_B | 149 | Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo | 2e-12 | ||
| 3ekh_A | 449 | Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER | 2e-12 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 3e-12 | ||
| 3l19_A | 214 | Crystal Structure Of Calcium Binding Domain Of Cpcd | 3e-12 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 3e-12 | ||
| 4aqr_A | 149 | Crystal Structure Of A Calmodulin In Complex With T | 3e-12 | ||
| 1prw_A | 149 | Crystal Structure Of Bovine Brain Ca++ Calmodulin I | 3e-12 | ||
| 1up5_B | 148 | Chicken Calmodulin Length = 148 | 3e-12 | ||
| 1cdl_A | 147 | Target Enzyme Recognition By Calmodulin: 2.4 Angstr | 3e-12 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 3e-12 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 3e-12 | ||
| 3ewt_A | 154 | Crystal Structure Of Calmodulin Complexed With A Pe | 3e-12 | ||
| 1cm1_A | 148 | Motions Of Calmodulin-Single-Conformer Refinement L | 3e-12 | ||
| 1qs7_A | 145 | The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti | 4e-12 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 4e-12 | ||
| 2lmt_A | 148 | Nmr Structure Of Androcam Length = 148 | 4e-12 | ||
| 3k21_A | 191 | Crystal Structure Of Carboxy-Terminus Of Pfc0420w L | 4e-12 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-12 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 4e-12 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 4e-12 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-12 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 5e-12 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 5e-12 | ||
| 1cdm_A | 144 | Modulation Of Calmodulin Plasticity In Molecular Re | 6e-12 | ||
| 4gow_D | 144 | Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX | 6e-12 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 6e-12 | ||
| 2l1w_A | 149 | The Solution Structure Of Soybean Calmodulin Isofor | 7e-12 | ||
| 2vay_A | 146 | Calmodulin Complexed With Cav1.1 Iq Peptide Length | 7e-12 | ||
| 2ix7_A | 145 | Structure Of Apo-Calmodulin Bound To Unconventional | 7e-12 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 8e-12 | ||
| 1rfj_A | 149 | Crystal Structure Of Potato Calmodulin Pcm6 Length | 9e-12 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 9e-12 | ||
| 1dmo_A | 148 | Calmodulin, Nmr, 30 Structures Length = 148 | 9e-12 | ||
| 1y0v_H | 146 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 1e-11 | ||
| 1k93_D | 144 | Crystal Structure Of The Adenylyl Cyclase Domain Of | 1e-11 | ||
| 3khe_A | 191 | Crystal Structure Of The Calcium-Loaded Calmodulin- | 2e-11 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-11 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-11 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-11 | ||
| 1q8y_A | 373 | The Structure Of The Yeast Sr Protein Kinase, Sky1p | 2e-11 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-11 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 3e-11 | ||
| 1ahr_A | 146 | Calmodulin Mutant With A Two Residue Deletion In Th | 3e-11 | ||
| 4f99_A | 361 | Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti | 3e-11 | ||
| 2lhi_A | 176 | Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L | 3e-11 | ||
| 1how_A | 373 | The X-Ray Crystal Structure Of Sky1p, An Sr Protein | 4e-11 | ||
| 1deg_A | 142 | The Linker Of Des-Glu84 Calmodulin Is Bent As Seen | 4e-11 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-11 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 4e-11 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-11 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 6e-11 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 6e-11 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 7e-11 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 7e-11 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 8e-11 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 9e-11 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 9e-11 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 1e-10 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 1e-10 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-10 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 1e-10 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 1e-10 | ||
| 3kvw_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 1e-10 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 1e-10 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 1e-10 | ||
| 4azf_A | 417 | Human Dyrk2 In Complex With Leucettine L41 Length = | 1e-10 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 1e-10 | ||
| 1eh4_A | 298 | Binary Complex Of Casein Kinase-1 From S. Pombe Wit | 1e-10 | ||
| 3k2l_A | 429 | Crystal Structure Of Dual-Specificity Tyrosine Phos | 2e-10 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-10 | ||
| 2csn_A | 297 | Binary Complex Of Casein Kinase-1 With Cki7 Length | 2e-10 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-10 | ||
| 3o4y_A | 196 | Crystal Structure Of Cad Domain Of The Plasmodium V | 2e-10 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 2e-10 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 2e-10 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-10 | ||
| 1lkj_A | 146 | Nmr Structure Of Apo Calmodulin From Yeast Saccharo | 2e-10 | ||
| 1mf8_B | 170 | Crystal Structure Of Human Calcineurin Complexed Wi | 2e-10 | ||
| 1tco_B | 169 | Ternary Complex Of A Calcineurin A Fragment, Calcin | 2e-10 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-10 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 3e-10 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-10 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-10 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 3e-10 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 3e-10 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 3e-10 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-10 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 3e-10 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-10 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 3e-10 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 4e-10 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 4e-10 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 4e-10 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-10 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 4e-10 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 4e-10 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 4e-10 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 4e-10 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 4e-10 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 4e-10 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 4e-10 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 4e-10 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 4e-10 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 4e-10 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 5e-10 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 5e-10 | ||
| 1ckj_A | 317 | Casein Kinase I Delta Truncation Mutant Containing | 5e-10 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 5e-10 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 5e-10 | ||
| 1ggz_A | 148 | Crystal Structure Of The Calmodulin-Like Protein (H | 6e-10 | ||
| 3uys_A | 296 | Crystal Structure Of Apo Human Ck1d Length = 296 | 6e-10 | ||
| 1xfx_O | 149 | Crystal Structure Of Anthrax Edema Factor (Ef) In C | 7e-10 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 7e-10 | ||
| 1niw_A | 148 | Crystal Structure Of Endothelial Nitric Oxide Synth | 7e-10 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 7e-10 | ||
| 2p6b_B | 156 | Crystal Structure Of Human Calcineurin In Complex W | 8e-10 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 8e-10 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 9e-10 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 9e-10 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 9e-10 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 9e-10 | ||
| 4ds7_A | 147 | Crystal Structure Of Yeast Calmodulin Bound To The | 9e-10 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-09 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-09 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 1e-09 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 1e-09 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 1e-09 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 1e-09 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 1e-09 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-09 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 1e-09 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-09 | ||
| 3ll8_B | 155 | Crystal Structure Of Calcineurin In Complex With Ak | 1e-09 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 2e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 2e-09 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 2e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-09 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-09 | ||
| 1y6w_A | 148 | Trapped Intermediate Of Calmodulin Length = 148 | 2e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 2e-09 | ||
| 3g0f_A | 336 | Kit Kinase Domain Mutant D816h In Complex With Suni | 2e-09 | ||
| 3anq_A | 368 | Human Dyrk1aINHIBITOR COMPLEX Length = 368 | 3e-09 | ||
| 2vx3_A | 382 | Crystal Structure Of The Human Dual Specificity Tyr | 3e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 3e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 3e-09 | ||
| 3qrx_A | 169 | Chlamydomonas Reinhardtii Centrin Bound To Melittin | 3e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 3e-09 | ||
| 2pzi_A | 681 | Crystal Structure Of Protein Kinase Pkng From Mycob | 3e-09 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 3e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 3e-09 | ||
| 1pkg_A | 329 | Structure Of A C-kit Kinase Product Complex Length | 3e-09 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 4e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 4e-09 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 4e-09 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-09 | ||
| 1t46_A | 313 | Structural Basis For The Autoinhibition And Sti-571 | 4e-09 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 4e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 4e-09 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 4e-09 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-09 | ||
| 1a2x_A | 159 | Complex Of Troponin C With A 47 Residue (1-47) Frag | 5e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-09 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 5e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 5e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 5e-09 | ||
| 3sv0_A | 483 | Crystal Structure Of Casein Kinase-1 Like Protein I | 5e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 5e-09 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 5e-09 | ||
| 2lan_A | 167 | Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc | 5e-09 | ||
| 2lhh_A | 128 | Solution Structure Of Ca2+-Bound Ycam Length = 128 | 5e-09 | ||
| 1t45_A | 331 | Structural Basis For The Autoinhibition And Sti-571 | 5e-09 | ||
| 3g0e_A | 336 | Kit Kinase Domain In Complex With Sunitinib Length | 6e-09 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-09 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 6e-09 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-09 | ||
| 1tnw_A | 162 | Nmr Solution Structure Of Calcium Saturated Skeleta | 6e-09 | ||
| 5tnc_A | 162 | Refined Crystal Structure Of Troponin C From Turkey | 7e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 7e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 7e-09 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 8e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 8e-09 | ||
| 3ox6_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 8e-09 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 8e-09 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 9e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 9e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 9e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 9e-09 | ||
| 4aze_A | 382 | Human Dyrk1a In Complex With Leucettine L41 Length | 9e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 1e-08 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 1e-08 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 1e-08 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 1e-08 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 1e-08 | ||
| 1ytz_C | 162 | Crystal Structure Of Skeletal Muscle Troponin In Th | 1e-08 | ||
| 2w49_0 | 159 | Isometrically Contracting Insect Asynchronous Fligh | 1e-08 | ||
| 3ox5_A | 153 | Crystal Structure Of The Calcium Sensor Calcium-Bin | 1e-08 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-08 | ||
| 4tnc_A | 162 | Refined Structure Of Chicken Skeletal Muscle Tropon | 1e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 1e-08 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 1e-08 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 1e-08 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 1e-08 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 1e-08 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-08 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-08 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 2e-08 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-08 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-08 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 2e-08 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-08 | ||
| 3nr9_A | 368 | Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length | 2e-08 | ||
| 1s6j_A | 87 | N-Terminal Region Of The Ca2+-Saturated Calcium Reg | 2e-08 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 2e-08 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-08 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-08 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 2e-08 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 2e-08 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-08 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 3e-08 | ||
| 4hni_A | 296 | Crystal Structure Of Ck1e In Complex With Pf4800567 | 3e-08 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-08 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-08 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-08 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 3e-08 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 3e-08 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 3e-08 | ||
| 3mse_B | 180 | Crystal Structure Of C-Terminal Domain Of Pf110239 | 4e-08 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 4e-08 | ||
| 2eu9_A | 355 | Crystal Structure Of Clk3 Length = 355 | 4e-08 | ||
| 1tcf_A | 159 | Crystal Structure Of Calcium-Saturated Rabbit Skele | 4e-08 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 4e-08 | ||
| 2exe_A | 357 | Crystal Structure Of The Phosphorylated Clk3 Length | 4e-08 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 5e-08 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 5e-08 | ||
| 3kf9_A | 149 | Crystal Structure Of The SdcenSKMLCK COMPLEX Length | 6e-08 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 6e-08 | ||
| 2wu6_A | 381 | Crystal Structure Of The Human Clk3 In Complex With | 6e-08 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 7e-08 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 8e-08 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 8e-08 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 9e-08 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 9e-08 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 9e-08 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-07 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-07 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-07 | ||
| 1z57_A | 339 | Crystal Structure Of Human Clk1 In Complex With 10z | 1e-07 | ||
| 2obh_A | 143 | Centrin-Xpc Peptide Length = 143 | 1e-07 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-07 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 1e-07 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-07 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 2e-07 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 2e-07 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 3e-07 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 3e-07 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-07 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 3e-07 | ||
| 2c47_A | 313 | Structure Of Casein Kinase 1 Gamma 2 Length = 313 | 3e-07 | ||
| 2vag_A | 339 | Crystal Structure Of Di-Phosphorylated Human Clk1 I | 3e-07 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 3e-07 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 3e-07 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 3e-07 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-07 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 3e-07 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 3e-07 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-07 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 4e-07 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 4e-07 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 4e-07 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 4e-07 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 4e-07 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 4e-07 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 4e-07 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 5e-07 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 5e-07 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 7e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 8e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 8e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 9e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 9e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 9e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 9e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-06 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 1e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-06 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-06 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-06 |
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448 | Back alignment and structure |
|
| >pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440 | Back alignment and structure |
|
| >pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148 | Back alignment and structure |
|
| >pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450 | Back alignment and structure |
|
| >pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449 | Back alignment and structure |
|
| >pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148 | Back alignment and structure |
|
| >pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150 | Back alignment and structure |
|
| >pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149 | Back alignment and structure |
|
| >pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179 | Back alignment and structure |
|
| >pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149 | Back alignment and structure |
|
| >pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415 | Back alignment and structure |
|
| >pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148 | Back alignment and structure |
|
| >pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415 | Back alignment and structure |
|
| >pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148 | Back alignment and structure |
|
| >pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149 | Back alignment and structure |
|
| >pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149 | Back alignment and structure |
|
| >pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149 | Back alignment and structure |
|
| >pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154 | Back alignment and structure |
|
| >pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148 | Back alignment and structure |
|
| >pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148 | Back alignment and structure |
|
| >pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144 | Back alignment and structure |
|
| >pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149 | Back alignment and structure |
|
| >pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146 | Back alignment and structure |
|
| >pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148 | Back alignment and structure |
|
| >pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146 | Back alignment and structure |
|
| >pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144 | Back alignment and structure |
|
| >pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146 | Back alignment and structure |
|
| >pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361 | Back alignment and structure |
|
| >pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176 | Back alignment and structure |
|
| >pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373 | Back alignment and structure |
|
| >pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298 | Back alignment and structure |
|
| >pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146 | Back alignment and structure |
|
| >pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170 | Back alignment and structure |
|
| >pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148 | Back alignment and structure |
|
| >pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296 | Back alignment and structure |
|
| >pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368 | Back alignment and structure |
|
| >pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167 | Back alignment and structure |
|
| >pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128 | Back alignment and structure |
|
| >pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331 | Back alignment and structure |
|
| >pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162 | Back alignment and structure |
|
| >pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162 | Back alignment and structure |
|
| >pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159 | Back alignment and structure |
|
| >pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368 | Back alignment and structure |
|
| >pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355 | Back alignment and structure |
|
| >pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339 | Back alignment and structure |
|
| >pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313 | Back alignment and structure |
|
| >pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 609 bits (1571), Expect = 0.0
Identities = 160/523 (30%), Positives = 254/523 (48%), Gaps = 40/523 (7%)
Query: 48 KHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
H H H +N + R++ G Y + LG G
Sbjct: 2 HHHHHHSSGRENLYFQGIAINPGMYVRKKEG--------------KIGESYFKVRKLGSG 47
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167
+G + +K A+K I+K++ + D + E++ E+ +L++L
Sbjct: 48 AYGEVLLCKEKNGHSEKAIKVIKKSQF--DKGRYSDDNKNIEKFHEEIYNEISLLKSL-D 104
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
H N++K ++ FED Y Y+ E EGGEL ++I+ + ++ E DAA +++Q+L
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYL 162
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 287
H H +VHRD+KPEN L ++ ++K DFGLS F K +D +G+AYY+APEVLK+
Sbjct: 163 HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK 222
Query: 288 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 347
K + DVWS GVI YILLCG PF + + I K+V + K F W +IS+ AK+ +
Sbjct: 223 KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELI 282
Query: 348 KKLLVKDPRARLTAAQALSHPWVREG---GDASEIPIDISVLNNMRQFVKYSRLKQFALR 404
K +L D R TA +AL+ W+++ + S+ L+NMR+F +L Q A+
Sbjct: 283 KLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAIL 342
Query: 405 ALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVL 456
+ S L EE +L D F +D + +G + +E+ + K E V
Sbjct: 343 FIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVD 402
Query: 457 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 516
IL+ +D + +G +++SEF++ + L R + AF FD D+ G IT EE
Sbjct: 403 NILKEVDFDKNGYIEYSEFISVCMDKQILF------SEERLRRAFNLFDTDKSGKITKEE 456
Query: 517 LRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555
L GL + + +L EAD +KD I EF ++
Sbjct: 457 LANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 607 bits (1568), Expect = 0.0
Identities = 160/499 (32%), Positives = 246/499 (49%), Gaps = 46/499 (9%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
R + + F RY I +LG G FG D+ AVK I K
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK----- 61
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I
Sbjct: 62 --------NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+ +K R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGL
Sbjct: 113 IKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320
S + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR----EGGDA 376
K V K F W +IS+ AKD ++K+L P R+TA Q L HPW++ E
Sbjct: 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTI 290
Query: 377 SEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISL 435
S++P S + N+RQF +L Q AL +AS L +E L + F +D + +G +
Sbjct: 291 SDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDR 350
Query: 436 EEMRQALAKDLPWK-------------LKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482
+E+ + + + K E ++ ++ +D + G +++SEF+A+ +
Sbjct: 351 DELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDR 410
Query: 483 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADI 536
L + R + AF+ FD D G I+ +EL S ++ ++E+ D
Sbjct: 411 TILLSRE------RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDN 464
Query: 537 DKDGRISLSEFRRLLRTAS 555
+KDG + +EF +L+
Sbjct: 465 NKDGEVDFNEFVEMLQNFV 483
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 598 bits (1543), Expect = 0.0
Identities = 168/528 (31%), Positives = 259/528 (49%), Gaps = 52/528 (9%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGH 106
H H H R Y Q + + G Y K LG
Sbjct: 2 HHHHHHSSGRENLYFQGDLQATPGMFITSKKG--------------HLSEMYQRVKKLGS 47
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166
G +G + DK A+K I K + + + EV +L+ L
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVS-------------TSSNSKLLEEVAVLKLL- 93
Query: 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
H N++K Y+ FED Y+ ME +GGEL D I+ + ++ E DAAV+++Q+L
Sbjct: 94 DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTY 151
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H H +VHRD+KPEN L +S ++D+ +K DFGLS + KK ++ +G+AYY+APEVL+
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
Query: 287 RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 346
+K + DVWSIGVI +ILL G PF +T+ I ++V + K F W ++S AKD
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDL 271
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASE----IPIDISVLNNMRQFVKYSRLKQFA 402
+K++L D + R++A QAL HPW++E E +P + + NMR+F +L Q A
Sbjct: 272 IKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAA 331
Query: 403 LRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESR 454
L +AS L EE +L D F ID + +G + +E+ +K ES
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 455 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITP 514
V IL A D + +G +D+SEFV + L D + ++AF+KFD D +G I+
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKD------KLESAFQKFDQDGNGKISV 445
Query: 515 EELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASISS 558
+EL GL + ++ D + DG + EF ++++ ++
Sbjct: 446 DELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSNN 493
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 593 bits (1532), Expect = 0.0
Identities = 158/479 (32%), Positives = 243/479 (50%), Gaps = 39/479 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
F RY ++LG G FG + DK G AVK I K + +
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ------------VKQKTD 69
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E + REV++L+ L H N++K Y FED Y Y+ E+ GGEL D I+++K R++E
Sbjct: 70 KESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEV 126
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
DAA ++RQ+L H + +VHRD+KPEN L +S +D++++ DFGLS + KK +
Sbjct: 127 DAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186
Query: 272 DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
D +G+AYY+APEVL + DVWS GVI YILL G PF E I K+V + K F
Sbjct: 187 DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF 246
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR---EGGDASEIPIDISVLNN 388
W +S SAKD ++K+L P R++A AL H W++ + + ++P + + N
Sbjct: 247 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN 306
Query: 389 MRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 447
+RQF +L Q AL + S L +E +L F +D + +G + E+ + + +
Sbjct: 307 IRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMR 366
Query: 448 W----------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497
E V ++L A+D + +G +++SEFV + L + R
Sbjct: 367 MKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRE------RL 420
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 552
+ AF FD D G I+ EL G+ + +L E D + DG + EF+++L
Sbjct: 421 ERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLL 479
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 540 bits (1394), Expect = 0.0
Identities = 108/465 (23%), Positives = 196/465 (42%), Gaps = 39/465 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
F Y + + LG G F G A I K+
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-------------ARD 53
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+ ++RE +I + L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E
Sbjct: 54 HQKLEREARICRLL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEA 110
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKF 270
DA+ ++Q+L CH G+VHR++KPEN L S + +++K DFGL+ ++ + +
Sbjct: 111 DASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
G+ Y++PEVL++ G D+W+ GVI YILL G PFWD+ + +++++
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 230
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 389
DF W +++ AKD + K+L +P R+TAA+AL HPW+ + ++ +
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCL 290
Query: 390 RQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 447
++F +LK L + +T + ++ I+ NG
Sbjct: 291 KKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAISNGDFESYT---------- 340
Query: 448 WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 507
K+ + + N +DF F L + + D
Sbjct: 341 -KMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTIL-----NPHIHLMGD 394
Query: 508 RDGFITPEELRMH---TGLKGSIDPLLEEADIDKDGRISLSEFRR 549
I + + G+ + +DG+ + F R
Sbjct: 395 ESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKWQIVHFHR 439
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 467 bits (1203), Expect = e-163
Identities = 98/342 (28%), Positives = 171/342 (50%), Gaps = 16/342 (4%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D F+ Y + +++G G F ++ G + AVK ++ K +
Sbjct: 19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK----------FTSSPGL 68
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS--RY 208
+ ED+KRE I L H ++V+ + D +Y+ E +G +L I+ + D+ Y
Sbjct: 69 STEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY 127
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG 267
+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG++ + G
Sbjct: 128 SEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 268 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F+ +++
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIK 246
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 386
K + W IS SAKD V+++L+ DP R+T +AL+HPW++E + +
Sbjct: 247 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV 306
Query: 387 NNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVD 428
+R+F +LK L A++S + D ++ D
Sbjct: 307 EQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSED 348
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 461 bits (1189), Expect = e-160
Identities = 99/368 (26%), Positives = 178/368 (48%), Gaps = 22/368 (5%)
Query: 72 NSRRQTGVIPCGKRTDFGYDK--DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI 129
+ TG G+ ++F + F Y + + LG G F K G A K I
Sbjct: 3 HMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII 62
Query: 130 EKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 189
K+ + ++RE +I + L H N+V+ +++ +++++ Y+ +
Sbjct: 63 NTKKLS-------------ARDFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFD 108
Query: 190 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249
L GGEL + I+A++ Y+E DA+ ++Q+L A CH +G+VHR++KPEN L S +
Sbjct: 109 LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 166
Query: 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 308
+++K DFGL+ + + + G+ Y++PEVLK+ D+W+ GVI YILL G
Sbjct: 167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PFWD+ + ++ ++ D+ W +++ AK + +L +P+ R+TA QAL P
Sbjct: 227 YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286
Query: 369 WVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVD 428
W+ + ++ +++F +LK L + +T L++L
Sbjct: 287 WICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNKKEQ 343
Query: 429 KNGSISLE 436
S E
Sbjct: 344 GPPSTIKE 351
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 440 bits (1135), Expect = e-153
Identities = 111/292 (38%), Positives = 155/292 (53%), Gaps = 16/292 (5%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
R + + F RY I +LG G FG D+ AVK I K +
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK--- 63
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I
Sbjct: 64 ----------DTSTILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+ +K R++E DAA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGL
Sbjct: 113 IKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGL 170
Query: 261 SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320
S + K +D +G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
K V K F W +IS+ AKD ++K+L P R+TA Q L HPW+++
Sbjct: 231 LKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 440 bits (1135), Expect = e-153
Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 24/331 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
K+ +Y I + LG G+FG + + ++ K ++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----------------D 44
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
VK+E+ IL H N++ + +FE + + E G ++ +RI E+
Sbjct: 45 QVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTS-AFELNER 102
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+ V Q+ H H + H D++PEN ++++ + S++K +FG + +KPG F+
Sbjct: 103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFR 161
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+ + Y APEV + +D+WS+G + Y+LL G PF +T I + ++ +
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT 221
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++ + + V+ ++
Sbjct: 222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLK 277
Query: 391 QFVKYSRLKQFALRALASTLDDEELADLRDQ 421
Y L + L + S +R Q
Sbjct: 278 HRRYYHTLIKKDLNMVVSAARISCGGAIRSQ 308
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 437 bits (1126), Expect = e-152
Identities = 92/295 (31%), Positives = 159/295 (53%), Gaps = 18/295 (6%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
R + + D + + LG G FG ++ ++++G +K I K++
Sbjct: 7 HSSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR------- 59
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
+ +E ++ E+++L++L H N++K + FED + +YI ME CEGGELL+RI
Sbjct: 60 -------SQVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111
Query: 201 LAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
++ + +E A +++QM+ A H +VH+D+KPEN LF+ S +K DF
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDF 171
Query: 259 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 318
GL++ K + + G+A Y+APEV KR + D+WS GV+ Y LL G PF + +
Sbjct: 172 GLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE 231
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ ++ +P++ + P ++ A D +K++L KDP R +AAQ L H W ++
Sbjct: 232 EVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 436 bits (1124), Expect = e-152
Identities = 107/289 (37%), Positives = 163/289 (56%), Gaps = 18/289 (6%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++ YT+ +G G +G +A K R A KKI K + V
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---------------EDV 50
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
+ K+E++I+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K+ + E D
Sbjct: 51 DRFKQEIEIMKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESD 107
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
AA +++ +L A CH + HRD+KPENFLF + DS LK DFGL+ KPGK +
Sbjct: 108 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 273 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
VG+ YYV+P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++ F
Sbjct: 168 KVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP 227
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
K W ++S A+ +++LL K P+ R+T+ QAL H W + +S +
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 435 bits (1122), Expect = e-150
Identities = 116/367 (31%), Positives = 175/367 (47%), Gaps = 26/367 (7%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDK--DFDRRYTIGKLL 104
H H H + L + + G + + L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESEL 61
Query: 105 GHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQA 164
G G Y K A+K ++K + V+ E+ +L
Sbjct: 62 GRGATSIVYRCKQKGTQKPYALKVLKKTV-----------------DKKIVRTEIGVLLR 104
Query: 165 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 224
L+ H N++K FE + + +EL GGEL DRI+ K Y+E+DAA V+Q+L
Sbjct: 105 LS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAV 161
Query: 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 284
A H +G+VHRD+KPEN L+ + D+ LK DFGLS ++ + + G+ Y APE+
Sbjct: 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI 221
Query: 285 LKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNS 342
L+ + GPE D+WS+G+ITYILLCG PF+D+ D +F+ +L + F W +S +
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLN 281
Query: 343 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFA 402
AKD V+KL+V DP+ RLT QAL HPWV G A+ + +++F +LK
Sbjct: 282 AKDLVRKLIVLDPKKRLTTFQALQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAV 339
Query: 403 LRALAST 409
+AS+
Sbjct: 340 KAVVASS 346
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 435 bits (1120), Expect = e-149
Identities = 89/396 (22%), Positives = 160/396 (40%), Gaps = 30/396 (7%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
N ++ + +Q + D
Sbjct: 4 NSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDY 63
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
++LG G G +K ++ A+K ++ +R
Sbjct: 64 KVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------------------CPKARR 103
Query: 158 EVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
EV++ + ++V+ + +E+ + I ME +GGEL RI + D +TE++A
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREA 163
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 164 SEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP 223
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNK 328
+ YYVAPEVL + D+WS+GVI YILLCG PF+ G+ + +
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 283
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 388
+F W +S K ++ LL +P R+T + ++HPW+ + + P+ S +
Sbjct: 284 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 343
Query: 389 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 424
+ ++ +K+ ALA+ D E ++ DA
Sbjct: 344 EDKE-RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 378
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 433 bits (1116), Expect = e-149
Identities = 98/372 (26%), Positives = 174/372 (46%), Gaps = 19/372 (5%)
Query: 6 STTKVSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKT 65
SG ++ N R R A + Q ++L
Sbjct: 4 HHHHSSGVDNKFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLND 63
Query: 66 KQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVA 125
Q + T + + P + D+ K+F ++Y ++G G +A G A
Sbjct: 64 AQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFA 123
Query: 126 VKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 185
VK +E + ++++ E +RE IL+ +AGH +++ +++E ++++
Sbjct: 124 VKIMEVTAERLSPEQLEEVR-------EATRRETHILRQVAGHPHIITLIDSYESSSFMF 176
Query: 186 IAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245
+ +L GEL D + K +EK+ ++R +L + H + +VHRD+KPEN L
Sbjct: 177 LVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSI 298
++ ++ +DFG S ++PG+K +++ G+ Y+APE+LK G E D+W+
Sbjct: 235 ---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291
Query: 299 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
GVI + LL G PFW + + + + ++ + F W S++ KD + +LL DP AR
Sbjct: 292 GVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEAR 351
Query: 359 LTAAQALSHPWV 370
LTA QAL HP+
Sbjct: 352 LTAEQALQHPFF 363
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 425 bits (1096), Expect = e-147
Identities = 107/342 (31%), Positives = 171/342 (50%), Gaps = 24/342 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
++ D Y G+ LG GQF +K+ G + A K I+K + +
Sbjct: 6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK---------SSRRGV 56
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D + K+ TE
Sbjct: 57 SREDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTE 113
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDFIKPGKK 269
++A ++Q+L H + H D+KPEN + +K DFGL+ I G +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE 173
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 174 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 233
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 388
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++ L+
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ-------QALSR 286
Query: 389 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKN 430
V + K+FA R ++ L D F+A ++ +
Sbjct: 287 KASAVNMEKFKKFAARKKSNNG---SGGGLNDIFEAQKIEWH 325
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 421 bits (1084), Expect = e-145
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 16/314 (5%)
Query: 92 KDFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
++F+ Y + K LG G+F K+ G A K ++K +
Sbjct: 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-------------QD 70
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
++ E+ +L+ V+ + +E+ + + + +E GGE+ L + +E
Sbjct: 71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE 130
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
D +++Q+L H + +VH D+KP+N L S +K DFG+S I +
Sbjct: 131 NDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL 190
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I+G+ Y+APE+L +D+W+IG+I Y+LL PF + + + +
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV 250
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI-PIDISVLNN 388
D+ + + S+S A DF++ LLVK+P R TA LSH W+++ + P + S +
Sbjct: 251 DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQ 310
Query: 389 MRQFVKYSRLKQFA 402
+ S + +
Sbjct: 311 TQDHSVRSSEDKTS 324
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 415 bits (1070), Expect = e-144
Identities = 91/296 (30%), Positives = 155/296 (52%), Gaps = 18/296 (6%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
F Y + + LG G F K G A K I K+ R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-------------D 48
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
+ ++RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E
Sbjct: 49 FQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEA 105
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ + + +
Sbjct: 106 DASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH 165
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
G+ Y++PEVLK+ D+W+ GVI YILL G PFWD+ + ++ ++ D
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 225
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIPIDISV 385
+ W +++ AK + +L +P+ R+TA QAL PW+ AS I +V
Sbjct: 226 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTV 281
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 413 bits (1063), Expect = e-142
Identities = 97/335 (28%), Positives = 154/335 (45%), Gaps = 35/335 (10%)
Query: 93 DFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
Y + K +LG G G + G + A+K + +
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP------------------ 66
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSR 207
++EV +G ++V + +E+ + I ME EGGEL RI + D
Sbjct: 67 --KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA 124
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+TE++AA ++R + H H + HRD+KPEN L+ S ++D+ LK TDFG +
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 268 KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK 322
Q + YYVAPEVL + D+WS+GVI YILLCG PF+ T G+ +
Sbjct: 185 -ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + F W +S AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 244 RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH 303
Query: 383 IS-VLNNMRQFVKYSRLKQFALRALAS-TLDDEEL 415
+ VL + +K+ ALA+ +D +++
Sbjct: 304 TARVLQEDKDHWD--EVKEEMTSALATMRVDYDQV 336
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 410 bits (1056), Expect = e-141
Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 25/311 (8%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKI-LI 136
+P T F Y ++LG G K AVK I+
Sbjct: 4 AALPGSHST-----HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF 58
Query: 137 RVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL 196
Q+L+ E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL
Sbjct: 59 SAEEVQELR-------EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL 111
Query: 197 LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256
D + K +EK+ ++R +L V H +VHRD+KPEN L +D ++K T
Sbjct: 112 FDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLT 166
Query: 257 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGR 309
DFG S + PG+K +++ G+ Y+APE+++ G E D+WS GVI Y LL G
Sbjct: 167 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
Query: 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
PFW + + + + ++ F W S++ KD V + LV P+ R TA +AL+HP+
Sbjct: 227 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
Query: 370 VREGGDASEIP 380
++
Sbjct: 287 FQQYVVEEVRH 297
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 411 bits (1057), Expect = e-138
Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 27/430 (6%)
Query: 42 RNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG 101
D + + + + K ++ + Y I
Sbjct: 103 PGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIH 162
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+ LG G FG + T++A G+ A K + E V++E++
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPH---------------ESDKETVRKEIQT 207
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ L H +V ++AFEDDN + + E GGEL +++ + + +E +A +RQ+
Sbjct: 208 MSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVC 265
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
+ H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A + A
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAA 324
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PEV + K G +D+WS+GV++YILL G PF + +D + V + + IS
Sbjct: 325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS 384
Query: 341 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG-GDASEIPIDISVLNNMRQFVKYSRLK 399
KDF++KLL+ DP R+T QAL HPW+ G + I S +R +K
Sbjct: 385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIK--TKY 442
Query: 400 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 459
L +++ + + + + +A + + K + V E
Sbjct: 443 DAWPEPLPPL---GRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIV-KPYGTEVGEGQ 498
Query: 460 QA-IDCNTDG 468
A C
Sbjct: 499 SANFYCRVIA 508
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 401 bits (1032), Expect = e-137
Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 42/336 (12%)
Query: 91 DKDFDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
D F + Y + K LG G F K + AVK I K
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM-------------- 48
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ ++E+ L+ GH N+VK + F D + ++ MEL GGEL +RI KK
Sbjct: 49 ----EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK--H 102
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP- 266
++E +A+ ++R+++ + H G+VHRD+KPEN LF ++ +K DFG + P
Sbjct: 103 FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED------- 318
+ + + +Y APE+L + D+WS+GVI Y +L G+ PF
Sbjct: 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV 222
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
I K++ + F + W ++S AKD ++ LL DP RL + + W+++G S
Sbjct: 223 EIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSS 282
Query: 379 IPI---------DISVLNNMR-QFVKYSRLKQFALR 404
P+ +V ++ F +++ K+
Sbjct: 283 NPLMTPDILGSSGAAVHTCVKATFHAFNKYKREGFC 318
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 400 bits (1029), Expect = e-136
Identities = 106/363 (29%), Positives = 175/363 (48%), Gaps = 18/363 (4%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ + Y IG+ LG GQF +K+ G A K I+K + +
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR---------RGV 57
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
E+++REV IL+ + H N++ ++ +E+ V + +EL GGEL D + K+ +E
Sbjct: 58 CREEIEREVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSE 114
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDFIKPGKK 269
++A ++Q+L H + H D+KPEN + +K DFGL+ I+ G +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVS 234
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI--PIDISVL 386
DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + + L
Sbjct: 235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNL 294
Query: 387 NNMRQFVKYSRLKQ-FALRALASTLDDEELA-DLRDQFDAIDVDKNGSISLEEMRQALAK 444
N ++ R K F++ +L + L + + + ++ + R+AL
Sbjct: 295 ENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKALHP 354
Query: 445 DLP 447
Sbjct: 355 RRR 357
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 395 bits (1017), Expect = e-136
Identities = 96/292 (32%), Positives = 155/292 (53%), Gaps = 14/292 (4%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ Y +G+ LG GQF K G A K I+K ++ ++
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS---------SSRRGVSR 52
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E+++REV IL+ + H N++ ++ FE+ V + +EL GGEL D + K+ TE +
Sbjct: 53 EEIEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDE 109
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFGLSDFIKPGKKFQ 271
A ++Q+L H + H D+KPEN + + +K DFG++ I+ G +F+
Sbjct: 110 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 169
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+I G+ +VAPE++ + G E+D+WSIGVITYILL G PF +T+ + D
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
F + + + S AKDF+++LLVKDP+ R+T AQ+L H W++ + D
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGED 281
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 393 bits (1013), Expect = e-135
Identities = 78/326 (23%), Positives = 140/326 (42%), Gaps = 49/326 (15%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ D ++LG G G +K ++ A+K ++
Sbjct: 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------------------- 53
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDS 206
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D
Sbjct: 54 -CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 112
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+TE++A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG
Sbjct: 113 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF------ 166
Query: 267 GKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFK 322
A E K D+WS+GVI YILLCG PF+ G+
Sbjct: 167 --------------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 212
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 213 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH 272
Query: 383 ISVLNNMRQFVKYSRLKQFALRALAS 408
S + + ++ +K+ ALA+
Sbjct: 273 TSRVLKEDKE-RWEDVKEEMTSALAT 297
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 396 bits (1019), Expect = e-134
Identities = 106/388 (27%), Positives = 167/388 (43%), Gaps = 24/388 (6%)
Query: 48 KHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP-CGKRTDFGYDKDFDRRYTIGKLLGH 106
+ H H + + + + Y I + LG
Sbjct: 2 RGSHHHHHHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166
G FG + +KA G K I P+ VK E+ I+ L
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPY---------------PLDKYTVKNEISIMNQLH 106
Query: 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
H ++ ++AFED + + +E GGEL DRI A+ D + +E + +RQ
Sbjct: 107 -HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKH 164
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
H H +VH D+KPEN + ++ K+ SS+K DFGL+ + P + + +A + APE++
Sbjct: 165 MHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 287 RKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 345
R+ G +D+W+IGV+ Y+LL G PF + + + V R +F + S+S AKD
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 346 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQF---- 401
F+K LL K+PR RLT AL HPW++ I S N +RQ +K
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQP 343
Query: 402 ALRALASTLDDEELADLRDQFDAIDVDK 429
A+ +A+ + Q D+
Sbjct: 344 AIGRIANFSSLRKHRPQEYQIYDSYFDR 371
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 393 bits (1012), Expect = e-134
Identities = 102/323 (31%), Positives = 163/323 (50%), Gaps = 17/323 (5%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ + Y IG+ LG GQF +K+ G A K I+K + +
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR---------RGV 57
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ E+++REV IL+ + H NV+ ++ +E+ V + +EL GGEL D + K+ +E
Sbjct: 58 SREEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSE 114
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS-LKATDFGLSDFIKPGKK 269
++A ++Q+L H + H D+KPEN + +K DFGL+ I+ G +
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE 174
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
F++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ +
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVS 234
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI--PIDISVL 386
DF + + S AKDF++KLLVK+ R RLT +AL HPW+ + + + L
Sbjct: 235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNL 294
Query: 387 NNMRQFVKYSRLKQFALRALAST 409
N R+ R K + ++
Sbjct: 295 ENFRKQYVRRRWKL-SFSIVSLC 316
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 389 bits (1002), Expect = e-133
Identities = 103/323 (31%), Positives = 149/323 (46%), Gaps = 49/323 (15%)
Query: 90 YDKDFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
+ F+ Y + + +LG G + AVK IEK IR
Sbjct: 6 FSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR----------- 54
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY 208
V REV++L GH NV++ FE+++ Y+ E GG +L I ++ +
Sbjct: 55 ----SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR--HF 108
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
E +A+VVV+ + H G+ HRD+KPEN L + + S +K DF L IK
Sbjct: 109 NELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168
Query: 269 KFQDI--------VGSAYYVAPEVLKRKS------GPESDVWSIGVITYILLCGRRPFWD 314
I GSA Y+APEV++ S D+WS+GVI YILL G PF
Sbjct: 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
Query: 315 K---------------TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
+ ++ +F+ + K +F K W IS +AKD + KLLV+D + RL
Sbjct: 229 RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL 288
Query: 360 TAAQALSHPWVREGGDASEIPID 382
+AAQ L HPWV+ G A E +
Sbjct: 289 SAAQVLQHPWVQ--GCAPENTLP 309
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 390 bits (1004), Expect = e-132
Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 31/388 (7%)
Query: 20 NNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGV 79
++ +HH + + + +N + H E + + + S+R + +
Sbjct: 3 HHHHHHSSGVDLGTENLYFQSMKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSAL 62
Query: 80 I--------PCGKRTDFGYDKDFDRRYTIGKL--LGHGQFGYTYVATDKANGDRVAVKKI 129
P R + YT+ K LG G+FG + + A G ++A K I
Sbjct: 63 AVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKII 122
Query: 130 EKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAME 189
+ E+VK E+ ++ L H N+++ Y+AFE N + + ME
Sbjct: 123 KTRG---------------MKDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDIVLVME 166
Query: 190 LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249
+GGEL DRI+ + TE D + ++Q+ H ++H D+KPEN L + ++
Sbjct: 167 YVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RD 224
Query: 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 308
+K DFGL+ KP +K + G+ ++APEV+ +D+WS+GVI Y+LL G
Sbjct: 225 AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PF + +L + D + + IS AK+F+ KLL+K+ R++A++AL HP
Sbjct: 285 LSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHP 344
Query: 369 WVREGGDASEIPIDI--SVLNNMRQFVK 394
W+ + S + + ++ + FV
Sbjct: 345 WLSDHKLHSRLSAQKKKNRGSDAQDFVT 372
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 384 bits (989), Expect = e-131
Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 22/330 (6%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA+K I K K I D
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD------ 57
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 58 -PALNVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 112
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 270 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++ +
Sbjct: 233 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE------DMKRK 286
Query: 385 VLNNMRQFVKYSRLKQFALRALASTLDDEE 414
+ + + + + L Q + S E
Sbjct: 287 FQDLLSEENESTALPQVLAQPSTSRKRPRE 316
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 383 bits (985), Expect = e-130
Identities = 94/332 (28%), Positives = 154/332 (46%), Gaps = 33/332 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
F Y + + +G G + KA AVK I+K+K
Sbjct: 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----------------- 59
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
D E++IL H N++ + ++D YVY+ EL +GGELLD+IL +K ++E
Sbjct: 60 --RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSE 115
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-SSLKATDFGLSDFIKP-GK 268
++A+ V+ + + H G+VHRD+KP N L+ + S++ DFG + ++
Sbjct: 116 REASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEV 324
+A +VAPEVL+R+ D+WS+GV+ Y +L G PF D T + I +
Sbjct: 176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI 235
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
K W S+S++AKD V K+L DP RLTAA L HPW+ + ++
Sbjct: 236 GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQ 295
Query: 385 VLNNMRQ------FVKYSRLKQFALRALASTL 410
++ + + +R + L + +
Sbjct: 296 DAPHLVKGAMAATYSALNRNQSPVLEPVGRST 327
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 371 bits (954), Expect = e-125
Identities = 98/357 (27%), Positives = 150/357 (42%), Gaps = 64/357 (17%)
Query: 68 HQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK 127
H +S R+ G + ++Y + +G G +G VA + A+K
Sbjct: 4 HHHHSSGRENLYFQGGSL------LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIK 57
Query: 128 KIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIA 187
+ KNK ++ I P VE +K EV++++ L H N+ + Y +ED+ Y+ +
Sbjct: 58 IMNKNK----------IRQINPKDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLV 106
Query: 188 MELCEGGELLDRILAKK--------------------------------------DSRYT 209
MELC GG LLD++ D
Sbjct: 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQR 166
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 268
EK + ++RQ+ H G+ HRD+KPENFLF + + +K DFGLS
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNN 225
Query: 269 ----KFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
G+ Y+VAPEVL GP+ D WS GV+ ++LL G PF +
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
+VL K F + +S A+D + LL ++ R A +AL HPW+ + D
Sbjct: 286 SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 364 bits (935), Expect = e-121
Identities = 102/295 (34%), Positives = 152/295 (51%), Gaps = 16/295 (5%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
Y K Y + K LG G G +A ++ +VA++ I K K I D
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREAD------ 182
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+V+ E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R
Sbjct: 183 -PALNVETEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLK 237
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + QML H +G++HRD+KPEN L S +ED +K TDFG S +
Sbjct: 238 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 270 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEV 324
+ + G+ Y+APEVL D WS+GVI +I L G PF + +T+ + ++
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
K +F + W +S A D VKKLLV DP+AR T +AL HPW+++ +
Sbjct: 358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 412
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 344 bits (884), Expect = e-114
Identities = 87/439 (19%), Positives = 160/439 (36%), Gaps = 49/439 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ +LGHG G T V + VAVK+I
Sbjct: 25 SFCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILPECF------------------SFAD 65
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV++L+ H NV++++ +D + YIA+ELC L + + +KD + + +
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVE-QKDFAHLGLEPITL 123
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK----KF 270
++Q A H +VHRD+KP N L +KA +DFGL + G+ +
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 271 QDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
+ G+ ++APE+L D++S G + Y ++ + K+ +L
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG 243
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 386
P A++ ++K++ DP+ R +A L HP+ + D+S
Sbjct: 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVS-- 301
Query: 387 NNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL 446
++ L ++ L D R+ + +DL
Sbjct: 302 ----DRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQTDLR--KFRTYKGGSVRDL 355
Query: 447 PWKLKESR------VLEILQAIDCNTDGLVDF--SEFVAATLHVHQLEEHDSEKWHLRSQ 498
++ + E+ + + D V + S F H ++ E Q
Sbjct: 356 LRAMRNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMEL--CSHERLFQ 413
Query: 499 AAFEKFDIDRDGFITPEEL 517
+ + +TP+ L
Sbjct: 414 PYYFHEPPEPQPPVTPDAL 432
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 52/326 (15%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
+++ K+LG+G G T V G VAVK++ +
Sbjct: 9 FEQSLKNLVVSEKILGYGSSG-TVVFQGSFQGRPVAVKRMLIDF---------------- 51
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS--- 206
+ E+K+L H NV+++Y + D ++YIA+ELC L D + +K S
Sbjct: 52 --CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDEN 108
Query: 207 --RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------EDSSLK 254
E + ++RQ+ A H ++HRD+KP+N L ++ E+ +
Sbjct: 109 LKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168
Query: 255 ATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL--------KRKSGPESDVWSIGVI 301
+DFGL + G+ + G++ + APE+L KR+ D++S+G +
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 302 TYILLC-GRRPFWDK--TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
Y +L G+ PF DK E I + + + + + S+ A D + +++ DP R
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 359 LTAAQALSHPWVREGGDASEIPIDIS 384
TA + L HP E + +S
Sbjct: 288 PTAMKVLRHPLFWPKSKKLEFLLKVS 313
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 2e-82
Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 26/295 (8%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
D RRY G+ LG G F + +D + A K + K+ +
Sbjct: 9 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-------LKPHQ--- 58
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
E + E+ I ++LA H++VV F+ FED+++V++ +ELC LL+ +K T
Sbjct: 59 --REKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALT 113
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGK 268
E +A +RQ++ H + ++HRD+K N ED +K DFGL+ ++ G+
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE 170
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ + + G+ Y+APEVL +K E DVWSIG I Y LL G+ PF + + +N
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 328 KPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
++ P I+ A ++K+L DP AR T + L+ + G + +PI
Sbjct: 231 --EYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPI 280
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 259 bits (665), Expect = 2e-82
Identities = 90/321 (28%), Positives = 148/321 (46%), Gaps = 26/321 (8%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR 123
K P + + D RRY G+ LG G F + +D +
Sbjct: 9 KAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEV 68
Query: 124 VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY 183
A K + K+ + E + E+ I ++LA H++VV F+ FED+++
Sbjct: 69 FAGKIVPKSLL-------LKPHQ-----REKMSMEISIHRSLA-HQHVVGFHGFFEDNDF 115
Query: 184 VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243
V++ +ELC LL+ +K TE +A +RQ++ H + ++HRD+K N
Sbjct: 116 VFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 173
Query: 244 FKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVI 301
ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E DVWSIG I
Sbjct: 174 L---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCI 230
Query: 302 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLT 360
Y LL G+ PF + + +N ++ P I+ A ++K+L DP AR T
Sbjct: 231 MYTLLVGKPPFETSCLKETYLRIKKN--EYS---IPKHINPVAASLIQKMLQTDPTARPT 285
Query: 361 AAQALSHPWVREGGDASEIPI 381
+ L+ + G + +PI
Sbjct: 286 INELLNDEFFTSGYIPARLPI 306
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 257 bits (658), Expect = 1e-81
Identities = 63/316 (19%), Positives = 109/316 (34%), Gaps = 53/316 (16%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+ + + +LG G + K GD A+K
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--------------FLRP 50
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAK-KDSRY 208
V+ RE ++L+ L H+N+VK + E+ + + ME C G L +
Sbjct: 51 VDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIKPG 267
E + +V+R ++ +G+VHR++KP N + + S K TDFG + ++
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
Query: 268 KKFQDIVGSAYYVAPEVLKRKS---------GPESDVWSIGVITYILLCGRRPFWDKTED 318
++F + G+ Y+ P++ +R G D+WSIGV Y G PF
Sbjct: 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
Query: 319 GIFKEVLRN---------------------KPDFRRKPWPSISNSAKD----FVKKLLVK 353
KEV+ S+S + + +L
Sbjct: 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289
Query: 354 DPRARLTAAQALSHPW 369
D Q +
Sbjct: 290 DQEKCWGFDQFFAETS 305
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 256 bits (655), Expect = 4e-81
Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 42/318 (13%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK 131
+ +GV + F R Y+I K +G G + ++ A+K +
Sbjct: 4 HHHHSSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYV-- 60
Query: 132 NKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMEL 190
+L+ ++ + E+ L L H + +++ Y+ D Y+Y+ ME
Sbjct: 61 -----------NLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 108
Query: 191 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250
C +L + KK + + ML H HG+VH D+KP NFL D
Sbjct: 109 CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D 162
Query: 251 SSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDV 295
LK DFG+++ ++P VG+ Y+ PE +K S P+SDV
Sbjct: 163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222
Query: 296 WSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 353
WS+G I Y + G+ PF + + P+ + +D +K L +
Sbjct: 223 WSLGCILYYMTYGKTPFQQIINQISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKR 279
Query: 354 DPRARLTAAQALSHPWVR 371
DP+ R++ + L+HP+V+
Sbjct: 280 DPKQRISIPELLAHPYVQ 297
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 252 bits (645), Expect = 5e-80
Identities = 91/279 (32%), Positives = 141/279 (50%), Gaps = 23/279 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ +G LLG G F Y A G VA+K I+K + M V+ V+
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-------YKAGM-----VQRVQ 59
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
EVKI L H ++++ YN FED NYVY+ +E+C GE+ L + ++E +A
Sbjct: 60 NEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRY-LKNRVKPFSENEARHF 117
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVG 275
+ Q++ H HG++HRD+ N L +K DFGL+ +K P +K + G
Sbjct: 118 MHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCG 174
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y++PE+ R + G ESDVWS+G + Y LL GR PF T +V+ D+
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMP 232
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ +S AKD + +LL ++P RL+ + L HP++
Sbjct: 233 SF--LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 252 bits (646), Expect = 2e-79
Identities = 78/351 (22%), Positives = 137/351 (39%), Gaps = 49/351 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
R Y+I K +G G + ++ A+K + +L+ ++
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYV-------------NLEEADNQTLDS 53
Query: 155 VKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK +
Sbjct: 54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPWER 110
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD- 272
+ ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 166
Query: 273 --IVGSAYYVAPEVLKRKS------------GPESDVWSIGVITYILLCGRRPFWDKTE- 317
VG+ Y+ PE +K S P+SDVWS+G I Y + G+ PF
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226
Query: 318 -DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376
+ + P+ + +D +K L +DP+ R++ + L+HP+V+
Sbjct: 227 ISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 283
Query: 377 SEIPIDIS------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 421
+ VL + + + + A + L E +
Sbjct: 284 VNQMAKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLYEHYSGGESHNSSSS 333
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 6e-79
Identities = 69/311 (22%), Positives = 120/311 (38%), Gaps = 55/311 (17%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ + +LG G FG A + + A+KKI + +
Sbjct: 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL----------------S 47
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDN-------------YVYIAMELCEGGELLDRI 200
+ EV +L +L H+ VV++Y A+ + ++I ME CE G L D I
Sbjct: 48 TILSEVMLLASLN-HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106
Query: 201 LAKKDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259
++ ++D + RQ+L + H G++HRD+KP N E ++K DFG
Sbjct: 107 --HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFG 161
Query: 260 LS---------------DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 302
L+ + +G+A YVA EVL + D++S+G+I
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 303 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 362
+ ++ I K++ +F + K ++ L+ DP R A
Sbjct: 222 FEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
Query: 363 QALSHPWVREG 373
L+ W+
Sbjct: 280 TLLNSGWLPVK 290
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 251 bits (643), Expect = 2e-78
Identities = 87/419 (20%), Positives = 146/419 (34%), Gaps = 61/419 (14%)
Query: 25 HRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGK 84
H + + + K + QH + K N
Sbjct: 1 HHHHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVK------ 54
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
R Y+I K +G G + ++ A+K + + Q L
Sbjct: 55 ----------GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-----DNQTL 98
Query: 145 KMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK 203
+ E+ L L H + +++ Y+ D Y+Y+ ME C +L + K
Sbjct: 99 DSY--------RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--K 147
Query: 204 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
K + + ML H HG+VH D+KP NFL D LK DFG+++
Sbjct: 148 KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQ 203
Query: 264 IKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDVWSIGVITYILLCG 308
++P VG+ Y+ PE +K S P+SDVWS+G I Y + G
Sbjct: 204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
Query: 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+ PF I K P+ + +D +K L +DP+ R++ + L+HP
Sbjct: 264 KTPFQQIINQ-ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322
Query: 369 WVREGGDASEIPIDIS------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 421
+V+ + VL + + + + A + L E +
Sbjct: 323 YVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLYEHYSGGESHNSSSS 380
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 2e-77
Identities = 78/278 (28%), Positives = 136/278 (48%), Gaps = 24/278 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ IG+ LG G+FG Y+A +K + +A+K + K ++ + + ++
Sbjct: 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL-------EKAGV-----EHQLR 57
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV+I L H N+++ Y F D VY+ +E G + + +K S++ E+ A
Sbjct: 58 REVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATY 114
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+ ++ + CH ++HRD+KPEN L LK DFG S P + D+ G+
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHA-PSSRRTDLCGT 170
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+ PE+++ + + D+WS+GV+ Y L G+ PF T +K + R + F P
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P 227
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
++ A+D + +LL +P R + L HPW+
Sbjct: 228 -DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 243 bits (623), Expect = 2e-75
Identities = 64/316 (20%), Positives = 110/316 (34%), Gaps = 53/316 (16%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+ + + +LG G + K GD A+K L V
Sbjct: 5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV------------- 51
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAK-KDSRY 208
+ RE ++L+ L H+N+VK + E+ + + ME C G L +
Sbjct: 52 -DVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL 109
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLSDFIKPG 267
E + +V+R ++ +G+VHR++KP N + + S K TDFG + ++
Sbjct: 110 PESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
Query: 268 KKFQDIVGSAYYVAPEVLKRKS---------GPESDVWSIGVITYILLCGRRPFWDKTED 318
++F + G+ Y+ P++ +R G D+WSIGV Y G PF
Sbjct: 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229
Query: 319 GIFKEVLRNKP---------------------DFRRKPWPSISNSAKD----FVKKLLVK 353
KEV+ S+S + + +L
Sbjct: 230 RRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289
Query: 354 DPRARLTAAQALSHPW 369
D Q +
Sbjct: 290 DQEKCWGFDQFFAETS 305
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 241 bits (618), Expect = 2e-75
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 26/295 (8%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ ++ ++Y+ LG G FG+ + A DK V VK I+K K+L + I
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL-------EDCWIEDP 71
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL-CEGGELLDRILAKKDSRYT 209
+ V E+ IL + H N++K + FE+ + + ME G +L I R
Sbjct: 72 KLGKVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLD 128
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E A+ + RQ++ L ++HRD+K EN + ED ++K DFG + +++ GK
Sbjct: 129 EPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKL 185
Query: 270 FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
F G+ Y APEVL GPE ++WS+GV Y L+ PF + +E +
Sbjct: 186 FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEA 239
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+S V LL P R T + ++ PWV + + ++ +
Sbjct: 240 A--IHPPYL--VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWE 290
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 2e-75
Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 28/283 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + + LG G +G +A ++ + VAVK ++ + + E++K
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---------DC-----PENIK 53
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI E DA
Sbjct: 54 KEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRF 110
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 273
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + + + +
Sbjct: 111 FHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 274 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPD 330
G+ YVAPE+LKR+ DVWS G++ +L G P+ ++ + +
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK--K 225
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
PW I ++ + K+LV++P AR+T W +
Sbjct: 226 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 239 bits (612), Expect = 5e-75
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 24/290 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ IG+ LG G+FG Y+A +K N +A+K + K+++ + + ++
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-------EKEGV-----EHQLR 62
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE++I L H N+++ YN F D +Y+ +E GEL + +K R+ E+ +A
Sbjct: 63 REIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATF 119
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+ ++ CH ++HRD+KPEN L LK DFG S P + + + G+
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGWS-VHAPSLRRRTMCGT 175
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+ PE+++ K+ + D+W GV+ Y L G PF + + ++ D + P
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPP 233
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISV 385
+ +S+ +KD + KLL P RL + HPWV+ P+ S
Sbjct: 234 F--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQST 281
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 238 bits (609), Expect = 8e-75
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 24/279 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y +G LG G FG + + G +VAVK + + KI + L + V +K
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-------RSLDV-----VGKIK 59
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE++ L+ H +++K Y ++ ME GGEL D I R E +A +
Sbjct: 60 REIQNLKLFR-HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRL 116
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L CH H +VHRD+KPEN L + K DFGLS+ + G+ + GS
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGEFLRTSCGS 173
Query: 277 AYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
Y APEV+ + +GPE D+WS GVI Y LLCG PF D+ +FK++ F
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIP 231
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ ++ S + +L DP R T H W ++
Sbjct: 232 EY--LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 2e-74
Identities = 94/357 (26%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY K +G G FG + DK + VAVK IE+ + E+V+
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----------------DENVQ 64
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ ++L H N+V+F ++ I ME GGEL +RI R++E +A
Sbjct: 65 REIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG--RFSEDEARFF 121
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L + CH + HRD+K EN L LK DFG S + + VG+
Sbjct: 122 FQQLLSGVSYCHSMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 180
Query: 277 AYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFR 332
Y+APEVL R+ G +DVWS GV Y++L G PF D E +++ ++ +
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS-------- 384
IS + ++ V DP R++ + +H W + A + +
Sbjct: 241 IPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPE 300
Query: 385 --------VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 433
++ + + + + + LD ++ D D ID+D +G I
Sbjct: 301 QPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDFDSESEIDIDSSGEI 357
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 5e-74
Identities = 75/322 (23%), Positives = 125/322 (38%), Gaps = 34/322 (10%)
Query: 65 TKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
TK Q + T P G + + F+ Y +G LLG G FG + + +V
Sbjct: 4 TKPLQGPPAPPGTPTPPPGGKDR----EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQV 59
Query: 125 AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL---AGHENVVKFYNAFEDD 181
A+K I +N++L + EV +L + GH V++ + FE
Sbjct: 60 AIKVIPRNRVLGWSPLSDSVT---------CPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110
Query: 182 NYVYIAMEL-CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240
+ +E +L D I K E + Q++ CH G+VHRD+K E
Sbjct: 111 EGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDE 168
Query: 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSI 298
N L K DFG + + D G+ Y PE + R + VWS+
Sbjct: 169 NILIDL--RRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSL 225
Query: 299 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
G++ Y ++CG PF +E+L + +S +++ L P +R
Sbjct: 226 GILLYDMVCGDIPFERD------QEILEA--ELHFPAH--VSPDCCALIRRCLAPKPSSR 275
Query: 359 LTAAQALSHPWVREGGDASEIP 380
+ + L PW++ + +
Sbjct: 276 PSLEEILLDPWMQTPAEDVPLN 297
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 9e-74
Identities = 87/330 (26%), Positives = 141/330 (42%), Gaps = 26/330 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + + LG G +G +A ++ + VAVK ++ + + E++K
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---------DC-----PENIK 53
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI E DA
Sbjct: 54 KEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRF 110
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 273
Q++ H G+ HRD+KPEN L E +LK +DFGL+ + + + +
Sbjct: 111 FHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 274 VGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ YVAPE+LKR+ DVWS G++ +L G P+ D+ D + +
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKT 226
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ 391
PW I ++ + K+LV++P AR+T W + ++
Sbjct: 227 YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSES 286
Query: 392 FVKYSRLKQFALRALASTLDDEELADLRDQ 421
+S+ Q L +
Sbjct: 287 PSGFSKHIQSNLDFSPVNSASRTPGSGWSK 316
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 239 bits (610), Expect = 9e-74
Identities = 55/363 (15%), Positives = 103/363 (28%), Gaps = 34/363 (9%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLK-TKQHQKTNSRRQTGVIPCGKRTDFGYD-KDFD 95
+H D+ + + +E Y + + K+ V P T +
Sbjct: 2 SHMEAGDSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGE 61
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ------DLKMILP 149
R+ + + L G ++ D + A+K R + +L
Sbjct: 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121
Query: 150 IAVEDVKREVKILQA-----LAGHENVVKFYNAFEDDNY--VYIAMELCEG-----GELL 197
+ E+ + ++L + + +D + M L
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257
D + + ++ Q++R+AA GLVH P+N D L D
Sbjct: 182 DFVYVFR-GDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLGD 237
Query: 258 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWD 314
K G + Y E L + + W +G+ Y + C PF
Sbjct: 238 VSAL--WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295
Query: 315 KTEDGIFKEVL-----RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
T + + K + + L D R RL +A+ P
Sbjct: 296 VTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE 355
Query: 370 VRE 372
+
Sbjct: 356 FLQ 358
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 1e-73
Identities = 93/307 (30%), Positives = 145/307 (47%), Gaps = 34/307 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y + K +G G F +A G VA+K I+K ++ P +++ +
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-------------PTSLQKLF 62
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV+I++ L H N+VK + E + +Y+ ME GGE+ D ++A R EK+A
Sbjct: 63 REVRIMKILN-HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSK 119
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
RQ++ CH +VHRD+K EN L D ++K DFG S+ G K G+
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSNEFTVGGKLDAFCGA 176
Query: 277 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
Y APE+ + K GPE DVWS+GVI Y L+ G PF + + + VLR +R
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR--GKYRIP 234
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP---------IDISV 385
+ +S ++ +K+ LV +P R T Q + W+ G + E+ D
Sbjct: 235 FY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKR 292
Query: 386 LNNMRQF 392
++ M
Sbjct: 293 IDIMVGM 299
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 236 bits (603), Expect = 5e-73
Identities = 65/324 (20%), Positives = 124/324 (38%), Gaps = 35/324 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKI--LIRVVSFQDLKMILPIAVED 154
Y I + L G+F + A+KK EK+ + + K+ + +D
Sbjct: 32 DYRIIRTLNQGKFNKIILCEKD--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------DSRY 208
K E++I+ + +E + + + VYI E E +L
Sbjct: 90 FKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 209 TEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ +++ +L + H + HRD+KP N L ++ +K +DFG S+
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKLSDFGESE-YMVD 204
Query: 268 KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKE 323
KK + G+ ++ PE + +G + D+WS+G+ Y++ PF K + +F
Sbjct: 205 KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN 264
Query: 324 VLRNKPDF---------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+ ++ +SN DF+K L K+P R+T+ AL H
Sbjct: 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324
Query: 369 WVREGGDASEIPIDISVLNNMRQF 392
W+ + + ++
Sbjct: 325 WLADTNIEDLREFSKELYKKRKKL 348
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 6e-72
Identities = 96/312 (30%), Positives = 144/312 (46%), Gaps = 33/312 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y +G LG G FG V + G +VAVK + + KI + L + V ++
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-------RSLDV-----VGKIR 64
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE++ L+ H +++K Y + +++ ME GGEL D I R EK++ +
Sbjct: 65 REIQNLKLFR-HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRL 121
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q+L CH H +VHRD+KPEN L + K DFGLS+ + G+ + GS
Sbjct: 122 FQQILSGVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSNMMSDGEFLRTSCGS 178
Query: 277 AYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
Y APEV+ + +GPE D+WS GVI Y LLCG PF D +FK++ F
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTP 236
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG---------DASEIPIDISV 385
+ ++ S +K +L DP R T H W ++ S ID
Sbjct: 237 QY--LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEA 294
Query: 386 LNNMRQFVKYSR 397
L + + + S
Sbjct: 295 LKEVCEKFECSE 306
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 232 bits (594), Expect = 8e-72
Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 33/311 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y I + LG G FG +AT +VA+K I + + + M V+
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLL-------KKSDM-----HMRVE 57
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ L+ L H +++K Y+ + + +E GGEL D I+ KK R TE +
Sbjct: 58 REISYLKLLR-HPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRF 113
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+Q++ CH H +VHRD+KPEN L ++ ++K DFGLS+ + G + GS
Sbjct: 114 FQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGS 170
Query: 277 AYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
Y APEV+ K +GPE DVWS G++ Y++L GR PF D+ +FK+V +
Sbjct: 171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--YVMP 228
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP--------IDISVL 386
+ +S A+ +++++V DP R+T + PW P D ++
Sbjct: 229 DF--LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIV 286
Query: 387 NNMRQFVKYSR 397
+ + + + +S
Sbjct: 287 SKLGEAMGFSE 297
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 3e-71
Identities = 73/342 (21%), Positives = 121/342 (35%), Gaps = 39/342 (11%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
H+HH+ Q + + + + + + + + G P + F
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRP------ESFFQ 56
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ + LGHG +G + K +G AVK+ +D L
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-----GPKDRARKL------- 104
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
EV + + H V+ A+E+ +Y+ ELC G L + E
Sbjct: 105 -AEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHC-EAWGASLPEAQVWG 161
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+R L A H GLVH D+KP N K DFGL + + G
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVELGTAGAGEVQEG 218
Query: 276 SAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF-----WDKTEDGIFKEVLRNKPD 330
Y+APE+L+ G +DV+S+G+ + C W + G
Sbjct: 219 DPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF----- 273
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+S+ + + +L DP+ R TA L+ P +R+
Sbjct: 274 -----TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 4e-70
Identities = 65/328 (19%), Positives = 125/328 (38%), Gaps = 44/328 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + + LG G FGY + G++VA+K+ + P E
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS--------------PKNRERWC 60
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAK-KDSRYT 209
E++I++ L H NVV + + +AME CEGG+L +
Sbjct: 61 LEIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK 119
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E ++ + H + ++HRD+KPEN + + + K D G + + G+
Sbjct: 120 EGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ VG+ Y+APE+L++K D WS G + + + G RPF + + +R K
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 239
Query: 329 PDFRRKPWPSISNS--------------------AKDFVKKLLVKDPRARLTAAQALSHP 368
+ + ++ + + +++ +L+ R R T Q +
Sbjct: 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVG 299
Query: 369 WVREGGDA-SEIPIDISVLNNMRQFVKY 395
+ S + + + + R
Sbjct: 300 CFQALDSILSLKLLSVMNMVSGRVHTYP 327
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 226 bits (579), Expect = 8e-70
Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 37/336 (11%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQ 108
H H H + ++ + + + +Y +G LLG G
Sbjct: 5 HHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKE---------KEPLESQYQVGPLLGSGG 55
Query: 109 FGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-G 167
FG Y ++ VA+K +EK++I V EV +L+ ++ G
Sbjct: 56 FGSVYSGIRVSDNLPVAIKHVEKDRI---------SDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 226
V++ + FE + + +E E +L D I + E+ A Q+L
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRH 164
Query: 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 286
CH G++HRD+K EN L LK DFG +K + D G+ Y PE ++
Sbjct: 165 CHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIR 221
Query: 287 RKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 344
G + VWS+G++ Y ++CG PF +E++R + + +S+ +
Sbjct: 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQ--VFFRQR--VSSECQ 271
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
++ L P R T + +HPW+++ E
Sbjct: 272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETA 307
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 225 bits (577), Expect = 8e-70
Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 27/293 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA----- 151
+YT+ +G G +G +A ++ + A+K + K K++ + +
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 152 ------VEDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAK 203
+E V +E+ IL+ L H NVVK +D ++++Y+ EL G +++
Sbjct: 74 IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--- 129
Query: 204 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+E A + +++ H ++HRD+KP N L ED +K DFG+S+
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE 186
Query: 264 IKPGKKF-QDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTED 318
K + VG+ ++APE L K SG DVW++GV Y + G+ PF D+
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ ++ +F P I+ KD + ++L K+P +R+ + HPWV
Sbjct: 247 CLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 222 bits (569), Expect = 9e-69
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 35/290 (12%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
Y + +G G +G K++G + K+++ + + + +M++
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-----TEAEKQMLV------- 53
Query: 156 KREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRI--LAKKDSRYTEK 211
EV +L+ L H N+V++Y+ D + +YI ME CEGG+L I K+ E+
Sbjct: 54 -SEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 212 DAAVVVRQMLRVAAECH-----LHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIK 265
V+ Q+ ECH H ++HRD+KP N FL ++K DFGL+ +
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILN 167
Query: 266 PGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
F + VG+ YY++PE + R S +SD+WS+G + Y L PF ++ + +
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
Query: 324 VLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ K P S+ + + ++L R + + L +P + E
Sbjct: 228 IREGKFR----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 224 bits (573), Expect = 2e-68
Identities = 72/312 (23%), Positives = 142/312 (45%), Gaps = 26/312 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y + +G G FG + +G + +K+I +++ S ++ +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-----SSKEREESR-------- 71
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV +L + H N+V++ +FE++ +YI M+ CEGG+L RI A+K + E
Sbjct: 72 REVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 217 VRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIV 274
Q+ H ++HRD+K +N FL K D +++ DFG++ + + + +
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTK----DGTVQLGDFGIARVLNSTVELARACI 186
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ YY++PE+ + K +SD+W++G + Y L + F + + +++
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF---- 242
Query: 334 KPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 392
P S + V +L ++PR R + L ++ + + P I+ ++ F
Sbjct: 243 PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTF 302
Query: 393 VKYSRLKQFALR 404
K+ A R
Sbjct: 303 SKFGSQPIPAKR 314
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 220 bits (563), Expect = 6e-68
Identities = 68/300 (22%), Positives = 117/300 (39%), Gaps = 50/300 (16%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
DK F + +L+G G FG + A + +G +K+++ N
Sbjct: 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----------------- 48
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFED----------------DNYVYIAMELCEGG 194
E +REVK L L H N+V + ++ ++I ME C+ G
Sbjct: 49 --EKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG 105
Query: 195 ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSL 253
L I ++ + + A + Q+ + H L++RD+KP N FL +
Sbjct: 106 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD----TKQV 161
Query: 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 312
K DFGL +K K G+ Y++PE + + G E D++++G+I LL
Sbjct: 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 221
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ F ++ K ++KLL K P R ++ L V +
Sbjct: 222 FET--SKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 6e-68
Identities = 51/388 (13%), Positives = 113/388 (29%), Gaps = 57/388 (14%)
Query: 37 HNHHARNDTTHKHQH----------QHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRT 86
H+HH + + + ++ N + +S T + G+
Sbjct: 3 HHHHHSSGRENLYFQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPF 62
Query: 87 DFG-YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
+ R G +LG ATD+ G+ V + Q +
Sbjct: 63 RVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKE 122
Query: 146 MIL----------PIAVEDVKREVKILQALA--GHENVVKFYNAFEDDN--YVYIAMELC 191
+L + R + + + +++ D +
Sbjct: 123 EVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM 182
Query: 192 EG--GELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247
+ + + + + Q++R+ A H +GLVH ++P + +
Sbjct: 183 QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD-- 240
Query: 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS------------GPESDV 295
+ + T F S + PE+ R++ D
Sbjct: 241 -QRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDA 296
Query: 296 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 355
W++G++ Y + C P G + + R+ + I + ++ L
Sbjct: 297 WALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPK 348
Query: 356 RARLTAAQALSHPWVREGGD--ASEIPI 381
RL QA+ P + ++ +P+
Sbjct: 349 EDRLLPLQAMETPEYEQLRTELSAALPL 376
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 220 bits (564), Expect = 1e-67
Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 32/308 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y +G LLG G +G D R AVK ++K K+ +P +VK
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR-----------RIPNGEANVK 54
Query: 157 REVKILQALAGHENVVKFYN--AFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKD 212
+E+++L+ L H+NV++ + E+ +Y+ ME C G E+LD + K R+
Sbjct: 55 KEIQLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK---RFPVCQ 110
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKK 269
A Q++ H G+VH+D+KP N L +LK + G++
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADDT 167
Query: 270 FQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
+ GS + PE+ SG + D+WS GV Y + G PF +F+ + +
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK 227
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 386
+ D +K +L +P R + Q H W R+ +E P+ I
Sbjct: 228 G--SYAIPGD--CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPS 283
Query: 387 NNMRQFVK 394
+ + +
Sbjct: 284 PDTKDRWR 291
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 4e-64
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 16/199 (8%)
Query: 363 QALSHPWVRE-GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 421
H RE + + ++L N++ F K + LK+ AL +A L D E+ +LR+
Sbjct: 3 HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62
Query: 422 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481
F A+DVD +G++S +E+ L K + ++ + ++L+ ID N G + +++F+AAT+
Sbjct: 63 FIALDVDNSGTLSSQEILDGL-KKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121
Query: 482 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEE 533
+ + F+ FDID +G I+ EEL+ G +ID LL+E
Sbjct: 122 KQTYLKKE----VCL--IPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQE 175
Query: 534 ADIDKDGRISLSEFRRLLR 552
D++ DG I EF ++
Sbjct: 176 VDLNGDGEIDFHEFMLMMS 194
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 6e-63
Identities = 61/327 (18%), Positives = 113/327 (34%), Gaps = 45/327 (13%)
Query: 63 LKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGD 122
+ + H +S + + G ++ Y + LG G F Y + +G
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGHMVIID-----NKHYLFIQKLGEGGFSYVDLVEGLHDGH 55
Query: 123 RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDD- 181
A+K+I ++ QD E+ +RE + + H N+++ +
Sbjct: 56 FYALKRILCHEQ-------QDR--------EEAQREADMHRLF-NHPNILRLVAYCLRER 99
Query: 182 ---NYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236
+ ++ + + G L + I L K + TE ++ + R H G HRD
Sbjct: 100 GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRD 159
Query: 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----------IVGSAYYVAPEVLK 286
+KP N L + D G + + + Y APE+
Sbjct: 160 LKPTNILLGD---EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216
Query: 287 RKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 342
+S +DVWS+G + Y ++ G P+ + G L + P S++
Sbjct: 217 VQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV-ALAVQNQLSIPQSPRHSSA 275
Query: 343 AKDFVKKLLVKDPRARLTAAQALSHPW 369
+ ++ DP R LS
Sbjct: 276 LWQLLNSMMTVDPHQRPHIPLLLSQLE 302
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191 | Back alignment and structure |
|---|
Score = 201 bits (514), Expect = 5e-62
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 365 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 424
+ H G + I VL N + + + ++ A+ +A +D ++ L+ F
Sbjct: 1 MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60
Query: 425 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484
+D D G I+ E++++ L K KL + +L ID + G +D++EF+AA L Q
Sbjct: 61 LDEDGKGYITKEQLKKGLEK-DGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIAAALDRKQ 118
Query: 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--------IDPLLEE 533
L + + AF FD+D DG IT EL + KG+ + ++ +
Sbjct: 119 LSKK-----LIY--CAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRD 171
Query: 534 ADIDKDGRISLSEFRRLLR 552
D + DG+I EF +++
Sbjct: 172 VDKNNDGKIDFHEFSEMMK 190
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 3e-60
Identities = 74/291 (25%), Positives = 122/291 (41%), Gaps = 26/291 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ I K +G GQF Y A +G VA+KK+ ++ D K A D
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV-------QIFDLMDAK-----ARADCI 80
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAA 214
+E+ +L+ L H NV+K+Y +F +DN + I +EL + G+L I K+ E+
Sbjct: 81 KEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKF-QD 272
Q+ H ++HRD+KP N F+ +K D GL F
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITA----TGVVKLGDLGLGRFFSSKTTAAHS 195
Query: 273 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKP 329
+VG+ YY++PE + +SD+WS+G + Y + + PF+ + + K++ +
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-- 253
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
D+ P S + V + DP R AS +
Sbjct: 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 195 bits (497), Expect = 4e-58
Identities = 61/300 (20%), Positives = 121/300 (40%), Gaps = 44/300 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ + + +G G+FG + + +G A+K+ + +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS-------------KKPLAGSVDE 54
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTE 210
++ REV L H +VV++++A+ +D+++ I E C GG L D I + S + E
Sbjct: 55 QNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKE 114
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS---------------AKEDSSLK 254
+ ++ Q+ R H LVH D+KP N F+ ++ A K
Sbjct: 115 AELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF 312
D G I + G + ++A EVL+ P++D++++ +T + G P
Sbjct: 175 IGDLGHVTRISSPQVE---EGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPL 230
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ + E+ + + P +S + +K ++ DP R +A + H +
Sbjct: 231 PRNGDQ--WHEIRQGRLP----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL 284
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 1e-56
Identities = 72/313 (23%), Positives = 119/313 (38%), Gaps = 52/313 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + LG G FG + A +K + A+K+I +A E V
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--------------RELAREKVM 51
Query: 157 REVKILQALAGHENVVKFYNAFEDDN------------YVYIAMELCEGGELLDRILAKK 204
REVK L L H +V+++NA+ + N Y+YI M+LC L D + +
Sbjct: 52 REVKALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC 110
Query: 205 DSRYTEKDAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-- 261
E+ + + Q+ H GL+HRD+KP N F D +K DFGL
Sbjct: 111 TIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTA 167
Query: 262 -----------DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 309
+ + VG+ Y++PE + S + D++S+G+I + LL
Sbjct: 168 MDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225
Query: 310 RPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
PF + E +V K + V+ +L P R A + +
Sbjct: 226 -PFSTQMERVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENA 281
Query: 369 WVREGGDASEIPI 381
+ + +
Sbjct: 282 VFEDLDFPGKTVL 294
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-56
Identities = 55/380 (14%), Positives = 117/380 (30%), Gaps = 43/380 (11%)
Query: 23 NHHRNANKEEAKRRHNHHARN-DTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP 81
+HH +++ E + + ++ N + +S T +
Sbjct: 3 HHHHHSSGRENLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWN 62
Query: 82 CGKRTDFG-YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
G+ + R G +LG ATD+ G+ V +
Sbjct: 63 TGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAI 122
Query: 141 FQDLKMILPIA-------VEDVKREVKILQA--LAGHENVVKFYNAFEDDNYVYIAMEL- 190
Q + +L + + K ++ + L K D+ +++
Sbjct: 123 KQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFF 182
Query: 191 ------CEGGELLDRILAKKDSRYTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENF 242
+ +L+ + + A + Q++R+ A H +GLVH ++P +
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDI 242
Query: 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPEVL------KRKSGPE 292
+ + + T F ++ G +G + A +L
Sbjct: 243 VLD---QRGGVFLTGFEHL--VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297
Query: 293 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 352
D W++G+ Y + C P D G + + R+ + I + ++ L
Sbjct: 298 FDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLR 349
Query: 353 KDPRARLTAAQALSHPWVRE 372
RL QA+ P +
Sbjct: 350 YPKEDRLLPLQAMETPEYEQ 369
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 192 bits (489), Expect = 2e-56
Identities = 63/302 (20%), Positives = 116/302 (38%), Gaps = 51/302 (16%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
+ R + ++L G F + Y A D +G A+K++ N+ + + I
Sbjct: 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE-------EKNRAI------- 72
Query: 155 VKREVKILQALAGHENVVKFYNAF--------EDDNYVYIAMELCEGGELLDRILAKKDS 206
+EV ++ L+GH N+V+F +A + ELC+G + +
Sbjct: 73 -IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
+ + Q R H ++HRD+K EN L + ++K DFG + I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATTI 188
Query: 265 KPGKKFQDI-------------VGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLC 307
+ + Y PE++ S G + D+W++G I Y+L
Sbjct: 189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 308 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ PF EDG ++ K + P + ++ +L +P RL+ A+ +
Sbjct: 249 RQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302
Query: 368 PW 369
Sbjct: 303 LQ 304
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 5e-54
Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 11/172 (6%)
Query: 390 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 449
+QF ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++ L K +
Sbjct: 1 KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL-KRVGAN 59
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
LKES +L+++QA D + G +D+ EF+AATLH++++E D HL AAF FD D
Sbjct: 60 LKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 510 GFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 557
G+ITP+EL+ G I+ L+ + D D DGRI +EF +++ SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 165
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 7e-54
Identities = 75/333 (22%), Positives = 119/333 (35%), Gaps = 41/333 (12%)
Query: 51 HQHQERAKNYQQLKTKQHQ---KTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHG 107
H AK + K + +T + K D+ Y ++ T +G G
Sbjct: 11 HSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEV-HWMTHQPRVGRG 69
Query: 108 QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167
FG + DK G + AVKK+ E+ L+
Sbjct: 70 SFGEVHRMKDKQTGFQCAVKKVRLEVFR--------------------VEELVACAGLS- 108
Query: 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 227
+V Y A + +V I MEL EGG L L K+ E A + Q L
Sbjct: 109 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLGQALEGLEYL 166
Query: 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK------KFQDIVGSAYYVA 281
H ++H D+K +N L + + S DFG + ++P I G+ ++A
Sbjct: 167 HTRRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMA 224
Query: 282 PEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPS 338
PEV+ K + D+WS + +L G P+ K + P R P PS
Sbjct: 225 PEVVMGKPCDAKVDIWSSC-CMMLHMLNGCHPWTQYFRGPLCLK-IASEPPPIREIP-PS 281
Query: 339 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ +++ L K+P R +A +
Sbjct: 282 CAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 2e-53
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 381 IDISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEM 438
I +VLNNM+ ++K+S ++ + +A L + + + + F +D + NGS+S E+
Sbjct: 2 ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61
Query: 439 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498
LA +K+ + ILQA+D N G + ++EF+A +E L+
Sbjct: 62 YTVLAS---VGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIEST-----FLK-- 111
Query: 499 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDG--------RISLSE 546
AAF K D D DG+I+ ++ K ID K G +IS E
Sbjct: 112 AAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQE 171
Query: 547 FRRLLRT 553
F+ + +
Sbjct: 172 FKDYMLS 178
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191 | Back alignment and structure |
|---|
Score = 179 bits (455), Expect = 3e-53
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 21/189 (11%)
Query: 380 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEM 438
L NM++F +L Q A+ + S L EE +L F +D + +G + +E+
Sbjct: 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKEL 62
Query: 439 RQALAKDLPW----------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488
+ K + W E+ V ILQ++D + +G +++SEFV + L
Sbjct: 63 IEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSR 122
Query: 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISL 544
+ L AAF++FD D G IT EEL G+ + +L+E D + DG +
Sbjct: 123 E----RLL--AAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDF 176
Query: 545 SEFRRLLRT 553
EF +++
Sbjct: 177 EEFVEMMQK 185
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 7e-53
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+LG G +G Y D +N R+A+K+I +D + + +
Sbjct: 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIP----------ERDSRYS-----QPLH 67
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAA 214
E+ + + L H+N+V++ +F ++ ++ I ME GG L +L K E+
Sbjct: 68 EEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIG 125
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDI 273
+Q+L H + +VHRD+K +N L + LK +DFG S + +
Sbjct: 126 FYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETF 183
Query: 274 VGSAYYVAPEVLKRKS---GPESDVWSIGVITYI-LLCGRRPFWDKTEDG--IFK-EVLR 326
G+ Y+APE++ + G +D+WS+G T I + G+ PF++ E +FK + +
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLG-CTIIEMATGKPPFYELGEPQAAMFKVGMFK 242
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378
P+ P S+S AK F+ K DP R A L +++ +
Sbjct: 243 VHPEI---P-ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKK 290
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 183 bits (465), Expect = 9e-53
Identities = 55/297 (18%), Positives = 97/297 (32%), Gaps = 44/297 (14%)
Query: 95 DRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
+ + LLG G F Y AT D N + +K + + +
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP-------WEFYIG-- 114
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS--- 206
+ ++ L+ +KFY+A N + EL G LL+ I K++
Sbjct: 115 ------TQLMERLKPSM-QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEK 167
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS--------AKEDSSLKATDF 258
+ +ML + + H ++H D+KP+NF+ + + L D
Sbjct: 168 VMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDL 227
Query: 259 GLSDFIK---PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWD 314
G S +K G F ++ + E+L K + D + + Y +L G
Sbjct: 228 GQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287
Query: 315 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
E G K + W +F +L L + L +
Sbjct: 288 N-EGGECKPEGLFRRLPHLDMW-------NEFFHVMLNIPDCHHLPSLDLLRQKLKK 336
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 2e-51
Identities = 90/292 (30%), Positives = 135/292 (46%), Gaps = 44/292 (15%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+DF GK+LG G F +A + A A+K +EK I+
Sbjct: 30 EDFK----FGKILGEGSFSTVVLARELATSREYAIKILEKRHII-------KENK----- 73
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V V RE ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 74 VPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDET 130
Query: 212 DAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS---DFI 264
++ V+A +LH G++HRD+KPEN L + ++ TDFG +
Sbjct: 131 CTRFYTAEI--VSALEYLHGKGIIHRDLKPENILL-----NEDMHIQITDFGTAKVLSPE 183
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+ VG+A YV+PE+L KS SD+W++G I Y L+ G PF E IF++
Sbjct: 184 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQK 243
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA------LSHPW 369
+++ + DF P A+D V+KLLV D RL + +HP+
Sbjct: 244 IIKLEYDF---P-EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 1e-48
Identities = 79/318 (24%), Positives = 146/318 (45%), Gaps = 44/318 (13%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQD 143
D +D + + +L+G+G +G Y G A+K ++ V+ +
Sbjct: 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD--------VTGDE 63
Query: 144 LKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELL 197
E++K+E+ +L+ + H N+ +Y AF D+ +++ ME C G +
Sbjct: 64 --------EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT 115
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 257
D I K + E+ A + R++LR + H H ++HRD+K +N L E++ +K D
Sbjct: 116 DLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVD 172
Query: 258 FGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVITYI-LLCGR 309
FG+S + + +G+ Y++APEV+ P++ D+WS+G IT I + G
Sbjct: 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG-ITAIEMAEGA 231
Query: 310 RPFWD----KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
P D + +F P + K W S + F++ LVK+ R Q +
Sbjct: 232 PPLCDMHPMRA---LFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLM 285
Query: 366 SHPWVREGGDASEIPIDI 383
HP++R+ + ++ I +
Sbjct: 286 KHPFIRDQPNERQVRIQL 303
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 6e-48
Identities = 57/292 (19%), Positives = 110/292 (37%), Gaps = 33/292 (11%)
Query: 91 DKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
D R+ +G G F Y D VA ++ + +
Sbjct: 20 GMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL-------------QDRKLTK 66
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKD 205
+ K E ++L+ L H N+V+FY+++E + + EL G L K+
Sbjct: 67 SERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT--YLKRF 123
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
K RQ+L+ LH ++HRD+K +N S+K D GL+
Sbjct: 124 KVMKIKVLRSWCRQILK--GLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLA 179
Query: 262 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-I 320
+K + ++G+ ++APE+ + K DV++ G+ + P+ + I
Sbjct: 180 T-LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI 238
Query: 321 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ V K+ ++ + ++ R + L+H + +E
Sbjct: 239 YRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 1e-47
Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 30/332 (9%)
Query: 52 QHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGY 111
H + L T+ + R D +G G G
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVD-QGDPRLLLDSYVKIGEGSTGI 60
Query: 112 TYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171
+A +K +G +VAVK ++ K Q + E + EV I++ H NV
Sbjct: 61 VCLAREKHSGRQVAVKMMDLRK--------QQRR-------ELLFNEVVIMRDYQ-HFNV 104
Query: 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 231
V+ Y ++ +++ ME +GG L D + R E+ A V +L+ A H G
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQG 161
Query: 232 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS- 289
++HRD+K ++ L D +K +DFG I K + +VG+ Y++APEV+ R
Sbjct: 162 VIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLY 218
Query: 290 GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFV 347
E D+WS+G I I ++ G P++ + + + P + +S +DF+
Sbjct: 219 ATEVDIWSLG-IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS--HKVSPVLRDFL 275
Query: 348 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
+++LV+DP+ R TA + L HP++ + G +
Sbjct: 276 ERMLVRDPQERATAQELLDHPFLLQTGLPECL 307
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 5e-47
Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 31/230 (13%)
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPR------ARLTAAQALSHPWVREGGDASEIPIDISV 385
R + I+ ++ KL D + AR A + A + + +
Sbjct: 39 RDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAAR--GDAAAEKQRLASLL 96
Query: 386 LNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 445
+ Y+RL+ L +E+ LR F + V +G S ++++Q LAK
Sbjct: 97 KDLEDDASGYNRLRPSK-----PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK- 150
Query: 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 505
+ E + ++ ++ +T G + + VA + L A F K D
Sbjct: 151 YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAAL------------VADFRKID 198
Query: 506 IDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 550
+ +G ++ +E R + K D L AD D+ + SE+ L
Sbjct: 199 TNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHL 248
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 474
L LR + D DK+G +S EE+++ L + + +D + + + E
Sbjct: 252 LLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQE 311
Query: 475 FVAATLHVHQLE 486
FV L + +
Sbjct: 312 FVMLVLLMFHDD 323
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 2e-46
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 29/293 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D ++YT + +G G G Y A D A G VA++++ + Q K
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKK----- 61
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
E + E+ +++ + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 62 --ELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDE 115
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-K 269
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I P + K
Sbjct: 116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 172
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLR 326
+VG+ Y++APEV+ RK+ GP+ D+WS+G I I ++ G P+ ++ ++
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG-IMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
P+ + +S +DF+ + L D R +A + L H +++ S +
Sbjct: 232 GTPELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 3e-46
Identities = 85/302 (28%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D D + + I LG G FG Y A +K G A K IE ++
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EE------- 58
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ED E++IL H +VK A+ D ++I +E C GG + I+ + D TE
Sbjct: 59 ELEDYIVEIEILATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLTE 116
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-K 269
VV RQML H ++HRD+K N L + ++ DFG+S K
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSAKNLKTLQK 173
Query: 270 FQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVITYI-LLCGRRPFWD----KTED 318
+G+ Y++APEV+ ++ ++ D+WS+G IT I + P + +
Sbjct: 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG-ITLIEMAQIEPPHHELNPMRV-- 230
Query: 319 GIFKEVLRNKPDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377
+ K + P W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 231 -LLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNK 286
Query: 378 EI 379
+
Sbjct: 287 AL 288
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 5e-45
Identities = 85/342 (24%), Positives = 143/342 (41%), Gaps = 32/342 (9%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTN-SRRQTGVIPCGKRTDFGYDKDFDRRYTIGKL 103
+ + H H H + L + + + G + + + D ++ ++ +
Sbjct: 2 SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLRE 61
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+GHG FG Y A D N + VA+KK+ S + +D+ +EV+ LQ
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMS--------YSGKQSN----EKWQDIIKEVRFLQ 109
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
L H N +++ + ++ ++ ME C G D +L E + A V L+
Sbjct: 110 KLR-HPNTIQYRGCYLREHTAWLVMEYCLGS-ASD-LLEVHKKPLQEVEIAAVTHGALQG 166
Query: 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 283
A H H ++HRD+K N L E +K DFG + + P F VG+ Y++APE
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANSF---VGTPYWMAPE 220
Query: 284 VLKRKS----GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWP 337
V+ + DVWS+G IT I L + P ++ ++ P + W
Sbjct: 221 VILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW- 278
Query: 338 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
S ++FV L K P+ R T+ L H +V + I
Sbjct: 279 --SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVI 318
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-44
Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 28/292 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D + +T + +G G FG + D VA+K I DL+
Sbjct: 17 KADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII-------------DLEEAED- 62
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ED+++E+ +L V K+Y ++ D ++I ME GG LD + + E
Sbjct: 63 EIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDE 118
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKK 269
A ++R++L+ H +HRD+K N L E +K DFG++ + K
Sbjct: 119 TQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIK 175
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRN 327
VG+ +++APEV+K+ + ++D+WS+G IT I L G P + + + +N
Sbjct: 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLG-ITAIELARGEPPHSELHPMKVLFLIPKN 234
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
P + S K+FV+ L K+P R TA + L H ++ +
Sbjct: 235 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-44
Identities = 82/294 (27%), Positives = 139/294 (47%), Gaps = 31/294 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
K + + + + LG G +G Y A K G VA+K++
Sbjct: 24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----------------- 66
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
++++ +E+ I+Q +VVK+Y ++ + ++I ME C G + D I+ ++ TE
Sbjct: 67 DLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTE 124
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-K 269
+ A +++ L+ H +HRD+K N L + K DFG++ + K
Sbjct: 125 DEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQLTDTMAK 181
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLCGRRPFWDKTE-DGIFKEVLR 326
++G+ +++APEV++ +D+WS+G IT I + G+ P+ D IF
Sbjct: 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLG-ITAIEMAEGKPPYADIHPMRAIFMIPTN 240
Query: 327 NKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 379
P FR + W S++ DFVK+ LVK P R TA Q L HP+VR S +
Sbjct: 241 PPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 3e-44
Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 69/316 (21%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
Y + + LG G++ + A + N ++V VK ++ P+ +
Sbjct: 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK------------------PVKKKK 76
Query: 155 VKREVKILQALAGHENVVKFYNAFEDD---NYVYIAMELCEGGEL--LDRILAKKDSRYT 209
+KRE+KIL+ L G N++ + +D + + + L + L D R+
Sbjct: 77 IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV-NNTDFKQLYQTLTDYDIRF- 134
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ ++L+ CH G++HRD+KP N + L+ D+GL++F PG++
Sbjct: 135 ------YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQE 186
Query: 270 FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------------- 312
+ V S Y+ PE+L + D+WS+G + ++ + PF
Sbjct: 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246
Query: 313 ----------WDKTEDGIFKEVLRNKPDFRRKPW---------PSISNSAKDFVKKLLVK 353
DK + RK W +S A DF+ KLL
Sbjct: 247 VLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRY 306
Query: 354 DPRARLTAAQALSHPW 369
D ++RLTA +A+ HP+
Sbjct: 307 DHQSRLTAREAMEHPY 322
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 2e-43
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 40/302 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y + +++G G A ++VA+K+I +L+ +++++
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-------------NLEKCQT-SMDELL 61
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------RILAKKDSRYTE 210
+E++ + H N+V +Y +F + +++ M+L GG +LD K E
Sbjct: 62 KEIQAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------ 264
A ++R++L H +G +HRD+K N L ED S++ DFG+S F+
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDI 177
Query: 265 KPGKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYI-LLCGRRPFWDKTEDGIF 321
K + VG+ ++APEV+++ G ++D+WS G IT I L G P+ +
Sbjct: 178 TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG-ITAIELATGAAPYHKYPPMKVL 236
Query: 322 KEVLRNKP------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
L+N P ++ S + + L KDP R TAA+ L H + ++ +
Sbjct: 237 MLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296
Query: 376 AS 377
Sbjct: 297 KE 298
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 2e-43
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 45/329 (13%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
+L ++ + ++ K D DF+ K++G G F V K
Sbjct: 29 GASELAQDKYVADFLQWAEPIVVRLKEVRLQRD-DFEIL----KVIGRGAFSEVAVVKMK 83
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
G A+K + K +L R V + E +L + + + AF
Sbjct: 84 QTGQVYAMKIMNKWDMLKR------------GEVSCFREERDVL-VNGDRRWITQLHFAF 130
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRD 236
+D+NY+Y+ ME GG+LL +L+K R + A + ++ V A +H G VHRD
Sbjct: 131 QDENYLYLVMEYYVGGDLL-TLLSKFGERIPAEMARFYLAEI--VMAIDSVHRLGYVHRD 187
Query: 237 MKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS--- 289
+KP+N L D ++ DFG ++ + VG+ Y++PE+L+
Sbjct: 188 IKPDNILL-----DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 290 -----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSA 343
GPE D W++GV Y + G+ PF+ + + +++ K + A
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 344 KDFVKKLLVKDPRARLTAAQAL---SHPW 369
+DF+++LL P RL A +HP+
Sbjct: 303 RDFIQRLL-CPPETRLGRGGAGDFRTHPF 330
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 2e-43
Identities = 83/325 (25%), Positives = 137/325 (42%), Gaps = 43/325 (13%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
++ L+ ++ R I + + D++ + K++G G FG + K
Sbjct: 37 DFPALRKNKNIDNFLSRYKDTINKIRDLRMKAE-DYE----VVKVIGRGAFGEVQLVRHK 91
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
+ A+K + K +++ R E I+ A A VV+ + AF
Sbjct: 92 STRKVYAMKLLSKFEMIKR------------SDSAFFWEERDIM-AFANSPWVVQLFYAF 138
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRD 236
+DD Y+Y+ ME GG+L+ +++ EK A ++ V A +H G +HRD
Sbjct: 139 QDDRYLYMVMEYMPGGDLV-NLMSNY--DVPEKWARFYTAEV--VLALDAIHSMGFIHRD 193
Query: 237 MKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS--- 289
+KP+N L D S LK DFG + + VG+ Y++PEVLK +
Sbjct: 194 VKPDNMLL-----DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDG 248
Query: 290 --GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 347
G E D WS+GV Y +L G PF+ + G + +++ +K IS AK+ +
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLI 308
Query: 348 KKLLVKDPRARLTAAQAL---SHPW 369
L D RL H +
Sbjct: 309 CAFL-TDREVRLGRNGVEEIKRHLF 332
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 4e-43
Identities = 90/372 (24%), Positives = 147/372 (39%), Gaps = 69/372 (18%)
Query: 39 HHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98
T+ + ++ + +K + K S+ T V G+ D + Y
Sbjct: 2 SGRPRTTSFAESCKPVQQPSAFGSMKVSR-DKDGSKVTTVVATPGQGPDR----PQEVSY 56
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T K++G+G FG Y A +G+ VA+KK+ QD + RE
Sbjct: 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----------LQDKRFKN--------RE 97
Query: 159 VKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
++I++ L H N+V+ F +D+ Y+ + ++ E + R+ + SR +
Sbjct: 98 LQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVA-RHYSRAKQTL 153
Query: 213 AAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
+ V+ Q+ R A H G+ HRD+KP+N L LK DFG + + G+
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGE 211
Query: 269 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 322
+ S YY APE++ DVWS G + LL +P + D D + +
Sbjct: 212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEII 270
Query: 323 EVL-----------------RNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLT 360
+VL P + PW P A +LL P ARLT
Sbjct: 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
Query: 361 AAQALSHPWVRE 372
+A +H + E
Sbjct: 331 PLEACAHSFFDE 342
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-42
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 42/292 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
F+ IGK G FG + A+K + K K + R V
Sbjct: 16 HFEILRAIGK----GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERN------------EV 59
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
+V +E++I+Q L H +V + +F+D+ +++ ++L GG+L R +++ + E+
Sbjct: 60 RNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDL--RYHLQQNVHFKEET 116
Query: 213 AAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGK 268
+ + ++ V A +L ++HRDMKP+N L D + TDF ++ +
Sbjct: 117 VKLFICEL--VMALDYLQNQRIIHRDMKPDNILL-----DEHGHVHITDFNIAAMLPRET 169
Query: 269 KFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTEDG---IF 321
+ + G+ Y+APE+ + G D WS+GV Y LL GRRP+ ++ I
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 372
+ + S +KKLL +P R + + + P++ +
Sbjct: 230 HTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 2e-42
Identities = 83/339 (24%), Positives = 142/339 (41%), Gaps = 56/339 (16%)
Query: 43 NDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGK 102
N K + + + + K +K + Q FD K
Sbjct: 2 NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQL----------DQFD----RIK 47
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
LG G FG + K +G+ A+K ++K K++ LK +E E +IL
Sbjct: 48 TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-------KLK-----QIEHTLNEKRIL 95
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 222
QA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A Q+
Sbjct: 96 QAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQI-- 150
Query: 223 VAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV----GS 276
V +LH L++RD+KPEN L ++ TDFG + K+ + G+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQ---QGYIQVTDFGFA------KRVKGRTWTLCGT 201
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+APE++ K D W++GV+ Y + G PF+ I+++++ K F P
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---P 258
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 369
S+ KD ++ LL D R + +H W
Sbjct: 259 -SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 3e-42
Identities = 78/315 (24%), Positives = 126/315 (40%), Gaps = 51/315 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y +G G +G + ++ G VA+KK +++ D +I IA+
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE---------DDPVIKKIAL---- 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+++L+ L H N+V F +++ E C+ + L + E +
Sbjct: 51 REIRMLKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDHT--VLHELDRYQRGVPEHLVKSI 107
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
Q L+ CH H +HRD+KPEN L S +K DFG + P + D V
Sbjct: 108 TWQTLQAVNFCHKHNCIHRDVKPENILITK---HSVIKLCDFGFARLLTGPSDYYDDEVA 164
Query: 276 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 322
+ +Y +PE+L + GP DVW+IG + + L P W D ++
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAIGCV-FAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223
Query: 323 ----EVLRNKPDFR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+V F +P+IS A +K L DP RLT Q L
Sbjct: 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
Query: 366 SHPWVREGGDASEIP 380
HP+ + ++
Sbjct: 284 HHPYFENIREIEDLA 298
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 4e-42
Identities = 60/336 (17%), Positives = 113/336 (33%), Gaps = 67/336 (19%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-------EKNKILIRVVSFQDLK- 145
+ + + +G G FG + A +K + A+K+I + K++ V + L+
Sbjct: 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 63
Query: 146 -----------------------------------MILPIAVEDVKREVKILQALAGHEN 170
+ P ++ +++ + + +N
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS-TKN 122
Query: 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHL 229
V Y+YI M+LC L D + + E + + Q+ H
Sbjct: 123 TVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182
Query: 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------DFIKPGKKFQDIVGS 276
GL+HRD+KP N F D +K DFGL + VG+
Sbjct: 183 KGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y++PE + + + D++S+G+I + LL ++ I +V K
Sbjct: 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR--IITDVRNLKFP---LL 294
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+ V+ +L P R A + +
Sbjct: 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 4e-42
Identities = 76/337 (22%), Positives = 143/337 (42%), Gaps = 53/337 (15%)
Query: 72 NSRRQTGVI-PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE 130
+S +QTG + G+R + D + +G++ G G G + + G +AVK++
Sbjct: 5 SSGKQTGYLTIGGQRYQAEIN-DLEN---LGEM-GSGTCGQVWKMRFRKTGHVIAVKQMR 59
Query: 131 KNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMEL 190
++ + ++ K IL ++ ++ +V+ + F + V+IAMEL
Sbjct: 60 RS------GNKEENKRIL--------MDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105
Query: 191 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSA 247
+++ + E+ + +++ A +L G++HRD+KP N L
Sbjct: 106 MGTC--AEKLKKRMQGPIPERILGKMTVAIVK--ALYYLKEKHGVIHRDVKPSNILLDER 161
Query: 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGVI 301
+ +K DFG+S + K G A Y+APE + + +DVWS+G I
Sbjct: 162 GQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG-I 217
Query: 302 TYI-LLCGRRPFWDKTEDGIFK---EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 357
+ + L G+ P+ K F+ +VL+ +P S + FVK L KD R
Sbjct: 218 SLVELATGQFPY--KNCKTDFEVLTKVLQEEPP-LLPGHMGFSGDFQSFVKDCLTKDHRK 274
Query: 358 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 394
R + L H +++ + +D + + K
Sbjct: 275 RPKYNKLLEHSFIKR---YETLEVD------VASWFK 302
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 5e-42
Identities = 72/295 (24%), Positives = 122/295 (41%), Gaps = 38/295 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G +G K +G +AVK+I V ++ K +L ++ ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRST------VDEKEQKQLL--------MDLDVVM 75
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQML 221
+ +V+FY A + +I MEL + + + D E+ + +
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV 135
Query: 222 RVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 277
+ A HL ++HRD+KP N L + +K DFG+S + K +D G
Sbjct: 136 K--ALNHLKENLKIIHRDIKPSNILLDRSGN---IKLCDFGISGQLVDSIAKTRD-AGCR 189
Query: 278 YYVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNKP 329
Y+APE + + + SDVWS+G IT L GR P+ W+ D + + V + P
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLG-ITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
S S +FV L KD R + L HP++ E ++++
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM---YEERAVEVA 300
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 1e-41
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 49/330 (14%)
Query: 59 NYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
N L+ +++ K+ + DF+ I K++G G FG V K
Sbjct: 42 NNSPLRREKNILEYLEWAKPFTSKVKQMRLHRE-DFE----ILKVIGRGAFGEVAVVKLK 96
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
A+K + K ++L R + E +L + + + AF
Sbjct: 97 NADKVFAMKILNKWEMLKRA------------ETACFREERDVLVN-GDSKWITTLHYAF 143
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRD 236
+DDN +Y+ M+ GG+LL L+K + R E+ A + +M V A +H VHRD
Sbjct: 144 QDDNNLYLVMDYYVGGDLLTL-LSKFEDRLPEEMARFYLAEM--VIAIDSVHQLHYVHRD 200
Query: 237 MKPENFLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKS 289
+KP+N L D + ++ DFG + + VG+ Y++PE+L+
Sbjct: 201 IKPDNILM-----DMNGHIRLADFGSC---LKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 290 ------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNS 342
GPE D WS+GV Y +L G PF+ ++ + +++ +K F+ + +S +
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSEN 312
Query: 343 AKDFVKKLLVKDPRARLTAAQAL---SHPW 369
AKD +++L+ RL HP+
Sbjct: 313 AKDLIRRLICSREH-RLGQNGIEDFKKHPF 341
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 2e-41
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 50/294 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
DF I + LG G FG ++ + NG A+K ++K ++ LK V
Sbjct: 7 DFQ----ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-------RLKQ-----V 50
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E E +L + H +++ + F+D +++ M+ EGGEL + +K R+
Sbjct: 51 EHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPV 107
Query: 213 AAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLSDFIKPGK 268
A ++ A +LH +++RD+KPEN L D + +K TDFG + K
Sbjct: 108 AKFYAAEV--CLALEYLHSKDIIYRDLKPENILL-----DKNGHIKITDFGFA------K 154
Query: 269 KFQDIV----GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
D+ G+ Y+APEV+ K D WS G++ Y +L G PF+D +++
Sbjct: 155 YVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK 214
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
+L + F P P + KD + +L+ +D RL +HPW +E
Sbjct: 215 ILNAELRF---P-PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-41
Identities = 77/306 (25%), Positives = 119/306 (38%), Gaps = 50/306 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
LG G +G +G +AVK+I V+ Q+ K +L ++ I
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT------VNSQEQKRLL--------MDLDISM 60
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA---KKDSRYTEKDAAVVVRQM 220
V FY A + V+I MEL + LD+ K E + +
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 221 LRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 276
++ A HLH ++HRD+KP N L + + +K DFG+S + K D G
Sbjct: 119 VK--ALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDID-AGC 172
Query: 277 AYYVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNK 328
Y+APE + + + SD+WS+G IT I L R P+ W + + V
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLG-ITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN 388
P + S DF + L K+ + R T + + HP+ D
Sbjct: 232 PQLPADKF---SAEFVDFTSQCLKKNSKERPTYPELMQHPFFT---LHESKGTD------ 279
Query: 389 MRQFVK 394
+ FVK
Sbjct: 280 VASFVK 285
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 3e-41
Identities = 83/344 (24%), Positives = 134/344 (38%), Gaps = 55/344 (15%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK 131
+ +GV + F + +Y L+G G +G +K G VA+KK +
Sbjct: 5 HHHHSSGVDLGTENLYFQSME----KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLE 60
Query: 132 NKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 191
+ D KM+ IA+ RE+K+L+ L HEN+V + Y+ E
Sbjct: 61 S---------DDDKMVKKIAM----REIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFV 106
Query: 192 EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251
+ + L + + + Q++ CH H ++HRD+KPEN L
Sbjct: 107 DHT--ILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ---SG 161
Query: 252 SLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 308
+K DFG + PG+ + D V + +Y APE+L K G DVW+IG + +
Sbjct: 162 VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCL-VTEMFM 220
Query: 309 RRPFW--DKTEDGIFK-------------EVLRNKPDFR-------------RKPWPSIS 340
P + D D ++ E+ P F + +P +S
Sbjct: 221 GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS 280
Query: 341 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 384
D KK L DP R A+ L H + + G A ++
Sbjct: 281 EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQELQ 324
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 4e-40
Identities = 69/306 (22%), Positives = 135/306 (44%), Gaps = 50/306 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
+Y + +G G +G + A ++ + VA+K++ R+ + +P A+
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEG---VPSSAL--- 49
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
RE+ +L+ L H+N+V+ ++ D + + E C+ L + + +
Sbjct: 50 -REICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKS 105
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ Q+L+ CH ++HRD+KP+N L + LK +FGL+ F P + + V
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSAEV 162
Query: 275 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL--- 325
+ +Y P+VL + D+WS G I L RP + + +D + + +L
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
Query: 326 --------RNKPDFRRKP-----------WPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
PD++ P P ++ + +D ++ LL +P R++A +AL
Sbjct: 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
Query: 367 HPWVRE 372
HP+ +
Sbjct: 283 HPYFSD 288
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 8e-40
Identities = 84/350 (24%), Positives = 136/350 (38%), Gaps = 66/350 (18%)
Query: 64 KTKQHQKTNSRRQTGVIPCGKR-----TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDK 118
T + N + + K +D + + YT K++G+G FG + A
Sbjct: 3 FTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLV 62
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
+ VA+KK+ QD + RE++I++ + H NVV F
Sbjct: 63 ESD-EVAIKKV-----------LQDKRFKN--------RELQIMRIV-KHPNVVDLKAFF 101
Query: 179 ------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQMLRVAAECHL 229
+D+ ++ + +E E + R ++ + Q+LR A H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 287
G+ HRD+KP+N L LK DFG + + G+ + S YY APE++
Sbjct: 160 IGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGAT 217
Query: 288 KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK-------EVLRNK-------- 328
D+WS G + L+ G+ F ++ I K E ++
Sbjct: 218 NYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277
Query: 329 -PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
P R P+ P A D + +LL P ARLTA +AL HP+ E
Sbjct: 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 3e-39
Identities = 86/325 (26%), Positives = 134/325 (41%), Gaps = 65/325 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIA 151
+ Y +G G +G A DK +G++VA+KK+ + FQ K
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR--------PFQSEIFAKRAY--- 71
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKD 205
RE+ +L+ + HENV+ + F + Y+ M + L +I+
Sbjct: 72 -----RELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMG--- 120
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+++E+ +V QML+ H G+VHRD+KP N ED LK DFGL+
Sbjct: 121 LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA---VNEDCELKILDFGLARHAD 177
Query: 266 PGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------WDK 315
V + +Y APEV+ D+WS+G I +L G+ F +
Sbjct: 178 AEMT--GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 235
Query: 316 --------TEDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPR 356
+ + K +++ P RK + P S A D ++K+L D
Sbjct: 236 ILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVD 295
Query: 357 ARLTAAQALSHPWVREGGDASEIPI 381
RLTAAQAL+HP+ D E
Sbjct: 296 KRLTAAQALTHPFFEPFRDPEEETE 320
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 4e-39
Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 22/276 (7%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ RY I LG G Y+A D +VA+K I + + ++
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIK-------AIFIPPREK-----EETLK 56
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+REV L+ H+N+V + E+D+ Y+ ME EG L + I + + A
Sbjct: 57 RFEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTA 113
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD- 272
Q+L H +VHRD+KP+N L + +LK DFG++ + Q
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTN 170
Query: 273 -IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKP 329
++G+ Y +PE + +D++SIG++ Y +L G PF +T I K + + P
Sbjct: 171 HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP 230
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+ I S + + + KD R Q +
Sbjct: 231 NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 6e-39
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 26/275 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K+LG G FG ++A K A+K ++K+ +L+ D VE E ++
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD----DD--------VECTMVEKRV 70
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H + + F+ ++ ME GG+L+ I + ++ A +++
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEII 128
Query: 222 RVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 279
+ + H G+V+RD+K +N L D +K DFG+ + + K G+ Y
Sbjct: 129 -LGLQFLHSKGIVYRDLKLDNILLDK---DGHIKIADFGMCKENMLGDAKTNTFCGTPDY 184
Query: 280 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
+APE+L + D WS GV+ Y +L G+ PF + E+ +F + + P + R
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR----W 240
Query: 339 ISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 372
+ AKD + KL V++P RL + HP RE
Sbjct: 241 LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 8e-39
Identities = 90/338 (26%), Positives = 134/338 (39%), Gaps = 78/338 (23%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
RY K LG G G + A D RVA+KKI D +
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI----------VLTD--------PQS 51
Query: 155 VK---REVKILQALAGHENVVKFYNAF--------------EDDNYVYIAMELCEGGELL 197
VK RE+KI++ L H+N+VK + + N VYI E E L
Sbjct: 52 VKHALREIKIIRRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--L 108
Query: 198 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKA 255
+L + E+ A + + Q+LR ++H ++HRD+KP N + ED LK
Sbjct: 109 ANVLEQGP--LLEEHARLFMYQLLR--GLKYIHSANVLHRDLKPANLFINT--EDLVLKI 162
Query: 256 TDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR 309
DFGL+ + P + + + +Y +P +L D+W+ G I +L G+
Sbjct: 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
Query: 310 RPF--------WDK--------TEDGI------FKEVLRNKPDFRRKPW----PSISNSA 343
F E+ +RN KP P IS A
Sbjct: 223 TLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREA 282
Query: 344 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
DF++++L P RLTA +ALSHP++ + PI
Sbjct: 283 VDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPI 320
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 1e-38
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 47/306 (15%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVED 154
+RY LG GQF Y A DK VA+KKI ++ + K + A+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI-------KLGHRSEAKDGINRTAL-- 60
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
RE+K+LQ L+ H N++ +AF + + + + E L+ I+ T
Sbjct: 61 --REIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIK 115
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI 273
+ L+ H H ++HRD+KP N L E+ LK DFGL+ F P + +
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQ 172
Query: 274 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD-KTE----DGIFKEV-- 324
V + +Y APE+L R G D+W++G I LL R PF ++ IF+ +
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGT 231
Query: 325 --------LRNKPDFRR-KPW---------PSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ + PD+ K + + + D ++ L + +P AR+TA QAL
Sbjct: 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
Query: 367 HPWVRE 372
+
Sbjct: 292 MKYFSN 297
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 3e-38
Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 54/310 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
RY LG G +G Y A D + VA+K+I R+ ++ +P A+
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI-------RLEHEEEG---VPGTAI--- 81
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDA 213
REV +L+ L H N+++ + ++ +++ E E + +D+ + +
Sbjct: 82 -REVSLLKELQ-HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKN-----PDVSMRVI 134
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKKF 270
+ Q++ CH +HRD+KP+N L A E LK DFGL+ F P ++F
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF 194
Query: 271 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK-- 322
+ + +Y PE+L R D+WSI I +L F +E IF+
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL 254
Query: 323 ---------------EVLRNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAA 362
+ ++ P FR K + + D + +L DP R++A
Sbjct: 255 GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK 314
Query: 363 QALSHPWVRE 372
AL HP+
Sbjct: 315 NALEHPYFSH 324
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 3e-38
Identities = 88/359 (24%), Positives = 140/359 (38%), Gaps = 77/359 (21%)
Query: 66 KQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVA 125
H + ++ + F D RYT +G G +G A D N RVA
Sbjct: 4 HHHMAAAAAAGPEMV---RGQVF----DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVA 56
Query: 126 VKKIEKNKILIRVVSFQDL---KMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 178
+KKI F+ + L RE+KIL HEN++ +
Sbjct: 57 IKKISP---------FEHQTYCQRTL--------REIKILLRFR-HENIIGINDIIRAPT 98
Query: 179 -EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHR 235
E VYI +L E L ++L K + + Q+LR ++H ++HR
Sbjct: 99 IEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQILR--GLKYIHSANVLHR 152
Query: 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL--KRKS 289
D+KP N L LK DFGL+ P V + +Y APE++ +
Sbjct: 153 DLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 290 GPESDVWSIGVITYILLCGRRPF--------WDK--------TEDGIF-------KEVLR 326
D+WS+G I +L R F + +++ + + L
Sbjct: 210 TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL 269
Query: 327 NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ P + PW P+ + A D + K+L +P R+ QAL+HP++ + D S+ PI
Sbjct: 270 SLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 3e-38
Identities = 62/331 (18%), Positives = 118/331 (35%), Gaps = 60/331 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS-FQ---DLKMIL 148
YT+ + + G +G D G VA+K++ R V+ K +L
Sbjct: 19 AMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAK 203
RE+++L H N++ + F + +Y+ EL L +++
Sbjct: 78 --------REIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHD 126
Query: 204 KDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
+ + + + +L LH G+VHRD+ P N L +++ + DF L+
Sbjct: 127 QRIVISPQHIQYFMYHILL--GLHVLHEAGVVHRDLHPGNIL---LADNNDITICDFNLA 181
Query: 262 DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------ 313
V +Y APE++ + D+WS G + + R+ +
Sbjct: 182 REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTFY 240
Query: 314 --------------DKTEDGIFKEVLRN-----KPDFRRKPW----PSISNSAKDFVKKL 350
+ R+ + + W P+ A D + K+
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKM 300
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEIPI 381
L +P+ R++ QAL HP+ D ++
Sbjct: 301 LEFNPQRRISTEQALRHPYFESLFDPLDLTE 331
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 6e-38
Identities = 66/336 (19%), Positives = 120/336 (35%), Gaps = 78/336 (23%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ IGK G +A K G+ V V++I +L+
Sbjct: 25 GCYELLTVIGK--GFEDLMTVNLARYKPTGEYVTVRRI-------------NLEACSNEM 69
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V ++ E+ + + H N+V + F DN +++ G D I E
Sbjct: 70 VTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNEL 128
Query: 212 DAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGK 268
A +++ +L+ A ++H G VHR +K + L D + + + I G+
Sbjct: 129 AIAYILQGVLK--ALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMISHGQ 183
Query: 269 K-------FQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYI-LLCGRRPFWD--- 314
+ + V +++PEVL++ +SD++S+G IT L G PF D
Sbjct: 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG-ITACELANGHVPFKDMPA 242
Query: 315 ---------------------------------KTEDGIFKEVLRNKPDFRRKPWPSI-- 339
G+ + + P PS
Sbjct: 243 TQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPY 302
Query: 340 ----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
S FV++ L ++P AR +A+ L+H + +
Sbjct: 303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 7e-38
Identities = 81/334 (24%), Positives = 137/334 (41%), Gaps = 73/334 (21%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIA 151
+RY K +G G G A D VA+KK+ + FQ+ K
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR--------PFQNQTHAKRAY--- 109
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKD 205
RE+ +++ + H+N++ N F E+ VY+ MEL + L +++ +
Sbjct: 110 -----RELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQME- 160
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ + ++ QML H G++HRD+KP N + K D +LK DFGL+
Sbjct: 161 --LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFGLARTAG 215
Query: 266 PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDK- 315
V + YY APEV L D+WS+G I ++ + F W+K
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV 275
Query: 316 -------TEDGIFK------EVLRNKPDFRRKPWPSI----------------SNSAKDF 346
+ + K + N+P + +P + ++ A+D
Sbjct: 276 IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
+ K+LV DP R++ AL HP++ D +E+
Sbjct: 336 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE 369
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 7e-38
Identities = 87/355 (24%), Positives = 139/355 (39%), Gaps = 68/355 (19%)
Query: 65 TKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
H + R T +T + + RY +G G +G A D G RV
Sbjct: 2 AHHHHHHSQERPTFYRQELNKTIW----EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRV 57
Query: 125 AVKKIEKNKILIRVVSFQDL---KMILPIAVEDVKREVKILQALAGHENVVKFYNAF--- 178
AVKK+ + FQ + K RE+++L+ + HENV+ + F
Sbjct: 58 AVKKLSR--------PFQSIIHAKRTY--------RELRLLKHMK-HENVIGLLDVFTPA 100
Query: 179 ---EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235
E+ N VY+ L L+ I+ K + T+ ++ Q+LR H ++HR
Sbjct: 101 RSLEEFNDVYLVTHLMGAD--LNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHR 156
Query: 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPES 293
D+KP N ED LK DFGL+ + V + +Y APE++
Sbjct: 157 DLKPSNLA---VNEDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTV 211
Query: 294 DVWSIGVITYILLCGR-----------------------RPFWDKTEDGIFKEVLRNKPD 330
D+WS+G I LL GR K + +++
Sbjct: 212 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 271
Query: 331 FRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ + + A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 272 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 1e-37
Identities = 92/350 (26%), Positives = 138/350 (39%), Gaps = 82/350 (23%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ 142
KR + + + + LLG G +G AT K G+ VA+KKIE F
Sbjct: 2 PKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---------PFD 48
Query: 143 DL---KMILPIAVEDVKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGG 194
L RE+KIL+ HEN++ +N E+ N VYI EL +
Sbjct: 49 KPLFALRTL--------REIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD 99
Query: 195 ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS 252
L R+++ + ++ + Q LR A LH ++HRD+KP N L +
Sbjct: 100 --LHRVISTQM--LSDDHIQYFIYQTLR--AVKVLHGSNVIHRDLKPSNLL---INSNCD 150
Query: 253 LKATDFGLSDFIKPGKKFQDIVGSA-----------YYVAPEVL--KRKSGPESDVWSIG 299
LK DFGL+ I +Y APEV+ K DVWS G
Sbjct: 151 LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCG 210
Query: 300 VITYILLCGR--------------------RPFWDKTEDGIF----KEVLRNKPDFRRKP 335
I L R P D I +E +++ P + P
Sbjct: 211 CILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAP 270
Query: 336 W----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
P ++ D ++++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 271 LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPE 320
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 147 bits (371), Expect = 1e-37
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 37/347 (10%)
Query: 35 RRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDF 94
N + + ++ Q+ + TK ++ + + G R DF
Sbjct: 285 EYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLT-DF 343
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
+ +LG G FG ++ K + AVK ++K+ ++ VE
Sbjct: 344 N----FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDD------------DVEC 387
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
E ++L + + ++ F+ + +Y ME GG+L+ I ++ R+ E A
Sbjct: 388 TMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAV 445
Query: 215 VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
++ L G+++RD+K +N + S + +K DFG+ + I G +
Sbjct: 446 FYAAEI--AIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTK 500
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
G+ Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ +
Sbjct: 501 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 560
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 372
+ + S+S A K L+ K P RL H + R
Sbjct: 561 YPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-37
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG +A K GD AVK ++K+ IL D VE E +I
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD----DD--------VECTMTEKRI 76
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H + + + F+ + ++ ME GG+L+ I +K R+ E A +++
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEII 134
Query: 222 RVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 279
A H G+++RD+K +N L + K DFG+ + I G G+ Y
Sbjct: 135 -SALMFLHDKGIIYRDLKLDNVLLDH---EGHCKLADFGMCKEGICNGVTTATFCGTPDY 190
Query: 280 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338
+APE+L+ GP D W++GV+ Y +LCG PF + ED +F+ +L ++ +
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----W 246
Query: 339 ISNSAKDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 372
+ A +K + K+P RL A+ HP+ +E
Sbjct: 247 LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 1e-37
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 42/341 (12%)
Query: 42 RNDTTHKHQ---HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY 98
R + T Q +++A ++ + + V + + +F+
Sbjct: 96 REEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMN-EFE--- 151
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
KLLG G FG + +KA G A+K ++K I+ + V E
Sbjct: 152 -YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKD------------EVAHTLTE 198
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++LQ + H + +F+ + + ME GGEL + ++ ++E A
Sbjct: 199 NRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGA 255
Query: 219 QMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
++ V+A +LH +V+RD+K EN + D +K TDFGL + IK G +
Sbjct: 256 EI--VSALDYLHSEKNVVYRDLKLENLMLDK---DGHIKITDFGLCKEGIKDGATMKTFC 310
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 370
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 369
++ AK + LL KDP+ RL + H +
Sbjct: 371 ----TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 2e-37
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 32/280 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+LG G FG ++ K + AVK ++K+ ++ D VE E ++
Sbjct: 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----DD--------VECTMVEKRV 73
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L + + ++ F+ + +Y ME GG+L+ I ++ R+ E A ++
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEI- 130
Query: 222 RVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
L G+++RD+K +N + S + +K DFG+ + I G + G+
Sbjct: 131 -AIGLFFLQSKGIIYRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKTFCGTPD 186
Query: 279 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337
Y+APE++ + G D W+ GV+ Y +L G+ PF + ED +F+ ++ + + +
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---- 242
Query: 338 SISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 372
S+S A K L+ K P RL H + R
Sbjct: 243 SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 2e-37
Identities = 73/306 (23%), Positives = 125/306 (40%), Gaps = 51/306 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
Y LG G + Y K + VA+K+I R+ + + P A+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI-------RL----EHEEGAPCTAI--- 48
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
REV +L+ L H N+V ++ + + + E + L + L + + +
Sbjct: 49 -REVSLLKDLK-HANIVTLHDIIHTEKSLTLVFEYLDKD--LKQYLDDCGNIINMHNVKL 104
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ Q+LR A CH ++HRD+KP+N L E LK DFGL+ P K + + V
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAKSIPTKTYDNEV 161
Query: 275 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV---- 324
+ +Y P++L + D+W +G I Y + GR F T IF+ +
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221
Query: 325 ------LRNKPDFR------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ + +F+ P + + D + KLL + R R++A A+
Sbjct: 222 EETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281
Query: 367 HPWVRE 372
HP+
Sbjct: 282 HPFFLS 287
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-37
Identities = 82/305 (26%), Positives = 131/305 (42%), Gaps = 50/305 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
+Y + +G G +G Y A + G+ A+KKI R+ + +P +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKI-------RLEKEDEG---IPSTTI--- 48
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
RE+ IL+ L H N+VK Y+ + + E + L ++L + A
Sbjct: 49 -REISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKS 104
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ Q+L A CH ++HRD+KP+N L E LK DFGL+ F P +K+ +
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEI 161
Query: 275 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK------ 322
+ +Y AP+VL +K D+WS+G I ++ G F +E IF+
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221
Query: 323 -----------EVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ N + PW + S D + K+L DP R+TA QAL H
Sbjct: 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281
Query: 368 PWVRE 372
+ +E
Sbjct: 282 AYFKE 286
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 3e-37
Identities = 79/327 (24%), Positives = 133/327 (40%), Gaps = 68/327 (20%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIA 151
Y + +G G +G A D G +VA+KK+ + FQ K
Sbjct: 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR--------PFQSELFAKRAY--- 72
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKD 205
RE+++L+ + HENV+ + F +D Y+ M L +++ K
Sbjct: 73 -----RELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD--LGKLM--KH 122
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+ E +V QML+ ++H G++HRD+KP N ED LK DFGL+
Sbjct: 123 EKLGEDRIQFLVYQMLK--GLRYIHAAGIIHRDLKPGNLA---VNEDCELKILDFGLARQ 177
Query: 264 IKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR------------ 309
V + +Y APEV+ + D+WS+G I ++ G+
Sbjct: 178 ADSEMT--GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL 235
Query: 310 -----------RPFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
F + + K ++ P+ +K + + S A + ++K+LV D
Sbjct: 236 KEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLD 295
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
R+TA +AL+HP+ D + P
Sbjct: 296 AEQRVTAGEALAHPYFESLHDTEDEPQ 322
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 5e-37
Identities = 83/277 (29%), Positives = 133/277 (48%), Gaps = 33/277 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
KLLG G FG + +KA G A+K + K I+ + D V E ++
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAK-----D-------EVAHTVTESRV 58
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ H + AF+ + + ME GGEL + ++ +TE+ A ++
Sbjct: 59 LQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEI- 114
Query: 222 RVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 278
V+A +LH +V+RD+K EN + D +K TDFGL + I G + G+
Sbjct: 115 -VSALEYLHSRDVVYRDIKLENLMLDK---DGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 279 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 337
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---- 226
Query: 338 SISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPW 369
++S AK + LL KDP+ RL + + H +
Sbjct: 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 7e-37
Identities = 88/433 (20%), Positives = 144/433 (33%), Gaps = 119/433 (27%)
Query: 45 TTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLL 104
++H+ Q + + Q + ++ P D RY I L+
Sbjct: 2 SSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLI 61
Query: 105 GHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIAVEDVKREVKI 161
G G +G+ A DK VA+KKI + F+DL K IL RE+ I
Sbjct: 62 GTGSYGHVCEAYDKLEKRVVAIKKILR--------VFEDLIDCKRIL--------REIAI 105
Query: 162 LQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
L L H++VVK + E + +Y+ +E+ + ++ + TE +
Sbjct: 106 LNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLF-RTPVYLTELHIKTL 161
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+ +L H G++HRD+KP N L +D S+K DFGL+ + + +
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
Query: 277 A----------------------------YYVAPEVL--KRKSGPESDVWSIGVI----- 301
+ +Y APE++ + DVWSIG I
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Query: 302 -----TYILLCGRRPF-------------------------------------------- 312
R P
Sbjct: 279 NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEED 338
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+ E K +R P P+ S A +K++LV +P R+T + L+HP
Sbjct: 339 IEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHP 398
Query: 369 WVREGGDASEIPI 381
+ +E A
Sbjct: 399 FFKEVRIAEVETN 411
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 7e-37
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 39/285 (13%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
++LG G +G + T G A+K ++K I+ ++ K K E
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV------RNAKD-----TAHTKAE 71
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
IL+ H +V AF+ +Y+ +E GGEL ++ +++ + E A +
Sbjct: 72 RNILEE-VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLA 128
Query: 219 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKFQDI 273
++ A HLH G+++RD+KPEN + + +K TDFGL + I G
Sbjct: 129 EI--SMALGHLHQKGIIYRDLKPENIML-----NHQGHVKLTDFGLCKESIHDGTVTHTF 181
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
G+ Y+APE+L R D WS+G + Y +L G PF + ++L+ K +
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL- 240
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----LSHPWVRE 372
P P ++ A+D +KKLL ++ +RL A +HP+ R
Sbjct: 241 --P-PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 8e-37
Identities = 82/335 (24%), Positives = 134/335 (40%), Gaps = 73/335 (21%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIA 151
+RY K +G G G A D VA+KK+ + FQ+ K
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR--------PFQNQTHAKRAY--- 72
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKD 205
RE+ +++ + H+N++ N F E+ VYI MEL + L +++
Sbjct: 73 -----RELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQ--- 121
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ + ++ QML H G++HRD+KP N + K D +LK DFGL+
Sbjct: 122 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFGLARTAG 178
Query: 266 PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDK- 315
V + YY APEV L D+WS+G I ++ G F W+K
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 238
Query: 316 -------TEDGIFK------EVLRNKPDFRRKPWPSI----------------SNSAKDF 346
+ + K + N+P + + + ++ A+D
Sbjct: 239 IEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 298
Query: 347 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ K+LV D R++ +AL HP++ D SE
Sbjct: 299 LSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA 333
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 9e-37
Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 42/278 (15%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+Y + + HG G+ Y+A D+ NG V +K L+ D A
Sbjct: 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLK------GLVHS---GD-----AEAQA 124
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRY 208
E + L + H ++V+ +N E + YI ME G L +
Sbjct: 125 MAMAERQFLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK----GQKL 179
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
+A + ++L + H GLV+ D+KPEN + + LK D G
Sbjct: 180 PVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAV---SRIN 232
Query: 269 KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
F + G+ + APE+++ +D++++G L +G + + L
Sbjct: 233 SFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTR-----NGRYVDGLPED 287
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
P +S +++ + DPR R T A+ +S
Sbjct: 288 D-----PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 1e-36
Identities = 78/310 (25%), Positives = 124/310 (40%), Gaps = 51/310 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
RY +G G +G Y A D +G VA+K + RV + LPI V
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV-------RVPNGGGGGGGLPISTV--- 59
Query: 156 KREVKILQAL--AGHENVVKFY-----NAFEDDNYVYIAMELCEG--GELLDRILAKKDS 206
REV +L+ L H NVV+ + + + V + E + LD+
Sbjct: 60 -REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA---PPP 115
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+ ++RQ LR H + +VHRD+KPEN L S ++K DFGL+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSY 172
Query: 267 GKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIF 321
+V + +Y APEVL + D+WS+G I + + F +E IF
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 232
Query: 322 KEV----------LRNKPDFRRKPW---------PSISNSAKDFVKKLLVKDPRARLTAA 362
+ + P P P + S + ++L +P R++A
Sbjct: 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292
Query: 363 QALSHPWVRE 372
+AL H ++ +
Sbjct: 293 RALQHSYLHK 302
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-36
Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 51/306 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
+Y + +G G +G Y A D G VA+K+I R+ + + +P A+
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRI-------RLDAEDEG---IPSTAI--- 67
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
RE+ +L+ L H N+V + + + + E E L ++L + + + +
Sbjct: 68 -REISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKI 123
Query: 216 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIV 274
+ Q+LR A CH H ++HRD+KP+N L S D +LK DFGL+ F P + + V
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEV 180
Query: 275 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV---- 324
+ +Y AP+VL +K D+WSIG I ++ G+ F T+ IF +
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN 240
Query: 325 ------LRNKPDFR------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
++ P ++ P D + +L DP R++A A++
Sbjct: 241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300
Query: 367 HPWVRE 372
HP+ ++
Sbjct: 301 HPYFKD 306
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-36
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 35/278 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
K++G G FG +A KA AVK ++K IL + ++ + + E +
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK----KE--------EKHIMSERNV 91
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L H +V + +F+ + +Y ++ GGEL + +++ + E A ++
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEI- 148
Query: 222 RVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKFQDIVGS 276
+A +LH +V+RD+KPEN L DS + TDFGL + I+ G+
Sbjct: 149 -ASALGYLHSLNIVYRDLKPENILL-----DSQGHIVLTDFGLCKENIEHNSTTSTFCGT 202
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+APEVL ++ D W +G + Y +L G PF+ + ++ +L +
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK--- 259
Query: 336 WPSISNSAKDFVKKLLVKDPRARL----TAAQALSHPW 369
P+I+NSA+ ++ LL KD RL + SH +
Sbjct: 260 -PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-36
Identities = 84/386 (21%), Positives = 144/386 (37%), Gaps = 91/386 (23%)
Query: 57 AKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVAT 116
K ++L+ + Q+ +R + ++ D DF++ I +L G G G + +
Sbjct: 1 GKKLEELELDEQQR---KRLEAFLTQKQKVGELKDDDFEK---ISEL-GAGNGGVVFKVS 53
Query: 117 DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176
K +G +A K I + I+ RE+++L +V FY
Sbjct: 54 HKPSGLVMARKLIHLE------IKPAIRNQII--------RELQVLHECN-SPYIVGFYG 98
Query: 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LV 233
AF D + I ME +GG L + KK R E+ V +++ +L ++
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIK--GLTYLREKHKIM 154
Query: 234 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVLKRKS 289
HRD+KP N L S E +K DFG+S G+ + VG+ Y++PE L+
Sbjct: 155 HRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 206
Query: 290 -GPESDVWSIGVITYILLCGRRPF--------------------WDKTEDGIFKEVLRNK 328
+SD+WS+G+ + GR P + NK
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 329 PDFRRKPWPSI--------------------SNSAKDFVKKLLVKDPRARLTAAQALSHP 368
+P +I S +DFV K L+K+P R Q + H
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326
Query: 369 WVREGGDASEIPIDISVLNNMRQFVK 394
+++ + +D ++
Sbjct: 327 FIKR---SDAEEVD------FAGWLC 343
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-36
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 11/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +EE+ L++ F ID D +G+I+ +E++ L + + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDK 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
G +D+ EF+AAT+H+++LE + +L +AF FD D G+IT +E++ GL
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREE----NLV--SAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 524 K-GSIDPLLEEADIDKDGRISLSEFRRLLRT 553
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 4e-13
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 11/116 (9%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L+ EE +L F D D +G I+L+E++QA L + + ++++ ID + DG
Sbjct: 78 LEREE--NLVSAFSYFDKDGSGYITLDEIQQACKDF---GLDDIHIDDMIKEIDQDNDGQ 132
Query: 470 VDFSEFVA----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 521
+D+ EF A + + +LR A D + I H
Sbjct: 133 IDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR--DALGLVDNGSNQVIEGYFKHHHH 186
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 3e-36
Identities = 77/332 (23%), Positives = 128/332 (38%), Gaps = 73/332 (21%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
+ R+ + ++ G G FG + +K+ G VA+KK+ QD
Sbjct: 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-----------IQD---- 59
Query: 148 LPIAVEDVKREVKILQALA--GHENVVKFYNAF-------EDDNYVYIAMELCEGGELLD 198
RE++I+Q LA H N+V+ + F D Y+ + ME + L
Sbjct: 60 ----PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLH 113
Query: 199 RILAKKDSRYTEKDAAVV---VRQMLRVAAECHL--HGLVHRDMKPENFLFKSAKEDSSL 253
R R ++ + Q++R HL + HRD+KP N L + D +L
Sbjct: 114 RCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTL 171
Query: 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 311
K DFG + + P + + S YY APE++ + D+WS+G I ++ G
Sbjct: 172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPI 231
Query: 312 FWDKTEDG------IFKEVL-----------------RNKPDFRRKPW--------PSIS 340
F + ++ I + VL + + + PW +
Sbjct: 232 F--RGDNSAGQLHEIVR-VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDA 288
Query: 341 NSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
A D + LL P R+ +AL HP+ E
Sbjct: 289 KEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 3e-36
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
++ + LG+G + Y +K G VA+K++ ++ D + P A+
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-------KL----DSEEGTPSTAI--- 51
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE---GGELLDRILAKKDSRYTEKD 212
RE+ +++ L HEN+V+ Y+ +N + + E + + R +
Sbjct: 52 -REISLMKELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNL 109
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQ 271
Q+L+ A CH + ++HRD+KP+N L + LK DFGL+ F P F
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFS 166
Query: 272 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK--- 322
V + +Y AP+VL R D+WS G I ++ G+ F + IF
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG 226
Query: 323 ----------EVLRN-KPDFRRKP------------WPSISNSAKDFVKKLLVKDPRARL 359
L P+ +++P + + DF+ LL +P RL
Sbjct: 227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRL 286
Query: 360 TAAQALSHPWVRE 372
+A QAL HPW E
Sbjct: 287 SAKQALHHPWFAE 299
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 4e-36
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 22/274 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG +A G A KK+EK +I R E +I
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK------------GEAMALNEKQI 237
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
L VV A+E + + + + L GG+L I + + E A ++
Sbjct: 238 L-EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEIC 296
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 281
+ H +V+RD+KPEN L ++ +D GL+ + G+ + VG+ Y+A
Sbjct: 297 CGLEDLHRERIVYRDLKPENILLDD---HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 340
PEV+K + D W++G + Y ++ G+ PF + + +EV R + + S
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFS 413
Query: 341 NSAKDFVKKLLVKDPRARL-----TAAQALSHPW 369
A+ +LL KDP RL +A + HP
Sbjct: 414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 4e-36
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 31/283 (10%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
RY +G++LG G ++A D + VAVK ++R +D P
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVK-------VLRADLARD-----PSFYL 57
Query: 154 DVKREVKILQALAG--HENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSR 207
+RE Q A H +V Y+ E + YI ME +G L D + +
Sbjct: 58 RFRREA---QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGP 112
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL----SDF 263
T K A V+ + H +G++HRD+KP N + +++K DFG+ +D
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADS 169
Query: 264 IKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322
+ ++G+A Y++PE SDV+S+G + Y +L G PF + +
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
+ +R P +S V K L K+P R A +
Sbjct: 230 QHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-35
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 54/349 (15%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDK-----DFDRRYTIG 101
H H H+ + + + + T G+ + +F+ +
Sbjct: 4 HHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFE----LL 59
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K+LG G +G ++ + G A+K ++K I+ Q K E + E
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV------QKAKT-----TEHTRTE 108
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++L+ + +V + AF+ + +++ ++ GGEL + + R+TE + + V
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVG 166
Query: 219 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS--DFIKPGKKFQD 272
++ V A HLH G+++RD+K EN L DS+ + TDFGLS ++ D
Sbjct: 167 EI--VLALEHLHKLGIIYRDIKLENILL-----DSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 273 IVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVL 325
G+ Y+AP++++ D WS+GV+ Y LL G PF ++ I + +L
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 369
+++P + P +S AKD +++LL+KDP+ RL A + H +
Sbjct: 280 KSEPPY---P-QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 1e-35
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Query: 102 KLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K+LG G FG ++ + A+K ++K + +R K E
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-------------DRVRTKME 76
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
IL H +VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D +
Sbjct: 77 RDILVE-VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA 133
Query: 219 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSS--LKATDFGLS-DFIKPGKKFQDI 273
++ A HLH G+++RD+KPEN L D +K TDFGLS + I KK
Sbjct: 134 EL--ALALDHLHSLGIIYRDLKPENILL-----DEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
G+ Y+APEV+ R+ +D WS GV+ + +L G PF K +L+ K
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 369
+S A+ ++ L ++P RL + H +
Sbjct: 247 ----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 2e-35
Identities = 71/347 (20%), Positives = 147/347 (42%), Gaps = 50/347 (14%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG-----KL 103
H H H + + T ++ +G+ + + + ++
Sbjct: 5 HHHHHHD-----YDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRV 59
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G + + K A++ ++K + ++ V+ E + +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE------------DIDWVQTEKHVFE 107
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H +V ++ F+ ++ ++ +E GG+L+ + ++ + E+ A ++ +
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEIS-L 164
Query: 224 AAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 281
A H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y+A
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIA 221
Query: 282 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---------DKTEDGIFKEVLRNKPDF 331
PE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L +
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 372
R S+S A +K L KDP+ RL T + HP+ R
Sbjct: 282 PR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 131 bits (330), Expect = 2e-35
Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 20/174 (11%)
Query: 399 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEE---------MRQALAKDLPWK 449
++A++ + + + FD +D++ NG I+L+E + A K
Sbjct: 3 SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKF 504
+ V + + F +F+ AT + + ++ A F+ F
Sbjct: 63 RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122
Query: 505 DIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
D D G IT +E + +G+ S + D+D G + + E R
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 7e-10
Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 391 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 449
QF+ + +L L+ A FD D D +G+I+L+E + K
Sbjct: 87 QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG-KISGIS 145
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491
+ + D + G +D E H+ D E
Sbjct: 146 PSQEDCEATFRHCDLDNAGDLDVDEMTR--QHLGFWYTLDPE 185
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 2e-35
Identities = 67/289 (23%), Positives = 133/289 (46%), Gaps = 40/289 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
+++G G + + K A+K ++K + ++ V+ E +
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE------------DIDWVQTEKHV 62
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
+ + H +V ++ F+ ++ ++ +E GG+L+ + ++ + E+ A ++
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM--QRQRKLPEEHARFYSAEIS 120
Query: 222 RVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYY 279
+A H G+++RD+K +N L S + +K TD+G+ + ++PG G+ Y
Sbjct: 121 -LALNYLHERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNY 176
Query: 280 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW---------DKTEDGIFKEVLRNKP 329
+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L +
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 236
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQAL-SHPWVRE 372
R S+S A +K L KDP+ RL T + HP+ R
Sbjct: 237 RIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 4e-35
Identities = 72/345 (20%), Positives = 130/345 (37%), Gaps = 41/345 (11%)
Query: 44 DTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIG-- 101
+ H + Q +Q + Q I K T F K+ + +
Sbjct: 130 EHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIESDKFTRFCQWKNVELNIHLTMN 189
Query: 102 -----KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+++G G FG Y G A+K ++K +I ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ------------GETLAL 237
Query: 157 REVKILQALAGHEN--VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
E +L ++ + +V AF + + ++L GG+L + + ++E D
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR 295
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
+++ H +V+RD+KP N L E ++ +D GL+ KK V
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDF-SKKKPHASV 351
Query: 275 GSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEVLRNKP 329
G+ Y+APEVL++ +D +S+G + + LL G PF K + I + L
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 369
+ S S + ++ LL +D RL A + P+
Sbjct: 412 ELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF 452
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 6e-35
Identities = 78/358 (21%), Positives = 139/358 (38%), Gaps = 98/358 (27%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
++Y++GK LG G FG D +G R A+KK+ QD +
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV-----------LQDPRYKN------ 48
Query: 155 VKREVKILQALAGHENVVKFYNAF------------------------------------ 178
RE+ I++ L H N++K + F
Sbjct: 49 --RELDIMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIV 105
Query: 179 --EDDNYVYIAMELCEGGELLDRIL---AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 233
+ Y+ + ME + L ++L + ++ + Q+ R H G+
Sbjct: 106 NPSQNKYLNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC 163
Query: 234 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGP 291
HRD+KP+N L S +D++LK DFG + + P + + S +Y APE++ + P
Sbjct: 164 HRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTP 221
Query: 292 ESDVWSIGVITYILLCGRRPFWDKTEDG------IFKEVL-----------------RNK 328
D+WSIG + L+ G+ F E I + ++
Sbjct: 222 SIDLWSIGCVFGELILGKPLF--SGETSIDQLVRIIQ-IMGTPTKEQMIRMNPHYTEVRF 278
Query: 329 PDFRRKPW----PSISNS-AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
P + K W P + S A D ++++L +P R+ +A++HP+ ++ E +
Sbjct: 279 PTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEV 336
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 8e-35
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 37/283 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
++LG G FG + KA G A KK+ K ++ R + E KI
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRK------------GYQGAMVEKKI 238
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQ 219
L A +V AFE + + M + GG++ I + + + + E A Q
Sbjct: 239 L-AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 220 MLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 276
+ V+ HLH +++RD+KPEN L D +++ +D GL+ + K + G+
Sbjct: 298 I--VSGLEHLHQRNIIYRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDF 331
++APE+L + D +++GV Y ++ R PF + E + + VL +
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTY 412
Query: 332 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPW 369
K S ++KDF + LL KDP RL + +HP
Sbjct: 413 PDK----FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPL 451
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-34
Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 35/283 (12%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K +G G FG + + VA+K + + + + ++ +RE
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS--------EGETEMIEKFQEFQRE 73
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V I+ L H N+VK Y + + ME G+L L K V +R
Sbjct: 74 VFIMSNLN-HPNIVKLYGLMHNP--PRMVMEFVPCGDLYH-RLLDKAHPIKWS---VKLR 126
Query: 219 QMLRVA-AECHLHG----LVHRDMKPENFLFKSAKEDS--SLKATDFGLSDFIKPGKKFQ 271
ML +A ++ +VHRD++ N +S E++ K DFGLS
Sbjct: 127 LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS-- 184
Query: 272 DIVGSAYYVAPEVLKRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
++G+ ++APE + + ++D +S +I Y +L G PF + + I + +
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVK----DPRARLTAAQALSH 367
R P+I ++ ++ DP+ R + +
Sbjct: 245 EGLR----PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-34
Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 22/272 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y + +L+G G G Y A D VA+K L+ D P+ ++
Sbjct: 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALK-------LMSETLSSD-----PVFRTRMQ 82
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE + L +VV ++ E D +Y+ M L G +L + ++ A +
Sbjct: 83 REARTAGRLQ-EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAML--RRQGPLAPPRAVAI 139
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ--DIV 274
VRQ+ H G HRD+KPEN L D DFG++ K Q + V
Sbjct: 140 VRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEKLTQLGNTV 196
Query: 275 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
G+ YY+APE + +D++++ + Y L G P+ + + + P
Sbjct: 197 GTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPST 256
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365
P I + + + + K+P R L
Sbjct: 257 VR-PGIPVAFDAVIARGMAKNPEDRYVTCGDL 287
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-34
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 394 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL--------AKD 445
+Y R + L + L+ L +FD D+D +G + ++E+ A D
Sbjct: 14 RYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATD 73
Query: 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR-----SQAA 500
+ V + ++V A + E + S +
Sbjct: 74 EQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSY 133
Query: 501 FEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 552
++ D D DG + +EL+ + E+AD DK G++ +E L R
Sbjct: 134 YDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFR 189
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 7e-07
Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 15/81 (18%)
Query: 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRM---------------HTGLKGSIDPLLEEA 534
K R F+ FD+D DG + +E+ ++ ++
Sbjct: 31 HPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHK 90
Query: 535 DIDKDGRISLSEFRRLLRTAS 555
++ + ++ R +
Sbjct: 91 GVEPVNGLLREDWVEANRVFA 111
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 4e-34
Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 26/187 (13%)
Query: 390 RQFVKYSRLKQFALRALASTLDD----EELADLRDQFDAIDVDKNGSISLEEMRQALAKD 445
+ K ++ ++ A + + E + F D ++ G + +E+ +
Sbjct: 18 DKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEV 77
Query: 446 LPWKLKESRVLEILQ---------AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496
L SRV +I + G DF EF+ L + + + L
Sbjct: 78 LKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFF----ELT 133
Query: 497 SQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 549
F++ D + + EE + L +E D + G ++ EF
Sbjct: 134 --VMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
Query: 550 LLRTASI 556
+
Sbjct: 192 WASAVKL 198
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 7e-34
Identities = 81/377 (21%), Positives = 134/377 (35%), Gaps = 115/377 (30%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL---KMILPIA 151
Y I L+G G +GY Y+A DK VA+KK+ + F+DL K IL
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR--------MFEDLIDCKRIL--- 73
Query: 152 VEDVKREVKILQALAGHENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKKDS 206
RE+ IL L + +++ Y+ + +YI +E+ + L ++ K
Sbjct: 74 -----REITILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSD--LKKLF-KTPI 124
Query: 207 RYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
TE+ ++ +L E +H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 125 FLTEEHIKTILYNLLL--GENFIHESGIIHRDLKPANCL---LNQDCSVKVCDFGLARTI 179
Query: 265 KPGKKFQDIVGSA-----------------------YYVAPEVL--KRKSGPESDVWSIG 299
K + +Y APE++ + D+WS G
Sbjct: 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG 239
Query: 300 VI----------TYILLCGRRPF----------------WDKTEDG------IF------ 321
I R P + IF
Sbjct: 240 CIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP 299
Query: 322 -------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 364
+ ++ P + PSIS+ + ++ +L +P R+T QA
Sbjct: 300 TEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQA 359
Query: 365 LSHPWVREGGDASEIPI 381
L HP++++
Sbjct: 360 LDHPYLKDVRKKKLENF 376
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-33
Identities = 86/372 (23%), Positives = 139/372 (37%), Gaps = 105/372 (28%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ-- 142
R D R+Y + K LG G +G + + D+ G+ VAVKKI +FQ
Sbjct: 2 RVDR----HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD--------AFQNS 49
Query: 143 -DLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDR 199
D + RE+ IL L+GHEN+V N ++D VY+ + E L
Sbjct: 50 TDAQRTF--------REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHA 99
Query: 200 ILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATD 257
++ + + VV Q+++ +LH GL+HRDMKP N L + +K D
Sbjct: 100 VI--RANILEPVHKQYVVYQLIK--VIKYLHSGGLLHRDMKPSNIL---LNAECHVKVAD 152
Query: 258 FGLSDFIKPGKKFQDIVGSA----------------------YYVAPEVL--KRKSGPES 293
FGLS ++ + + + +Y APE+L K
Sbjct: 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI 212
Query: 294 DVWSIGVITYILLCGRRPFW------------------------DKTEDGIFKEVLRNKP 329
D+WS+G I +L +P + + + K ++ +
Sbjct: 213 DMWSLGCILGEIL-CGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLK 271
Query: 330 DFRRKPW--------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369
+ + A D + KLL +P R++A AL HP+
Sbjct: 272 EKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF 331
Query: 370 VREGGDASEIPI 381
V + +E P
Sbjct: 332 VSIFHNPNEEPN 343
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 4e-33
Identities = 64/279 (22%), Positives = 117/279 (41%), Gaps = 51/279 (18%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+G+ +G G FG Y K +GD VAVK + P ++ K E
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPT-------------PQQLQAFKNE 70
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V +L+ H N++ F I + CEG L L ++++ +
Sbjct: 71 VGVLRKTR-HVNILLFMGYSTAPQL-AIVTQWCEGSSLYH-HLHASETKFEM-------K 120
Query: 219 QMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGK 268
+++ +A + H ++HRD+K N ED+++K DFGL+
Sbjct: 121 KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSH 177
Query: 269 KFQDIVGSAYYVAPEVLKRKSGPE----SDVWSIGVITYILLCGRRPFWDKT-EDGIFKE 323
+F+ + GS ++APEV++ + SDV++ G++ Y L+ G+ P+ + D I +
Sbjct: 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVK----DPRAR 358
V R + ++ +K+L+ + R
Sbjct: 238 VGRG---SLSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 7e-33
Identities = 73/276 (26%), Positives = 116/276 (42%), Gaps = 43/276 (15%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ +++G G FG Y A GD VAVK R +D+ + E+V++E
Sbjct: 10 TLEEIIGIGGFGKVYRA--FWIGDEVAVKAA-------RHDPDEDISQTI----ENVRQE 56
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
K+ L H N++ + + + ME GG L +L+ K ++V
Sbjct: 57 AKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGK-----RIPPDILVN 109
Query: 219 QMLRVA-AECHLHG-----LVHRDMKPENFL-----FKSAKEDSSLKATDFGLSDFIKPG 267
+++A +LH ++HRD+K N L + LK TDFGL+
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 268 KKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
K G+ ++APEV++ + SDVWS GV+ + LL G PF + V
Sbjct: 170 TK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVK----DPRAR 358
NK I ++ + KL+ DP +R
Sbjct: 229 NK---LA---LPIPSTCPEPFAKLMEDCWNPDPHSR 258
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 9e-33
Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 18/190 (9%)
Query: 367 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 426
P V + PI S + + ++ L +T+ ++ + F +D
Sbjct: 2 QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61
Query: 427 VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486
D++G++ + E+ +L L +++ D + +G + F EF+A +
Sbjct: 62 RDRSGTLEINELMMGQFP-GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM---- 116
Query: 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS--IDPLLEEADIDKDGR 541
E F R G + P E+ G + LL
Sbjct: 117 ----ELA----YNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAF 168
Query: 542 ISLSEFRRLL 551
L+ + +
Sbjct: 169 CDLNCWIAIC 178
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 59.8 bits (145), Expect = 2e-10
Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 19/106 (17%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 472
+ + + F ++G++ E+ AL + L + + + R +L + D
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPAL-QQLGFYINQ-RTSLLLHRLFARGMAFCDL 171
Query: 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID-----RDGFIT 513
+ ++A Q A++ ++ F
Sbjct: 172 NCWIAICAFAAQTRS------------AYQMIFMNPYYGPMKPFNP 205
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220 | Back alignment and structure |
|---|
Score = 51.7 bits (124), Expect = 1e-07
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 14/80 (17%)
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------GSIDPLLE 532
++ + + F D DR G + EL G + ++
Sbjct: 41 LLNTIPLDQYTRI----YQWFMGVDRDRSGTLEINELM--MGQFPGGIRLSPQTALRMMR 94
Query: 533 EADIDKDGRISLSEFRRLLR 552
D D +G IS EF + +
Sbjct: 95 IFDTDFNGHISFYEFMAMYK 114
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-32
Identities = 61/284 (21%), Positives = 110/284 (38%), Gaps = 56/284 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
IG+L+G G+FG Y + +G+ VA++ I+ + ++ KRE
Sbjct: 36 EIGELIGKGRFGQVYHG--RWHGE-VAIRLIDIERDN-------------EDQLKAFKRE 79
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V + HENVV F A ++ I LC+G L ++
Sbjct: 80 VMAYRQTR-HENVVLFMGACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDV-------N 130
Query: 219 QMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIK 265
+ ++A E H G++H+D+K +N + ++ + TDFGL +
Sbjct: 131 KTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGR 186
Query: 266 PGKKFQDIVGSAYYVAPEVLKRKSGPE----------SDVWSIGVITYILLCGRRPFWDK 315
K + G ++APE++++ S SDV+++G I Y L PF +
Sbjct: 187 REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246
Query: 316 TEDGIFKEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 358
+ I ++ KP+ + D + + R
Sbjct: 247 PAEAIIWQMGTGMKPNLSQIGMGK---EISDILLFCWAFEQEER 287
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 1e-32
Identities = 35/273 (12%), Positives = 65/273 (23%), Gaps = 48/273 (17%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
+ RY + G + A D A +VA+ + +++
Sbjct: 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALT-------FVDPQGVLP-----DDVLQE 77
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
L + V + + + E GG L + D+ + A
Sbjct: 78 TLSRTLRLSRI-DKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGAI 132
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
++ + A H G+ P D +
Sbjct: 133 RAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA--------------- 174
Query: 275 GSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ P+ D+ IG Y LL R P + R+ +
Sbjct: 175 ----TMPDA------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIE 224
Query: 335 PW---PSISNSAKDFVKKLLVKDPRARLTAAQA 364
P I + + D R +
Sbjct: 225 PADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-32
Identities = 71/315 (22%), Positives = 123/315 (39%), Gaps = 63/315 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKI----EKNKILIRVVSFQDLKMILPI- 150
+Y +G G +G + A D K G VA+K++ + + P+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM--------------PLS 57
Query: 151 AVEDVKREVKILQAL--AGHENVVKFY-----NAFEDDNYVYIAMELCEG--GELLDRIL 201
+ REV +L+ L H NVV+ + + + + + + E + LD++
Sbjct: 58 TI----REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV- 112
Query: 202 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
+ + ++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+
Sbjct: 113 --PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLA 167
Query: 262 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--- 317
+V + +Y APEVL + D+WS+G I + + F ++
Sbjct: 168 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227
Query: 318 -DGIFK-------------------EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 357
I K I KD + K L +P
Sbjct: 228 LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAK 287
Query: 358 RLTAAQALSHPWVRE 372
R++A ALSHP+ ++
Sbjct: 288 RISAYSALSHPYFQD 302
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 2e-32
Identities = 70/273 (25%), Positives = 112/273 (41%), Gaps = 48/273 (17%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ +++G G FG A + VA+K+IE + E
Sbjct: 11 EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESER-----------------KAFIVE 51
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++ L + H N+VK Y A + V + ME EGG L +L + AA +
Sbjct: 52 LRQLSRVN-HPNIVKLYGACLNP--VCLVMEYAEGGSL-YNVLHGAEPLP-YYTAAHAMS 106
Query: 219 QMLRVA-AECHLH-----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
L+ + +LH L+HRD+KP N L + LK DFG + I+ +
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL--VAGGTVLKICDFGTACDIQ--THMTN 162
Query: 273 IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWD--KTEDGIFKEVLRNKP 329
GSA ++APEV + + E DV+S G+I + ++ R+PF + I V
Sbjct: 163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT- 221
Query: 330 DFRRKPWPSISNSAKDFVKKLLV----KDPRAR 358
R P + + ++ L+ KDP R
Sbjct: 222 --R----PPLIKNLPKPIESLMTRCWSKDPSQR 248
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-32
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
F IDV+ +G++S EE++ ++K E + I ++ID + +G +D +EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 478 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGSIDPLLEEAD 535
+ + D + L+ ++ D+D DG +T EE+ + + +AD
Sbjct: 61 FYGSIQGQDLSDDKI-GLK--VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKAD 117
Query: 536 IDKDGRISLSEFRRLL 551
+ DG I+L EF
Sbjct: 118 ANGDGYITLEEFLEFS 133
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 8e-11
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
DD+ L+ + +DVD +G ++ EE+ K +V E + D N D
Sbjct: 69 DLSDDKI--GLKVLYKLMDVDGDGKLTKEEVTSFFK-----KHGIEKVAEQVMKADANGD 121
Query: 468 GLVDFSEFVA 477
G + EF+
Sbjct: 122 GYITLEEFLE 131
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 87/375 (23%), Positives = 130/375 (34%), Gaps = 94/375 (25%)
Query: 71 TNSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKA 119
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 63 LNAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHK 120
Query: 120 NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE-----NVVKF 174
VA+K + K F E++IL+ L + NV+
Sbjct: 121 VHQHVALKMVRNEK------RFHRQAAE----------EIRILEHLRKQDKDNTMNVIHM 164
Query: 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234
F N++ + EL L + I K ++ +L+ H + ++H
Sbjct: 165 LENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPES 293
D+KPEN L K S +K DFG S + ++ + S +Y APEV L + G
Sbjct: 224 CDLKPENILLKQQG-RSGIKVIDFGSSCYE--HQRVYTYIQSRFYRAPEVILGARYGMPI 280
Query: 294 DVWSIGVITYILLCGR-----------------------------------------RPF 312
D+WS+G I LL G P
Sbjct: 281 DMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPR 340
Query: 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSA--------------KDFVKKLLVKDPRAR 358
+ V+ N RR S DF+K+ L DP R
Sbjct: 341 YCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVR 400
Query: 359 LTAAQALSHPWVREG 373
+T QAL HPW+R
Sbjct: 401 MTPGQALRHPWLRRR 415
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 4e-32
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 38/271 (14%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
I + +G G FG + A + +G VAVK + + V + RE
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFH-------------AERVNEFLRE 84
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
V I++ L H N+V F A + I E G L +L K +R + D +
Sbjct: 85 VAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGARE-QLDERRRLS 141
Query: 219 QMLRVA-AECHLHG----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQD 272
VA +LH +VHR++K N L + ++K DFGLS +
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 273 IVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331
G+ ++APEVL+ + S +SDV+S GVI + L ++P+ + + V
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC--- 255
Query: 332 RRKPWPSISNSAKDFVKKLLVK----DPRAR 358
+R I + V ++ +P R
Sbjct: 256 KR---LEIPRNLNPQVAAIIEGCWTNEPWKR 283
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 6e-32
Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 396 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 455
L S L +E+ ++ + F D++ +G + E++ A+ L ++L + +
Sbjct: 3 KNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREI 61
Query: 456 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
L+++ D L+ + +F + ++ + D ++ AF+ FD D G I+ +
Sbjct: 62 LDLIDEYDSEGRHLMKYDDFY--IVMGEKILKRDPLD-EIK--RAFQLFDDDHTGKISIK 116
Query: 516 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 554
LR G + + ++EE D+D DG I+ +EF + +
Sbjct: 117 NLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-31
Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 29/198 (14%)
Query: 374 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 433
G P+ S ++ + ++ LRA + + L F +D D + S+
Sbjct: 3 GLVPRGPLG-SHMDAVDATME-------KLRAQCLSRGASGIQGLARFFRQLDRDGSRSL 54
Query: 434 SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493
+E RQ L L L ++ + + D N G +D EF+ A
Sbjct: 55 DADEFRQGL-AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREA---- 109
Query: 494 HLRSQAAFEKFDIDRDGFITPEELR----------MHTGLKGS---IDPLLEEADI-DKD 539
+ AAF K D DG +T ++LR + +G + L+ D +KD
Sbjct: 110 VIA--AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKD 167
Query: 540 GRISLSEFRRLLRTASIS 557
G+++L+EF+ S S
Sbjct: 168 GQVTLAEFQDYYSGVSAS 185
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-31
Identities = 73/357 (20%), Positives = 128/357 (35%), Gaps = 86/357 (24%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ D RY + + LG G F ++A D N VA+ KI + +
Sbjct: 14 EPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAM-KIVRGD---------------KV 57
Query: 151 AVEDVKREVKILQAL----------AGHENVVKFYNAFE----DDNYVYIAMELCEGGEL 196
E + E+K+LQ + G +++K + F + +V + E+ G L
Sbjct: 58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENL 116
Query: 197 LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAK---ED 250
L I + + +Q+L ++H G++H D+KPEN L +
Sbjct: 117 LALIKKYEHRGIPLIYVKQISKQLLL--GLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174
Query: 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR 309
+K D G + + + + + + + Y +PEV L G +D+WS + + L+ G
Sbjct: 175 IQIKIADLGNACWY--DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
Query: 310 RPFWDKTEDGIFK---------EVL------------------------RNKPDFRRKPW 336
F K E+L RN + P
Sbjct: 233 FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL 292
Query: 337 PSISNSA-----------KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 382
+ DF+ +L DPR R A ++HPW+++ EI +
Sbjct: 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVP 349
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-31
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 389 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 448
M K + + L +E+ ++R+ FD D D +G+I +E++ A+ L +
Sbjct: 1 MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRA-LGF 59
Query: 449 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 508
+ K+ + +++ ID + G +DF EF+ T+ ++ E DS + + AF FD D
Sbjct: 60 EPKKEEIKKMISEIDKDGSGTIDFEEFL--TMMTAKMGERDSRE-EIL--KAFRLFDDDN 114
Query: 509 DGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTASI 556
G IT ++LR G + + ++ EAD + D I EF R+++ S+
Sbjct: 115 SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-31
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+DF EF+ + + + + L F FD + DGFI EEL TG +
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLLR 552
I+ L++++D + DGRI EF +++
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 9e-31
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+L EE+ +LR+ F D DK+G I+ ++ + + + + E ++E+ Q I+ N
Sbjct: 2 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNL 60
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKW---HLRSQAAFEKFDIDRDGFITPEELR--MHT 521
G VDF +FV +L ++ LR AF +FD + DG I+ ELR M
Sbjct: 61 GGHVDFDDFVELM--GPKLLAETADMIGVKELR--DAFREFDTNGDGEISTSELREAMRA 116
Query: 522 GLKGS-----IDPLLEEADIDKDGRISLSEFRRLLR 552
L I+ ++ + D++ DGR+ EF R++
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 1e-30
Identities = 83/337 (24%), Positives = 126/337 (37%), Gaps = 74/337 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI-AVEDV 155
+Y +G G FG + A + G +VA+KK+ + + ++ PI A+
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEG---FPITAL--- 64
Query: 156 KREVKILQALAGHENVVKFY--------NAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
RE+KILQ L HENVV +Y+ + CE L +L+ +
Sbjct: 65 -REIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD--LAGLLSNVLVK 120
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+T + V++ +L H + ++HRDMK N L LK DFGL+
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLA 177
Query: 268 KKFQDIVGSAY--------YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE 317
K Q + Y Y PE+L +R GP D+W G I + TE
Sbjct: 178 KNSQP---NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234
Query: 318 ----DGIFK-------------------EVLRNKPDFRRK-----PWPSISNSAKDFVKK 349
I + E L +RK A D + K
Sbjct: 235 QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDK 294
Query: 350 LLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 386
LLV DP R+ + AL+H + +P D+ +
Sbjct: 295 LLVLDPAQRIDSDDALNHDFFWS----DPMPSDLKGM 327
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 1e-30
Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + G
Sbjct: 61 NGTIDFPEFL--TMMARKMKDTDSEE-EIR--EAFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 524 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
K + +D ++ EADID DG+++ EF +++
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 5e-15
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D EE ++R+ F D D NG IS E+R + +L KL + V E+++ D + DG V
Sbjct: 81 DSEE--EIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 137
Query: 471 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
++ EFV + + + + F
Sbjct: 138 NYEEFVQ--MMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-30
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 15/155 (9%)
Query: 412 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVL-EILQAI----- 462
D + ++ F+ ID DK+G+I+ E M + AK+ K + ++VL + L +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 463 -DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 521
+D + F+ + + + F D + D I+ +E +
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 522 GLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 552
G+ G + D + DG +SL EF
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-11
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
L F A+D +++ +IS +E L ++ AID N DGL+
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145
Query: 471 DFSEFVAATLHVHQLEEHDSEKW 493
EFV A + + K
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 2e-05
Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 17/80 (21%)
Query: 490 SEKWHLRSQAAFEKFDIDRDGFITPEEL----RMHTGLKGSIDPLLEE------------ 533
S+ W + + F + D D+DG IT + +
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 534 -ADIDKDGRISLSEFRRLLR 552
+ I + F ++
Sbjct: 61 LTAVAGGKGIDETTFINSMK 80
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-30
Identities = 79/338 (23%), Positives = 122/338 (36%), Gaps = 78/338 (23%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D G +G G +G+ Y A K + A+K+IE I +
Sbjct: 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC------------- 66
Query: 153 EDVKREVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEG--GELLDRILAKKDSRY 208
RE+ +L+ L H NV+ F D V++ + E ++ A K ++
Sbjct: 67 ----REIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKK 121
Query: 209 TEK-DAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS-D 262
+ +V + Q+L H + ++HRD+KP N L + +K D G +
Sbjct: 122 PVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 263 FIKPGKKFQDIVGSA---YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE 317
F P K D+ +Y APE+L R D+W+IG I LL F + E
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
Query: 318 DG-------------IFK-----------------EVLRNKPDFRRKPW----------- 336
D IF E DFRR +
Sbjct: 242 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEK 301
Query: 337 --PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ A ++KLL DP R+T+ QA+ P+ E
Sbjct: 302 HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 3e-30
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+E+ ++R+ FD D D G+I ++E++ A+ L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 526
F +F+ T+ ++ E D+++ + AF+ FD D G I+ + L+ G +
Sbjct: 61 FGDFL--TVMTQKMSEKDTKE-EIL--KAFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 527 -IDPLLEEADIDKDGRISLSEFRRLLR 552
+ +++EAD D DG +S EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143 | Back alignment and structure |
|---|
Score = 55.9 bits (136), Expect = 1e-09
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D +E ++ F D D+ G IS + +++ K+L L + + E++ D + DG V
Sbjct: 76 DTKE--EILKAFKLFDDDETGKISFKNLKRVA-KELGENLTDEELQEMIDEADRDGDGEV 132
Query: 471 DFSEFVA 477
EF+
Sbjct: 133 SEQEFLR 139
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 5e-30
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D +E+ L +F +D+D +GS+S+EE LP + V ++ D + +G V
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 471 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----MHTG---- 522
DF EF+ + D E+ LR AF +D+D+DG+I+ EL M G
Sbjct: 56 DFKEFIEGVSQFSV--KGDKEQ-KLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 523 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASI 556
L+ +D + AD D DGRIS EF ++ I
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 147
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 1e-29
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 404 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 462
+A L +E+ + + FD + ++GSIS +E+ + + L + E++ +
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEV 64
Query: 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---M 519
D + G VDF EF+ + + + + L F FD + DG+I EEL+
Sbjct: 65 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 122
Query: 520 HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
TG + I+ L+++ D + DGRI EF ++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-29
Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 13/157 (8%)
Query: 405 ALASTLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 463
S L ++ L F + + +G +S +++ L + L + +S + +++ D
Sbjct: 2 GDVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIIL-EVLGIQQTKSTIRQLIDEFD 60
Query: 464 CNTDGLVDFSEFVAATLH--VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 518
+G +DF F ++ ++ LR AF +D + +G+I+ + +R
Sbjct: 61 PFGNGDIDFDSFKIIGARFLGEEVNPEQMQQ-ELR--EAFRLYDKEGNGYISTDVMREIL 117
Query: 519 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
S +D +++E D D G + EF ++
Sbjct: 118 AELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 2e-29
Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D +
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+G +DF EF+ +L +++E DSE+ L AF+ FD D +G I+ ELR + G
Sbjct: 60 NGTIDFPEFL--SLMARKMKEQDSEE-ELI--EAFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 524 KGS---IDPLLEEADIDKDGRISLSEFRRLL 551
K + +D ++ EADID DG I+ EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 4e-29
Identities = 78/397 (19%), Positives = 137/397 (34%), Gaps = 93/397 (23%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGY-----DKDFDRRYTIGKL 103
H H H + ++ +++ V G D + + RY I L
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMSSHKKERKVYNDGYDDDNYDYIVKNGEKWMDRYEIDSL 61
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+G G FG A D+ + VA+K I+ K +F + I EV++L+
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKK------AFLNQAQI----------EVRLLE 105
Query: 164 ALAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+ H+ +V F N++ + E+ L D + + +
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 219 QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
QM ++H D+KPEN L + K S++K DFG S + G++ + S
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQL--GQRIYQYIQS 221
Query: 277 AYYVAPEV-LKRKSGPESDVWSIGVITYILLCG--------------------------- 308
+Y +PEV L D+WS+G I + G
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 281
Query: 309 ------RRPFWDKTEDGIF--KEVLRNKPDFRRKPWPSISNSAK---------------- 344
R F++K DG + K+ K +++ + N
Sbjct: 282 LDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH 341
Query: 345 ---------DFVKKLLVKDPRARLTAAQALSHPWVRE 372
D + ++L DP+ R+ AL H + ++
Sbjct: 342 TVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 7e-29
Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 20/163 (12%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCN 465
+ + + F+ +DV+ NG ISL+EM + + L ++++ +
Sbjct: 10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 69
Query: 466 TDGL-----VDFSEFVAATLHV-----HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
G+ D+ ++ + + +++ + A F+ D D++G IT +
Sbjct: 70 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 129
Query: 516 ELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
E + G+ S + DID+ G++ + E R
Sbjct: 130 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 1e-11
Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 2/105 (1%)
Query: 391 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 449
+++ + +L L A FD +D D+NG+I+L+E + K
Sbjct: 83 AYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGII 141
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494
E + D + G +D E L + EK +
Sbjct: 142 QSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLY 186
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 16/78 (20%)
Query: 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM-----------HTGLKGSIDPLLEEA 534
+ D+ +W R + F D++ +G I+ +E+ T + EA
Sbjct: 7 SDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEA 66
Query: 535 DIDKDG-----RISLSEF 547
G +
Sbjct: 67 FFGGAGMKYGVETDWPAY 84
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 8e-29
Identities = 57/259 (22%), Positives = 100/259 (38%), Gaps = 44/259 (16%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
G++LG G FG T + G+ + +K++ + +E
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---------------FDEETQRTFLKE 57
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
VK+++ L H NV+KF D + E +GG L I+ DS+Y V
Sbjct: 58 VKVMRCLE-HPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWS---QRVS 112
Query: 219 QMLRVAA--EC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI----------- 264
+A+ H ++HRD+ N L +E+ ++ DFGL+ +
Sbjct: 113 FAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 265 ----KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 319
KK +VG+ Y++APE++ R + DV+S G++ ++ D
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP-- 227
Query: 320 IFKEVLRNKPDFRRKPWPS 338
+ N F + P
Sbjct: 228 RTMDFGLNVRGFLDRYCPP 246
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-28
Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 15/165 (9%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--------DLPWKLKESR 454
+ + + L ++ + +DV +G IS E+ + +
Sbjct: 1 MPEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQE 60
Query: 455 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH-LRSQAAFEKFDIDRDGFIT 513
L + + + E + + + ++S ++ D D+DG+++
Sbjct: 61 FLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVS 120
Query: 514 PEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 552
E + G D +K+G+IS EF +
Sbjct: 121 LPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-28
Identities = 47/279 (16%), Positives = 90/279 (32%), Gaps = 55/279 (19%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
L G + + G+ + VK ++ R D E
Sbjct: 13 NFLTKLNENHSGELWKG--RWQGNDIVVKVLKVRDWSTRKS-------------RDFNEE 57
Query: 159 VKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
L+ + H NV+ A + + + G L + + + +
Sbjct: 58 CPRLRIFS-HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ------ 110
Query: 217 VRQMLRVAAEC-----HLHGL----VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
Q ++ A + LH L + + + ED + + + + +
Sbjct: 111 -SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMADVKFSFQSP 166
Query: 268 KKFQDIVGSAYYVAPEVLKRKSGPE----SDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+ + + +VAPE L++K +D+WS V+ + L+ PF D + I +
Sbjct: 167 GR----MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK 222
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLL----VKDPRAR 358
V R P+I V KL+ +DP R
Sbjct: 223 VALEG---LR---PTIPPGISPHVSKLMKICMNEDPAKR 255
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 1e-28
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
+ L+ L + ++ L +F ++D +NG++S E+ ++ + L +
Sbjct: 7 TLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN-PLGD- 64
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK----------WHLRSQAAFEK 503
I+ A + V+F F+ H +E+++ K + AF
Sbjct: 65 ---RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRL 121
Query: 504 FDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 552
+D+D+D I+ +EL M G+ S D ++EAD D D IS +EF ++L
Sbjct: 122 YDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE 181
Query: 553 TASISSR 559
+ +
Sbjct: 182 KVDVEQK 188
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 4e-28
Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+ L +E++A+ ++ F D D +GSIS E+ + + L E+ V +++ ID +
Sbjct: 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVDG 60
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+ ++FSEF+ L QL+ +DSE+ L AF+ FD + DG I+ EL+ G
Sbjct: 61 NHAIEFSEFL--ALMSRQLKCNDSEQ-ELL--EAFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 524 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
K + +D +L E D G I++ +F LL
Sbjct: 116 KLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 4e-28
Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 20/161 (12%)
Query: 412 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVLEI---------- 458
L+ +FD D D NG++ E+ Q +A+ + V +
Sbjct: 3 AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62
Query: 459 -LQAIDCNTDGLVDFSEFVAATLHVHQL--EEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+ +DG + +F+ T ++ E + + D + DG I +
Sbjct: 63 LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122
Query: 516 ELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 552
E G + D + +G +SL E +R
Sbjct: 123 EFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
+ ++ D + +G I+ +E L + ++ E +D N +G
Sbjct: 96 FNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA---LGMSKAEAAEAFNQVDTNGNGE 152
Query: 470 VDFSEFVAA 478
+ E + A
Sbjct: 153 LSLDELLTA 161
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 3e-08
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 21/82 (25%)
Query: 490 SEKWHLRSQAAFEKFDIDRDGFITPEEL---------------------RMHTGLKGSID 528
+ R + F+++D D +G + + + G D
Sbjct: 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61
Query: 529 PLLEEADIDKDGRISLSEFRRL 550
L +EA + DG ++ +F R+
Sbjct: 62 YLAKEAGVGSDGSLTEEQFIRV 83
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 107 bits (271), Expect = 6e-28
Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
D+++++ ++ F+ D ++ G I+ E ++ L + +++ + E+ D +G +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQ 60
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 526
F EF+ ++ ++++ SE LR AF FD + G+I L+ ++ G +
Sbjct: 61 FPEFL--SMMGRRMKQTTSED-ILR--QAFRTFDPEGTGYIPKAALQDALLNLGDRLKPH 115
Query: 527 -IDPLLEEADIDKDGRISLSEFRRLLRT 553
L + + G+I F + T
Sbjct: 116 EFAEFLGITETE-KGQIRYDNFINTMFT 142
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142 | Back alignment and structure |
|---|
Score = 51.7 bits (125), Expect = 3e-08
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
E+ LR F D + G I ++ AL +L +LK E L + G +
Sbjct: 76 TSED--ILRQAFRTFDPEGTGYIPKAALQDAL-LNLGDRLKPHEFAEFLGITETE-KGQI 131
Query: 471 DFSEFVA 477
+ F+
Sbjct: 132 RYDNFIN 138
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 8e-27
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 402 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 461
++ + +E F + +G +L E + L + + ++
Sbjct: 8 SIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNT 65
Query: 462 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 518
D N DG VDF EF+AA + Q + KW F+ +D D +G I EL
Sbjct: 66 FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW------YFKLYDADGNGSIDKNELLDMF 119
Query: 519 ---------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ I+ + + DI+ DG ++L EF +
Sbjct: 120 MAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA 162
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-26
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 27/188 (14%)
Query: 394 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
+ + + L L +F A+D +K G +S +++Q A + L +
Sbjct: 7 HAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN-PLGD- 64
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA-----------AFE 502
I+++ + VDF FV H +E+ D+E + AF+
Sbjct: 65 ---RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121
Query: 503 KFDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLL 551
+D+DRDG I+ E+ + G++ + D ++EAD D DG +S EF + L
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181
Query: 552 RTASISSR 559
+ +
Sbjct: 182 EKMDVEQK 189
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 389 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 448
+ F + L F D+D++G IS EM Q L +
Sbjct: 87 LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146
Query: 449 KLKE----SRVLEILQAIDCNTDGLVDFSEFVAA--------TLHVHQLEEHDS 490
++ E + +Q D + DG V F EF + + + L+ H
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKHHHH 200
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 3e-26
Identities = 77/343 (22%), Positives = 116/343 (33%), Gaps = 86/343 (25%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
RY I LG G FG D KA G VAVK ++ + +
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD------RYCEAARS----- 60
Query: 153 EDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
E+++L+ L + V+ FE ++ I EL G D I
Sbjct: 61 -----EIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLP 114
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------------EDS 251
+ + Q+ + H + L H D+KPEN LF + +
Sbjct: 115 FRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP 174
Query: 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRR 310
+K DFG + + + +V + +Y APEV L DVWSIG I G
Sbjct: 175 DIKVVDFGSATYD--DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFT 232
Query: 311 PFWDKTED------------GIF-KEVLRNKP-----DFRRKPWPSISNSAK-------- 344
F T D G K +++ R W S++ +
Sbjct: 233 VF--PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP 290
Query: 345 ----------------DFVKKLLVKDPRARLTAAQALSHPWVR 371
D ++K+L DP R+T +AL HP+
Sbjct: 291 LKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-26
Identities = 60/346 (17%), Positives = 104/346 (30%), Gaps = 88/346 (25%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ + + + +G G FG + N AVK + K + I
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK------KYTRSAKI------ 80
Query: 154 DVKREVKILQALAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
E IL+ + + N+VK++ F +++ + E G L + I + +
Sbjct: 81 ----EADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFH 135
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--------------------- 248
+D + ++L+ L H D+KPEN L
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYR 195
Query: 249 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILL 306
+ + +K DFG + F I+ + Y APEV L SD+WS G + L
Sbjct: 196 TKSTGIKLIDFGCATFK--SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253
Query: 307 CG----------------------------------RRPFWDKTEDGIFKEVLRNKPDFR 332
G + ++
Sbjct: 254 TGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINS 313
Query: 333 RKPWPSI--------SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K DF+ +L DP R + A+ L H ++
Sbjct: 314 IKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-26
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
D ++ + ++ F+ ID +++G I E++ LA + + E L+ + G
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTD----EYLEGMMSEAPGP 55
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
++F+ F+ T+ +L D E +R AF FD + GFI + LR G + +
Sbjct: 56 INFTMFL--TMFGEKLNGTDPED-VIR--NAFACFDEEASGFIHEDHLRELLTTMGDRFT 110
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLLRTAS 555
+D + EA IDK G + EF R+L+ +
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 6e-26
Identities = 70/342 (20%), Positives = 114/342 (33%), Gaps = 82/342 (23%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
RY I LG G FG D +VA+K I +++ +
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG------KYREAARL----- 65
Query: 153 EDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
E+ +L+ + + V + F ++ IA EL G + +
Sbjct: 66 -----EINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQP 119
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------------EDS 251
Y + Q+ H + L H D+KPEN LF +++ +++
Sbjct: 120 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNT 179
Query: 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR- 309
S++ DFG + F + IV + +Y PEV L+ DVWSIG I + G
Sbjct: 180 SIRVADFGSATFD--HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFT 237
Query: 310 --------------------------------------RPFWDKTEDGIFKEVLRNKPDF 331
WD+ KP
Sbjct: 238 LFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK 297
Query: 332 RRKPWPSISNSA-KDFVKKLLVKDPRARLTAAQALSHPWVRE 372
S+ + D ++++L DP R+T A+AL HP+
Sbjct: 298 SYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-25
Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 15/165 (9%)
Query: 394 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
K R + S D+ E+ D ++ F ID + +G I +++R+ A +K
Sbjct: 3 KAKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN- 61
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
E L A+ G ++F+ F+ T+ +L+ D E + AF+ D D G I
Sbjct: 62 ---EELDAMIKEASGPINFTVFL--TMFGEKLKGADPED-VIM--GAFKVLDPDGKGSIK 113
Query: 514 PEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
L G + + I + D G + ++
Sbjct: 114 KSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-25
Identities = 36/195 (18%), Positives = 73/195 (37%), Gaps = 26/195 (13%)
Query: 376 ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 435
E ++ SV + + R + L S +EL L F +G ++
Sbjct: 27 LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNE 84
Query: 436 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495
E ++ ++ P + + A D + +G V F +F+ + + + W
Sbjct: 85 ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNW-- 142
Query: 496 RSQAAFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADID 537
AF +DI++DG+IT EE+ + ++ ++ D +
Sbjct: 143 ----AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKN 198
Query: 538 KDGRISLSEFRRLLR 552
KDG +++ EF +
Sbjct: 199 KDGVVTIDEFIESCQ 213
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 4e-25
Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
S + +L + F A+D D +G+IS+ E+ AL+ + ++L D N
Sbjct: 18 PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSS-AGVPFSLATTEKLLHMYDKNH 76
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
G + F EF + + + F K D DG + E+R + +G
Sbjct: 77 SGEITFDEFKDLHHFILSM------------REGFRKRDSSGDGRLDSNEVRAALLSSGY 124
Query: 524 KGS---IDPLLEEADIDKDGRISLSEFRRLL 551
+ S L+ + D + G + ++ L
Sbjct: 125 QVSEQTFQALMRKFDRQRRGSLGFDDYVELS 155
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 6e-15
Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 474
+ +R+ F D +G + E+R AL +++ E +++ D G + F +
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAAL-LSSGYQVSEQTFQALMRKFDRQRRGSLGFDD 150
Query: 475 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+V ++ V ++ F +D +R G +T
Sbjct: 151 YVELSIFVCRVRN------------VFAFYDRERTGQVT 177
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 97.6 bits (244), Expect = 7e-25
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 400 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 459
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++
Sbjct: 7 DDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLM 65
Query: 460 QAIDCNTDGLVDFSEFVAATLH 481
A D + G +D+ EF+AAT+H
Sbjct: 66 DAADIDKSGTIDYGEFIAATVH 87
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 3e-12
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524
++ G +D + A +L E E L+ F+ D D G IT +EL+ GLK
Sbjct: 1 HSSGHIDDDDKHMA----ERLSE--EEIGGLK--ELFKMIDTDNSGTITFDELK--DGLK 50
Query: 525 --GS------IDPLLEEADIDKDGRISLSEF 547
GS I L++ ADIDK G I EF
Sbjct: 51 RVGSELMESEIKDLMDAADIDKSGTIDYGEF 81
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 7e-25
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 31/237 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K L
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVK-----TKHPQLH----------- 52
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E KI + + G + + +Y + MEL G L+ + +++ K ++
Sbjct: 53 IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLL 110
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGK 268
QM+ H +HRD+KP+NFL K+ + + DFGL+ + P +
Sbjct: 111 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 170
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VITYILLCGRRPFWDKTEDGIFKE 323
+ +++ G+A Y + D+ S+G V+ Y G P W + ++
Sbjct: 171 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY-FNLGSLP-WQGLKAATKRQ 225
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 9e-25
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 380 PIDISVLN--NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID--VDKNGSISL 435
+ SVL ++ + + L L A + E+ L + F I V +G I+
Sbjct: 10 HLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINK 69
Query: 436 EEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKW 493
EE + AL K KES + + D +G++ F EF A ++ D +
Sbjct: 70 EEFQLALFKT---NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126
Query: 494 HLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS------------IDPLLEEADIDKD 539
+F+ +D+ + GFI +E++ + L S ID EEAD D
Sbjct: 127 ------SFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD 180
Query: 540 GRISLSEFRRLLR 552
G+I E+R L+
Sbjct: 181 GKIDKEEWRSLVL 193
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 2e-24
Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 19/154 (12%)
Query: 418 LRDQFDAIDVDKNGSISLEE---MRQALAKDLPWKLKESRVLE-----------ILQAID 463
+ +F D D NG I + +A+ + + R + D
Sbjct: 6 IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 464 CNTDGLVDFSEFVAATLHVHQLEEHDSEKW-HLRSQAAFEKFDIDRDGFITPEELR---M 519
+ D + EFV + + + + AA D D DG +T +
Sbjct: 66 RDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALT 125
Query: 520 HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 552
G+ D D DG++ +E
Sbjct: 126 AFGVPEDLARQAAAALDTDGDGKVGETEIVPAFA 159
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 4e-10
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
+ L D D +G++++ + +AL + + E + A+D + D
Sbjct: 90 DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA---FGVPEDLARQAAAALDTDGD 146
Query: 468 GLVDFSEFVAA 478
G V +E V A
Sbjct: 147 GKVGETEIVPA 157
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-24
Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 402 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 461
A + + L +++ ++++ F IDVD++G +S E+++ + L + + +L+
Sbjct: 4 AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLKE 62
Query: 462 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 518
G ++F+ F+ ++ +L DSE+ +R AF FD + E ++
Sbjct: 63 A----PGPLNFTMFL--SIFSDKLSGTDSEE-TIR--NAFAMFDEQETKKLNIEYIKDLL 113
Query: 519 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
+ G + + +EA ++ G+ +F +++
Sbjct: 114 ENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191 | Back alignment and structure |
|---|
Score = 99.5 bits (248), Expect = 3e-24
Identities = 27/168 (16%), Positives = 45/168 (26%), Gaps = 22/168 (13%)
Query: 407 ASTLDDEELADLRDQFDAI-DVDKNGSIS---LEEMRQALAKDLPWKLKESRVLE----- 457
A L D + + F+ D + +G I E + + W + E
Sbjct: 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATL 62
Query: 458 ------ILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 508
+ + D N D V E++ + + E E F+ D
Sbjct: 63 KLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSG 122
Query: 509 DGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 552
D I E G D + ++ F RL
Sbjct: 123 DNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWT 170
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 3e-24
Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 30/167 (17%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR------VLEILQAIDCNT 466
+ + + D D +G + +E++ + ++L K++ + +
Sbjct: 13 ITASQFFEIWLHFDADGSGYLEGKELQNLI-QELLQARKKAGLELSPEMKTFVDQYGQRD 71
Query: 467 DGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 518
DG + E L + + ++ S + + K+D D GFI EEL+
Sbjct: 72 DGKIGIVELAHVLPTEENFLLLFRCQQLKSCE-EFM--KTWRKYDTDHSGFIETEELKNF 128
Query: 519 -MHTGLKGS-----------IDPLLEEADIDKDGRISLSEFRRLLRT 553
K + D +L+ D + DG++ L+E RLL
Sbjct: 129 LKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263 | Back alignment and structure |
|---|
Score = 98.4 bits (245), Expect = 3e-23
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 23/186 (12%)
Query: 388 NMRQFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA--- 443
+ + + F L L E + + D D +G I EE++ L
Sbjct: 76 GIVELAHVLPTEENFLLLFRCQQLKSCE--EFMKTWRKYDTDHSGFIETEELKNFLKDLL 133
Query: 444 ----KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA--ATLHVHQLEEHDSEKWHLRS 497
K + +L+ D N DG ++ +E L+ +
Sbjct: 134 EKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEF 193
Query: 498 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEE--------ADIDKDGRISLSE 546
AFE +D D +G+I EL K + + + G++ ++
Sbjct: 194 NKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTD 253
Query: 547 FRRLLR 552
+L
Sbjct: 254 LALILS 259
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 65/381 (17%), Positives = 118/381 (30%), Gaps = 122/381 (32%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F+ RY + + LG G F +++ D VA+ K++ + E
Sbjct: 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAM------KVVKSAEHYT----------E 78
Query: 154 DVKREVKILQALA-------GHENVVKFYNAFE----DDNYVYIAMELCEGGELLDRILA 202
E+++L+++ E VV+ + F+ + ++ + E+ G LL I+
Sbjct: 79 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIK 137
Query: 203 KKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFK---------------- 245
+++Q+L+ H ++H D+KPEN L
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW 197
Query: 246 ------------------------------SAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
E +K D G + + K F + +
Sbjct: 198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTEDIQ 255
Query: 276 SAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF---------------------- 312
+ Y + EV + +D+WS + + L G F
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315
Query: 313 -------WDK--------TEDGIFKEVLRNKPDFRRKPWPSISN-------SAKDFVKKL 350
T+ G K + + KP + DF+ +
Sbjct: 316 GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM 375
Query: 351 LVKDPRARLTAAQALSHPWVR 371
L P R TAA+ L HPW+
Sbjct: 376 LELIPEKRATAAECLRHPWLN 396
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 99.1 bits (247), Expect = 4e-24
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L E +F +G ++L E +Q V ++ + D N DG
Sbjct: 11 LSATECHQWYKKFM--TECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGY 68
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 519
+DF E+VAA V + + LR F+ +D+D +G I EL
Sbjct: 69 IDFMEYVAALSLVLKGKVDQ----KLRW--YFKLYDVDGNGCIDRGELLNIIKAIRAINR 122
Query: 520 ---HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ + + ++ DI+ DG +SL EF ++
Sbjct: 123 CNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 8/122 (6%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES------RVL 456
+ AL+ L + LR F DVD NG I E+ +
Sbjct: 75 VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTN 134
Query: 457 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 516
+ ID N DG + EF+ L + + L + D PEE
Sbjct: 135 MVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRS--LDLTHIVKLIQNDGKNPHAPEE 192
Query: 517 LR 518
Sbjct: 193 AE 194
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 4e-24
Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 12/150 (8%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
L +E++A+ ++ F D D +G+I+ +E+ + + L E+ + +++ +D + +
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGN 362
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 524
G +DF EF+ T+ ++++ DSE+ +R AF FD D +G+I+ ELR + G K
Sbjct: 363 GTIDFPEFL--TMMARKMKDTDSEEE-IR--EAFRVFDKDGNGYISAAELRHVMTNLGEK 417
Query: 525 GS---IDPLLEEADIDKDGRISLSEFRRLL 551
+ +D ++ EADID DG+++ EF +++
Sbjct: 418 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 447
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256 | Back alignment and structure |
|---|
Score = 99.7 bits (248), Expect = 9e-24
Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 32/232 (13%)
Query: 342 SAKDFVKKLLVKDPRARLTAAQALS---HPWVREGGDASEIPIDISVLNNMRQFVKYSRL 398
K+ +K R R T + W+ S L + L
Sbjct: 20 GRIPLSKRESIKWQRPRFTRQALMRCCLIKWILSSAAPQGSDSSDSELELSTVRHQPEGL 79
Query: 399 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 458
Q + + +EL L F G + + + ++ P + +
Sbjct: 80 DQLQAQ---TKFTKKELQSLYRGFKNEC--PTGLVDEDTFKLIYSQFFPQGDATTYAHFL 134
Query: 459 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 518
A D + +G + F +FV + + H+ + + AF +DI++DG IT EE+
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHE------KLKWAFNLYDINKDGCITKEEML 188
Query: 519 M------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
++ ++ D ++DG +++ EF +
Sbjct: 189 AIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 1e-23
Identities = 65/318 (20%), Positives = 114/318 (35%), Gaps = 83/318 (26%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ + +G G++G + + G+ VAVK S +D K RE
Sbjct: 11 TLLECVGKGRYGEVWRGS--WQGENVAVKIF----------SSRDEK--------SWFRE 50
Query: 159 VKILQ-ALAGHENVVKFYNA----FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++ + HEN++ F + +++ E G L D + +
Sbjct: 51 TELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----------QLT 100
Query: 214 AVVVRQMLRVAAEC-----HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ LR+ HLH + HRD+K +N L K++ D
Sbjct: 101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADL 157
Query: 259 GLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITYILL 306
GL+ D+ VG+ Y+APEVL + D+W+ G++ + +
Sbjct: 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
Query: 307 CGRRPFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLV 352
+ F +V+ N P F +R P+ S+ + KL+
Sbjct: 218 RRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK 277
Query: 353 K----DPRARLTAAQALS 366
+ +P ARLTA +
Sbjct: 278 ECWYQNPSARLTALRIKK 295
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207 | Back alignment and structure |
|---|
Score = 97.5 bits (243), Expect = 2e-23
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 27/184 (14%)
Query: 388 NMRQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAIDVD--KNGSISLEEMRQALA 443
++ LAS EE+ L + F + +G I EE + AL
Sbjct: 7 KKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALF 66
Query: 444 KDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 502
++ + + + + I D +G+++F EFV + L V EK AF+
Sbjct: 67 RN---RNRRNLFADRIFDVFDVKRNGVIEFGEFVRS-LGVFHPSAPVHEKVKF----AFK 118
Query: 503 KFDIDRDGFITPEELR-------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFR 548
+D+ + GFI EEL+ + L S +D +AD DG+I + E++
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178
Query: 549 RLLR 552
+
Sbjct: 179 DFVS 182
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204 | Back alignment and structure |
|---|
Score = 97.6 bits (243), Expect = 2e-23
Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 35/205 (17%)
Query: 394 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
++S + A+ D +L + +F ++ +G++ + E ++ K +
Sbjct: 4 QFSWEEAEENGAV-GAADAAQLQEWYKKF--LEECPSGTLFMHEFKRFF-KVPDNEEATQ 59
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
V + +A D N D +DF E+VAA V + KW F+ +D DR+G I
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCID 113
Query: 514 PEELR-----------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 550
+EL + +D + D + DG++SL+EF
Sbjct: 114 RQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG 173
Query: 551 LRT--ASISSRNVPPSPSGHRNPRK 573
R + + +PS + ++
Sbjct: 174 ARRDKWVMKMLQMDLNPSSWISQQR 198
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 68/318 (21%), Positives = 117/318 (36%), Gaps = 83/318 (26%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ K +G G++G ++ K G++VAVK RE
Sbjct: 40 QMVKQIGKGRYGEVWMG--KWRGEKVAVKVF------------------FTTEEASWFRE 79
Query: 159 VKILQ-ALAGHENVVKFYNAFEDDNY----VYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+I Q L HEN++ F A +Y+ + E G L D + K
Sbjct: 80 TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----------KST 129
Query: 214 AVVVRQMLRVAAE-----CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ + ML++A CHLH + HRD+K +N L K++ + D
Sbjct: 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADL 186
Query: 259 GLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPES-------DVWSIGVITYILL 306
GL+ DI VG+ Y+ PEVL D++S G+I + +
Sbjct: 187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
Query: 307 CGRRPFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLV 352
E + + +++ + P + R +P+ S+ + KL+
Sbjct: 247 RRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMT 306
Query: 353 K----DPRARLTAAQALS 366
+ +P +RLTA +
Sbjct: 307 ECWAHNPASRLTALRVKK 324
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 99.9 bits (249), Expect = 4e-23
Identities = 64/314 (20%), Positives = 116/314 (36%), Gaps = 81/314 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ + +G G+FG + K G+ VAVK S ++ + + E
Sbjct: 45 VLQESIGKGRFGEVWRG--KWRGEEVAVKIF----------SSREERSWF------REAE 86
Query: 159 VKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+ L HEN++ F A DN ++ + E G L D +
Sbjct: 87 IYQTVMLR-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL----------NRYT 135
Query: 215 VVVRQMLRVAAEC-----HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFG 259
V V M+++A HLH + HRD+K +N L K++ + D G
Sbjct: 136 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLG 192
Query: 260 LSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITYILLC 307
L+ DI VG+ Y+APEVL + +D++++G++ + +
Sbjct: 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
Query: 308 GRRPFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLV- 352
+ + + +++ + P R P+ S A + K++
Sbjct: 253 RCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE 312
Query: 353 ---KDPRARLTAAQ 363
+ ARLTA +
Sbjct: 313 CWYANGAARLTALR 326
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 4e-23
Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+ + L + F +D D++G IS E++QAL+ V I+ D V
Sbjct: 2 ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61
Query: 471 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS- 526
+FSEF ++ W Q F +D D G I EL+ G + S
Sbjct: 62 NFSEFTGVWKYI--------TDW----QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 109
Query: 527 --IDPLLEEADIDKDGRISLSEFRRLL 551
D L+ + D G+I+ +F +
Sbjct: 110 QFHDILIRKFDRQGRGQIAFDDFIQGC 136
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 4e-15
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 474
+ D ++ F D D +G I E++QAL ++L + +++ D G + F +
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQAL-SGFGYRLSDQFHDILIRKFDRQGRGQIAFDD 131
Query: 475 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
F+ + + +L + F ++D D+DG+I
Sbjct: 132 FIQGCIVLQRLTD------------IFRRYDTDQDGWIQ 158
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 8e-23
Identities = 51/239 (21%), Positives = 94/239 (39%), Gaps = 33/239 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ +GK +G G FG + + + VA+K +E K +
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAPQL----------------H 52
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E + + L + + + Y Y + +EL G L+ + D ++ K ++
Sbjct: 53 LEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMI 110
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFI-------KP 266
Q++ H L++RD+KPENFL K + DF L+ ++I P
Sbjct: 111 AIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIP 170
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VITYILLCGRRPFWDKTEDGIFKE 323
++ + + G+A Y++ K D+ ++G + Y L G P W + KE
Sbjct: 171 YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMY-FLRGSLP-WQGLKADTLKE 227
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 1e-22
Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
S+L+ ++ L + + E+ + F + +G +S+EE ++ P+
Sbjct: 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ + D N DG +DF EF+ A + + KW AF +D+D +G+I+
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 117
Query: 514 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
E+ + + + + + D ++DG++SL EF R +
Sbjct: 118 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 2e-22
Identities = 55/239 (23%), Positives = 92/239 (38%), Gaps = 56/239 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+G+ +G G FG + +A+ VAVK + F +E
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFL--------------QE 162
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+IL+ H N+V+ +YI MEL +GG+ L L + +R + V+
Sbjct: 163 ARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF-LRTEGAR-------LRVK 213
Query: 219 QMLRVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+L++ + +HRD+ N L E + LK +DFG+S +
Sbjct: 214 TLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMS---------R 261
Query: 272 DIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
+ Y APE L + ESDVWS G++ + G P+ + +
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 99.7 bits (248), Expect = 2e-22
Identities = 49/226 (21%), Positives = 91/226 (40%), Gaps = 29/226 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
++ +G+ +G G FG Y+ T+ + VA+K +E K +
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQL----------------L 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E KI + L G + + +Y + M+L G L+ + + + K ++
Sbjct: 51 YESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLML 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGK 268
QM+ H +HRD+KP+NFL + + + DFGL+ + P +
Sbjct: 109 ADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYR 168
Query: 269 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 313
+ +++ G+A Y + D+ S+G + L G P W
Sbjct: 169 ENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-W 213
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 96.7 bits (241), Expect = 2e-22
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y +G+ +G G FG + T+ N +VA+K E + + +
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-EPRRSDAPQL----------------R 53
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E + + LAG + Y ++ + + ++L G L+ +L +++ K A+
Sbjct: 54 DEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMA 111
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFI-------KP 266
+QML H LV+RD+KP+NFL ++K + + DFG+ + P
Sbjct: 112 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP 171
Query: 267 GKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
++ +++ G+A Y++ L R+ D+ ++G + L G P W + K+
Sbjct: 172 YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP-WQGLKAATNKQ 228
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 3e-22
Identities = 66/312 (21%), Positives = 110/312 (35%), Gaps = 57/312 (18%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD-- 93
H+HH + T ++ + Q + K + S T P
Sbjct: 6 HHHHHDYDIPTTENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDL 65
Query: 94 --FDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLK 145
R+ T+ + LGHG FG Y + N +VAVK + + S QD
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV------CSEQDEL 119
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
D E I+ H+N+V+ +I +EL GG+L + +
Sbjct: 120 --------DFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 170
Query: 206 SRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ +++ + +L VA + +L + +HRD+ N L K DF
Sbjct: 171 R--PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 228
Query: 259 GLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-I 304
G++ +DI + YY PE ++D WS GV+ + I
Sbjct: 229 GMA---------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 305 LLCGRRPFWDKT 316
G P+ K+
Sbjct: 280 FSLGYMPYPSKS 291
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 95.5 bits (237), Expect = 4e-22
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------E 457
S + + A + D D NG I +E+ + + KL+ +
Sbjct: 3 SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFF-RHMLKKLQPKDKITDERVQQIKKS 61
Query: 458 ILQAIDCNTDGLVDFSEFVAATL--------HVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
+ A D DG + E L + D+ ++ + K+D D
Sbjct: 62 FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMK---IWRKYDADSS 118
Query: 510 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555
G+I+ EL+ L D +++ D +KDGR+ L++ R+L
Sbjct: 119 GYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQE 178
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 91.3 bits (226), Expect = 1e-20
Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 27/176 (15%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA-------KDLPWKLKESRV 455
L + + + D D +G IS E++ L K +P +
Sbjct: 91 LLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYT 150
Query: 456 LEILQAIDCNTDGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
+++ D N DG +D ++ L +++ + + F +D+ R
Sbjct: 151 DAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210
Query: 510 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
G + E+ L + LL D++KDG+I SE L
Sbjct: 211 GALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 56.6 bits (136), Expect = 5e-09
Identities = 25/188 (13%), Positives = 58/188 (30%), Gaps = 37/188 (19%)
Query: 402 ALRALASTLDDEELAD-------LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 454
R + L ++ + A D +G + +EE+ + L R
Sbjct: 36 FFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFR 95
Query: 455 ----------VLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFE 502
++I + D ++ G + +E L + ++ K + A +
Sbjct: 96 REAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK 155
Query: 503 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEA------------------DIDKDGRISL 544
FD ++DG + +L L+ + + D+ + G +
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEG 215
Query: 545 SEFRRLLR 552
E ++
Sbjct: 216 PEVDGFVK 223
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 5e-06
Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 13/140 (9%)
Query: 398 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK------ 451
LK L+ ++ D +K+G + L ++ + LA + L+
Sbjct: 130 LKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDAS 189
Query: 452 -----ESRVLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFEKF 504
+ +I D + G ++ E + +
Sbjct: 190 SQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHC 249
Query: 505 DIDRDGFITPEELRMHTGLK 524
D+++DG I EL + GLK
Sbjct: 250 DMNKDGKIQKSELALCLGLK 269
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 9e-22
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 396 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 455
R Q + + + ++ + ++ F ID DK+G IS ++R L E +
Sbjct: 37 KRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS-LGRLCTEQEL 95
Query: 456 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
++ G ++F+ F+ T+ ++ D E + AF FD + DG E
Sbjct: 96 DSMVA----EAPGPINFTMFL--TIFGDRIAGTDEEDV-IV--NAFNLFD-EGDGKCKEE 145
Query: 516 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
L+ G K S +D L EA ID +G I + +F ++L
Sbjct: 146 TLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 89.9 bits (224), Expect = 2e-21
Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 472
+++ F D D +G +S+EE+ AL + L + + I ++ D
Sbjct: 2 ASADQIQECFQIFDKDNDGKVSIEELGSAL-RSLGKNPTNAELNTIKGQLNAKE---FDL 57
Query: 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 526
+ F T++ ++ + + AF D + +G I ELR ++ G +
Sbjct: 58 ATFK--TVYRKPIKTPTEQSKEML--DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSE 113
Query: 527 IDPLLEEADIDKDGRISLSEFRRLLRT 553
++ L++E + DG I+ F +L T
Sbjct: 114 VEELMKEVSVSGDGAINYESFVDMLVT 140
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145 | Back alignment and structure |
|---|
Score = 56.4 bits (137), Expect = 8e-10
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+ + ++ D F A+D + NG+I E+RQ L L L S V E+++ + + DG +
Sbjct: 73 EQSK--EMLDAFRALDKEGNGTIQEAELRQLLLN-LGDALTSSEVEELMKEVSVSGDGAI 129
Query: 471 DFSEFV 476
++ FV
Sbjct: 130 NYESFV 135
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 66/314 (21%), Positives = 115/314 (36%), Gaps = 81/314 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ ++ G+FG + A + VAVK QD + + E
Sbjct: 27 QLLEVKARGRFGCVWKAQ--LLNEYVAVKIF----------PIQDKQS------WQNEYE 68
Query: 159 VKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAA 214
V L + HEN+++F A + V ++ E G L D + K
Sbjct: 69 VYSLPGMK-HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----------KANV 117
Query: 215 VVVRQMLRVAAE-----CHLH------------GLVHRDMKPENFLFKSAKEDSSLKATD 257
V ++ +A +LH + HRD+K +N L K + + D
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIAD 174
Query: 258 FGLSDFIKPGKKFQDI---VGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCG 308
FGL+ + GK D VG+ Y+APEVL +R + D++++G++ + L
Sbjct: 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
Query: 309 RRPFWDKTEDGI--FKEVLRNKPDF--------RRKPWPSISNS-AKDFVKKLLVK---- 353
++ + F+E + P +K P + + K +L +
Sbjct: 235 CTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEE 294
Query: 354 ----DPRARLTAAQ 363
D ARL+A
Sbjct: 295 CWDHDAEARLSAGC 308
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 2e-21
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%)
Query: 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDF 472
+D F D G+I+ + + L + + + V +I+ A +
Sbjct: 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYL-RAIGYNPTNQLVQDIINADSSLRDASSLTL 60
Query: 473 SEFVAATLHVHQLEEHDSEKWHLRSQ--AAFEKFDIDRDGFITPEELR---MHTGLKGS- 526
+ L +E D+ AF+ FD + G ++ +LR G K +
Sbjct: 61 DQIT--GLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD 118
Query: 527 --IDPLLEEADIDKDGRISLSEFRRLL 551
+D LL+ ++D +G I +F +
Sbjct: 119 AEVDELLKGVEVDSNGEIDYKKFIEDV 145
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 2e-21
Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 28/177 (15%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
S+L Q L+ L + D +EL F +G ++ E ++ + P+ +
Sbjct: 6 SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDC--PSGHLNKSEFQKIYKQFFPFGDPSA 63
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ D + +G +DF EF+ A + E +D W AF+ +D+D +G I+
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIW------AFQLYDLDNNGLIS 117
Query: 514 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+E+ + ++ + D +KDG+++L EF +
Sbjct: 118 YDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185 | Back alignment and structure |
|---|
Score = 90.4 bits (224), Expect = 3e-21
Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 22/165 (13%)
Query: 410 LDDEELADLRDQFDAI-DVDKNGSISLEE---MRQALAKDLPWKLKESRVLEILQAI--- 462
L+D + ++ FD D++ +GSI + M + L ++ + ++
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 463 --------DCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
D N D +V + E++A T+ + R F+ D+ DG
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 512 ITPEELRM---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 552
+ EE + + L+ + + + L+ ++ L
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 93.6 bits (233), Expect = 4e-21
Identities = 60/248 (24%), Positives = 88/248 (35%), Gaps = 55/248 (22%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
F+ R+ LG G FG Y G VAVK+ L+
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQ---------------LQHSG 64
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDS 206
P D +RE++IL+AL + +VK+ + + ME G L D L + +
Sbjct: 65 PDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDF-LQRHRA 122
Query: 207 RYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R + Q + VHRD+ N L + ++ +K DFGL+
Sbjct: 123 RLDASRLLLYSSQ---ICKGMEYLGSRRCVHRDLAARNIL---VESEAHVKIADFGLAKL 176
Query: 264 IKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGR 309
+ K YYV APE L +SDVWS GV+ Y +
Sbjct: 177 LPLDKD--------YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228
Query: 310 RPFWDKTE 317
+ E
Sbjct: 229 KSCSPSAE 236
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 5e-21
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 11/149 (7%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTD 467
+ ++L + ++ F+ D +G I + + + L + VL++L D
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 524
VDF F+ V + + + F FD + +G + ELR G K
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYED-YL--EGFRVFDKEGNGKVMGAELRHVLTTLGEK 119
Query: 525 GSIDPLLE--EADIDKDGRISLSEFRRLL 551
+ + + D +G I+ F + +
Sbjct: 120 MTEEEVETVLAGHEDSNGCINYEAFLKHI 148
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 6e-21
Identities = 61/263 (23%), Positives = 102/263 (38%), Gaps = 65/263 (24%)
Query: 81 PCGKRTD-----FGYDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK 133
P G + GY + D + T K LG GQFG + D VA+K I++
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGS 60
Query: 134 ILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 193
+ + ++ E K++ L+ HE +V+ Y ++I E
Sbjct: 61 M----------------SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMAN 103
Query: 194 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKS 246
G LL+ L + R+ +Q+L + + +L +HRD+ N L
Sbjct: 104 GCLLN-YLREMRHRFQ-------TQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL--- 152
Query: 247 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESD 294
+ +K +DFGLS + ++ Y PEVL K +SD
Sbjct: 153 VNDQGVVKVSDFGLS---------RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 295 VWSIGVITY-ILLCGRRPFWDKT 316
+W+ GV+ + I G+ P+ T
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFT 226
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 65/276 (23%), Positives = 102/276 (36%), Gaps = 63/276 (22%)
Query: 58 KNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHGQFGYTYV 114
K Q++ K + T + P T Y++ F R GK LG G FG
Sbjct: 9 KPKYQVRWKIIESYEGNSYTFIDP----TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 115 AT----DKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169
AT K + +VAVK ++ + E + E+KI+ L HE
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKST------AHADEK--------EALMSELKIMSHLGQHE 110
Query: 170 NVVKFYNAFEDDNYVYIAMELCEGGELLD-----RILAKKDSRYTEKDAAVVVRQMLRVA 224
N+V A V + E C G+LL+ + + D + ++ R +L +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 225 AE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ L +HRD+ N L K DFGL+ +DI+ +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVL---LTNGHVAKIGDFGLA---------RDIMNDS 218
Query: 278 YYV------------APEVLK-RKSGPESDVWSIGV 300
Y+ APE + +SDVWS G+
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 90.7 bits (226), Expect = 2e-20
Identities = 49/234 (20%), Positives = 93/234 (39%), Gaps = 50/234 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T + +G GQFG ++ N D+VA+K I + + + ED E
Sbjct: 11 TFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----------------SEEDFIEE 53
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
+++ L+ H +V+ Y + + + E E G L D L + + + +
Sbjct: 54 AEVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSD-YLRTQRGLFAAETLLGMCL 111
Query: 219 QMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
V ++HRD+ N L E+ +K +DFG++ + ++
Sbjct: 112 D---VCEGMAYLEEACVIHRDLAARNCL---VGENQVIKVSDFGMT---------RFVLD 156
Query: 276 SAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
Y +PEV + +SDVWS GV+ + + G+ P+ +++
Sbjct: 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 63/302 (20%), Positives = 106/302 (35%), Gaps = 68/302 (22%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRY-TIGKLLGHG 107
+ H H S V+ + + T K++G G
Sbjct: 4 YHHHHHHDYDIPTTENLYFQGAMGSDPNQAVLK--------FTTEIHPSCVTRQKVIGAG 55
Query: 108 QFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQ 163
+FG Y K + + VA+K ++ + V F E I+
Sbjct: 56 EFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFL--------------GEAGIMG 101
Query: 164 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 223
+ H N+++ + I E E G L L +KD ++ V Q++ +
Sbjct: 102 QFS-HHNIIRLEGVISKYKPMMIITEYMENGALDK-FLREKDGEFS-------VLQLVGM 152
Query: 224 AAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+L VHRD+ N L + K +DFGLS + +D +
Sbjct: 153 LRGIAAGMKYLANMNYVHRDLAARNIL---VNSNLVCKVSDFGLSRVL------EDDPEA 203
Query: 277 AYYV----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
Y APE + RK SDVWS G++ + ++ G RP+W+ + EV
Sbjct: 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEV 259
Query: 325 LR 326
++
Sbjct: 260 MK 261
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 3e-20
Identities = 68/308 (22%), Positives = 104/308 (33%), Gaps = 72/308 (23%)
Query: 47 HKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGK----RTDFGYDKDFDRRY-TIG 101
H H H R Y Q K Q P R + ++ + I
Sbjct: 2 HHHHHHSSGRENLYFQGKL-------PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIE 54
Query: 102 KLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K++G G G + G R VA+K ++ + F E
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL--------------SE 100
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
I+ H N+++ I E E G L L D ++T +
Sbjct: 101 ASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDT-FLRTHDGQFT-------IM 151
Query: 219 QMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
Q++ + +L G VHRD+ N L + K +DFGLS ++
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDP--- 205
Query: 272 DIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTED 318
A Y APE + R SDVWS GV+ + +L G RP+W+ T
Sbjct: 206 ----DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN- 260
Query: 319 GIFKEVLR 326
++V+
Sbjct: 261 ---RDVIS 265
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 3e-20
Identities = 72/329 (21%), Positives = 118/329 (35%), Gaps = 74/329 (22%)
Query: 32 EAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSR--RQTGVIPCGKRT--- 86
E + H + + K + R +L H T + T P KR
Sbjct: 148 EGRVYH-YRINTASDGKLYVSSESRFNTLAELV--HHHSTVADGLITTLHYPAPKRNKPT 204
Query: 87 ----DFGYDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS 140
YDK + +R T+ LG GQ+G Y K VAVK ++++
Sbjct: 205 IYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-------- 256
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI 200
+ VE+ +E +++ + H N+V+ + YI E G LLD
Sbjct: 257 --------TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLD-- 305
Query: 201 LAKKDSRY--TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDS 251
Y V +L +A + +L +HR++ N L E+
Sbjct: 306 -------YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENH 355
Query: 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIG 299
+K DFGLS + + G Y APE L K +SDVW+ G
Sbjct: 356 LVKVADFGLS---------RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 406
Query: 300 VITY-ILLCGRRPFWDKTEDGIFKEVLRN 327
V+ + I G P+ +++ + ++
Sbjct: 407 VLLWEIATYGMSPYPGIDLSQVYELLEKD 435
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 4e-20
Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 28/177 (15%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
S+LK + L ++E+ F I +G + ++ + P+
Sbjct: 6 SKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTK 63
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ D N DG ++FSEF+ A + + +W AF+ +D+D DG+IT
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW------AFKLYDLDNDGYIT 117
Query: 514 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
E+ + +D + D + DG+++L EF+ +
Sbjct: 118 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 4e-20
Identities = 50/238 (21%), Positives = 85/238 (35%), Gaps = 51/238 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
K+LG G FG Y G++ VA+K++ + P A ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--------------SPKANKE 63
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+ E ++ ++ + +V + V + +L G LLD + + +
Sbjct: 64 ILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLLDY-VREHKDNIGSQYLL 120
Query: 215 VVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
Q +A + LVHRD+ N L K +K TDFGL+ +
Sbjct: 121 NWCVQ---IAKGMNYLEDRRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGA----- 169
Query: 272 DIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
Y A E + R +SDVWS GV + ++ G +P+
Sbjct: 170 ---EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 8e-20
Identities = 55/242 (22%), Positives = 88/242 (36%), Gaps = 57/242 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ + LG G FG A + VAVK ++ + + P A++D
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV------------LSQPEAMDDF 68
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
REV + +L H N+++ Y + + EL G LLDR+ +
Sbjct: 69 IREVNAMHSLD-HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGH--------F 118
Query: 216 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
++ + R A + +L +HRD+ N L + +K DFGL +
Sbjct: 119 LLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRALPQND 175
Query: 269 KFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 314
+YV APE LK R SD W GV + + G+ P+
Sbjct: 176 D--------HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227
Query: 315 KT 316
Sbjct: 228 LN 229
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 9e-20
Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 410 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
L +E+ DL+D F+ D G++ ++ + L + V + +
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVGG-THKMGE 60
Query: 468 GLVDFSEFVAATLHVHQL-EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 523
+ F EF+ + + E + AF+ FD + GFI+ ELR G
Sbjct: 61 KSLPFEEFL--PAYEGLMDCEQGTFA-DYM--EAFKTFDREGQGFISGAELRHVLTALGE 115
Query: 524 KGS---IDPLLEEADI--DKDGRISLSEFRRLLRTASISSR 559
+ S +D +++ D+ D +G + +F + + +
Sbjct: 116 RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPDK 156
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 1e-19
Identities = 63/254 (24%), Positives = 96/254 (37%), Gaps = 60/254 (23%)
Query: 94 FDRRY-TIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPI 150
D ++G G FG A K +G R A+K++++ S D +
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY------ASKDDHR----- 70
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RILAK 203
D E+++L L H N++ A E Y+Y+A+E G LLD
Sbjct: 71 ---DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 204 KDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDSSLKAT 256
+ + + +Q+L AA+ +L +HRD+ N L E+ K
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL---VGENYVAKIA 184
Query: 257 DFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY 303
DFGLS + Q+ YV A E L SDVWS GV+ +
Sbjct: 185 DFGLS-------RGQE-----VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 232
Query: 304 -ILLCGRRPFWDKT 316
I+ G P+ T
Sbjct: 233 EIVSLGGTPYCGMT 246
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 1e-19
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 62/240 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
T+ K LG GQFG + K VAVK I++ + + ++ +E
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSM----------------SEDEFFQE 53
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD--RILAKKDSRYTEKDAAVV 216
+ + L+ H +VKFY + +YI E G LL+ R +
Sbjct: 54 AQTMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR----------SHGKGLE 102
Query: 217 VRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
Q+L + + L H +HRD+ N L D +K +DFG++
Sbjct: 103 PSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCL---VDRDLCVKVSDFGMT-------- 151
Query: 270 FQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
+ ++ Y APEV K +SDVW+ G++ + + G+ P+ T
Sbjct: 152 -RYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 1e-19
Identities = 59/252 (23%), Positives = 97/252 (38%), Gaps = 53/252 (21%)
Query: 92 KDFDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLK 145
K+ R+ T+ + LGHG FG Y + N +VAVK + + S QD
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV------CSEQDEL 78
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
D E I+ H+N+V+ +I MEL GG+L + +
Sbjct: 79 --------DFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP 129
Query: 206 SRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDF 258
+ +++ + +L VA + +L + +HRD+ N L K DF
Sbjct: 130 R--PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF 187
Query: 259 GLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-I 304
G++ +DI ++YY PE ++D WS GV+ + I
Sbjct: 188 GMA---------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 305 LLCGRRPFWDKT 316
G P+ K+
Sbjct: 239 FSLGYMPYPSKS 250
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 89.0 bits (221), Expect = 2e-19
Identities = 71/325 (21%), Positives = 103/325 (31%), Gaps = 89/325 (27%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD---FDRRY-TIGKLL 104
+ H H +Y T+ + G D+D F+ R+ + L
Sbjct: 4 YHHHHHH---DYDIPTTE-----------NLYFQGAMGSAFEDRDPTQFEERHLKFLQQL 49
Query: 105 GHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK 160
G G FG Y G+ VAVKK L+ + D +RE++
Sbjct: 50 GKGNFGSVEMCRYDPLQDNTGEVVAVKK---------------LQHSTEEHLRDFEREIE 94
Query: 161 ILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
IL++L H+N+VK+ + + ME G L D L K R
Sbjct: 95 ILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY-LQKHKERIDHIKLLQYTS 152
Query: 219 QMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
Q + +HRD+ N L + ++ +K DFGL+ + K+
Sbjct: 153 Q---ICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKE------ 200
Query: 276 SAYYV------------APEVLK-RKSGPESDVWSIGV-----ITYILLCGRRPFWDKTE 317
YY APE L K SDVWS GV TYI P
Sbjct: 201 --YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 258
Query: 318 DGIFKEVLRNKPDFRRKPWPSISNS 342
G +
Sbjct: 259 IG-------------NDKQGQMIVF 270
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149 | Back alignment and structure |
|---|
Score = 84.5 bits (210), Expect = 2e-19
Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 13/150 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT--D 467
D ++ F D + I+ ++ + L + + +IL
Sbjct: 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIA-RALGQNPTNAEINKILGNPSKEEMNA 60
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 524
+ F EF+ ++ + + + FD + +G + ELR G K
Sbjct: 61 AAITFEEFLPMLQAAANNKDQGTFEDFVE---GLRVFDKEGNGTVMGAELRHVLATLGEK 117
Query: 525 GS---IDPLLEEADIDKDGRISLSEFRRLL 551
+ ++ L++ + D +G I+ F + +
Sbjct: 118 MTEEEVEELMKGQE-DSNGCINYEAFVKHI 146
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-19
Identities = 42/242 (17%), Positives = 75/242 (30%), Gaps = 53/242 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+ LG G F + + GD V +K L
Sbjct: 11 IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKV---------------LDKAHRNY 55
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
E ++ L+ H+++V Y + + E + G L L K +
Sbjct: 56 SESFFEAASMMSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDT-YLKKNKNCINIL 113
Query: 212 DAAVVVRQMLRVAAECH---LHGLVHRDMKPENFL-----FKSAKEDSSLKATDFGLSDF 263
V +Q +AA H + L+H ++ +N L + +K +D G+S
Sbjct: 114 WKLEVAKQ---LAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-- 168
Query: 264 IKPGKKFQDIVGSAYY------VAPEVLK--RKSGPESDVWSIGVITY-ILLCGRRPFWD 314
++ V PE ++ + +D WS G + I G +P
Sbjct: 169 -------ITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221
Query: 315 KT 316
Sbjct: 222 LD 223
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 87.6 bits (218), Expect = 2e-19
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 60/250 (24%)
Query: 87 DFGYDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDL 144
+F + + + + +G G+FG + G++VAVK I+ +
Sbjct: 10 EFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDA----------- 56
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAK 203
+ E ++ L H N+V+ E+ +YI E G L+D
Sbjct: 57 ------TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD----- 104
Query: 204 KDSRY--TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLK 254
Y + + + +L+ + + +L + VHRD+ N L ED+ K
Sbjct: 105 ----YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAK 157
Query: 255 ATDFGLSDFI---KPGKKFQDIVGSAYYV---APEVLK-RKSGPESDVWSIGVITY-ILL 306
+DFGL+ + K V APE L+ +K +SDVWS G++ + I
Sbjct: 158 VSDFGLTKEASSTQDTGKLP--------VKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 307 CGRRPFWDKT 316
GR P+
Sbjct: 210 FGRVPYPRIP 219
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 89.8 bits (223), Expect = 3e-19
Identities = 58/279 (20%), Positives = 102/279 (36%), Gaps = 69/279 (24%)
Query: 67 QHQKTNSRR--QTGVIPCGKRTDFGYDKDFDR-----RYTIGKLLGHGQFGYTYVATDKA 119
H K + Q +PC + + K LG GQFG ++AT
Sbjct: 152 DHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK 211
Query: 120 NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179
+ VAVK ++ ++VE E +++ L H+ +VK +
Sbjct: 212 HTK-VAVKTMKPGS----------------MSVEAFLAEANVMKTLQ-HDKLVKLHAVVT 253
Query: 180 DDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAE-----CHL--H 230
+ +YI E G LLD + +++ + + +++ +A+ +
Sbjct: 254 KEP-IYIITEFMAKGSLLD---------FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---------- 280
+HRD++ N L K DFGL+ + I + Y
Sbjct: 304 NYIHRDLRAANILV---SASLVCKIADFGLA---------RVIEDNEYTAREGAKFPIKW 351
Query: 281 -APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
APE + +SDVWS G++ I+ GR P+ +
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 3e-19
Identities = 62/277 (22%), Positives = 91/277 (32%), Gaps = 72/277 (25%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
F+ R+ + LG G FG Y G+ VAVKK L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK---------------LQHST 51
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDS 206
+ D +RE++IL++L H+N+VK+ + + ME G L D L K
Sbjct: 52 EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY-LQKHKE 109
Query: 207 RYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
R Q + +HRD+ N L + ++ +K DFGL+
Sbjct: 110 RIDHIKLLQYTSQ---ICKGMEYLGTKRYIHRDLATRNIL---VENENRVKIGDFGLTKV 163
Query: 264 IKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV-----ITYIL 305
+ K+ ++ APE L K SDVWS GV TYI
Sbjct: 164 LPQDKE--------FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
Query: 306 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 342
P G +
Sbjct: 216 KSKSPPAEFMRMIG-------------NDKQGQMIVF 239
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 4e-19
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 457 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+I +AI G D+ F + + ++ FE D D+ GFI E
Sbjct: 10 DINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQ------VK--EVFEILDKDQSGFIEEE 61
Query: 516 ELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 554
EL+ G + LL D D DG+I EF +++ A
Sbjct: 62 ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 59.1 bits (144), Expect = 4e-11
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 460
+ + +++ F+ +D D++G I EE++ L L ++ +L
Sbjct: 30 FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87
Query: 461 AIDCNTDGLVDFSEFVA 477
A D + DG + EF
Sbjct: 88 AGDSDHDGKIGADEFAK 104
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224 | Back alignment and structure |
|---|
Score = 85.4 bits (211), Expect = 5e-19
Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 26/191 (13%)
Query: 380 PIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMR 439
P + + + + R + + EL L F +G ++ E +
Sbjct: 18 PSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEETFK 75
Query: 440 QALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 499
Q A+ P + + A D G V F +FV A + + H+ +W
Sbjct: 76 QIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRW------ 129
Query: 500 AFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADIDKDGR 541
F +DI++DG+I EE+ + +D ++ D +KDG
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189
Query: 542 ISLSEFRRLLR 552
++L EF +
Sbjct: 190 VTLDEFLESCQ 200
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 6e-19
Identities = 63/264 (23%), Positives = 94/264 (35%), Gaps = 64/264 (24%)
Query: 86 TDFGYDKD--FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD-RVAVKKIEKNKILIR 137
T YD F R R + GK LG G FG AT K++ VAVK ++ +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS----- 64
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
+ E + E+K+L L H N+V A + E C G+LL
Sbjct: 65 -AHLTER--------EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 198 D---------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPEN 241
+ + + + A+ + +L + + L +HRD+ N
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 242 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RK 288
L K DFGL+ +DI + YV APE +
Sbjct: 176 IL---LTHGRITKICDFGLA---------RDIKNDSNYVVKGNARLPVKWMAPESIFNCV 223
Query: 289 SGPESDVWSIGVITY-ILLCGRRP 311
ESDVWS G+ + + G P
Sbjct: 224 YTFESDVWSYGIFLWELFSLGSSP 247
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 86.1 bits (214), Expect = 6e-19
Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 58/259 (22%)
Query: 90 YDK-DFDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
YDK + +R T+ LG GQ+G Y K VAVK ++++
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-------------- 50
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
+ VE+ +E +++ + H N+V+ + YI E G LLD +
Sbjct: 51 --MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 107
Query: 208 YTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+ +L +A + +L +HRD+ N L E+ +K DFGL
Sbjct: 108 VS-------AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGL 157
Query: 261 SDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLC 307
S + G Y APE L K +SDVW+ GV+ + I
Sbjct: 158 SRLMT---------GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 308 GRRPFWDKTEDGIFKEVLR 326
G P+ +++ + +
Sbjct: 209 GMSPYPGIDLSQVYELLEK 227
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 86.9 bits (216), Expect = 7e-19
Identities = 66/277 (23%), Positives = 101/277 (36%), Gaps = 71/277 (25%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGD-------RVAVKKIEKNKILIRV 138
YD F R R +GK LG G FG A A G VAVK +++
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD--AFGIDKTATCRTVAVKMLKEG------ 68
Query: 139 VSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELL 197
+ + + + E+KIL + H NVV A + + + +E C+ G L
Sbjct: 69 ATHSEHR--------ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 198 D-------RILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFL 243
+ K + + + ++ + + L +HRD+ N L
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180
Query: 244 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSG 290
E + +K DFGL+ +DI YV APE + R
Sbjct: 181 ---LSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 228
Query: 291 PESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 326
+SDVWS GV+ + I G P+ D +E R
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKID---EEFCR 262
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 88.8 bits (220), Expect = 7e-19
Identities = 67/329 (20%), Positives = 119/329 (36%), Gaps = 78/329 (23%)
Query: 36 RHNHHARNDTTHKHQHQHQERAKNYQQLKTK--------QHQKTNS----RRQTGVIPCG 83
+A+ ++ + + Y +T+ + ++ R T V P
Sbjct: 191 SDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTS 250
Query: 84 KRTDFGYDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVV 139
K G KD R + LG G FG ++ T VA+K ++
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGT------ 303
Query: 140 SFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 199
++ E +E ++++ L HE +V+ Y ++ +YI E G LLD
Sbjct: 304 ----------MSPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLD- 350
Query: 200 ILAKKDSRY--TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKED 250
+ E + + Q++ +AA+ ++ VHRD++ N L E+
Sbjct: 351 --------FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL---VGEN 399
Query: 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSI 298
K DFGL+ + I + Y APE + +SDVWS
Sbjct: 400 LVCKVADFGLA---------RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 299 GVITY-ILLCGRRPFWDKTEDGIFKEVLR 326
G++ + GR P+ + +V R
Sbjct: 451 GILLTELTTKGRVPYPGMVNREVLDQVER 479
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 7e-19
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
LK++ V L A EF A + + ++ AF D D+
Sbjct: 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLASKSLDD------VK--KAFYVIDQDKS 55
Query: 510 GFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
GFI +EL++ + + L + D D DG I + EF +++
Sbjct: 56 GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 6e-11
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 464
L + L D++ F ID DK+G I +E++ L P L ++ L D
Sbjct: 32 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 91
Query: 465 NTDGLVDFSEFVA 477
+ DG++ EF A
Sbjct: 92 DGDGMIGVDEFAA 104
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 8e-19
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 60/237 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
+ + +G G+FG + G++VAVK I+ + + E
Sbjct: 196 KLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKND-----------------ATAQAFLAE 236
Query: 159 VKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAV 215
++ L H N+V+ E+ +YI E G L+D Y + + +
Sbjct: 237 ASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD---------YLRSRGRSVL 286
Query: 216 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
+L+ + + +L + VHRD+ N L ED+ K +DFGL+
Sbjct: 287 GGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT------- 336
Query: 269 KFQDIVGSAYYV-------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
++ + APE L+ +K +SDVWS G++ + I GR P+
Sbjct: 337 --KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 87.9 bits (218), Expect = 1e-18
Identities = 65/290 (22%), Positives = 109/290 (37%), Gaps = 70/290 (24%)
Query: 67 QHQKTNS----RRQTGVIPCGKRTDFGYDKD---FDR-RYTIGKLLGHGQFGYTYVATDK 118
+ ++ R T V P K G KD R + LG G FG ++ T
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206
Query: 119 ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178
RVA+K ++ ++ E +E ++++ L HE +V+ Y
Sbjct: 207 GTT-RVAIKTLKPGT----------------MSPEAFLQEAQVMKKLR-HEKLVQLYAVV 248
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAE-----CHL-- 229
++ +YI E G LLD + E + + Q++ +AA+ ++
Sbjct: 249 SEE-PIYIVTEYMSKGSLLD---------FLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 280
VHRD++ N L E+ K DFGL+ + I + Y
Sbjct: 299 MNYVHRDLRAANIL---VGENLVCKVADFGLA---------RLIEDNEYTARQGAKFPIK 346
Query: 281 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 326
APE + +SDVWS G++ + GR P+ + +V R
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 1e-18
Identities = 60/258 (23%), Positives = 101/258 (39%), Gaps = 59/258 (22%)
Query: 92 KDFDRRY-TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMI 147
K+ D +I K++G G+FG K + VA+K ++ + F
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----- 94
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
E I+ H N+++ V I E E G L L K D++
Sbjct: 95 ---------GEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDS-FLRKHDAQ 143
Query: 208 YTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGL 260
+T V Q++ + +L G VHRD+ N L + K +DFGL
Sbjct: 144 FT-------VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNIL---INSNLVCKVSDFGL 193
Query: 261 SDFIKPGKKFQDIVGSAYYV----------APEVLK-RKSGPESDVWSIGVITY-ILLCG 308
+ +D +AY +PE + RK SDVWS G++ + ++ G
Sbjct: 194 GRVL------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 309 RRPFWDKTEDGIFKEVLR 326
RP+W+ + ++V++
Sbjct: 248 ERPYWEMSN----QDVIK 261
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 85.3 bits (212), Expect = 1e-18
Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 66/264 (25%)
Query: 90 YDKD---FDRRY-TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
+ +D R + + LG GQFG ++ + +VAVK +++ +
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHT-KVAVKSLKQGSM----------- 50
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
+ + E +++ L H+ +V+ Y + +YI E E G L+D
Sbjct: 51 -----SPDAFLAEANLMKQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVD------- 96
Query: 206 SRY--TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKAT 256
+ T + + ++L +AA+ + +HRD++ N L + S K
Sbjct: 97 --FLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIA 151
Query: 257 DFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY- 303
DFGL+ + I + Y APE + +SDVWS G++
Sbjct: 152 DFGLA---------RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 304 ILLCGRRPFWDKTEDGIFKEVLRN 327
I+ GR P+ T + + + R
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERG 226
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 81.4 bits (202), Expect = 1e-18
Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 15/145 (10%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 472
+ + + F D G I + L + + + EI + VD
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDM 56
Query: 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 526
+F+ + + + F+ FD D G I ELR G K S
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEE-FV--KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 113
Query: 527 IDPLLEEADIDKDGRISLSEFRRLL 551
+D LL+ + DG ++ +F +++
Sbjct: 114 MDELLKGVPVK-DGMVNYHDFVQMI 137
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 8e-08
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+ + F D D G I + E+R L L KL + E+L+ + DG+V
Sbjct: 71 MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPVK-DGMV 128
Query: 471 DFSEFV 476
++ +FV
Sbjct: 129 NYHDFV 134
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 53/264 (20%), Positives = 98/264 (37%), Gaps = 60/264 (22%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILP 149
++T+G++LG G+FG + +VAVK ++ + +++ D++ L
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD-----IIASSDIEEFL- 73
Query: 150 IAVEDVKREVKILQALAGHENVVKFY------NAFEDDNYVYIAMELCEGGELLDRILAK 203
RE ++ H +V K A + + + G+L +
Sbjct: 74 -------REAACMKEF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--- 122
Query: 204 KDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKAT 256
SR E + ++ ++R + +L +HRD+ N + ED ++
Sbjct: 123 LASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM---LAEDMTVCVA 179
Query: 257 DFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY 303
DFGLS + I YY A E L SDVW+ GV +
Sbjct: 180 DFGLS---------RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMW 230
Query: 304 -ILLCGRRPFWDKTEDGIFKEVLR 326
I+ G+ P+ I+ ++
Sbjct: 231 EIMTRGQTPYAGIENAEIYNYLIG 254
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 57/241 (23%), Positives = 91/241 (37%), Gaps = 59/241 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+G+ +G GQFG + + + VA+K + E
Sbjct: 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--------------DSVREKF 63
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+E ++ H ++VK ++ V+I MELC GEL + +K S +
Sbjct: 64 LQEALTMRQFD-HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS--------L 113
Query: 216 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
+ ++ A + +L VHRD+ N L + +K DFGLS
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVL---VSSNDCVKLGDFGLS------- 163
Query: 269 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 315
+ + S YY APE + R+ SDVW GV + IL+ G +PF
Sbjct: 164 --RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221
Query: 316 T 316
Sbjct: 222 K 222
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 85.4 bits (212), Expect = 3e-18
Identities = 70/304 (23%), Positives = 111/304 (36%), Gaps = 73/304 (24%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHG 107
H+++++ + QL+ Q ++ V ++ YD F R GK+LG G
Sbjct: 1 HKYKKQFRYESQLQMVQVTGSSDNEYFYVDF----REYEYDLKWEFPRENLEFGKVLGSG 56
Query: 108 QFGYTYVAT----DKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
FG AT K +VAVK +++ + + + E+K++
Sbjct: 57 AFGKVMNATAYGISKTGVSIQVAVKMLKEK------ADSSERE--------ALMSELKMM 102
Query: 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD--------------RILAKKDSRY 208
L HEN+V A +Y+ E C G+LL+ +K
Sbjct: 103 TQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162
Query: 209 TEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
E + +L A + L VHRD+ N L +K DFGL+
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL---VTHGKVVKICDFGLA 219
Query: 262 DFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLC 307
+DI+ + YV APE L +SDVWS G++ + I
Sbjct: 220 ---------RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270
Query: 308 GRRP 311
G P
Sbjct: 271 GVNP 274
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-18
Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 18/148 (12%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
+E++ + + + G IS++ K L +I +
Sbjct: 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELY----GDN 63
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 526
+ + +++ + + D+ + L F FD + G++T +++ G +
Sbjct: 64 LTYEQYL--EYLSICVHDKDNVEE-LI--KMFAHFDNNCTGYLTKSQMKNILTTWGDALT 118
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
L + I F +
Sbjct: 119 DQEAIDALNAF--SSEDNIDYKLFCEDI 144
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-07
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D+ E +L F D + G ++ +M+ L L + ++ L A ++ +
Sbjct: 81 DNVE--ELIKMFAHFDNNCTGYLTKSQMKNILTT-WGDALTDQEAIDALNAFS--SEDNI 135
Query: 471 DFSEFVAATLH 481
D+ F L
Sbjct: 136 DYKLFCEDILQ 146
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 3e-18
Identities = 61/248 (24%), Positives = 93/248 (37%), Gaps = 54/248 (21%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
F++R+ + LG G FG Y G++VAVK ++
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--------------G 63
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDS 206
+ D+K+E++IL+ L HEN+VK+ +D + + ME G L + L K +
Sbjct: 64 GNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY-LPKNKN 121
Query: 207 RYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+ K Q + VHRD+ N L + + +K DFGL+
Sbjct: 122 KINLKQQLKYAVQ---ICKGMDYLGSRQYVHRDLAARNVL---VESEHQVKIGDFGLTKA 175
Query: 264 IKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGR 309
I+ K+ YY APE L K SDVWS GV + +L
Sbjct: 176 IETDKE--------YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227
Query: 310 RPFWDKTE 317
Sbjct: 228 SDSSPMAL 235
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 4e-18
Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 62/269 (23%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD---RVAVKKIEKNKILIRVVSFQDLK 145
R R +GK LG G FG +A DK + +VAVK ++ + + +DL
Sbjct: 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD------ATEKDL- 118
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------- 198
D+ E+++++ + H+N++ A D +Y+ +E G L +
Sbjct: 119 -------SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRP 171
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFKSAKEDS 251
L + + + + ++ A + +L +HRD+ N L ED+
Sbjct: 172 PGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDN 228
Query: 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSI 298
+K DFGL+ +DI YY APE L R +SDVWS
Sbjct: 229 VMKIADFGLA---------RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 299 GVITY-ILLCGRRPFWDKTEDGIFKEVLR 326
GV+ + I G P+ + +FK +
Sbjct: 280 GVLLWEIFTLGGSPYPGVPVEELFKLLKE 308
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207 | Back alignment and structure |
|---|
Score = 81.9 bits (202), Expect = 5e-18
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 30/179 (16%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
L + L L +EEL F + G I+ ++ + AK P ++
Sbjct: 14 GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ ++ D N DG +DF E+V A + + +W AF +D+D +G I+
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEW------AFSLYDVDGNGTIS 125
Query: 514 PEELR--------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
E+ + + + + + D +++ EF
Sbjct: 126 KNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 58/296 (19%), Positives = 108/296 (36%), Gaps = 64/296 (21%)
Query: 63 LKTKQHQKTNSRRQTGVIPCGKRTDFGYDKD--FDR-RYTIGKLLGHGQFGYTY--VATD 117
+ + H +S +G++P G +D DR +GK+LG G+FG
Sbjct: 1 MGSSHHHHHHS---SGLVPRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQ 57
Query: 118 KANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY- 175
+ +VAVK ++ + R +E+ E ++ H NV++
Sbjct: 58 EDGTSLKVAVKTMKLDNSSQR-------------EIEEFLSEAACMKDF-SHPNVIRLLG 103
Query: 176 ----NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE----- 226
+ + + + + G+L + SR + ++ +L+ +
Sbjct: 104 VCIEMSSQGIPKPMVILPFMKYGDLHTYL---LYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 227 CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---- 280
+L +HRD+ N + ++D ++ DFGLS + I YY
Sbjct: 161 EYLSNRNFLHRDLAARNCM---LRDDMTVCVADFGLS---------KKIYSGDYYRQGRI 208
Query: 281 --------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 326
A E L R +SDVW+ GV + I G P+ ++ +L
Sbjct: 209 AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 5e-18
Identities = 60/273 (21%), Positives = 102/273 (37%), Gaps = 70/273 (25%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT-------DKANGDRVAVKKIEKNKILIRVVSFQDLK 145
F R + T+GK LG G FG +A VAVK ++ + + +DL
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD------ATEKDL- 84
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------- 198
D+ E+++++ + H+N++ A D +Y+ +E G L +
Sbjct: 85 -------SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 199 RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDS 251
+ + + + ++ + +L +HRD+ N L E++
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENN 194
Query: 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSI 298
+K DFGL+ +DI YY APE L R +SDVWS
Sbjct: 195 VMKIADFGLA---------RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 299 GV-----ITYILLCGRRPFWDKTEDGIFKEVLR 326
GV T G P+ + +FK +
Sbjct: 246 GVLMWEIFTL----GGSPYPGIPVEELFKLLKE 274
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 83.4 bits (207), Expect = 6e-18
Identities = 56/237 (23%), Positives = 83/237 (35%), Gaps = 51/237 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ ++LG G FG Y + VAVK +K+ E
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--------------TLDNKEKF 60
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
E I++ L H ++VK E++ +I MEL GEL L + + +
Sbjct: 61 MSEAVIMKNLD-HPHIVKLIGIIEEEP-TWIIMELYPYGELGHY-LERNKNSLKVLTLVL 117
Query: 216 VVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
Q + VHRD+ N L +K DFGLS +
Sbjct: 118 YSLQ---ICKAMAYLESINCVHRDIAVRNIL---VASPECVKLGDFGLS---------RY 162
Query: 273 IVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
I YY +PE + R+ SDVW V + IL G++PF+
Sbjct: 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 50/238 (21%), Positives = 85/238 (35%), Gaps = 51/238 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
K+LG G FG Y G++ VA+K++ + P A ++
Sbjct: 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--------------TSPKANKE 63
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+ E ++ ++ + +V + V + +L G LLD + + +
Sbjct: 64 ILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLLDY-VREHKDNIGSQYLL 120
Query: 215 VVVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
Q +A + LVHRD+ N L K +K TDFGL+ +
Sbjct: 121 NWCVQ---IAKGMNYLEDRRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGA----- 169
Query: 272 DIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
Y A E + R +SDVWS GV + ++ G +P+
Sbjct: 170 ---EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 6e-18
Identities = 57/249 (22%), Positives = 95/249 (38%), Gaps = 59/249 (23%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+G+ +G GQFG + + + VA+K + E
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS--------------DSVREKF 438
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
+E ++ H ++VK ++ V+I MELC GEL + +K S +
Sbjct: 439 LQEALTMRQF-DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFS--------L 488
Query: 216 VVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
+ ++ A + +L VHRD+ N L + +K DFGLS +++
Sbjct: 489 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVL---VSSNDCVKLGDFGLSRYME--- 542
Query: 269 KFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 315
S YY APE + R+ SDVW GV + IL+ G +PF
Sbjct: 543 ------DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596
Query: 316 TEDGIFKEV 324
+ + +
Sbjct: 597 KNNDVIGRI 605
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 6e-18
Identities = 64/273 (23%), Positives = 95/273 (34%), Gaps = 66/273 (24%)
Query: 94 FDRRY-TIGKLLGHGQFG----YTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
F +RY + LG G FG Y Y T+ G+ VAVK ++ +
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--------------G 73
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDS 206
P K+E+ IL+ L HE+++K+ ED + + ME G L D +
Sbjct: 74 PQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRH 129
Query: 207 RYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+ +Q + H +HRD+ N L D +K DFGL+
Sbjct: 130 SIGLAQLLLFAQQ---ICEGMAYLHAQHYIHRDLAARNVL---LDNDRLVKIGDFGLAKA 183
Query: 264 IKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGR 309
+ G + YY APE LK K SDVWS GV Y +L
Sbjct: 184 VPEGHE--------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 235
Query: 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 342
T+ + ++
Sbjct: 236 SSQSPPTKFLELIGI----------AQGQMTVL 258
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 7e-18
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 19/118 (16%)
Query: 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 505
LK + + L A+ +G + +F A + + + +D ++ F+ D
Sbjct: 3 AKDLLKADDIKKALDAVK--AEGSFNHKKFFA-LVGLKAMSAND-----VK--KVFKAID 52
Query: 506 IDRDGFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 554
D GFI EEL+ G + L+ AD D DG+I + EF L+ A
Sbjct: 53 ADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 9e-11
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 460
+ D++ F AID D +G I EE++ L L ++ L+
Sbjct: 31 FALVGLKAMSAN--DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88
Query: 461 AIDCNTDGLVDFSEFVA 477
A D + DG + EF
Sbjct: 89 AADKDGDGKIGIDEFET 105
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 9e-18
Identities = 72/341 (21%), Positives = 125/341 (36%), Gaps = 69/341 (20%)
Query: 24 HHRNANKEEAKR---RHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVI 80
HH ++ A + R T ++ T+ ++ GV
Sbjct: 7 HHHHSQDPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVS 66
Query: 81 PCGKRTDFGYDK-DFDR-RYTIGKLLGHGQFGYTYVAT----DKANGD---RVAVKKIEK 131
D K +F R + T+GK LG G FG +A DK VAVK ++
Sbjct: 67 EYELPED---PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD 123
Query: 132 NKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 191
+ + +DL D+ E+++++ + H+N++ A D +Y+ +E
Sbjct: 124 D------ATEKDL--------SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 192 EGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDM 237
G L + + + + + ++ + +L +HRD+
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDL 229
Query: 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVL 285
N L E++ +K DFGL+ +DI YY APE L
Sbjct: 230 AARNVL---VTENNVMKIADFGLA---------RDINNIDYYKKTTNGRLPVKWMAPEAL 277
Query: 286 K-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
R +SDVWS GV+ + I G P+ + +FK +
Sbjct: 278 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190 | Back alignment and structure |
|---|
Score = 80.3 bits (198), Expect = 1e-17
Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 28/179 (15%)
Query: 394 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
K S+L + L L + D E+ F +G ++ E+ + + P+
Sbjct: 4 KTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSP 61
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E + D + +G + F EF+ + + + AFE +D++ DG+
Sbjct: 62 EDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE------KLSWAFELYDLNHDGY 115
Query: 512 ITPEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
IT +E+ + + + + D ++DG I+L EFR +
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 1e-17
Identities = 66/329 (20%), Positives = 110/329 (33%), Gaps = 102/329 (31%)
Query: 99 TIGKLLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ +L+G G++G Y K + VAVK SF + + +
Sbjct: 16 KLLELIGRGRYGAVY----KGSLDERPVAVKVF----------SFANRQ--------NFI 53
Query: 157 REVKILQ-ALAGHENVVKFYNAFEDDNYV-----YIAMELCEGGELLDRILAKKDSRYTE 210
E I + L H+N+ +F E + ME G L +
Sbjct: 54 NEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL---------- 103
Query: 211 KDAAVVVRQMLRVAAE-----CHLH-----------GLVHRDMKPENFLFKSAKEDSSLK 254
R+A +LH + HRD+ N L K D +
Sbjct: 104 SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCV 160
Query: 255 ATDFGLSDFIKPGKKFQD---------IVGSAYYVAPEVLK--------RKSGPESDVWS 297
+DFGLS + + + VG+ Y+APEVL+ + + D+++
Sbjct: 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA 220
Query: 298 IGVITYILLCG-------------RRPFWDK-----TEDGIFKEVLRNK--PDFRRKPWP 337
+G+I + + + F + T + + V R K P F W
Sbjct: 221 LGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA-WK 279
Query: 338 SISNSAKDFVKKLLVK----DPRARLTAA 362
S + + K+ + D ARLTA
Sbjct: 280 ENSLAVRSL-KETIEDCWDQDAEARLTAQ 307
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 2e-17
Identities = 62/302 (20%), Positives = 103/302 (34%), Gaps = 76/302 (25%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQ 108
H H H + N Q+ P GK D ++ +GK +G G
Sbjct: 2 HHHHHHSSGVDLG--------TENLYFQSMPFPEGKVLDDM----EGNQWVLGKKIGSGG 49
Query: 109 FGYTYVATDKANGDRVAVK--KIE--KNKILIRVVSFQDLKMILPIAVEDVKREVKILQA 164
FG Y+A ++ A K+E +N L E+K Q
Sbjct: 50 FGLIYLAFPTNKPEKDARHVVKVEYQENGPL--------------------FSELKFYQR 89
Query: 165 LAGHENVVKFYN------------------AFEDDNYVYIAMELCEGGELLDRILAKKDS 206
+A + + K+ F+ +Y ++ ME G L +I ++
Sbjct: 90 VAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKIS-GQNG 146
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+ + + +ML V H + VH D+K N L K + D+GLS P
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL-GYKNPDQVYLADYGLSYRYCP 205
Query: 267 GKKFQDI--------VGSAYYVAPEVLKRKSGPE----SDVWSIG-VITYILLCGRRPFW 313
+ G+ + + + K G SDV +G + LCG+ P W
Sbjct: 206 NGNHKQYQENPRKGHNGTIEFTSLDAHK---GVALSRRSDVEILGYCMLR-WLCGKLP-W 260
Query: 314 DK 315
++
Sbjct: 261 EQ 262
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 55/251 (21%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMI 147
R + T+ + LG G FG Y VA + RVA+K + + S ++
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA------ASMRER--- 72
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-DS 206
+ E +++ +VV+ + MEL G+L + + +
Sbjct: 73 -----IEFLNEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAM 126
Query: 207 RYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFG 259
A + +M+++A E +L + VHRD+ N + ED ++K DFG
Sbjct: 127 ANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFG 183
Query: 260 LSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-IL 305
++ +DI + YY +PE LK SDVWS GV+ + I
Sbjct: 184 MT---------RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 306 LCGRRPFWDKT 316
+P+ +
Sbjct: 235 TLAEQPYQGLS 245
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-17
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 19/113 (16%)
Query: 449 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 508
L ++ V L+A + ++ F A + + + AF D D+
Sbjct: 6 ILADADVAAALKACE--AADSFNYKAFFAKVGLTAKSADDIKK--------AFFVIDQDK 55
Query: 509 DGFITPEELR--MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 552
GFI +EL+ + G+ L+ D D DG I + E+ L++
Sbjct: 56 SGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 5e-11
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 464
L + D++ F ID DK+G I +E++ L L ++ L+A D
Sbjct: 33 KVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDS 92
Query: 465 NTDGLVDFSEFVA 477
+ DG + E+ A
Sbjct: 93 DGDGAIGVDEWAA 105
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183 | Back alignment and structure |
|---|
Score = 79.5 bits (196), Expect = 2e-17
Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 26/161 (16%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
EL L F +G ++ E +Q A+ P + + A D G
Sbjct: 15 FTKRELQVLYRGFKNEX--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 519
V F +FV A + + H+ +W F +DI++DG+I EE+
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 126
Query: 520 --------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ +D ++ D +KDG ++L EF +
Sbjct: 127 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ 167
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 3e-17
Identities = 47/242 (19%), Positives = 86/242 (35%), Gaps = 59/242 (24%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
K+LG G FG + G+ V +K IE + +
Sbjct: 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--------------GRQSFQA 61
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
V + + +L H ++V+ + + + + G LLD + + +
Sbjct: 62 VTDHMLAIGSLD-HAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRGA-------- 111
Query: 215 VVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + +L + +L HG+VHR++ N L K S ++ DFG++D + P
Sbjct: 112 LGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVL---LKSPSQVQVADFGVADLLPP- 167
Query: 268 KKFQDIVGSAYYV-----------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWD 314
+ A E + K +SDVWS GV + ++ G P+
Sbjct: 168 -------DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220
Query: 315 KT 316
Sbjct: 221 LR 222
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 3e-17
Identities = 59/256 (23%), Positives = 95/256 (37%), Gaps = 61/256 (23%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMI 147
R + LG G FG + + VAVK LK
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA---------------LKEA 82
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD------RIL 201
A +D +RE ++L L H+++V+F+ + + + E G+L
Sbjct: 83 SESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDA 141
Query: 202 AKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSLK 254
+ + Q+L VA++ +L VHRD+ N L + +K
Sbjct: 142 KLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVK 198
Query: 255 ATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGVI 301
DFG+S +DI + YY PE + RK ESDVWS GV+
Sbjct: 199 IGDFGMS---------RDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 302 TY-ILLCGRRPFWDKT 316
+ I G++P++ +
Sbjct: 250 LWEIFTYGKQPWYQLS 265
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 81.5 bits (202), Expect = 3e-17
Identities = 54/259 (20%), Positives = 92/259 (35%), Gaps = 55/259 (21%)
Query: 90 YDKDFDRRY-TIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLK 145
+++G G FG Y T N + AVK + + +
Sbjct: 18 VVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI------TDIGE-- 69
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKK 204
V E I++ H NV+ + + + + G+L + + +
Sbjct: 70 ------VSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNE 121
Query: 205 DSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
T KD ++ L+VA +L VHRD+ N + E ++K DFGL+
Sbjct: 122 THNPTVKD---LIGFGLQVAKGMKYLASKKFVHRDLAARNCM---LDEKFTVKVADFGLA 175
Query: 262 DFIKPGKKFQDIVGSAYYV--------------APEVLK-RKSGPESDVWSIGVITY-IL 305
+D+ YY A E L+ +K +SDVWS GV+ + ++
Sbjct: 176 ---------RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
Query: 306 LCGRRPFWDKTEDGIFKEV 324
G P+ D I +
Sbjct: 227 TRGAPPYPDVNTFDITVYL 245
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 5e-17
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 18/106 (16%)
Query: 457 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+I A+ C ++ F + + + ++ F D D+ GFI E
Sbjct: 11 DIESALSSCQAADSFNYKSFFSTVGLSSKTPDQ------IK--KVFGILDQDKSGFIEEE 62
Query: 516 ELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 552
EL+ + L D D DG+I + EF+ L++
Sbjct: 63 ELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-11
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 464
L + ++ F +D DK+G I EE++ L L + L A D
Sbjct: 33 TVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDT 92
Query: 465 NTDGLVDFSEFVA 477
+ DG + EF +
Sbjct: 93 DGDGKIGVEEFQS 105
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 5e-17
Identities = 53/238 (22%), Positives = 83/238 (34%), Gaps = 51/238 (21%)
Query: 99 TIGKL-LGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
I + LG G FG + + VA+K +++ E++
Sbjct: 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--------------KADTEEM 57
Query: 156 KREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 215
RE +I+ L + +V+ + + ME+ GG L L K +
Sbjct: 58 MREAQIMHQLD-NPYIVRLI-GVCQAEALMLVMEMAGGGPLHKF-LVGKREEIPVSN--- 111
Query: 216 VVRQMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
V + +V+ VHRD+ N L K +DFGLS +
Sbjct: 112 VAELLHQVSMGMKYLEEKNFVHRDLAARNVL---LVNRHYAKISDFGLSKALG------- 161
Query: 273 IVGSAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
+YY APE + RK SDVWS GV + L G++P+
Sbjct: 162 -ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 51/235 (21%), Positives = 84/235 (35%), Gaps = 50/235 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE 158
K LG G FG + VAVK ++ P +++ E
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE-------------ANDPALKDELLAE 68
Query: 159 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 218
++Q L + +V+ + + ME+ E G L + +++ +K+ +V
Sbjct: 69 ANVMQQLD-NPYIVRMI-GICEAESWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVH 124
Query: 219 QMLRVAAECH---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
Q V+ VHRD+ N L K +DFGLS ++
Sbjct: 125 Q---VSMGMKYLEESNFVHRDLAARNVL---LVTQHYAKISDFGLSKALR--------AD 170
Query: 276 SAYYV------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
YY APE + K +SDVWS GV+ + G++P+
Sbjct: 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 62/257 (24%)
Query: 94 FDRRY-TIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
RR + + LG G FG ++A + VAVK LK
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKA---------------LKDP 56
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RI 200
A +D +RE ++L L HE++VKFY D + + + E + G+L
Sbjct: 57 TLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDA 115
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSL 253
+ D + + + + QML +A++ +L VHRD+ N L + +
Sbjct: 116 MILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL---VGANLLV 172
Query: 254 KATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV 300
K DFG+S +D+ + YY PE + RK ESDVWS GV
Sbjct: 173 KIGDFGMS---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 223
Query: 301 ITY-ILLCGRRPFWDKT 316
I + I G++P++ +
Sbjct: 224 ILWEIFTYGKQPWFQLS 240
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 2e-16
Identities = 60/339 (17%), Positives = 106/339 (31%), Gaps = 57/339 (16%)
Query: 11 SGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQERAKNYQQLKTKQHQK 70
G ++++ R + + + K + Q
Sbjct: 3 PIDPMGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGAN 62
Query: 71 TNSRRQTGVIPCGKRTDFGYDKDFDRRY-TIGKLLGHGQFGYTY--VATDKANGD-RVAV 126
T + + P + +++G G FG Y D AV
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122
Query: 127 KKIEKNKILIRVVSFQDLKMILPI-AVEDVKREVKILQALAGHENVVKFYNA-FEDDNYV 184
K L I I V E I++ + H NV+ +
Sbjct: 123 KS---------------LNRITDIGEVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSP 166
Query: 185 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPEN 241
+ + + G+L + + + T KD ++ L+VA L VHRD+ N
Sbjct: 167 LVVLPYMKHGDLRN-FIRNETHNPTVKD---LIGFGLQVAKGMKFLASKKFVHRDLAARN 222
Query: 242 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------------APEVLK- 286
+ E ++K DFGL+ +D+ + A E L+
Sbjct: 223 CM---LDEKFTVKVADFGLA---------RDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 287 RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 324
+K +SDVWS GV+ + ++ G P+ D I +
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 2e-16
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 12/111 (10%)
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E +L T + + + + +++ + L F
Sbjct: 2 EPTEKSMLLETTSTTKMETKYEDML--PVMAEKMDVEEFVS-ELC--KGFSLLADPERHL 56
Query: 512 ITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLRTAS 555
IT E LR ++G+ G ++ E D+D DG ++ +EF L+ S
Sbjct: 57 ITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 3e-08
Identities = 14/83 (16%), Positives = 35/83 (42%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+E +++L F + + I+ E +R+ + + +++ D + DG +
Sbjct: 35 VEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGAL 94
Query: 471 DFSEFVAATLHVHQLEEHDSEKW 493
+ +EF + + D+E W
Sbjct: 95 NQTEFCVLMVRLSPEMMEDAETW 117
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 2e-16
Identities = 56/251 (22%), Positives = 95/251 (37%), Gaps = 54/251 (21%)
Query: 99 TIGKLLGHGQFGYTY--VATDKANGD-RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+++G G FG Y D+A + A+K + + Q VE
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI------TEMQQ--------VEAF 69
Query: 156 KREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
RE +++ L H NV+ + ++ + G+LL + T KD
Sbjct: 70 LREGLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQ-FIRSPQRNPTVKD-- 125
Query: 215 VVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
++ L+VA +L VHRD+ N + E ++K DFGL+ +
Sbjct: 126 -LISFGLQVARGMEYLAEQKFVHRDLAARNCM---LDESFTVKVADFGLA---------R 172
Query: 272 DIVGSAYYV--------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDK 315
DI+ YY A E L+ + +SDVWS GV+ + +L G P+
Sbjct: 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232
Query: 316 TEDGIFKEVLR 326
+ + +
Sbjct: 233 DPFDLTHFLAQ 243
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 2e-16
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 398 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE 457
+ L + D EELA LR F A D +++G + EE R + L ++ +
Sbjct: 9 SGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEA 65
Query: 458 ILQAIDCNTDGLVDFSEFVA 477
+ Q +D + DG + F EF
Sbjct: 66 VFQRLDADRDGAITFQEFAR 85
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-11
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS-IDPLLEEA 534
L+ + E LR + F D +R G + EE R ++ + + + +
Sbjct: 13 NLYFQGADGDGEELARLR--SVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRL 70
Query: 535 DIDKDGRISLSEFRRLLRTA 554
D D+DG I+ EF R +
Sbjct: 71 DADRDGAITFQEFARGFLGS 90
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 75.5 bits (186), Expect = 3e-16
Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAIDC 464
EE+ R F + + +S E+ L K + + + + ++ +D
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVMDS 58
Query: 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----M 519
+T G + F EF ++ + QA +++FD+DR G I EL
Sbjct: 59 DTTGKLGFEEFKYLWNNIKKW------------QAIYKQFDVDRSGTIGSSELPGAFEAA 106
Query: 520 HTGLKGSIDPLLEEADIDKDGRISLSEF 547
L + ++ D+ G + F
Sbjct: 107 GFHLNEHLYSMIIRRYSDEGGNMDFDNF 134
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 32/148 (21%)
Query: 384 SVLNNMRQFVKYSRLKQFALRALAS-----------TLDDEE-------LADLRDQFDAI 425
++LN + + F + S L EE + + +
Sbjct: 27 NILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQF 86
Query: 426 DVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485
DVD++G+I E+ A + + L E + ++ + G +DF F++ + + +
Sbjct: 87 DVDRSGTIGSSELPGAF-EAAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAM 144
Query: 486 EEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
AF+ D D G I
Sbjct: 145 FR------------AFKSLDKDGTGQIQ 160
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 5e-16
Identities = 48/257 (18%), Positives = 87/257 (33%), Gaps = 61/257 (23%)
Query: 94 FDRRY-TIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMI 147
+ LG +FG Y A G+ VA+K ++
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK------AEGPLR--- 56
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD-------RI 200
E+ + E + L H NVV D + + C G+L +
Sbjct: 57 -----EEFRHEAMLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 110
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFKSAKEDSSL 253
+A+ + + A+ +L H +VH+D+ N L + ++
Sbjct: 111 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL---VYDKLNV 167
Query: 254 KATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPESDVWSIGV 300
K +D GL +++ + YY APE + K +SD+WS GV
Sbjct: 168 KISDLGLF---------REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGV 218
Query: 301 ITY-ILLCGRRPFWDKT 316
+ + + G +P+ +
Sbjct: 219 VLWEVFSYGLQPYCGYS 235
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 9e-16
Identities = 62/248 (25%), Positives = 92/248 (37%), Gaps = 68/248 (27%)
Query: 94 FDR-RYTIGKLLGHGQFGYTYVAT----DKANGD-RVAVKKIEKNKILIRVVSFQDLKMI 147
F R +GK LG G+FG AT G VAVK +++N S +L+
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN------ASPSELR-- 71
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD--------- 198
D+ E +L+ + H +V+K Y A D + + +E + G L
Sbjct: 72 ------DLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 199 ------RILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDMKPENFLFK 245
S + A+ + ++ A + +L LVHRD+ N L
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNIL-- 182
Query: 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPE 292
E +K +DFGLS +D+ YV A E L +
Sbjct: 183 -VAEGRKMKISDFGLS---------RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ 232
Query: 293 SDVWSIGV 300
SDVWS GV
Sbjct: 233 SDVWSFGV 240
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 3e-15
Identities = 63/340 (18%), Positives = 100/340 (29%), Gaps = 64/340 (18%)
Query: 10 VSGSNSGSNNNNANHHRNANKEEAKRRHNHHARNDTTHKHQHQHQER--AKNYQQLKTKQ 67
V ++ A A H H +R T +
Sbjct: 236 VEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPE 295
Query: 68 HQKTNSRRQTGVIPCGKRTDFGYDKDF------------DRRYTIGKLLGHGQFGYTYVA 115
+ S + +P D D LG G FG
Sbjct: 296 PARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQG 355
Query: 116 TDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173
+ + VA+K +++ E++ RE +I+ L + +V+
Sbjct: 356 VYRMRKKQIDVAIKVLKQGTE--------------KADTEEMMREAQIMHQL-DNPYIVR 400
Query: 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LH 230
+ + ME+ GG L L K + A ++ Q V+
Sbjct: 401 LI-GVCQAEALMLVMEMAGGGPLHKF-LVGKREEIPVSNVAELLHQ---VSMGMKYLEEK 455
Query: 231 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---------- 280
VHR++ N L K +DFGLS + +YY
Sbjct: 456 NFVHRNLAARNVL---LVNRHYAKISDFGLSKALG--------ADDSYYTARSAGKWPLK 504
Query: 281 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
APE + RK SDVWS GV + L G++P+
Sbjct: 505 WYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 3e-15
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 464
S L + ++D F ID D++G + +E++ L K +L ES ++ A D
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91
Query: 465 NTDGLVDFSEFVA 477
+ DG + EF
Sbjct: 92 DGDGKIGADEFQE 104
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 5e-13
Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 18/107 (16%)
Query: 457 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+I A+ C + +F + S+ + + F D D+ G++ +
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 516 ELRM---HTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 553
EL+ L++ AD D DG+I EF+ ++ +
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 4e-15
Identities = 52/265 (19%), Positives = 91/265 (34%), Gaps = 69/265 (26%)
Query: 94 FDR-RYTIGKLLGHGQFGYTY--VATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMI 147
+ R + +G G FG + A + VAVK +++ S
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE------ASADMQA-- 95
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLD--------- 198
D +RE ++ + N+VK + + E G+L +
Sbjct: 96 ------DFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHT 148
Query: 199 ------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENFLFK 245
L+ + + + + L +A + +L VHRD+ N L
Sbjct: 149 VCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL-- 206
Query: 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPE 292
E+ +K DFGLS ++I + YY PE + + E
Sbjct: 207 -VGENMVVKIADFGLS---------RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE 256
Query: 293 SDVWSIGVITY-ILLCGRRPFWDKT 316
SDVW+ GV+ + I G +P++
Sbjct: 257 SDVWAYGVVLWEIFSYGLQPYYGMA 281
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 75.9 bits (187), Expect = 4e-15
Identities = 32/235 (13%), Positives = 64/235 (27%), Gaps = 34/235 (14%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKR-TDFGYDKDFDRRYTIGKLLGHG 107
H H H + T S +P G TD R++ +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSMTTSLEA---LPTGTVLTDK-----SGRQWKLKSFQTRD 53
Query: 108 QFGYTYVATDKANGD--------RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
G Y A + + ++K ++ + + P+ V K+
Sbjct: 54 NQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAAKPLQVNKWKKLY 112
Query: 160 KILQALAGHENVVKFY-NAFEDDNYVYIAMELCEGGELLDRILAKKDSR-YTEKDAAVVV 217
+ D Y ++ + G L L +E+ V
Sbjct: 113 ST-----PLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVA 165
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
++L H + VH ++ EN + S + +G + ++
Sbjct: 166 CRLLDALEFLHENEYVHGNVTAENIFVDPEDQ-SQVTLAGYGFA------FRYCP 213
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-14
Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 23/139 (16%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFS 473
L F ++ ++G I +E+++ L + ++ +D + G + F+
Sbjct: 4 LYGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 530
EF ++ + F FD DR G + P+EL+ G + +
Sbjct: 63 EFKELWAVLNGW------------RQHFISFDSDRSGTVDPQELQKALTTMGFRLN-PQT 109
Query: 531 LEE--ADIDKDGRISLSEF 547
+ G+I+ ++
Sbjct: 110 VNSIAKRYSTSGKITFDDY 128
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-10
Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 30/145 (20%)
Query: 384 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 428
L Y R + S T+ E L R F + D D
Sbjct: 25 RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSD 84
Query: 429 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488
++G++ +E+++AL + ++L V I + T G + F +++A + + L +
Sbjct: 85 RSGTVDPQELQKAL-TTMGFRLNPQTVNSIAKRYS--TSGKITFDDYIACCVKLRALTD- 140
Query: 489 DSEKWHLRSQAAFEKFDIDRDGFIT 513
+F + D + G +
Sbjct: 141 -----------SFRRRDSAQQGMVN 154
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Query: 498 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 546
F +DG I +EL+ +G+ G P ++ D D G + +E
Sbjct: 5 YGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 63
Query: 547 FRRL 550
F+ L
Sbjct: 64 FKEL 67
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 2e-14
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E+ ++++ FD D +K GSI E++ A+ L + +K+ +LE++ D +G
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGY 59
Query: 470 VDFSEFVAATLHVHQLEEHD 489
+ F +F+ + +++ D
Sbjct: 60 IGFDDFL--DIMTEKIKNRD 77
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEF 547
+ AF+ FD ++ G I EL+ M G I L+ E D + +G I +F
Sbjct: 10 KEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 2e-14
Identities = 44/251 (17%), Positives = 78/251 (31%), Gaps = 57/251 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ +G +G G FG Y+A + VK + P
Sbjct: 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVK-------------------VEPS 75
Query: 151 AVEDVKREVKILQALAGHENVVKFYNA------------------FEDDNYVYIAMELCE 192
+ E+K Q A E + K+ +Y ++ M+
Sbjct: 76 DNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF- 134
Query: 193 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252
G L +I R++ K + ++L + H H VH D+K N L + K
Sbjct: 135 -GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL-NYKNPDQ 192
Query: 253 LKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEV-LKRKSGPESDVWSIG-VIT 302
+ D+GL+ P + G+ + + + D+ +G +
Sbjct: 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMI 252
Query: 303 YILLCGRRPFW 313
L G P W
Sbjct: 253 Q-WLTGHLP-W 261
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-14
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 19/114 (16%)
Query: 449 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 508
L S + L+ DC +F + + E F D D+
Sbjct: 5 ILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSKKSSSQLKE--------IFRILDNDQ 54
Query: 509 DGFITPEELR--MHT-GLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 553
GFI +EL+ + L AD D DG+I EF+ ++++
Sbjct: 55 SGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-14
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Query: 382 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQA 441
+ +R ++ + + + L++ F +D D++G I +E++
Sbjct: 8 PSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66
Query: 442 LAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
L + L S L A D + DG + EF
Sbjct: 67 LQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 68.6 bits (168), Expect = 1e-13
Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 34/167 (20%)
Query: 410 LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 461
L +E+ +F +++ + E++ KE I +
Sbjct: 14 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELK-ANPFKE----RICRV 68
Query: 462 IDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 518
+ + F +F+ L V K H AF FD D DG + E+L
Sbjct: 69 FSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AFRIFDFDDDGTLNREDLSRL 123
Query: 519 ------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 552
+ S ID +LEE+DID+DG I+LSEF+ ++
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)
Query: 403 LRALASTLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQAL--------AKDLPWKLKES 453
L L+ D F D D +G+++ E++ + + L +
Sbjct: 84 LDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487
+ IL+ D + DG ++ SEF
Sbjct: 144 LIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 177
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 65.7 bits (161), Expect = 1e-13
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
+D + +L++ F D D+NG IS E+R + +L KL + V ++++ D + DG
Sbjct: 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 470 VDFSEFVAATLHVHQLEEHDSEK 492
V++ EFV + V +
Sbjct: 62 VNYEEFVKMMMTVRGGGGGNGWS 84
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 3e-11
Identities = 24/77 (31%), Positives = 49/77 (63%), Gaps = 10/77 (12%)
Query: 484 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADID 537
++ D+E+ L+ AF+ FD D++G+I+ ELR ++ G K + ++ +++EAD+D
Sbjct: 2 HMDT-DAEE-ELK--EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 57
Query: 538 KDGRISLSEFRRLLRTA 554
DG+++ EF +++ T
Sbjct: 58 GDGQVNYEEFVKMMMTV 74
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 1e-13
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 19/118 (16%)
Query: 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 505
+ L + + + A D +F + + D K F D
Sbjct: 2 MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQMV--GLKKKSADDVK------KVFHILD 51
Query: 506 IDRDGFITPEELR--MHT-GLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 554
D+ GFI +EL + L+ D D DG+I + EF L+ +
Sbjct: 52 KDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-13
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Query: 377 SEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLE 436
+++ + + F + L + D++ F +D DK+G I +
Sbjct: 3 TDLLSAEDIKKAIGAFTAADSFDHKKFFQMVG-LKKKSADDVKKVFHILDKDKSGFIEED 61
Query: 437 EMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
E+ L L ++ A D + DG + EF
Sbjct: 62 ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 2e-13
Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 23/154 (14%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAI 462
+ L F A ++G I +E+++ L + ++ +
Sbjct: 24 GPAFPGQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82
Query: 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM--- 519
D + G + F+EF ++ + F FD DR G + P+EL+
Sbjct: 83 DRDMSGTMGFNEFKELWAVLNGW------------RQHFISFDTDRSGTVDPQELQKALT 130
Query: 520 HTGLKGSIDPLLEE--ADIDKDGRISLSEFRRLL 551
G + S + +G+I+ ++
Sbjct: 131 TMGFRLS-PQAVNSIAKRYSTNGKITFDDYIACC 163
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-09
Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 30/145 (20%)
Query: 384 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 428
L Y R + S T+ E L R F + D D
Sbjct: 56 RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTD 115
Query: 429 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488
++G++ +E+++AL + ++L V I + T+G + F +++A + + L +
Sbjct: 116 RSGTVDPQELQKAL-TTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKLRALTD- 171
Query: 489 DSEKWHLRSQAAFEKFDIDRDGFIT 513
+F + D + G +
Sbjct: 172 -----------SFRRRDTAQQGVVN 185
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214 | Back alignment and structure |
|---|
Score = 68.3 bits (167), Expect = 3e-13
Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 38/185 (20%)
Query: 394 KYSRLKQFALRALAST--LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALA 443
SRL + L L +E+ +F +++ + E+
Sbjct: 27 SGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQ-----I 81
Query: 444 KDLPWKLKESRVLE-ILQAIDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 501
LP +LK + E I + + + F +F+ L V K H AF
Sbjct: 82 LSLP-ELKANPFKERICRVFSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AF 135
Query: 502 EKFDIDRDGFITPEELR--------MHTGLKGS-------IDPLLEEADIDKDGRISLSE 546
FD D DG + E+L + S ID +LEE+DID+DG I+LSE
Sbjct: 136 RIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 195
Query: 547 FRRLL 551
F+ ++
Sbjct: 196 FQHVI 200
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 1e-12
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
F IDV+ +G++S EE++ + E + I ++ID + +G +D +EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFV-SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 478 A 478
Sbjct: 61 F 61
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 3e-10
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 551
+A F++ D++ DG ++ EE++ K + + + + D D +G I +EF +
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 552 RT 553
+
Sbjct: 63 GS 64
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-05
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 402 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 443
+ + +++ L + F +ID D NG I E +
Sbjct: 25 FVSKKRAIKNEQLLQLI---FKSIDADGNGEIDQNEFAKFYG 63
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 23/139 (16%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEILQAIDCNTDGLVDFS 473
+ F A+ ++G + EE+++ L ++ +D + G + F+
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 530
F + W + F D D G + ELR G + S
Sbjct: 61 AFKELWAAL--------NAW----KENFMTVDQDGSGTVEHHELRQAIGLMGYRLS-PQT 107
Query: 531 LEE--ADIDKDGRISLSEF 547
L K+GRI ++
Sbjct: 108 LTTIVKRYSKNGRIFFDDY 126
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 8e-11
Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 30/145 (20%)
Query: 384 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 428
L YS R + + + L ++ F +D D
Sbjct: 23 RCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQD 82
Query: 429 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488
+G++ E+RQA+ + ++L + I++ +G + F ++VA + + L +
Sbjct: 83 GSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVKLRALTD- 138
Query: 489 DSEKWHLRSQAAFEKFDIDRDGFIT 513
F K D + G
Sbjct: 139 -----------FFRKRDHLQQGSAN 152
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 12/64 (18%)
Query: 498 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 546
F +DG + EEL+ +G+ G+ P ++ D D G++ +
Sbjct: 3 YTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA 61
Query: 547 FRRL 550
F+ L
Sbjct: 62 FKEL 65
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 62.1 bits (152), Expect = 1e-12
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 475
+ + F+ D +K+G +SL+E R+ + +++ + ID + +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 476 VA 477
+
Sbjct: 60 TS 61
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67 | Back alignment and structure |
|---|
Score = 56.7 bits (138), Expect = 9e-11
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 551
+ FEKFD ++DG ++ +E R + + I EE D+D +G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 552 R 552
Sbjct: 64 E 64
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 1e-12
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + L + + I++ +D + G
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 470 VDFSEFVA 477
+DF EF+
Sbjct: 73 IDFEEFLV 80
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 6e-09
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRL 550
+AAF+ FD D G I+ +EL M G + +D ++EE D D G I EF +
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 2e-12
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 399 KQFALRALASTLDD---EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 455
A R + + L + +F+ D K +IS EE R + L + +
Sbjct: 4 MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQF 62
Query: 456 LEILQAIDCNTDGLVDFSEFVAA 478
+ + N G + + +F++
Sbjct: 63 DRLWNEMPVNAKGRLKYPDFLSR 85
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 7e-10
Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 17/97 (17%)
Query: 476 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDP 529
+ A LH + S + FE FD + I+ EE R + D
Sbjct: 11 ILARLH----KAVTSHYHAIT--QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDR 64
Query: 530 LLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPS 566
L E ++ GR+ +F + SS +
Sbjct: 65 LWNEMPVNAKGRLKYPDF-----LSRFSSETAATPMA 96
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 69.5 bits (169), Expect = 2e-12
Identities = 96/636 (15%), Positives = 175/636 (27%), Gaps = 208/636 (32%)
Query: 37 HNHHARNDT-THKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFD 95
H+HH D T +HQ+Q+++ ++ F +FD
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFED------------------------AF--VDNFD 34
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL--PIAVE 153
K ++ + ++S +++ I+ AV
Sbjct: 35 ------------------------------CKDVQD--MPKSILSKEEIDHIIMSKDAVS 62
Query: 154 DVKREVKILQALAGHENVVK-FYNAFEDDNYVYIAMEL---CEGGELL-DRILAKKDSRY 208
R L L+ E +V+ F NY ++ + ++ + ++D Y
Sbjct: 63 GTLRLFWTL--LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 209 TEKDAAV---VVR-----------QMLRVAAECHLHGL-----------VHRDMKPE-NF 242
+ V R LR A + G+ V K +
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180
Query: 243 LFK--------SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-------LKR 287
FK ++ L+ L D + + LK
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 288 KSGPES-----DVWSIGVITY------ILLCGRRPFWDK--TEDGIFKEVLRNKPDFRRK 334
K +V + ILL R K T+ D
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR----FKQVTDFLSAATTTHISLDHHSM 296
Query: 335 PWPSISNSAKDFVKKLLVKD---PRARLTAAQALS-HPWVREGGDASEIPIDISVLNNMR 390
+ +K L + PR + L+ +P S I I
Sbjct: 297 TL-TPDEVKSLLLKYLDCRPQDLPR------EVLTTNPRR-----LSIIAESIRDGLATW 344
Query: 391 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPW- 448
K+ + + S+L+ E A+ R FD + V + I L+ L W
Sbjct: 345 DNWKHVNCDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT----ILLS--LIWF 397
Query: 449 KLKESRVLEILQAIDCNTDGLV--DFSEFVAATLHVHQLEE----------HDS------ 490
+ +S V+ ++ + LV E ++ LE H S
Sbjct: 398 DVIKSDVMVVVN--KLHKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 491 -----EKW-----------------HLRSQAAFEKFDIDRD-----GFITPEELRMHTGL 523
+ HL++ E+ + R F+ +++R H
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-QKIR-HDST 512
Query: 524 ----KGSIDPLLEEADIDKDGRISLSE--FRRLLRT 553
GSI L++ K I ++ + RL+
Sbjct: 513 AWNASGSILNTLQQLKFYKP-YICDNDPKYERLVNA 547
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 2e-12
Identities = 11/92 (11%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 389 MRQFVKYSRLKQFAL---RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 445
+Q + + + L + + +L ++++ D++ NG I + +++ L K
Sbjct: 2 AQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK- 60
Query: 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
L + +++ + + + +F+
Sbjct: 61 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-08
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 500 AFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 552
+ +FD++ +G I L+ + G+ + + L+ E S +F R++
Sbjct: 37 KYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 3e-12
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCN 465
A+ +++AD F D + +G IS E+ AL V ++ ID +
Sbjct: 2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSV---TPDEVRRMMAEIDTD 58
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSE 491
DG + F EF L + S+
Sbjct: 59 GDGFISFDEFTDFARANRGLVKDVSK 84
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 5e-09
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRL 550
+ F++FD + DG I+ EL LK + ++ E D D DG IS EF
Sbjct: 14 ERIFKRFDTNGDGKISSSELG--DALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 551 LRTASISSRNV 561
R ++V
Sbjct: 72 ARANRGLVKDV 82
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 4e-12
Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEILQAIDC 464
+ + A+L F +D + +G ++ E++ + L + ++++ D
Sbjct: 1 MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60
Query: 465 NTDGLVDFSEFVA 477
N+DG + EF+
Sbjct: 61 NSDGKISKEEFLN 73
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 3e-11
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
Query: 498 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---------IDPLLEEADIDKDGRISLS 545
+AAF+K D + DG++T EL+ M T + L++ AD + DG+IS
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 546 EFRRL 550
EF
Sbjct: 70 EFLNA 74
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 60.6 bits (148), Expect = 5e-12
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 472
L DL+ F A D D +G I+++E+R+A+ L L + + +++ D + DG V++
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNY 61
Query: 473 SEFVA 477
EF
Sbjct: 62 EEFAR 66
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
Score = 58.3 bits (142), Expect = 3e-11
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRI 542
+ L+ AF FD D DG IT +ELR G +D ++ EAD+D+DGR+
Sbjct: 3 AGLE-DLQ--VAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRV 59
Query: 543 SLSEFRRLLR 552
+ EF R+L
Sbjct: 60 NYEEFARMLA 69
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 9e-12
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 471 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS- 526
E + +++ DSE+ +R AF D D +G+I+ ELR + G K +
Sbjct: 11 SSGENLYFQSL---MKDTDSEE-EIR--EAFRVEDKDGNGYISAAELRHVMTNLGEKLTD 64
Query: 527 --IDPLLEEADIDKDGRISLSEFRRLL 551
+D ++ EADID DG+++ EF +++
Sbjct: 65 EEVDEMIREADIDGDGQVNYEEFVQMM 91
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-10
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
D + ++R+ F D D NG IS E+R + +L KL + V E+++ D + DG V
Sbjct: 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 471 DFSEFVA 477
++ EFV
Sbjct: 83 NYEEFVQ 89
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 5e-11
Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
+L + ++ D++ NG I + +++ L K L + +++ + ++
Sbjct: 42 DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSGSEET 100
Query: 470 VDFSEFVA 477
+S+F+
Sbjct: 101 FSYSDFLR 108
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 3e-09
Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 457 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 516
+ + ++ +D ++ +LE + + +FD++ +G I
Sbjct: 19 QQEERLEGINKQFLDDPKYSNDEDLPSKLEAF---------KVKYMEFDLNGNGDIDIMS 69
Query: 517 LR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 554
L+ + G+ + + L+ E + S S+F R++
Sbjct: 70 LKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 6e-11
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS----IDPLLEEADIDKD 539
D E+ + AF+ FD + DG I +E + G + ++ ++EAD D +
Sbjct: 3 RQDDEE-EIL--RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGN 59
Query: 540 GRISLSEFRRLLR 552
G I + EF L++
Sbjct: 60 GVIDIPEFMDLIK 72
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 8e-11
Identities = 14/68 (20%), Positives = 33/68 (48%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
+ ++ ++ F D + +G I +E + + K L ++ V E ++ D + +G+
Sbjct: 2 VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61
Query: 470 VDFSEFVA 477
+D EF+
Sbjct: 62 IDIPEFMD 69
|
| >1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 1e-10
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 471
EL + +++ A + D +S EE++Q + + P LK R L ++ Q +D N DG V
Sbjct: 7 AELKSIFEKYAAKEGDP-NQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 472 FSEFVA 477
F EF
Sbjct: 66 FEEFQV 71
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 2e-10
Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
E+L ++++ D++ G I L +++ + K L + +++ +
Sbjct: 44 NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDT 102
Query: 470 VDFSEFVA 477
+ + +FV
Sbjct: 103 ISYRDFVN 110
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150 | Back alignment and structure |
|---|
Score = 49.9 bits (119), Expect = 2e-07
Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDK 538
+E + + + + +FD++ +G I L+ M G+ + + ++ E
Sbjct: 40 SDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGV 99
Query: 539 DGRISLSEF 547
IS +F
Sbjct: 100 SDTISYRDF 108
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 3e-10
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 500 AFEKFDIDRDGFITPEELR--MHT---GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 554
F++FD + DG I+ EL + T + ++ E D D DG I +EF
Sbjct: 8 IFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67
Query: 555 SISSRNV 561
++V
Sbjct: 68 PGLMKDV 74
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-08
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 476
D+ F D + +G ISL E+ AL L + V ++ ID + DG +DF+EF+
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRT-LGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Query: 477 A 477
+
Sbjct: 62 S 62
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 7e-10
Identities = 43/205 (20%), Positives = 69/205 (33%), Gaps = 26/205 (12%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
YD F R R +GK LG G FG A I+K V K
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEAD---------AFGIDKTATCRTVAV----K 58
Query: 146 MILPIA----VEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRI 200
M+ A + E+KIL + H NVV A + + + +E C+ G L +
Sbjct: 59 MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
Query: 201 LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDF 258
+K++ K RQ + D + S+ E+ SL +
Sbjct: 119 RSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178
Query: 259 GLSDFIKPGKKF--QDIVGSAYYVA 281
+ + ++ ++ VA
Sbjct: 179 EEAPEDLYKDFLTLEHLICYSFQVA 203
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 3e-09
Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 51/189 (26%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + +G G FG + VA+K I + + E++
Sbjct: 21 KLQRCEKIGEGVFGEVFQTIAD--HTPVAIKII-------AIEGPDLVNGSHQKTFEEIL 71
Query: 157 REVKILQALAG--------HENVVKFYNAF------------------------------ 178
E+ I + L+ E + +
Sbjct: 72 PEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDF 131
Query: 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDM 237
D+ ++I +E GG L+++ K S A ++ Q+ A HRD+
Sbjct: 132 FKDDQLFIVLEFEFGGIDLEQMRTKLSS---LATAKSILHQLTASLAVAEASLRFEHRDL 188
Query: 238 KPENFLFKS 246
N L K
Sbjct: 189 HWGNVLLKK 197
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 5e-09
Identities = 65/255 (25%), Positives = 103/255 (40%), Gaps = 68/255 (26%)
Query: 92 KDFDRRYTIGK--LLGHGQFGYTYVATDKA--NGDRVAVKKIEKNKILIRVVSFQDLKMI 147
+FD R +G G FG Y K N VAVKK+ ++ + + + +
Sbjct: 25 NNFDERPISVGGNKMGEGGFGVVY----KGYVNNTTVAVKKL---AAMVDITTEELKQ-- 75
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYN-AFEDDNY--VYIAMELCEGGELLDRILAKK 204
+E+K++ HEN+V+ + + D+ VY G LLDR+
Sbjct: 76 ------QFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLVY---VYMPNGSLLDRLSCLD 125
Query: 205 DSRYTEKDAAVVVRQML----RV-----AAE--CHLH--GLVHRDMKPENFLFKSAKEDS 251
L R AA LH +HRD+K N L D
Sbjct: 126 G------------TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL-----DE 168
Query: 252 SLKA--TDFGLSDFIKPGKKFQD------IVGSAYYVAPEVLKRKSGPESDVWSIGVITY 303
+ A +DFGL+ + +KF IVG+ Y+APE L+ + P+SD++S GV+
Sbjct: 169 AFTAKISDFGLA---RASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLL 225
Query: 304 ILLCGRRPFWDKTED 318
++ G D+ +
Sbjct: 226 EIITGLPAV-DEHRE 239
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-08
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 471
EE+ + F A + IS EE++ + P LK L E+++ +D N DG V
Sbjct: 5 EEIKGAFEVFAAKE-GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63
Query: 472 FSEFVA 477
F EF+
Sbjct: 64 FEEFLV 69
|
| >1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-08
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 499 AAFEKFDIDRD--GFITPEELRM--------HTGLKGSIDPLLEEADIDKDGRISLSEFR 548
AFE F I+ EEL++ ++D ++EE D + DG +S EF
Sbjct: 9 GAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Query: 549 RLLRTAS 555
+++ S
Sbjct: 69 VMMKKIS 75
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ E A + F D D +G +S E+R+ K L + + I D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK---TGLPSTLLAHIWSLCDTKDCG 59
Query: 469 LVDFSEFVAA 478
+ +F A
Sbjct: 60 KLSKDQFALA 69
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-07
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 496 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 547
+ F K D D DGF++ E+R + TGL + + D G++S +F
Sbjct: 11 KYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF 66
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 4e-08
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ DE+ +QF I D NG I ++ K KL + I + D + DG
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58
Query: 469 LVDFSEFVAA 478
+ EF AA
Sbjct: 59 ALTLDEFCAA 68
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-06
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 496 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 547
F+ D +GFI + + L + + E +D DKDG ++L EF
Sbjct: 10 YYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEF 65
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 76/249 (30%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
+FD ++ L+GHG FG Y K +G +VA+K+ S Q
Sbjct: 39 NNFDHKF----LIGHGVFGKVY----KGVLRDGAKVALKRRTPE-------SSQ------ 77
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAFEDDNY---VYIAMELCEGGELLDRILAKKD 205
+E+ + E++ L H ++V ++ N +Y + E G L L D
Sbjct: 78 --GIEEFETEIETLSFCR-HPHLVSLIGFCDERNEMILIY---KYMENGNLKRH-LYGSD 130
Query: 206 SRYTEKDAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENFLFKSAKEDSSLKA--T 256
Q L + +LH ++HRD+K N L D + T
Sbjct: 131 LPTMSMSW----EQRLEICIGAARGLHYLHTRAIIHRDVKSINILL-----DENFVPKIT 181
Query: 257 DFGLSDFIKPGKKFQD---------IVGSAYYVAPEVLKR-----KSGPESDVWSIGVIT 302
DFG+S KK + + G+ Y+ PE + KS DV+S GV+
Sbjct: 182 DFGIS------KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKS----DVYSFGVVL 231
Query: 303 YILLCGRRP 311
+ +LC R
Sbjct: 232 FEVLCARSA 240
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 1e-07
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 53/231 (22%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162
+LG G FG Y A+G VAVK++++ + + FQ EV+++
Sbjct: 37 ILGRGGFGKVYKGR-LADGTLVAVKRLKEERTQGGELQFQ--------------TEVEMI 81
Query: 163 QALAGHENVVKFYNAFEDDNY---VYIAMELCEGGELLDRILAKKDSRY-----TEKDAA 214
++A H N+++ VY G + + + +S+ + A
Sbjct: 82 -SMAVHRNLLRLRGFCMTPTERLLVY---PYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 215 VVVRQMLRVAA--------ECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFI 264
+ +A C ++HRD+K N L D +A DFGL+ +
Sbjct: 138 LG-------SARGLAYLHDHCDPK-IIHRDVKAANILL-----DEEFEAVVGDFGLAKLM 184
Query: 265 KPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPF 312
+ G+ ++APE L KS ++DV+ GV+ L+ G+R F
Sbjct: 185 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 2e-07
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ +E+ +QF ++ D + IS + K KL + I + D + DG
Sbjct: 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK---SKLSIPELSYIWELSDADCDG 71
Query: 469 LVDFSEFVAA 478
+ EF AA
Sbjct: 72 ALTLPEFCAA 81
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-06
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 496 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 547
F D FI+ + + L + + E +D D DG ++L EF
Sbjct: 23 YYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEF 78
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 3e-07
Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 18/71 (25%)
Query: 500 AFEKFDIDRDGFITPEELR---MHTG---------------LKGSIDPLLEEADIDKDGR 541
F+ D D + + EL H L ID +L + D + DG
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 542 ISLSEFRRLLR 552
I +EF + L+
Sbjct: 133 IDYAEFAKSLQ 143
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 6e-05
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 13/87 (14%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL------ 456
+ + + +EL F D D N + E+ A+ + E L
Sbjct: 57 INKPEAEMSPQEL--QLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDEL 114
Query: 457 -----EILQAIDCNTDGLVDFSEFVAA 478
+L+ D N DG +D++EF +
Sbjct: 115 INIIDGVLRDDDKNNDGYIDYAEFAKS 141
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863 | Back alignment and structure |
|---|
Score = 52.2 bits (124), Expect = 3e-07
Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Query: 394 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
+ ++ L A + E++ + R F+ D K G + E+ R L + + + E+
Sbjct: 703 TINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI-SMGYNMGEA 761
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
I+ +D N G+V F F+ + + D+ + A+F+ D++ +IT
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFID--FMSRETADTDTAD---QVMASFKILAGDKN-YIT 815
Query: 514 PEELRMH 520
+ELR
Sbjct: 816 VDELRRE 822
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-07
Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 413 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+ L + D + ++ ++ +++++ L + P +++ + +D NTDG V
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 471 DFSEFV 476
+F EF+
Sbjct: 67 NFQEFL 72
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 4e-07
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ R F++ D +G ++ + R L + L ++++ I D + DG
Sbjct: 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWNLSDIDQDG 63
Query: 469 LVDFSEFVAA 478
+ EF+ A
Sbjct: 64 KLTAEEFILA 73
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
Score = 46.7 bits (111), Expect = 1e-06
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 496 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 547
+ + F D G +T + R M + L + + + +DID+DG+++ EF
Sbjct: 15 KYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEF 70
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 5e-07
Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 42/179 (23%)
Query: 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 474
+ + F D+DK+GS+S EMR A+ + +KL ++ +++ A + + ++DF
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLP-CQLHQVIVARFADDELIIDFDN 663
Query: 475 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT-------------------PE 515
FV + + L + F++ D + G I
Sbjct: 664 FVRCLVRLEILFK------------IFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEH 711
Query: 516 ELRMHTGLKGSIDPLLEEADI---------DKDGRISLSEFRRLLRTASISSRNVPPSP 565
H EE D +S +E +L ++
Sbjct: 712 HHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDG 770
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 21/112 (18%)
Query: 409 TLDDEELADL-------RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 461
L EE L + + + D++G+I E+ A + + L + ++
Sbjct: 790 KLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF-EAAGFHLN-QHIYSMIIR 847
Query: 462 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ G +DF F++ + + + AF D + G I
Sbjct: 848 RYSDETGNMDFDNFISCLVRLDAMFR------------AFRSLDKNGTGQIQ 887
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 2e-04
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 22/117 (18%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAI 462
+ EE R F + + +S E+ L K + + + + ++ +
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVM 783
Query: 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 519
D +T G + F EF L ++ +KW Q +++F+ DR G I EL
Sbjct: 784 DSDTTGKLGFEEF--KYLW------NNIKKW----QGIYKRFETDRSGTIGSNELPG 828
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-06
Identities = 10/54 (18%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 476
+ ++S +E+++ + K+L + + ++++++D N+D +DF E+
Sbjct: 20 SGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 7e-06
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 476
++ + IS R+ L K+L L ++ +++Q +D N DG + F E+
Sbjct: 19 KYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
|
| >1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-05
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLV 470
+ + F DK G ++ E++R + K+ P L+ + V +I++ +D DG V
Sbjct: 8 METMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKV 66
Query: 471 DFSEFV 476
F F
Sbjct: 67 GFQSFF 72
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 1e-05
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 474
+ + + IDVD++G+++ EMR+AL ++ +KL ++ +++ A + + ++DF
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLP-CQLHQVIVARFADDELIIDFDN 661
Query: 475 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
FV + + L + F++ D + G I
Sbjct: 662 FVRCLVRLEILFK------------IFKQLDPENTGTIQ 688
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 476
F + K S+S+ E ++ + + LP LK+ L E ++++D N D + F+E+
Sbjct: 30 TFARQEGRK-DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYW 85
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 3/73 (4%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
L+ T + ++ G + + L K L + + +I D +
Sbjct: 1 LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK---SGLPDLILGKIWDLADTD 57
Query: 466 TDGLVDFSEFVAA 478
G++ EF A
Sbjct: 58 GKGVLSKQEFFVA 70
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 3e-05
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 498 QAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+ + + + G + + +GL + + + AD D G +S EF LR
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
Query: 554 ASISSRNVPPSPS 566
+ + + S S
Sbjct: 74 VACAQNGLEVSLS 86
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 2e-05
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 415 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 468
L + F + ++ E+++ L ++LP L + +++ +D N D
Sbjct: 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDN 71
Query: 469 LVDFSEFV 476
VDF E+
Sbjct: 72 EVDFQEYC 79
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 2e-05
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 415 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 468
L + F + ++ E+++ L ++LP L + +++ +D N D
Sbjct: 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 68
Query: 469 LVDFSEFV 476
VDF E+
Sbjct: 69 EVDFQEYC 76
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 3e-05
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 24/87 (27%)
Query: 483 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDP-------- 529
+L+ D +++ ++ F DI+ DG + +EL + + +
Sbjct: 10 EELDGLDPNRFNPKT--FFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 67
Query: 530 ---------LLEEADIDKDGRISLSEF 547
+++ D ++D ++L EF
Sbjct: 68 EERLRMREHVMKNVDTNQDRLVTLEEF 94
|
| >1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 4e-05
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 16/85 (18%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL------------PWKLKESR--- 454
LD + + F D++ +G + +E+ K+L +++E R
Sbjct: 15 LDPNRF-NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73
Query: 455 VLEILQAIDCNTDGLVDFSEFVAAT 479
+++ +D N D LV EF+A+T
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLAST 98
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 4e-05
Identities = 18/144 (12%), Positives = 38/144 (26%), Gaps = 28/144 (19%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR-----VLEILQAIDCNTDGLVDF 472
+ V + I +++ L ++L ++ ++ +G +D
Sbjct: 7 HHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQ 65
Query: 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP--- 529
EF + Q F+K G + +L +
Sbjct: 66 EEFARLW--------KRLVHY----QHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFI 112
Query: 530 ------LLEEADIDKDGRISLSEF 547
L+ D GR+S
Sbjct: 113 SRELLHLVTLRYSDSVGRVSFPSL 136
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 17/103 (16%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEILQAIDCNTDGLVDFS 473
+ F + G + ++ +A+ + +L ++ ++ G V F
Sbjct: 77 HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVSFP 134
Query: 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 516
V + + + + F D G E
Sbjct: 135 SLVCFLMRLEAMAK------------TFRNLSKDGKGLYLTEM 165
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 4e-05
Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 408 STLDDEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQA 461
+ ++ L + F + ++ E+++ L ++LP L + +++
Sbjct: 14 ACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSN 73
Query: 462 IDCNTDGLVDFSEFV 476
+D N D VDF E+
Sbjct: 74 LDSNRDNEVDFQEYC 88
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 6e-05
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ EE A QF ++ +G I+ ++ R + L + + +I D N DG
Sbjct: 26 AITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ---SGLPQPVLAQIWALADMNNDG 81
Query: 469 LVDFSEFVAA 478
+D EF A
Sbjct: 82 RMDQVEFSIA 91
|
| >3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121 | Back alignment and structure |
|---|
Score = 38.7 bits (90), Expect = 8e-04
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 496 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 547
+ F GFIT ++ R +GL + + + AD++ DGR+ EF
Sbjct: 34 KHDQQFHSLK-PISGFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQVEF 88
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 9e-05
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 476
++ ++S E++Q L K+L +K + + EI Q +D N D VDF EF+
Sbjct: 22 SVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 1e-04
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 476
+ +++ E++ + K+LP L+ + V ++L+ +D N D VDFSEF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 476
Q+ + DK + E+++ + +L L+E + V ++++ +D N DG DF EF+
Sbjct: 17 QYSGREGDK-HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 1e-04
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 415 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDG 468
+ L + F + +S +E++ L +L L V +I++ +D N DG
Sbjct: 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67
Query: 469 LVDFSEFV 476
VDF EFV
Sbjct: 68 EVDFQEFV 75
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 2e-04
Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 410 LDDEELAD--LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
+D + + D +K+ ++ +E++ K+L ++ + +I + D +
Sbjct: 3 MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKD-FLKELNIQVDDGYARKIFRECDHSQT 61
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 512
++ E L +E +AA + + +
Sbjct: 62 DSLEDEEIETF---YKML-TQRAEIDRAFEEAAGSAETLSVERLV 102
|
| >1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 476
A N IS E + +L + + + +++ +D ++DG +DF EF+
Sbjct: 23 AGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 2e-04
Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 33/175 (18%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--VLEILQ 460
L+ + + + ++ A + +F+ + VD G + + + + S +++
Sbjct: 15 LQFVTAKVGNDGWAAVEKRFNQLQVD--GVLLRSRFGKCI------GMDGSDEFAVQMFD 66
Query: 461 AID---CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 517
++ ++ E QL + + R + F+ D + DG +T EE+
Sbjct: 67 SLARKRGIVKQVLTKDELKDF---YEQLTDQGFDN---RLRTFFDMVDKNADGRLTAEEV 120
Query: 518 R--------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISS 558
+ + ++EE D G I + + LL + +
Sbjct: 121 KEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEA 175
|
| >1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 2e-04
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 428 DKNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFV 476
++S +E+++ + K+L K ++ + +++ +D N D V+F E+V
Sbjct: 24 GDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ E+ A FD++ NG +S ++++ L KL + + + D + DG
Sbjct: 8 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 63
Query: 469 LVDFSEFVAATLHVHQ 484
++D EF A V+
Sbjct: 64 MLDRDEFAVAMFLVYC 79
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106 | Back alignment and structure |
|---|
Score = 38.2 bits (89), Expect = 7e-04
Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 496 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 547
+ A F+ +GF++ ++++ +++ L + + E +DID DG + EF
Sbjct: 16 KYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEF 70
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 2e-04
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFV 476
++ DK + E+++ L K+L + +E + + +D N D VDF E+V
Sbjct: 18 EYAGRCGDKY-KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
|
| >1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A* Length = 229 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 3e-04
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 486 EEHDSEKWHLRSQAAFEKFDIDR-DGFITPEELR----MHTGLKGSIDPLLEEADIDKDG 540
E + + F + D DG+++ EL ++ E D+D D
Sbjct: 146 PEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDK 205
Query: 541 RISLSEFRR 549
I+L E+
Sbjct: 206 YIALDEWAG 214
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99 | Back alignment and structure |
|---|
Score = 39.0 bits (91), Expect = 4e-04
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 415 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 468
+ L F + +S E+++ L +L L + V +I+ +D N D
Sbjct: 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDN 68
Query: 469 LVDFSEFV 476
VDF+EFV
Sbjct: 69 EVDFNEFV 76
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113 | Back alignment and structure |
|---|
Score = 38.4 bits (89), Expect = 8e-04
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 424 AIDVDKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 476
++ + +++ E ++ + KDL LK E + I++ +D N D + F EF+
Sbjct: 22 SVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 574 | |||
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 99.93 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.93 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 99.91 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.91 | |
| 3i5g_C | 159 | Myosin catalytic light chain LC-1, mantle muscle; | 99.9 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.9 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.9 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.89 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.89 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 99.88 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.88 | |
| 3i5g_B | 153 | Myosin regulatory light chain LC-2, mantle muscle; | 99.88 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.87 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.87 | |
| 1qv0_A | 195 | Obelin, OBL; photoprotein, bioluminescence, atomic | 99.86 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.86 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.86 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.86 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 99.86 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.85 | |
| 2ovk_C | 159 | Myosin catalytic light chain LC-1, mantle muscle, | 99.85 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.85 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.85 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.85 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.85 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.85 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.85 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.85 | |
| 2hpk_A | 208 | Photoprotein berovin; structural genomics, PSI, pr | 99.85 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.84 | |
| 2mys_C | 149 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.84 | |
| 2lvv_A | 226 | Flagellar calcium-binding protein TB-24; EF-hand, | 99.84 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.84 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.84 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 99.84 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.84 | |
| 1w7j_B | 151 | Myosin light chain 1; motor protein, unconventiona | 99.83 | |
| 1q80_A | 174 | SCP, sarcoplasmic calcium-binding protein; all-alp | 99.83 | |
| 2mys_B | 166 | Myosin; muscle protein, motor protein; HET: MLY; 2 | 99.83 | |
| 3cs1_A | 219 | Flagellar calcium-binding protein; myristoylated, | 99.83 | |
| 2ovk_B | 153 | RLC, myosin regulatory light chain LC-2, mantle mu | 99.82 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.82 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.82 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.81 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.81 | |
| 1wdc_B | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.81 | |
| 3dtp_E | 196 | RLC, myosin regulatory light chain; muscle protein | 99.81 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.81 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.8 | |
| 1ggw_A | 140 | Protein (CDC4P); light chain, cytokinesis, cell cy | 99.8 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 99.8 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.8 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.79 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.78 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.78 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 99.78 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.78 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.77 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.77 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.76 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.76 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.76 | |
| 2qac_A | 146 | Myosin A tail domain interacting protein MTIP; mal | 99.76 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.76 | |
| 3a8r_A | 179 | Putative uncharacterized protein; EF-hand, membran | 99.76 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.76 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.76 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.76 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.75 | |
| 2hps_A | 186 | Coelenterazine-binding protein with bound coelent; | 99.75 | |
| 1ij5_A | 323 | Plasmodial specific LAV1-2 protein; fourty kDa cal | 99.74 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.74 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.74 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.74 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.74 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.74 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.74 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.73 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.72 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.71 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.71 | |
| 2f33_A | 263 | Calbindin; EF-hand, Ca2+-binding, metal binding pr | 99.69 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.68 | |
| 2be4_A | 272 | Hypothetical protein LOC449832; DR.36843, BC083168 | 99.66 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.66 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.63 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.62 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 99.61 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.6 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.6 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.6 | |
| 1djx_A | 624 | PLC-D1, phosphoinositide-specific phospholipase C, | 99.59 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.58 | |
| 2ggz_A | 211 | Guanylyl cyclase-activating protein 3; EF hand, gu | 99.58 | |
| 1y1x_A | 191 | Leishmania major homolog of programmed cell death | 99.58 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.58 | |
| 1bjf_A | 193 | Neurocalcin delta; calcium-binding, myristoylation | 99.57 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.56 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.55 | |
| 2znd_A | 172 | Programmed cell death protein 6; penta-EF-hand pro | 99.55 | |
| 2i7a_A | 174 | Calpain 13; calcium-dependent cytoplasmic cysteine | 99.54 | |
| 2kyc_A | 108 | Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p | 99.53 | |
| 2d8n_A | 207 | Recoverin; structural genomics, NPPSFA, national p | 99.52 | |
| 3sjs_A | 220 | URE3-BP sequence specific DNA binding protein; EF- | 99.5 | |
| 1alv_A | 173 | Calpain, S-camld; calcium binding, calmodulin like | 99.46 | |
| 1qxp_A | 900 | MU-like calpain; M-calpain, MU-calpain, catalytic | 99.44 | |
| 2zkm_X | 799 | 1-phosphatidylinositol-4,5-bisphosphate phosphodie | 99.43 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.41 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.41 | |
| 1gjy_A | 167 | Sorcin, CP-22, V19; calcium binding, calcium-bindi | 99.4 | |
| 1k94_A | 165 | Grancalcin; penta-EF-hand protein, calcium binding | 99.4 | |
| 2l2e_A | 190 | Calcium-binding protein NCS-1; NCS1P, myristoylate | 99.39 | |
| 1fpw_A | 190 | Yeast frequenin, calcium-binding protein NCS-1; EF | 99.39 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.39 | |
| 1juo_A | 198 | Sorcin; calcium-binding proteins, penta-EF-hand, P | 99.38 | |
| 2r2i_A | 198 | Guanylyl cyclase-activating protein 1; EF hand, GC | 99.37 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.37 | |
| 2ehb_A | 207 | Calcineurin B-like protein 4; protein complex, Ca( | 99.32 | |
| 1s6c_A | 183 | KV4 potassium channel-interacting protein kchip1B; | 99.32 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.32 | |
| 2opo_A | 86 | Polcalcin CHE A 3; calcium-binding protein, dimer, | 99.3 | |
| 1wy9_A | 147 | Allograft inflammatory factor 1; EF-hand, calucium | 99.3 | |
| 3dd4_A | 229 | KV channel-interacting protein 4; EF-hands protein | 99.28 | |
| 2jul_A | 256 | Calsenilin; EF-hand, calcium, LXXLL, DNA binding p | 99.28 | |
| 1jba_A | 204 | GCAP-2, protein (guanylate cyclase activating prot | 99.28 | |
| 2kld_A | 123 | Polycystin-2; PC2, PKD2, calcium binding domain, E | 99.28 | |
| 1g8i_A | 190 | Frequenin, neuronal calcium sensor 1; calcium bind | 99.27 | |
| 1eg3_A | 261 | Dystrophin; EF-hand like domain, WW domain, struct | 99.26 | |
| 2lv7_A | 100 | Calcium-binding protein 7; metal binding protein; | 99.26 | |
| 1s1e_A | 224 | KV channel interacting protein 1; kchip, calcium-b | 99.25 | |
| 3a4u_B | 143 | Multiple coagulation factor deficiency protein 2; | 99.24 | |
| 2kn2_A | 92 | Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco | 99.24 | |
| 2zfd_A | 226 | Calcineurin B-like protein 2; calcium binding prot | 99.23 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.23 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.23 | |
| 1nya_A | 176 | Calerythrin; EF-hand, metal binding protein; NMR { | 99.23 | |
| 3bow_A | 714 | Calpain-2 catalytic subunit; cysteine protease, in | 99.22 | |
| 3h4s_E | 135 | KCBP interacting Ca2+-binding protein; kinesin, mo | 99.2 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.2 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 99.19 | |
| 1jfj_A | 134 | Ehcabp, calcium-binding protein; EF-hand, helix-lo | 99.18 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 99.17 | |
| 1j7q_A | 86 | CAVP, calcium vector protein; EF-hand family, calc | 99.16 | |
| 3ohm_B | 885 | 1-phosphatidylinositol-4,5-bisphosphate phosphodi | 99.16 | |
| 3ll8_B | 155 | Calcineurin subunit B type 1; protein-peptide dock | 99.15 | |
| 2sas_A | 185 | Sarcoplasmic calcium-binding protein; 2.40A {Branc | 99.15 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.15 | |
| 2obh_A | 143 | Centrin-2; DNA repair complex EF hand superfamily | 99.14 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.14 | |
| 1xk4_C | 113 | Calgranulin B; S100 family, heterotetramer, metal | 99.14 | |
| 3fs7_A | 109 | Parvalbumin, thymic; calcium-binding protein, EF-h | 99.14 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.14 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.13 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.12 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.12 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.12 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.12 | |
| 3khe_A | 191 | Calmodulin-like domain protein kinase isoform 3; c | 99.11 | |
| 3nso_A | 101 | Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta | 99.11 | |
| 1dtl_A | 161 | Cardiac troponin C; helix-turn-helix, structural p | 99.11 | |
| 3mse_B | 180 | Calcium-dependent protein kinase, putative; CDPKS, | 99.11 | |
| 2lmt_A | 148 | Calmodulin-related protein 97A; spermatogenesis, m | 99.11 | |
| 5pal_A | 109 | Parvalbumin; calcium-binding protein; 1.54A {Triak | 99.11 | |
| 3qrx_A | 169 | Centrin; calcium-binding, EF-hand, cell division, | 99.11 | |
| 2kgr_A | 111 | Intersectin-1; structure, alternative splicing, ca | 99.1 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.1 | |
| 2ccm_A | 191 | Calexcitin; EF hand, calcium, signaling protein; 1 | 99.1 | |
| 2jjz_A | 150 | Ionized calcium-binding adapter molecule 2; EF-han | 99.1 | |
| 2bl0_C | 142 | Myosin regulatory light chain; muscle protein, sli | 99.09 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.09 | |
| 3akb_A | 166 | Putative calcium binding protein; EF-hand, metal b | 99.09 | |
| 3n22_A | 98 | Protein S100-A2; EF-hand, calcium-binding, zinc-bi | 99.09 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 99.09 | |
| 1s6j_A | 87 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.08 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 99.08 | |
| 3fwb_A | 161 | Cell division control protein 31; gene gating, com | 99.08 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 99.08 | |
| 2jnf_A | 158 | Troponin C; stretch activated muscle contraction, | 99.07 | |
| 3u0k_A | 440 | Rcamp; fluorescent protein, calcium binding, EF-ha | 99.07 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 99.07 | |
| 2l4h_A | 214 | Calcium and integrin-binding protein 1; metal bind | 99.07 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 99.07 | |
| 2f2o_A | 179 | Calmodulin fused with calmodulin-binding domain of | 99.07 | |
| 3e3r_A | 204 | Calcyphosin, calcyphosine; human calcyphosine, EF- | 99.07 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 99.07 | |
| 1k9u_A | 78 | Polcalcin PHL P 7; pollen allergen, calcium-bindin | 99.07 | |
| 3zwh_A | 104 | Protein S100-A4; Ca-binding protein-motor protein | 99.07 | |
| 1exr_A | 148 | Calmodulin; high resolution, disorder, metal trans | 99.07 | |
| 3k21_A | 191 | PFCDPK3, calcium-dependent protein kinase 3; calci | 99.06 | |
| 3rm1_A | 92 | Protein S100-B; alpha-helical, EF hand, metal bind | 99.06 | |
| 1bu3_A | 109 | Calcium-binding protein; 1.65A {Merluccius bilinea | 99.06 | |
| 4eto_A | 93 | Protein S100-A4; calcium-binding protein, EF-hand, | 99.06 | |
| 2lnk_A | 113 | Protein S100-A4; EF-hand, calcium binding, all alp | 99.06 | |
| 4ds7_A | 147 | Calmodulin, CAM; protein binding, metal binding, s | 99.06 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.06 | |
| 1fi6_A | 92 | EH domain protein REPS1; EPS15 homology domain, EF | 99.05 | |
| 1rwy_A | 109 | Parvalbumin alpha; EF-hand, calcium-binding, calci | 99.05 | |
| 2pvb_A | 108 | Protein (parvalbumin); calcium binding protein, me | 99.05 | |
| 1top_A | 162 | Troponin C; contractIle system protein; 1.78A {Gal | 99.05 | |
| 1wdc_C | 156 | Scallop myosin; calcium binding protein, muscle pr | 99.04 | |
| 2bec_A | 202 | Calcineurin B homologous protein 2; calcineurin-ho | 99.04 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.04 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 99.04 | |
| 1c07_A | 95 | Protein (epidermal growth factor receptor pathway | 99.04 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.03 | |
| 4drw_A | 121 | Protein S100-A10/annexin A2 chimeric protein; atyp | 99.03 | |
| 1rro_A | 108 | RAT oncomodulin; calcium-binding protein; 1.30A {R | 99.03 | |
| 3nxa_A | 100 | Protein S100-A16; S100 family, calcium binding pro | 99.03 | |
| 1m45_A | 148 | MLC1P, myosin light chain; protein-peptide complex | 99.03 | |
| 1dgu_A | 183 | Calcium-saturated CIB; helical, EF-hands, blood cl | 99.03 | |
| 1qjt_A | 99 | EH1, epidermal growth factor receptor substrate su | 99.03 | |
| 2ktg_A | 85 | Calmodulin, putative; ehcam, Ca-binding protein, p | 99.02 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 99.02 | |
| 1iq3_A | 110 | Ralbp1-interacting protein (partner of ralbp1); EF | 99.02 | |
| 1pva_A | 110 | Parvalbumin; calcium binding; 1.65A {Esox lucius} | 99.02 | |
| 3ox6_A | 153 | Calcium-binding protein 1; EF-hand, calcium-sensor | 99.02 | |
| 2wcb_A | 95 | Protein S100-A12; calcium signalling, HOST-parasit | 99.02 | |
| 1s6i_A | 188 | CDPK, calcium-dependent protein kinase SK5; EF-han | 99.01 | |
| 3sg6_A | 450 | Gcamp2, myosin light chain kinase, green fluoresce | 99.01 | |
| 2kax_A | 92 | Protein S100-A5; EF-hand, calcium binding protien, | 99.0 | |
| 2h2k_A | 106 | Protein S100-A13; calcium binding protein, metal b | 99.0 | |
| 2aao_A | 166 | CDPK, calcium-dependent protein kinase, isoform AK | 98.99 | |
| 2d58_A | 107 | Allograft inflammatory factor 1; EF-hand, metal bi | 98.99 | |
| 1tiz_A | 67 | Calmodulin-related protein, putative; helix-turn-h | 98.99 | |
| 1c7v_A | 81 | CAVP, calcium vector protein; EF-hand family, calc | 98.99 | |
| 3pm8_A | 197 | PFCDPK2, calcium-dependent protein kinase 2; malar | 98.98 | |
| 1wlz_A | 105 | DJBP, CAP-binding protein complex interacting prot | 98.98 | |
| 2joj_A | 77 | Centrin protein; N-terminal domain, centrin soluti | 98.98 | |
| 2kz2_A | 94 | Calmodulin, CAM; TR2C, metal binding protein; NMR | 98.98 | |
| 3li6_A | 66 | Calcium-binding protein; calcium signaling protein | 98.98 | |
| 1j55_A | 95 | S-100P protein; metal binding protein; 2.00A {Homo | 98.97 | |
| 1yx7_A | 83 | Calsensin, LAN3-6 antigen; calcium-binding protein | 98.97 | |
| 2b1u_A | 71 | Calmodulin-like protein 5; CLSP, calmodulin-like S | 98.97 | |
| 2lhi_A | 176 | Calmodulin, serine/threonine-protein phosphatase c | 98.96 | |
| 1xk4_A | 93 | Calgranulin A; S100 family, heterotetramer, metal | 98.96 | |
| 3j04_B | 143 | Myosin regulatory light chain 2, smooth muscle MA | 98.95 | |
| 1avs_A | 90 | Troponin C; muscle contraction, calcium-activated, | 98.95 | |
| 2y5i_A | 99 | S100Z, S100 calcium binding protein Z; metal-bindi | 98.95 | |
| 2bl0_B | 145 | Myosin regulatory light chain; muscle protein, sli | 98.95 | |
| 2pmy_A | 91 | RAS and EF-hand domain-containing protein; rasef, | 98.95 | |
| 1k2h_A | 93 | S100A1, S-100 protein, alpha chain; non-covalent h | 98.95 | |
| 1uhk_A | 191 | Aequorin 2, aequorin; EF-hand motif, complex, lumi | 98.94 | |
| 1eh2_A | 106 | EPS15; calcium binding, signaling domain, NPF bind | 98.94 | |
| 3qr0_A | 816 | Phospholipase C-beta (PLC-beta); PH domain, EF han | 98.94 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 98.94 | |
| 2ct9_A | 208 | Calcium-binding protein P22; EF-hand, metal bindin | 98.93 |
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-78 Score=644.19 Aligned_cols=442 Identities=35% Similarity=0.589 Sum_probs=371.4
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++++.||+|+||.||+|+++.+|+.||||++.+... .......+.+|+.+|+++ +||||
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~hpni 83 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-------------KNKDTSTILREVELLKKL-DHPNI 83 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHH-------------BCSCHHHHHHHHHHHHHC-CCTTB
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccc-------------cchHHHHHHHHHHHHHhC-CCCCc
Confidence 3567899999999999999999999999999999999875421 112356788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.+.+.+|+|||||+||+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+.++
T Consensus 84 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 161 (486)
T 3mwu_A 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDC 161 (486)
T ss_dssp CCEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTC
T ss_pred CeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCC
Confidence 99999999999999999999999999988554 5799999999999999999999999999999999999998655678
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
.+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|++||.+.+..+++..+..+...+
T Consensus 162 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 241 (486)
T 3mwu_A 162 DIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF 241 (486)
T ss_dssp CEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS
T ss_pred CEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 89999999998876666666779999999999999989999999999999999999999999999999999999988887
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCC----ccHHHHHHHHhhhhhhhhhHHHHhhhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP----IDISVLNNMRQFVKYSRLKQFALRALA 407 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~----~~~~~l~~l~~~~~~s~l~~~~l~~~~ 407 (574)
..+.|+.+|+++.+||.+||..||.+|||+.++|+||||+......... .....+.++++|....++++..+..+.
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia 321 (486)
T 3mwu_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMA 321 (486)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888999999999999999999999999999999999765443221 223457778888888889888888777
Q ss_pred ccc-chHHhhhhccccccccCCCCCCcCHHHHHHHHHh---hCCCCcc----------HHHHHHHHHhhcCCCCcceehh
Q 008197 408 STL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPWKLK----------ESRVLEILQAIDCNTDGLVDFS 473 (574)
Q Consensus 408 ~~~-~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~---~~~~~~~----------~~~~~~~~~~~D~d~dg~I~f~ 473 (574)
..+ +.+++++++++|..||.|+||.|+.+||..++.. .+|..++ +++++.+|+.+|.|+||.|+|+
T Consensus 322 ~~l~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~ 401 (486)
T 3mwu_A 322 SKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYS 401 (486)
T ss_dssp HHHCCHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHH
Confidence 665 8899999999999999999999999999766643 3466665 8899999999999999999999
Q ss_pred chHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHH
Q 008197 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEF 547 (574)
Q Consensus 474 EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF 547 (574)
||+..+........ ...+..+|+.||+|+||+|+.+||+.++...| +++.+|+.+|.|+||.|+|+||
T Consensus 402 Ef~~~~~~~~~~~~------~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF 475 (486)
T 3mwu_A 402 EFIASAIDRTILLS------RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475 (486)
T ss_dssp HHHHHHSCTTTTCC------HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHH
T ss_pred HHHHHHHhhhccch------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 99987654322211 23678899999999999999999999998776 4889999999999999999999
Q ss_pred HHHHHhcc
Q 008197 548 RRLLRTAS 555 (574)
Q Consensus 548 ~~~~~~~~ 555 (574)
+.+|....
T Consensus 476 ~~~~~~~~ 483 (486)
T 3mwu_A 476 VEMLQNFV 483 (486)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 99998643
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-77 Score=639.17 Aligned_cols=441 Identities=36% Similarity=0.608 Sum_probs=384.0
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|+++.+|+.||||++.+... ......+.+.+|+.+++++ +||||+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hpniv 89 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV------------KQKTDKESLLREVQLLKQL-DHPNIM 89 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------CBSSCHHHHHHHHHHHTTC-CCTTBC
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc------------ccchHHHHHHHHHHHHHhC-CCCCCC
Confidence 466789999999999999999999999999999999876421 1123456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+|+|||||.||+|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++....++.
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 167 (484)
T 3nyv_A 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 167 (484)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCC
T ss_pred cEEEEEEeCCEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCc
Confidence 999999999999999999999999998843 467999999999999999999999999999999999999975556789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|++||.+.+..+++..+..+...+.
T Consensus 168 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 168 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247 (484)
T ss_dssp EEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EEEEeeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99999999988776666667789999999999999899999999999999999999999999999999999999888877
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC---CCCCccHHHHHHHHhhhhhhhhhHHHHhhhccc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA---SEIPIDISVLNNMRQFVKYSRLKQFALRALAST 409 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~---~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~~~ 409 (574)
.+.|+.+|+++.+||.+||..||.+|||+.++|+||||+..... ...+.....+.++++|...+++++..+..+...
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~ 327 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSK 327 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhc
Confidence 77888899999999999999999999999999999999875432 233444567888999999999999888888766
Q ss_pred c-chHHhhhhccccccccCCCCCCcCHHHHHHHHH---hhCCCCcc-------HHHHHHHHHhhcCCCCcceehhchHHH
Q 008197 410 L-DDEELADLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAA 478 (574)
Q Consensus 410 ~-~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~---~~~~~~~~-------~~~~~~~~~~~D~d~dg~I~f~EF~~~ 478 (574)
+ +++++++++++|..+|.|+||.|+.+||..++. +.+|..++ +.+++.+|+.+|.|++|.|+|+||+.+
T Consensus 328 ~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~ 407 (484)
T 3nyv_A 328 LTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTV 407 (484)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence 5 788999999999999999999999999965543 34677777 889999999999999999999999987
Q ss_pred HhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
+...... .....++.+|+.||+|+||+|+.+||+.++...+ +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 408 ~~~~~~~------~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 408 AMDRKTL------LSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHHHH------HHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHhcccc------CcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 7643211 1234688899999999999999999999987533 48999999999999999999999999864
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-77 Score=641.47 Aligned_cols=441 Identities=37% Similarity=0.621 Sum_probs=380.4
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++++.||+|+||.||+|+++.++..||||++.+... .......+.+|+.+++.+ +||||
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~hpni 98 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-------------STSSNSKLLEEVAVLKLL-DHPNI 98 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------------------CTTHHHHHHHHHHTTC-CCTTB
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc-------------CchHHHHHHHHHHHHHhC-CCCCC
Confidence 3466789999999999999999999999999999999976421 112345688999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++++|.+.+.+|+|||||+||+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+..+
T Consensus 99 v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 176 (494)
T 3lij_A 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDA 176 (494)
T ss_dssp CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTC
T ss_pred CeEEEEEEeCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCC
Confidence 99999999999999999999999999988544 5799999999999999999999999999999999999998655567
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
.+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.+..+++..+..+...+
T Consensus 177 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 256 (494)
T 3lij_A 177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF 256 (494)
T ss_dssp CEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred cEEEEECCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 89999999998877666666779999999999999888999999999999999999999999999999999999988888
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC----CCCCccHHHHHHHHhhhhhhhhhHHHHhhhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA----SEIPIDISVLNNMRQFVKYSRLKQFALRALA 407 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~----~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~ 407 (574)
..+.|+.+|+.+.+||.+||+.||.+|||+.++|+||||++.... ...+.....+.++++|....++++..+..+.
T Consensus 257 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia 336 (494)
T 3lij_A 257 DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMA 336 (494)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 888888999999999999999999999999999999999874321 2233444678889999998999998888777
Q ss_pred ccc-chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC--------CCccHHHHHHHHHhhcCCCCcceehhchHHH
Q 008197 408 STL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478 (574)
Q Consensus 408 ~~~-~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~--------~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~ 478 (574)
..+ +++++++++++|..||.|+||.|+.+||..++.. ++ ..+++.+++.+|+.+|.|+||.|+|+||+.+
T Consensus 337 ~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~ 415 (494)
T 3lij_A 337 SKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSK-LSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTV 415 (494)
T ss_dssp HHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHH-HHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHH-hcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 666 8899999999999999999999999999999965 43 3566899999999999999999999999987
Q ss_pred HhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
+........ ...++.+|+.||+|+||+|+.+||+.++.... +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 416 ~~~~~~~~~------~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 489 (494)
T 3lij_A 416 AMDRKSLLS------KDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKL 489 (494)
T ss_dssp HSCHHHHTC------HHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHH
T ss_pred HHhhhcccc------HHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhh
Confidence 754321111 23678899999999999999999999987532 48999999999999999999999999875
Q ss_pred c
Q 008197 555 S 555 (574)
Q Consensus 555 ~ 555 (574)
.
T Consensus 490 ~ 490 (494)
T 3lij_A 490 C 490 (494)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-77 Score=640.28 Aligned_cols=452 Identities=34% Similarity=0.573 Sum_probs=382.7
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++++.||+|+||.||+|.++.+++.||||++.+....... ............+.+.+|+.+|+.| +||||
T Consensus 32 ~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--~~~~~~~~~~~~~~~~~E~~~l~~l-~hpni 108 (504)
T 3q5i_A 32 GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGR--YSDDNKNIEKFHEEIYNEISLLKSL-DHPNI 108 (504)
T ss_dssp SCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC------------------CTHHHHHHHHHHHHTC-CCTTB
T ss_pred CCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccc--ccccchhhHHHHHHHHHHHHHHHhC-CCCCC
Confidence 45678999999999999999999999999999999999765321100 0000111123456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.+.+.+|+|||||+||+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++..+...
T Consensus 109 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 109 IKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp CCEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCS
T ss_pred CeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCc
Confidence 99999999999999999999999999988554 5799999999999999999999999999999999999998644445
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
.+||+|||+|............+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.+..+++..+..+...+
T Consensus 187 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 266 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF 266 (504)
T ss_dssp SEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred cEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 79999999998877666667789999999999999888999999999999999999999999999999999999988777
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCC---CccHHHHHHHHhhhhhhhhhHHHHhhhcc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI---PIDISVLNNMRQFVKYSRLKQFALRALAS 408 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~---~~~~~~l~~l~~~~~~s~l~~~~l~~~~~ 408 (574)
+...|+.+|+++.+||.+||+.||.+|||+.++|+||||+........ ......+.++++|...+++++..+..+..
T Consensus 267 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~ 346 (504)
T 3q5i_A 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGS 346 (504)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHH
T ss_pred CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 766778899999999999999999999999999999999976543321 11234577788888888998888777776
Q ss_pred cc-chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhC--------CCCccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 409 TL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL--------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 409 ~~-~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~--------~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
.+ +++++++++++|..||.|+||.|+.+||..++.. + |..+++.+++.+|+.+|.|+||.|+|+||+.++
T Consensus 347 ~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~ 425 (504)
T 3q5i_A 347 KLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNV-LRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVC 425 (504)
T ss_dssp HTSCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHH-hhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 55 8899999999999999999999999999999854 4 567889999999999999999999999999877
Q ss_pred hhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 480 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
....... . ...++.+|+.||+|++|+|+.+||+.++...+ +++++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 426 ~~~~~~~---~---~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 426 MDKQILF---S---EERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp SCHHHHT---C---HHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred Hhhhccc---C---HHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 5432111 1 23678899999999999999999999987544 589999999999999999999999998654
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-63 Score=494.13 Aligned_cols=256 Identities=33% Similarity=0.578 Sum_probs=229.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+.... .....+.+.+|+++|+.| +|||||+++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~------------~~~~~~~~~~E~~il~~l-~HpnIv~l~ 98 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII------------KENKVPYVTRERDVMSRL-DHPFFVKLY 98 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC------------CHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 4699999999999999999999999999999999875321 123456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|++++.+|||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 99 ~~~~~~~~~yivmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~---~~g~vKl 173 (311)
T 4aw0_A 99 FTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQI 173 (311)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc---CCCCEEE
Confidence 999999999999999999999999854 36799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC---CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+.+... ....+.+||+.|||||++.+. ++.++|||||||++|+|++|++||.+.+..+++.+|..+...+
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~ 253 (311)
T 4aw0_A 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253 (311)
T ss_dssp CCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred EEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999876432 234578999999999999764 6889999999999999999999999999999999999887665
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHH------HhcCcccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVREG 373 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~------~l~hp~~~~~ 373 (574)
+ +.+|+++++||.+||++||.+|||+.| +++||||+..
T Consensus 254 p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 254 P----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp C----TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred C----cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 4 468999999999999999999999987 5899999864
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-62 Score=494.80 Aligned_cols=258 Identities=33% Similarity=0.572 Sum_probs=228.1
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
...|++++.||+|+||+||+|+++.+|+.||||++..... ...+.+.+|+.+|+.| +|||||++
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---------------~~~~~~~~Ei~il~~l-~HpnIV~l 136 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---------------QRRELLFNEVVIMRDY-QHENVVEM 136 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC---------------SSGGGGHHHHHHHHHC-CCTTBCCE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch---------------hHHHHHHHHHHHHHhC-CCCCCCcE
Confidence 3579999999999999999999999999999999975421 1234578999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++|.+++.+|||||||+||+|.+++.. .++++..++.++.||+.||.|||++|||||||||+||||+ .++.+|
T Consensus 137 ~~~~~~~~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vK 210 (346)
T 4fih_A 137 YNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVK 210 (346)
T ss_dssp EEEEEETTEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEE
T ss_pred EEEEEECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCCCEE
Confidence 9999999999999999999999997743 4699999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCC-CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||+|+.+... ....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..+..... ..
T Consensus 211 l~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~ 289 (346)
T 4fih_A 211 LSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PR 289 (346)
T ss_dssp ECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CC
T ss_pred EecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CC
Confidence 9999999876543 44567899999999999875 478999999999999999999999999988888888876543 23
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
...++.+|+++++||.+||+.||.+|||+.|+|+||||++...
T Consensus 290 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 290 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence 3445679999999999999999999999999999999997653
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-63 Score=482.89 Aligned_cols=255 Identities=33% Similarity=0.628 Sum_probs=212.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+... ......+.+.+|+.+|+.| +|||||+++
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~------------~~~~~~~~~~~Ei~il~~l-~HpnIv~~~ 79 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL------------AKSDMQGRIEREISYLRLL-RHPHIIKLY 79 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------------------CHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc------------CCHHHHHHHHHHHHHHHHC-CCCCCCeEE
Confidence 479999999999999999999999999999999976521 1122356789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+||||||| +|+|.+++.. .+++++..++.++.||+.||+|||++||+||||||+|||++ .++.+||
T Consensus 80 ~~~~~~~~~~ivmEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~vkl 153 (275)
T 3hyh_A 80 DVIKSKDEIIMVIEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKI 153 (275)
T ss_dssp EEEECSSEEEEEEECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCCEEE
T ss_pred EEEEECCEEEEEEeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC---CCCCEEE
Confidence 9999999999999999 7899998854 46899999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-C-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+.........+.+||+.|||||++.+. + +.++|||||||++|+|++|++||.+.+...++..+..+...++
T Consensus 154 ~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p- 232 (275)
T 3hyh_A 154 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP- 232 (275)
T ss_dssp CCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC-
T ss_pred eecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence 999999887666666778999999999999865 3 5789999999999999999999999998889999988765543
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
..+|+++++||.+||+.||.+|||+.|+++||||+..
T Consensus 233 ---~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 233 ---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred ---CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 4689999999999999999999999999999999853
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-63 Score=498.61 Aligned_cols=258 Identities=24% Similarity=0.495 Sum_probs=225.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.| +|||||+++
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-------------~~~~~~~~~~E~~il~~l-~HpnIV~~~ 89 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-------------SSKEREESRREVAVLANM-KHPNIVQYR 89 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-------------CHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-------------CHHHHHHHHHHHHHHHHC-CCCCCCcEE
Confidence 589999999999999999999999999999999976521 223457889999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+++.+|||||||+||+|.+++.......+++..++.|+.||+.||.|||++|||||||||+||||+ .++.+||
T Consensus 90 ~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl 166 (350)
T 4b9d_A 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQL 166 (350)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEE
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCCEEE
Confidence 9999999999999999999999999776667789999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+...... .....+||+.|||||++.+. ++.++||||||||||||++|++||.+.+..+++.++..+...
T Consensus 167 ~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~--- 243 (350)
T 4b9d_A 167 GDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP--- 243 (350)
T ss_dssp CSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---
T ss_pred cccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---
Confidence 9999998765432 23467899999999999764 688999999999999999999999999999999999887643
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+.+..+|+++.+||.+||+.||.+|||+.++|+||||++.
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 2345789999999999999999999999999999999863
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-62 Score=478.83 Aligned_cols=255 Identities=21% Similarity=0.350 Sum_probs=216.8
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||+|+||+||+|+++.+++.||||++.... ......+.+.+|+.+|++| +|||||+++++
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-------------~~~~~~~~~~~E~~il~~l-~HpnIV~~~~~ 93 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-------------LTKSERQRFKEEAEMLKGL-QHPNIVRFYDS 93 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-------------SCHHHHHHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh-------------CCHHHHHHHHHHHHHHHhC-CCCCCCcEEEE
Confidence 478889999999999999999999999999997642 1223456799999999999 59999999999
Q ss_pred EEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCCCCC
Q 008197 178 FED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 178 ~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~ 251 (574)
|.+ ++.+|||||||+||+|.+++.. ...+++..++.++.||+.||.|||++| ||||||||+||||+. .++
T Consensus 94 ~~~~~~~~~~~~lvmEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~--~~g 169 (290)
T 3fpq_A 94 WESTVKGKKCIVLVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTG 169 (290)
T ss_dssp EEEEETTEEEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS--TTS
T ss_pred EeeccCCCcEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC--CCC
Confidence 875 4578999999999999998854 367999999999999999999999998 999999999999974 467
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPD 330 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~ 330 (574)
.+||+|||+|+... .....+.+||+.|||||++.+.++.++|||||||++|||+||++||.+..... ++..+..+..
T Consensus 170 ~vKl~DFGla~~~~-~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~- 247 (290)
T 3fpq_A 170 SVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK- 247 (290)
T ss_dssp CEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-
T ss_pred CEEEEeCcCCEeCC-CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC-
Confidence 99999999998654 34456789999999999999999999999999999999999999998765544 4444443322
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+....+..++++.+||.+||..||.+|||+.++|+||||++.
T Consensus 248 -~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 248 -PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp -CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred -CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 222234578999999999999999999999999999999863
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-61 Score=495.89 Aligned_cols=259 Identities=33% Similarity=0.565 Sum_probs=229.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..+.|++++.||+|+||.||+|+++.+|+.||||++..... ...+.+.+|+.+|+.| +|||||+
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---------------~~~~~~~~Ei~il~~l-~HpnIV~ 212 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---------------QRRELLFNEVVIMRDY-QHENVVE 212 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---------------SSGGGHHHHHHHHHHC-CCTTBCC
T ss_pred hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---------------hHHHHHHHHHHHHHhC-CCCCCCc
Confidence 34679999999999999999999999999999999976421 1234578999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++|.+++.+|||||||+||+|.+++.. .++++..++.|+.||+.||.|||++|||||||||+||||+ .++.|
T Consensus 213 l~~~~~~~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~g~v 286 (423)
T 4fie_A 213 MYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRV 286 (423)
T ss_dssp EEEEEEETTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TTCCE
T ss_pred eEEEEEECCEEEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCE
Confidence 99999999999999999999999997742 4699999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC-CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||+|+.+... ....+.+||+.|||||++.+ .|+.++|||||||++|||++|++||.+.+..+.+..|..... .
T Consensus 287 Kl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~ 365 (423)
T 4fie_A 287 KLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-P 365 (423)
T ss_dssp EECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-C
T ss_pred EEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-C
Confidence 99999999876543 44567899999999999875 478999999999999999999999999998888888877543 2
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
....+..+|+++++||.+||..||.+|||+.|+|+||||++...
T Consensus 366 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 366 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 33456789999999999999999999999999999999997643
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-61 Score=478.95 Aligned_cols=255 Identities=28% Similarity=0.486 Sum_probs=218.0
Q ss_pred cceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++++.||+|+||+||+|++. .+++.||||++.+.... ......+.+|+.+|++| +|||||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~-------------~~~~~~~~~E~~il~~l-~HpnIv 89 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLK-------------VRDRVRTKMERDILVEV-NHPFIV 89 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEE-------------EEECC------CCCCCC-CCTTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcC-------------hHHHHHHHHHHHHHHHC-CCCCCC
Confidence 47999999999999999999874 46889999999765211 11223578899999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++|.+++.+|||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 90 ~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~ 164 (304)
T 3ubd_A 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGH 164 (304)
T ss_dssp CEEEEEEETTEEEEEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTSC
T ss_pred eEEEEEEECCEEEEEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc---CCCC
Confidence 999999999999999999999999998854 36799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+||+|||+|+.... .....+.+||+.|||||++.+ .++.++|||||||++|||+||++||.+.+..+++..+......
T Consensus 165 vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~ 244 (304)
T 3ubd_A 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244 (304)
T ss_dssp EEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred EEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCC
Confidence 99999999986543 334567899999999999875 4689999999999999999999999999999999999987655
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
++ +.+|+++.+||.+||++||.+||| ++|+++||||+..
T Consensus 245 ~p----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 245 MP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred CC----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 43 468999999999999999999998 5799999999864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-60 Score=476.15 Aligned_cols=252 Identities=27% Similarity=0.363 Sum_probs=219.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.| +|||||+++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------------------~~~E~~il~~l-~HpnIV~l~ 116 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------------------RVEELVACAGL-SSPRIVPLY 116 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------------------CTHHHHTTTTC-CCTTBCCEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------------------HHHHHHHHHhC-CCCCCCcEE
Confidence 468999999999999999999999999999999976421 13699999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC-CeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~-~vk 254 (574)
++|.+++.+|||||||+||+|.+++.. .+++++..++.++.||+.||.|||++|||||||||+||||+. ++ .+|
T Consensus 117 ~~~~~~~~~~ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~---~g~~vK 191 (336)
T 4g3f_A 117 GAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS---DGSRAA 191 (336)
T ss_dssp EEEEETTEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECT---TSCCEE
T ss_pred EEEEECCEEEEEEeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeC---CCCEEE
Confidence 999999999999999999999998854 367999999999999999999999999999999999999984 44 699
Q ss_pred EEeeccccccCCCC------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||+|+.+.... .....+||+.|||||++.+. ++.++|||||||++|||++|++||.+.+...++..+...
T Consensus 192 l~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~ 271 (336)
T 4g3f_A 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE 271 (336)
T ss_dssp ECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS
T ss_pred EeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC
Confidence 99999998765432 12346899999999998764 688999999999999999999999988888888888887
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHH-------------hcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-------------LSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~-------------l~hp~~~~~~ 374 (574)
.+.+. ..++.+|+++.+||.+||.+||.+|||+.|+ |+|||+.+..
T Consensus 272 ~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~ 330 (336)
T 4g3f_A 272 PPPIR-EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK 330 (336)
T ss_dssp CCGGG-GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred CCCch-hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence 65432 2346799999999999999999999999997 6799998754
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-58 Score=475.09 Aligned_cols=262 Identities=27% Similarity=0.418 Sum_probs=221.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.| +|||||
T Consensus 51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-------------~~~~~~~~~~Ei~il~~l-~HpnIv 116 (398)
T 4b99_A 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-------------VVTNAKRTLRELKILKHF-KHDNII 116 (398)
T ss_dssp CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-------------SHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-------------chHHHHHHHHHHHHHHhc-CCCCcc
Confidence 345789999999999999999999999999999999975421 123456788999999999 599999
Q ss_pred eEEEEEEc------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 173 KFYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 173 ~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
++++++.. .+.+|||||||+ |+|++++. ..+++++..++.+++||+.||.|||++|||||||||+|||++
T Consensus 117 ~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~- 192 (398)
T 4b99_A 117 AIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN- 192 (398)
T ss_dssp CEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-
T ss_pred eEeeeeecccccccCCEEEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccC-
Confidence 99999764 468999999995 68998883 457899999999999999999999999999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCC-----CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH
Q 008197 247 AKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG 319 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~ 319 (574)
.++.+||+|||+|+.+... ....+.+||+.|||||++.+ .++.++||||+|||+|||++|++||.+.+..+
T Consensus 193 --~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~ 270 (398)
T 4b99_A 193 --ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH 270 (398)
T ss_dssp --TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH
T ss_pred --CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH
Confidence 4789999999999865332 23456799999999999865 35889999999999999999999999998888
Q ss_pred HHHHHHhCCCCCCC-----------------------C----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 320 IFKEVLRNKPDFRR-----------------------K----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 320 ~~~~i~~~~~~~~~-----------------------~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.+..|......+.. . .++.+++++.+||.+||+.||.+|||+.++|+||||++
T Consensus 271 ~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 271 QLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350 (398)
T ss_dssp HHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence 88777653222111 1 13567899999999999999999999999999999997
Q ss_pred cC
Q 008197 373 GG 374 (574)
Q Consensus 373 ~~ 374 (574)
..
T Consensus 351 ~~ 352 (398)
T 4b99_A 351 YH 352 (398)
T ss_dssp TC
T ss_pred CC
Confidence 54
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-58 Score=466.84 Aligned_cols=256 Identities=27% Similarity=0.494 Sum_probs=210.7
Q ss_pred cccceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
+.++|++.+.||+|+||+||+|+++ .+++.||||.+.+.. ....+.+|+.+|+.+.+|||
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----------------~~~~~~~E~~~l~~~~~h~n 81 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----------------HPIRIAAELQCLTVAGGQDN 81 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----------------CHHHHHHHHHHHHHTCSBTT
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----------------CHHHHHHHHHHHHHhcCCCC
Confidence 5568999999999999999999875 467899999886541 23467899999999977999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
||+++++|.+.+++|||||||+||+|.+.+ ..+++..++.++.||+.||.|||++|||||||||+|||++. +.
T Consensus 82 Iv~l~~~~~~~~~~~lvmE~~~g~~L~~~~-----~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~--~~ 154 (361)
T 4f9c_A 82 VMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR--RL 154 (361)
T ss_dssp BCCCSEEEEETTEEEEEEECCCCCCHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TT
T ss_pred CceEEEEEEECCEEEEEEeCCCcccHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC--CC
Confidence 999999999999999999999999999987 35999999999999999999999999999999999999984 34
Q ss_pred CCeEEEeeccccccCCCC-----------------------------CccccccCccccchHhhhc--CCCCCcchHhHH
Q 008197 251 SSLKATDFGLSDFIKPGK-----------------------------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIG 299 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG 299 (574)
+.+||+|||+|+...... ...+.+||+.|+|||++.+ .++.++||||+|
T Consensus 155 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 155 KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 789999999997543221 1234689999999999865 368899999999
Q ss_pred HHHHHHHhCCCCCCCCCh-hHHHHHHHhC--------------------------------------C------------
Q 008197 300 VITYILLCGRRPFWDKTE-DGIFKEVLRN--------------------------------------K------------ 328 (574)
Q Consensus 300 ~il~elltg~~Pf~~~~~-~~~~~~i~~~--------------------------------------~------------ 328 (574)
||+|||++|+.||...+. ...+..|... .
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 314 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQG 314 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccc
Confidence 999999999999976543 3333332210 0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.......|+.+|+++.+||.+||+.||.+|||++|+|+||||++.
T Consensus 315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 001123467789999999999999999999999999999999874
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=484.30 Aligned_cols=264 Identities=34% Similarity=0.623 Sum_probs=239.2
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+-++|++++.||+|+||.||+|+++.+|+.||||++.+.. ....+.+.+|+.+|+.| +|||||
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---------------~~~~~~~~~Ei~il~~l-~hpnIv 217 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---------------ESDKETVRKEIQTMSVL-RHPTLV 217 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---------------HHHHHHHHHHHHHHHHT-CCTTBC
T ss_pred cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---------------hhhHHHHHHHHHHHHhC-CCCCCC
Confidence 34568999999999999999999999999999999987642 12346788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++|.+.+.+|||||||+||+|++++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.. ..+.
T Consensus 218 ~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~ 295 (573)
T 3uto_A 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNE 295 (573)
T ss_dssp CEEEEEECSSEEEEEEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCC
T ss_pred eEEEEEEECCEEEEEEeecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCC
Confidence 999999999999999999999999998853 34579999999999999999999999999999999999999842 3578
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||+|+.+.........+||+.|||||++.+. ++.++|||||||++|+|++|++||.+.+..+.+..|......+
T Consensus 296 vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~ 375 (573)
T 3uto_A 296 LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375 (573)
T ss_dssp EEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC
T ss_pred EEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCC
Confidence 999999999988777777788999999999998765 5889999999999999999999999999999999999988877
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+...|+.+|+++++||.+||+.||.+|||+.++|+||||+...
T Consensus 376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~ 418 (573)
T 3uto_A 376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 418 (573)
T ss_dssp CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence 7777889999999999999999999999999999999999754
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-57 Score=446.97 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=197.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|++++.||+|+||+||+|+++.+|+.||||++.... .....+.+.+|+.+|++| +|||||+++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--------------~~~~~~~~~~E~~il~~l-~HpnIV~~~ 69 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--------------RELAREKVMREVKALAKL-EHPGIVRYF 69 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--------------SHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--------------CHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 46999999999999999999999999999999987542 123456789999999999 599999999
Q ss_pred EEEEcCC------------EEEEEEeccCCCchHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 176 NAFEDDN------------YVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 176 ~~~~~~~------------~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
++|.+.+ ++|||||||+||+|.+++..... ...++..++.++.||+.||.|||++|||||||||+||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NI 149 (299)
T 4g31_A 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNI 149 (299)
T ss_dssp EEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred EEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHe
Confidence 9987543 47999999999999998854321 2345677899999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCC-------------CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhC
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGK-------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG 308 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~-------------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg 308 (574)
|++ .++.+||+|||+|+...... ...+.+||+.|||||++.+ .++.++|||||||++|||++
T Consensus 150 Ll~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~- 225 (299)
T 4g31_A 150 FFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY- 225 (299)
T ss_dssp EEC---TTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS-
T ss_pred EEC---CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc-
Confidence 998 47899999999998764322 1234689999999999876 46899999999999999996
Q ss_pred CCCCCCCChh-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 309 RRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 309 ~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
||.+.... ..+..+.... ++ +.++..++.+.+||.+||+.||.+|||+.++|+||||++.
T Consensus 226 --Pf~~~~~~~~~~~~~~~~~--~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 226 --PFSTQMERVRTLTDVRNLK--FP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp --CCSSHHHHHHHHHHHHTTC--CC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred --CCCCccHHHHHHHHHhcCC--CC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 88654322 2223333221 11 1233456778999999999999999999999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-56 Score=475.32 Aligned_cols=255 Identities=24% Similarity=0.394 Sum_probs=217.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHH---HHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE---VKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E---~~il~~l~~hpniv 172 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+...... .....+.+| +.+++.+ +|||||
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~------------~~~~~~~~E~~~l~ll~~~-~HP~IV 255 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK------------QGETLALNERIMLSLVSTG-DCPFIV 255 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT------------TCHHHHHHHHHHHHHHSSS-CCTTBC
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh------------hhHHHHHHHHHHHHHHhhC-CCCCEe
Confidence 469999999999999999999999999999999987633111 122233444 4555556 699999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++|.+.+.+|||||||+||+|.++|.. .+.+++..++.|+.||+.||.|||++|||||||||+||||+ .+++
T Consensus 256 ~l~~~f~~~~~lylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~~G~ 330 (689)
T 3v5w_A 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGH 330 (689)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTSC
T ss_pred EEEEEEEECCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe---CCCC
Confidence 999999999999999999999999998854 46799999999999999999999999999999999999998 4889
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh-c-CCCCCcchHhHHHHHHHHHhCCCCCCCCC---hhHHHHHHHhC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DvwSlG~il~elltg~~Pf~~~~---~~~~~~~i~~~ 327 (574)
|||+|||+|+..... ...+.|||+.|||||++. + .|+.++||||||||+|||++|++||.+.+ ...+...+...
T Consensus 331 vKL~DFGlA~~~~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~ 409 (689)
T 3v5w_A 331 VRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409 (689)
T ss_dssp EEECCCTTCEECSSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC
T ss_pred EEecccceeeecCCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Confidence 999999999876543 345679999999999985 3 47899999999999999999999997643 33456666665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
...++ +.+|+++++||.+||++||.+|++ ++++++||||+..
T Consensus 410 ~~~~p----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 410 AVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp CCCCC----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred CCCCC----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 54433 568999999999999999999998 7999999999874
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-56 Score=443.78 Aligned_cols=253 Identities=22% Similarity=0.363 Sum_probs=215.5
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|.+.+.||+|+||+||+|++. .++..||||+++... ....+.+.+|+.+|++| +|||
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---------------~~~~~~f~~E~~il~~l-~Hpn 76 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---------------DNARKDFHREAELLTNL-QHEH 76 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC---------------HHHHHHHHHHHHHHTTC-CCTT
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC---------------hHHHHHHHHHHHHHHhC-CCCC
Confidence 47999999999999999999875 357899999987541 23456799999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK-----------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
||+++++|.+++.+|||||||+||+|.++|... ....+++..+..++.||+.||.|||+++||||||||
T Consensus 77 IV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp 156 (299)
T 4asz_A 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156 (299)
T ss_dssp BCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCH
Confidence 999999999999999999999999999998643 235799999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCC
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWD 314 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~ 314 (574)
+|||++. ++.+||+|||+|+....... ....+||+.|||||++. +.++.++|||||||++|||+| |+.||.+
T Consensus 157 ~NILl~~---~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~ 233 (299)
T 4asz_A 157 RNCLVGE---NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233 (299)
T ss_dssp GGEEECG---GGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred hhEEECC---CCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999984 78999999999986643322 23457999999999886 467899999999999999998 9999999
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 315 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.+..+++..+..+.... ..+.+|+++.+||.+||+.||++|||+.++ ++|+++
T Consensus 234 ~~~~~~~~~i~~~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~ 286 (299)
T 4asz_A 234 LSNNEVIECITQGRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQN 286 (299)
T ss_dssp SCHHHHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHH
T ss_pred CCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHH
Confidence 99989998888875321 225688999999999999999999999999 557654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=438.90 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=204.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
+++.+.+.||+|+||+||+|++. ..||||+++... ......+.+.+|+.+|++| +|||||+++
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-------------~~~~~~~~f~~E~~il~~l-~HpNIV~l~ 98 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-------------PTPEQFQAFRNEVAVLRKT-RHVNILLFM 98 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-------------CCHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-------------CCHHHHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 47889999999999999999754 369999986531 1234567899999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.. +.+|||||||+||+|.+++... ..++++..+..|+.||+.||.|||+++||||||||+||||+ .++.+||
T Consensus 99 g~~~~-~~~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki 173 (307)
T 3omv_A 99 GYMTK-DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKI 173 (307)
T ss_dssp EEECS-SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEE
T ss_pred EEEEC-CeEEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEE
Confidence 98865 5689999999999999988543 46799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC---CCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||+|+..... ......+||+.|||||++.+ .++.++|||||||+||||+||+.||.+.+.......++...
T Consensus 174 ~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~ 253 (307)
T 3omv_A 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG 253 (307)
T ss_dssp CCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTT
T ss_pred eeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcC
Confidence 999999875432 23456799999999999864 36789999999999999999999998877665555555443
Q ss_pred CCCC--CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 329 PDFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 329 ~~~~--~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
...+ ...++.+|+++.+||.+||+.||.+|||+.+++++
T Consensus 254 ~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 254 YASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp CCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred CCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 2222 22346789999999999999999999999987543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-55 Score=438.55 Aligned_cols=249 Identities=21% Similarity=0.318 Sum_probs=207.8
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|.+.+.||+|+||+||+|+++ .+++.||||+++... ....+.+.+|+.+|++| +|||
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---------------~~~~~~f~~E~~il~~l-~Hpn 104 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---------------ESARQDFQREAELLTML-QHQH 104 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS---------------HHHHHHHHHHHHHHTTC-CCTT
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC---------------HHHHHHHHHHHHHHHhC-CCCC
Confidence 46889999999999999999864 368899999986531 23456799999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDl 237 (574)
||+++++|.+.+.+|||||||++|+|.+++.... ..++++..+..|+.||+.||.|||+++||||||
T Consensus 105 IV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDL 184 (329)
T 4aoj_A 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDL 184 (329)
T ss_dssp BCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred CCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccc
Confidence 9999999999999999999999999999885432 246999999999999999999999999999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCC
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPF 312 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf 312 (574)
||+||||+ .++.+||+|||+|+...... .....+||+.|||||++.+ .++.++|||||||+||||+| |+.||
T Consensus 185 Kp~NILl~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf 261 (329)
T 4aoj_A 185 ATRNCLVG---QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261 (329)
T ss_dssp CGGGEEEE---TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred cHhhEEEC---CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCC
Confidence 99999998 57899999999998764332 2245689999999999875 56889999999999999999 99999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.+..+++..+..+... +..+.+|+++.+||.+||+.||++|||+.+++.
T Consensus 262 ~~~~~~~~~~~i~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 262 YQLSNTEAIDCITQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp CSSCHHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 999988888888876432 222468999999999999999999999999965
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-55 Score=434.70 Aligned_cols=251 Identities=20% Similarity=0.275 Sum_probs=213.8
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..+++.+.||+|+||+||+|+.. .+++.||||++.... .....+.+.+|+.+|++| +|||
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--------------~~~~~~~f~~E~~il~~l-~HpN 90 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--------------EGPLREEFRHEAMLRARL-QHPN 90 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--------------CC-CHHHHHHHHHHHHHC-CCTT
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--------------ChHHHHHHHHHHHHHHhC-CCCC
Confidence 46889999999999999999853 467899999986531 123456799999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeec
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrD 236 (574)
||+++++|.+++.+|||||||++|+|.++|.... ...+++..+..++.||+.||.|||+++|||||
T Consensus 91 IV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRD 170 (308)
T 4gt4_A 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKD 170 (308)
T ss_dssp BCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred CCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999985432 24689999999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCeEEEeeccccccCCC---CCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCC
Q 008197 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRP 311 (574)
Q Consensus 237 lkp~Nill~~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~P 311 (574)
|||+||||+ +++.+||+|||+|+..... ......+||+.|||||++. +.++.++|||||||+||||+| |..|
T Consensus 171 LK~~NILl~---~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~P 247 (308)
T 4gt4_A 171 LATRNVLVY---DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247 (308)
T ss_dssp CSGGGEEEC---GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred ccccceEEC---CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCC
Confidence 999999998 4789999999999866432 2234568999999999876 567999999999999999998 8999
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
|.+.+..++...+..+... +..+.+|+.+.+|+.+||+.||.+|||+.+|+++
T Consensus 248 f~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 248 YCGYSNQDVVEMIRNRQVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp TTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999988888888765432 2235688999999999999999999999999764
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-54 Score=455.37 Aligned_cols=299 Identities=30% Similarity=0.601 Sum_probs=259.9
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.+ +||||+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-------------~~~~~~~~~~E~~il~~l-~hpnIv 73 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-------------SARDHQKLEREARICRLL-KHPNIV 73 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-------------HHHHHHHHHHHHHHHHHC-CBTTBC
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-------------CHHHHHHHHHHHHHHHhC-CCcCCC
Confidence 356789999999999999999999999999999999976532 123456788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+|+|||||+||+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++....++.
T Consensus 74 ~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~ 151 (444)
T 3soa_A 74 RLHDSISEEGHHYLIFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA 151 (444)
T ss_dssp CEEEEEECSSEEEEEECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCC
T ss_pred eEEEEEEECCEEEEEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCc
Confidence 999999999999999999999999998854 467999999999999999999999999999999999999986555789
Q ss_pred eEEEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+||+|||+|....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+....+..+..+...
T Consensus 152 vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 231 (444)
T 3soa_A 152 VKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231 (444)
T ss_dssp EEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred EEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC
Confidence 9999999998765433 3356789999999999876 4689999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 407 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~ 407 (574)
++.+.|+.+|+++.+||.+||+.||.+|||+.++|+||||+..............+..+++|....+++..++..+.
T Consensus 232 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~ 308 (444)
T 3soa_A 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVML 308 (444)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEEC
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999998754333333445678889999888888887766553
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-54 Score=440.65 Aligned_cols=300 Identities=30% Similarity=0.608 Sum_probs=259.7
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
...+.++|++.+.||+|+||.||+|.++.+|+.||||++..... .....+.+.+|+.+++.| +|||
T Consensus 24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------~~~~~~~~~~E~~il~~l-~hpn 89 (362)
T 2bdw_A 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-------------SARDFQKLEREARICRKL-QHPN 89 (362)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CHHHHHHHHHHHHHHHHC-CCTT
T ss_pred CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-------------CHHHHHHHHHHHHHHHhC-CCCC
Confidence 34566789999999999999999999999999999999976421 123456788999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.+.+.+|+|||||+||+|.+.+. ....+++..+..++.||+.||.|||++||+||||||+|||++..+.+
T Consensus 90 Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~ 167 (362)
T 2bdw_A 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKG 167 (362)
T ss_dssp BCCEEEEEECSSEEEEEECCCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTT
T ss_pred CCeEEEEEEeCCEEEEEEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCC
Confidence 9999999999999999999999999999884 34679999999999999999999999999999999999999865556
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
+.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+...++..+..+..
T Consensus 168 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~ 247 (362)
T 2bdw_A 168 AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 247 (362)
T ss_dssp CCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred CCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence 7899999999988776666667899999999999876 468899999999999999999999999998889999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhh
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 406 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~ 406 (574)
.++...|+.+++++.+||.+||..||.+|||+.++|+||||...............+..++.|....+++..++..+
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 324 (362)
T 2bdw_A 248 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM 324 (362)
T ss_dssp CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777788899999999999999999999999999999999864332223334456778888888777777665543
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-54 Score=436.79 Aligned_cols=254 Identities=24% Similarity=0.309 Sum_probs=212.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCC-----CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|++++.||+|+||+||+|.+..+ ++.||||.+.... .....+.+.+|+.+|.++.+||
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--------------~~~~~~~~~~E~~il~~l~hhp 128 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--------------THSEHRALMSELKILIHIGHHL 128 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--------------ChHHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999987654 3689999987542 1234567899999999997679
Q ss_pred CcceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 170 NVVKFYNAFED-DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 170 niv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
|||+++++|.. ++.+|||||||++|+|.++|.... ...+++..+..++.||+.||.|||+++|||
T Consensus 129 nIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiH 208 (353)
T 4ase_A 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 208 (353)
T ss_dssp TBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeec
Confidence 99999999965 567999999999999999986532 245899999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||+|+.+..... ....+||+.|||||++.+ .++.++|||||||+||||+| |+
T Consensus 209 RDLK~~NILl~---~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 209 RDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp SCCSGGGEEEC---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred CccCccceeeC---CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 99999999998 478999999999987654332 245689999999998864 57899999999999999998 99
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.||.+....+.+..++......+. .+.+|+++.+||.+||+.||.+|||+.++++|
T Consensus 286 ~Pf~~~~~~~~~~~~i~~g~~~~~--p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 286 SPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 999887655555544443332222 24578999999999999999999999999886
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-52 Score=427.89 Aligned_cols=270 Identities=35% Similarity=0.598 Sum_probs=236.7
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++++.||+|+||.||+|+++.+|+.||||++.+.... ........+.+.+|+.+|+.+ +||||
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~---------~~~~~~~~~~~~~E~~il~~l-~hpnI 77 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSR---------ASRRGVCREEIEREVSILRQV-LHPNI 77 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSST---------TCSSSBCHHHHHHHHHHHTTC-CCTTB
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccc---------cccchhHHHHHHHHHHHHHhC-CCcCC
Confidence 34667899999999999999999999999999999999875211 000112356789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-CC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-ED 250 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~-~~ 250 (574)
++++++|.+.+.+|+|||||+||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++..+ ..
T Consensus 78 v~l~~~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~ 155 (361)
T 2yab_A 78 ITLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPI 155 (361)
T ss_dssp CCEEEEEECSSEEEEEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSS
T ss_pred CcEEEEEEeCCEEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCc
Confidence 999999999999999999999999999883 456799999999999999999999999999999999999998421 11
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
..+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 156 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~ 235 (361)
T 2yab_A 156 PHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235 (361)
T ss_dssp CCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC
T ss_pred cCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence 2799999999988776666677899999999999876 568899999999999999999999999999999999988877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.++...|+.+|+.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 77666678899999999999999999999999999999999854
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-52 Score=419.72 Aligned_cols=257 Identities=35% Similarity=0.631 Sum_probs=230.1
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|++..+|+.||||++.+.. ......+.+.+|+.+|+.+ +||||+++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hpnIv~l 79 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-------------LNPTSLQKLFREVRIMKIL-NHPNIVKL 79 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-------------SCHHHHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc-------------CCHHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence 457999999999999999999999999999999997642 1223456788999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+|+||||++||+|.+++... +++++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 80 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~---~~~~~k 154 (328)
T 3fe3_A 80 FEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIK 154 (328)
T ss_dssp EEEEECSSEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEE
T ss_pred EEEEEECCEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc---CCCCEE
Confidence 99999999999999999999999988544 6799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++............+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+.+.......+..+...++
T Consensus 155 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p 234 (328)
T 3fe3_A 155 IADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234 (328)
T ss_dssp ECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 99999998877666667789999999999987654 4689999999999999999999999998888888888765543
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 235 ----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 235 ----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp ----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred ----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 35789999999999999999999999999999998654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-52 Score=428.57 Aligned_cols=302 Identities=30% Similarity=0.559 Sum_probs=242.8
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.++.+|+.||||++...... .......+.+.+|+.+++.+ +||||+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~~~~~E~~~l~~l-~hpnIv 89 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT----------SSPGLSTEDLKREASICHML-KHPHIV 89 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------TSSSCCHHHHHHHHHHHHHC-CCTTBC
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcc----------ccccchHHHHHHHHHHHHhC-CCCCCC
Confidence 3567899999999999999999999999999999998754210 01112356789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
++++++.+.+.+|+|||||+||+|.+.+.... ...+++..+..++.||+.||.|||++||+||||||+|||++..+..
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~ 169 (351)
T 3c0i_A 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169 (351)
T ss_dssp CEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTT
T ss_pred cEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCC
Confidence 99999999999999999999999988875432 3468999999999999999999999999999999999999865455
Q ss_pred CCeEEEeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 251 SSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
..+||+|||++........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+. ....+..+..+.
T Consensus 170 ~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~ 248 (351)
T 3c0i_A 170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGK 248 (351)
T ss_dssp CCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTC
T ss_pred CcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCC
Confidence 6799999999987654332 3456899999999998754 688999999999999999999999774 456777777776
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhh
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 406 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~ 406 (574)
..+....|+.+++++.+||.+||..||.+|||+.++|+||||++.............+..++.+....+++...+..+
T Consensus 249 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 326 (351)
T 3c0i_A 249 YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAV 326 (351)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC---------
T ss_pred CCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665555567899999999999999999999999999999999875422222222345667777777777776665544
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=421.35 Aligned_cols=292 Identities=36% Similarity=0.635 Sum_probs=232.4
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+.+.++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+.+++.+ +||||
T Consensus 49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~E~~~l~~l-~h~ni 110 (349)
T 2w4o_A 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----------------DKKIVRTEIGVLLRL-SHPNI 110 (349)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------------------CHHHHHC-CCTTB
T ss_pred ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----------------hHHHHHHHHHHHHhC-CCCCC
Confidence 456778999999999999999999999999999999987541 234577899999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.+.+.+++||||++||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++..+.++
T Consensus 111 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~ 188 (349)
T 2w4o_A 111 IKLKEIFETPTEISLVLELVTGGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDA 188 (349)
T ss_dssp CCEEEEEECSSEEEEEECCCCSCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTC
T ss_pred cceeeeEecCCeEEEEEEeCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCC
Confidence 999999999999999999999999999884 346799999999999999999999999999999999999998544578
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~ 329 (574)
.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..... .+..+.....
T Consensus 189 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~ 268 (349)
T 2w4o_A 189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268 (349)
T ss_dssp CEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC
T ss_pred CEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC
Confidence 999999999987765555566789999999999876 46889999999999999999999998766554 6667777766
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhh
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRA 405 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~ 405 (574)
.+..+.++.++.++.+||.+||..||.+|||+.++|+||||+....... ........++.+....++++.....
T Consensus 269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (349)
T 2w4o_A 269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFV--HMDTAQKKLQEFNARRKLKAAVKAV 342 (349)
T ss_dssp CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCS--CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccchh--hhcchHHHHHHHHHHHHHHHHHHHH
Confidence 6666667889999999999999999999999999999999987543322 2234566778887777777766544
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-52 Score=420.53 Aligned_cols=263 Identities=29% Similarity=0.548 Sum_probs=236.0
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|.+.... .....+.+|+.+++.+ +||||+
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----------------~~~~~~~~E~~~l~~l-~hpnIv 64 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----------------TDQVLVKKEISILNIA-RHRNIL 64 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----------------HHHHHHHHHHHHHHHS-CCTTBC
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----------------ccHHHHHHHHHHHHhC-CCCCCC
Confidence 35678999999999999999999999999999999986541 2345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+|+|||||+||+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.. .++.
T Consensus 65 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~ 142 (321)
T 1tki_A 65 HLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSST 142 (321)
T ss_dssp CEEEEEEETTEEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCC
T ss_pred eEeEEEecCCEEEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCC
Confidence 999999999999999999999999998743 23579999999999999999999999999999999999999842 2689
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||++............+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+....+..+......+
T Consensus 143 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~ 222 (321)
T 1tki_A 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF 222 (321)
T ss_dssp EEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC
T ss_pred EEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC
Confidence 999999999987766666678899999999998766 4889999999999999999999999999999999999888777
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+...|+.+|+++.+||.+||..||.+|||+.++|+||||++..
T Consensus 223 ~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 7666788999999999999999999999999999999998754
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-52 Score=427.33 Aligned_cols=258 Identities=33% Similarity=0.518 Sum_probs=205.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|+++.+|+.||||++.... ...+.+.+|+.+++.+ +||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~hpniv~~ 81 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA----------------AIDENVQREIINHRSL-RHPNIVRF 81 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST----------------TSCHHHHHHHHHHHHC-CCTTBCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc----------------cccHHHHHHHHHHHhC-CCCCCCcE
Confidence 368999999999999999999999999999999987541 1235678999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+|+|||||+||+|.+++... +++++..++.++.||+.||.|||++||+||||||+|||++.. ..+.+|
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~k 158 (361)
T 3uc3_A 82 KEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLK 158 (361)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEE
T ss_pred EEEEeeCCEEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEE
Confidence 99999999999999999999999988543 579999999999999999999999999999999999999841 234599
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcC-CC-CCcchHhHHHHHHHHHhCCCCCCCCCh----hHHHHHHHhCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SG-PESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNK 328 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~-~~~DvwSlG~il~elltg~~Pf~~~~~----~~~~~~i~~~~ 328 (574)
|+|||+|+...........+||+.|+|||++.+. ++ .++|||||||++|+|++|+.||.+... ......+....
T Consensus 159 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~ 238 (361)
T 3uc3_A 159 ICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238 (361)
T ss_dssp ECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC
T ss_pred EeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC
Confidence 9999999865444445567899999999998654 33 348999999999999999999977544 23444454443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+ +....+++++.+||.+||..||.+|||+.++++||||....
T Consensus 239 ~~~--~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 239 YSI--PDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp CCC--CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred CCC--CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 332 23346899999999999999999999999999999997643
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-51 Score=422.41 Aligned_cols=257 Identities=29% Similarity=0.537 Sum_probs=223.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+.... .....+.+.+|..+++.+.+||||++++
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~------------~~~~~~~~~~E~~il~~~~~hp~Iv~l~ 90 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL------------QDDDVECTMTEKRILSLARNHPFLTQLF 90 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH------------HHTTHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc------------chhHHHHHHHHHHHHHhccCCCceeeEE
Confidence 5799999999999999999999999999999999765211 1234567889999999987799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 91 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---~~g~ikL 165 (353)
T 3txo_A 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKL 165 (353)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---CCCCEEE
Confidence 9999999999999999999999988543 6799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+++..+......++
T Consensus 166 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p- 244 (353)
T 3txo_A 166 ADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP- 244 (353)
T ss_dssp CCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-
T ss_pred ccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence 9999998643 2334456799999999998865 478899999999999999999999999999999999998876554
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCH------HHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~------~~~l~hp~~~~~ 373 (574)
..+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 245 ---~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 245 ---TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred ---CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 3478999999999999999999998 899999999874
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-51 Score=413.67 Aligned_cols=256 Identities=30% Similarity=0.528 Sum_probs=226.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+.... .....+.+.+|+.+|+.+ +||||++++
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~E~~~l~~l-~hp~iv~l~ 71 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII------------AKDEVAHTVTESRVLQNT-RHPFLTALK 71 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHSC-CCTTBCCEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh------------hhhHHHHHHHHHHHHHhC-CCCcCcceE
Confidence 4799999999999999999999999999999999764211 122456788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 72 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL 146 (337)
T 1o6l_A 72 YAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKI 146 (337)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC---CCCCEEE
Confidence 999999999999999999999988854 35799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccC-CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+...++..+......++
T Consensus 147 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p- 225 (337)
T 1o6l_A 147 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP- 225 (337)
T ss_dssp CCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-
T ss_pred eeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence 9999998643 33445677999999999998654 68899999999999999999999999988888888888765544
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
..+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 226 ---~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 226 ---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ---CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 35889999999999999999999 99999999999864
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=421.34 Aligned_cols=257 Identities=25% Similarity=0.481 Sum_probs=220.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+++.||||++.+... ......+.+..|..++.++.+||||++++
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~------------~~~~~~~~~~~E~~il~~~~~hp~Iv~l~ 119 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV------------NDDEDIDWVQTEKHVFEQASNHPFLVGLH 119 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGT------------C----CCHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc------------cCHHHHHHHHHHHHHHHhcCCCCCcCeeE
Confidence 579999999999999999999999999999999987521 11123345788999999886799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+.+.+|+|||||+||+|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 120 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL 194 (396)
T 4dc2_A 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKL 194 (396)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEECCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC---CCCCEEE
Confidence 9999999999999999999999988543 6799999999999999999999999999999999999998 4789999
Q ss_pred Eeeccccc-cCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCC---------ChhHHHHHH
Q 008197 256 TDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEV 324 (574)
Q Consensus 256 ~DFG~a~~-~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~---------~~~~~~~~i 324 (574)
+|||+|+. ..........+||+.|+|||++.+. ++.++|||||||++|+|++|++||... ....+...+
T Consensus 195 ~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i 274 (396)
T 4dc2_A 195 TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274 (396)
T ss_dssp CCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH
T ss_pred eecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH
Confidence 99999986 3344556678999999999998764 588999999999999999999999642 233456667
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCH------HHHhcCcccccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 373 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~------~~~l~hp~~~~~ 373 (574)
......++ +.+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 275 ~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 275 LEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp HHCCCCCC----TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred hccccCCC----CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 76655444 4589999999999999999999985 799999999864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-51 Score=412.12 Aligned_cols=269 Identities=36% Similarity=0.619 Sum_probs=233.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|.+.+.||+|+||.||+|.++.+|+.||||++.+.... ........+.+.+|+.+|+.+ +||||+
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------~~~~~~~~~~~~~E~~~l~~l-~hp~iv 77 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK---------SSRRGVSREDIEREVSILKEI-QHPNVI 77 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCST---------TCSSSBCHHHHHHHHHHHHHC-CCTTBC
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccc---------cccchhhHHHHHHHHHHHHhC-CCCCCC
Confidence 4567899999999999999999999999999999999765210 001112356789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-CCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDS 251 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~-~~~ 251 (574)
++++++.+.+.+|+||||++||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++..+ ...
T Consensus 78 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 78 TLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSC
T ss_pred cEEEEEEeCCEEEEEEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCC
Confidence 99999999999999999999999999883 446799999999999999999999999999999999999998422 223
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+.+..+......
T Consensus 156 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 235 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235 (326)
T ss_dssp CEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCC
T ss_pred CEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCC
Confidence 899999999988765555667789999999999875 4688999999999999999999999998888888888877666
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
++...++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 6555567789999999999999999999999999999999864
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=401.89 Aligned_cols=266 Identities=34% Similarity=0.660 Sum_probs=226.5
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
...+.++|.+.+.||+|+||.||+|.+..+|..||+|++.... .....+.+.+|+.+++.+ +|||
T Consensus 17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~hp~ 81 (285)
T 3is5_A 17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--------------SQVPMEQIEAEIEVLKSL-DHPN 81 (285)
T ss_dssp SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--------------CCSCHHHHHHHHHHHHTC-CCTT
T ss_pred CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--------------cchhHHHHHHHHHHHHhC-CCch
Confidence 3456679999999999999999999999999999999987642 122456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
|+++++++.+.+.+|+||||+++|+|.+.+... ....+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 82 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~ 161 (285)
T 3is5_A 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161 (285)
T ss_dssp BCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS
T ss_pred HHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC
Confidence 999999999999999999999999999988543 346799999999999999999999999999999999999997544
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
.++.+||+|||++............+||+.|+|||++.+.++.++|||||||++|+|++|+.||.+.........+....
T Consensus 162 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~ 241 (285)
T 3is5_A 162 PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE 241 (285)
T ss_dssp TTCCEEECCCCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred CCCCEEEEeeecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCC
Confidence 57889999999998776655556778999999999998888999999999999999999999999988877777776665
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
..+... ...+++.+.+||.+||..||.+|||+.++|+||||++
T Consensus 242 ~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 242 PNYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred cccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 544332 2357899999999999999999999999999999986
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=413.58 Aligned_cols=257 Identities=28% Similarity=0.495 Sum_probs=226.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||.||+|+++.+|+.||||++.+.... .....+.+..|..++..+.+||||++++
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~E~~il~~~~~hp~iv~l~ 84 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL------------MDDDVECTMVEKRVLSLAWEHPFLTHMF 84 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh------------hhhhHHHHHHHHHHHHhcCCCCCCCcEE
Confidence 5799999999999999999999999999999999765211 1123556788999998876799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 85 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL 159 (345)
T 1xjd_A 85 CTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKI 159 (345)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---CCCCEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+.... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+...++..+......++
T Consensus 160 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p- 238 (345)
T 1xjd_A 160 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP- 238 (345)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-
T ss_pred eEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC-
Confidence 99999986432 3345677999999999998764 68899999999999999999999999998889998888765543
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHH-HHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~-~~l~hp~~~~~ 373 (574)
..+++++.+||.+||..||.+||++. ++++||||+..
T Consensus 239 ---~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 239 ---RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred ---cccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 35889999999999999999999998 99999999864
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-51 Score=426.31 Aligned_cols=259 Identities=27% Similarity=0.471 Sum_probs=226.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+++.||||++.+..... ....+.+.+|+.+++.+ +||||++++
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~------------~~~~~~~~~E~~il~~l-~hp~Iv~l~ 135 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK------------RSDSAFFWEERDIMAFA-NSPWVVQLF 135 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH------------TCCCSTHHHHHHHHHHC-CCTTBCCEE
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh------------hHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 57999999999999999999999999999999997642110 11223477899999999 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+.+.+|||||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 136 ~~~~~~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL 209 (410)
T 3v8s_A 136 YAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKL 209 (410)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred EEEEECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC---CCCCEEE
Confidence 999999999999999999999998743 4689999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhcC-----CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-----~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||+|....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|++||.+.+....+..++...
T Consensus 210 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 289 (410)
T 3v8s_A 210 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289 (410)
T ss_dssp CCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred eccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc
Confidence 9999998765443 23467999999999998653 4688999999999999999999999999989999988765
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
..+..+.++.+|+++++||.+||+.+|.+ ||++.++++||||+..
T Consensus 290 ~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 290 NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 44444455679999999999999999988 9999999999999874
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-50 Score=397.99 Aligned_cols=267 Identities=32% Similarity=0.668 Sum_probs=238.9
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++.+ +||||+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~i~ 68 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-------------SARDFQKLEREARICRKL-QHPNIV 68 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-------------CHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-------------CHHHHHHHHHHHHHHHHc-CCCCcC
Confidence 356789999999999999999999999999999999876421 223456788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++...+..++||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++..+..+.
T Consensus 69 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~ 146 (284)
T 3kk8_A 69 RLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 146 (284)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCC
T ss_pred eEEEEEEcCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCc
Confidence 9999999999999999999999999988554 56999999999999999999999999999999999999986555667
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||++.............||+.|+|||++.+. ++.++||||||+++|+|++|+.||.+.........+..+...+
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 226 (284)
T 3kk8_A 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226 (284)
T ss_dssp EEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred EEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC
Confidence 999999999877666666677899999999998765 5889999999999999999999999999888898988888777
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+.+.+..+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (284)
T 3kk8_A 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER 270 (284)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChh
Confidence 77777889999999999999999999999999999999987543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-51 Score=410.31 Aligned_cols=247 Identities=23% Similarity=0.284 Sum_probs=188.7
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|.+.+.||+|+||+||+|++ +|+.||||++.... ........|+.++..+ +|||||++
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----------------~~~~~~e~Ei~~~~~l-~HpNIv~l 62 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----------------ERSWFREAEIYQTVML-RHENILGF 62 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----------------HHHHHHHHHHHTSTTC-CCTTBCCE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----------------hhhHHHHHHHHHHhcC-CCCCCCcE
Confidence 35799999999999999999986 68999999986541 1112234566666677 59999999
Q ss_pred EEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeecCCCCcE
Q 008197 175 YNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENF 242 (574)
Q Consensus 175 ~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~iiHrDlkp~Ni 242 (574)
++++..++ .+|||||||+||+|.+++.. .++++..+..++.|++.||.|||++ +||||||||+||
T Consensus 63 ~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NI 139 (303)
T 3hmm_A 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139 (303)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGE
T ss_pred EEEEEecCCCceEEEEEecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccE
Confidence 99997643 68999999999999998843 4689999999999999999999987 999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCCC-----ccccccCccccchHhhhcC-------CCCCcchHhHHHHHHHHHhCCC
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRR 310 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~DvwSlG~il~elltg~~ 310 (574)
||+ .++.+||+|||+|+....... ....+||+.|||||++.+. ++.++|||||||+||||+||.+
T Consensus 140 Ll~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~ 216 (303)
T 3hmm_A 140 LVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216 (303)
T ss_dssp EEC---TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred EEC---CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCC
Confidence 998 478999999999987654332 2346899999999999754 3568999999999999999987
Q ss_pred CCCCC---------------ChhHHHHHHHhCCCCCCCCC-C--CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 311 PFWDK---------------TEDGIFKEVLRNKPDFRRKP-W--PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 311 Pf~~~---------------~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
||... ....+...+.........+. + ...++.+.+|+.+||..||.+|||+.++++
T Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 66321 11223333333322111110 1 112346789999999999999999999875
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-50 Score=415.52 Aligned_cols=265 Identities=35% Similarity=0.594 Sum_probs=234.7
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.++.+|+.||+|++.... ......+.+|+.+|+.+ +||||+
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---------------~~~~~~~~~E~~il~~l-~hpnIv 111 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---------------PLDKYTVKNEISIMNQL-HHPKLI 111 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---------------HHHHHHHHHHHHHHTTC-CSTTBC
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---------------hhhHHHHHHHHHHHHhC-CCcCCC
Confidence 35578999999999999999999999999999999987541 12345688999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+|+|||||+||+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.. ..+.
T Consensus 112 ~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~ 189 (387)
T 1kob_A 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASS 189 (387)
T ss_dssp CEEEEEECSSEEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCC
T ss_pred eEEEEEEeCCEEEEEEEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCc
Confidence 999999999999999999999999987743 23479999999999999999999999999999999999999742 3578
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||+|............+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+......+..+......+
T Consensus 190 vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 269 (387)
T 1kob_A 190 VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269 (387)
T ss_dssp EEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCC
T ss_pred eEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 999999999887665555667899999999998764 5888999999999999999999999988888888888887777
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
....++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 77777889999999999999999999999999999999987543
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=405.40 Aligned_cols=254 Identities=27% Similarity=0.552 Sum_probs=225.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|+++.+|+.||||++.+.... .....+.+.+|+.+++.+ +||||++++
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~E~~~l~~l-~hp~Iv~~~ 72 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV------------RLKQVEHTNDERLMLSIV-THPFIIRMW 72 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHSC-CBTTBCCEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh------------hhhHHHHHHHHHHHHhhC-CCCCCceEe
Confidence 4799999999999999999999999999999999764211 112356788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 73 ~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL 147 (318)
T 1fot_A 73 GTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKI 147 (318)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc---CCCCEEE
Confidence 999999999999999999999998843 46799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||++..... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+....+..+......++
T Consensus 148 ~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p-- 223 (318)
T 1fot_A 148 TDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP-- 223 (318)
T ss_dssp CCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC--
T ss_pred eecCcceecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--
Confidence 99999987543 23457899999999998754 58899999999999999999999999988889999988765544
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 224 --~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 224 --PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp --TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred --CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 45789999999999999999999 99999999999864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=400.90 Aligned_cols=265 Identities=40% Similarity=0.755 Sum_probs=237.4
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.+++.+ +||||+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~~i~ 69 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF---------------VEDVDRFKQEIEIMKSL-DHPNII 69 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG---------------CSCHHHHHHHHHHHHTC-CCTTBC
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc---------------cchHHHHHHHHHHHHhC-CCCCEe
Confidence 45678999999999999999999999999999999987541 12356788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+|+||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||+...+.++.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~ 147 (277)
T 3f3z_A 70 RLYETFEDNTDIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP 147 (277)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCC
T ss_pred eEEEEEecCCeEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCc
Confidence 9999999999999999999999999988543 56999999999999999999999999999999999999954446789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+||+|||++.............||+.|+|||++.+.++.++|||||||++|+|++|+.||...........+..+...++
T Consensus 148 ~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 148 LKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP 227 (277)
T ss_dssp EEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EEEEecccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 99999999988776666667789999999999988889999999999999999999999999988888888888876666
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
...+..+++.+.+||.+||..||.+|||+.++|+||||++...
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence 5556678999999999999999999999999999999987543
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=412.24 Aligned_cols=257 Identities=25% Similarity=0.439 Sum_probs=226.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+.... .....+.+..|..++..+.+||||++++
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~------------~~~~~~~~~~E~~~l~~~~~hp~iv~l~ 87 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI------------QDDDVECTMVEKRVLALPGKPPFLTQLH 87 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh------------cchHHHHHHHHHHHHHhcCCCCEEeeEE
Confidence 4799999999999999999999999999999999765211 1124567889999998886799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 88 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL 162 (353)
T 2i0e_A 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKI 162 (353)
T ss_dssp EEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---CCCcEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|.... ........+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+..+++..+......++
T Consensus 163 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p- 241 (353)
T 2i0e_A 163 ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP- 241 (353)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-
T ss_pred EeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC-
Confidence 9999998643 3344567799999999999875 458899999999999999999999999999999999998766554
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+.+++++.+||.+||..||.+||+ +.++++||||+..
T Consensus 242 ---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 242 ---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp ---TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred ---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 468999999999999999999994 7999999999863
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-50 Score=409.21 Aligned_cols=278 Identities=27% Similarity=0.499 Sum_probs=239.1
Q ss_pred CCCCCCcccccccceeec-ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHH
Q 008197 84 KRTDFGYDKDFDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL 162 (574)
Q Consensus 84 ~~~~~~~~~~~~~~y~~~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il 162 (574)
....+...+.+.++|.+. +.||+|+||.||+|++..+|+.||||++..... .......+.+|+.++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~e~~~l 82 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-------------GQDCRAEILHEIAVL 82 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-------------TEECHHHHHHHHHHH
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-------------chHHHHHHHHHHHHH
Confidence 344555667788899998 899999999999999999999999999876421 112356788999999
Q ss_pred HHhcCCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 163 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 163 ~~l~~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
+.+.+||||+++++++.+.+.+|+||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+||
T Consensus 83 ~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NI 162 (327)
T 3lm5_A 83 ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNI 162 (327)
T ss_dssp HHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred HhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHE
Confidence 99987899999999999999999999999999999987555557899999999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHH
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~ 321 (574)
|++.....+.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+
T Consensus 163 l~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 242 (327)
T 3lm5_A 163 LLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242 (327)
T ss_dssp EESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 998544468999999999988766555566789999999999875 4588999999999999999999999999888888
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 322 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+......++...++.+++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 243 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~ 295 (327)
T 3lm5_A 243 LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295 (327)
T ss_dssp HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred HHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence 88888877777777788999999999999999999999999999999998754
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=413.58 Aligned_cols=260 Identities=35% Similarity=0.625 Sum_probs=226.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.++.+|+.||||++.+... ...+|+.++.++.+||||++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------------------~~~~E~~~l~~~~~hp~iv~ 80 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------------------DPTEEIEILLRYGQHPNIIT 80 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------------------CCHHHHHHHHHHTTSTTBCC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------------------ChHHHHHHHHHhcCCCCcCe
Confidence 55789999999999999999999999999999999976421 13478889988867999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-CCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSS 252 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~-~~~~ 252 (574)
+++++.+.+.+|+|||||+||+|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||+...+ ..+.
T Consensus 81 ~~~~~~~~~~~~lv~E~~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~ 158 (342)
T 2qr7_A 81 LKDVYDDGKYVYVVTELMKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158 (342)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGG
T ss_pred EEEEEEcCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCe
Confidence 9999999999999999999999999884 346799999999999999999999999999999999999996422 2246
Q ss_pred eEEEeeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCC---CChhHHHHHHHhC
Q 008197 253 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEVLRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~---~~~~~~~~~i~~~ 327 (574)
+||+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|..||.+ .+..+++..+..+
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~ 238 (342)
T 2qr7_A 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG 238 (342)
T ss_dssp EEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHC
T ss_pred EEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccC
Confidence 999999999876443 334567899999999998754 67899999999999999999999975 3556778888888
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
...+....|+.+|+++.+||.+||..||.+|||+.++++||||....
T Consensus 239 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~ 285 (342)
T 2qr7_A 239 KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285 (342)
T ss_dssp CCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGG
T ss_pred CcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCcc
Confidence 87777777889999999999999999999999999999999997643
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-50 Score=408.18 Aligned_cols=257 Identities=25% Similarity=0.474 Sum_probs=220.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+... ......+.+.+|+.+++.+.+||||++++
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~~~E~~~l~~~~~hp~iv~l~ 76 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV------------NDDEDIDWVQTEKHVFEQASNHPFLVGLH 76 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS------------CSHHHHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh------------cchHHHHHHHHHHHHHHhcCCCCccCeEE
Confidence 479999999999999999999999999999999976521 12234567889999999986799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 77 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL 151 (345)
T 3a8x_A 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKL 151 (345)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred Eeecccccc-CCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCC---------CChhHHHHHH
Q 008197 256 TDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD---------KTEDGIFKEV 324 (574)
Q Consensus 256 ~DFG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~---------~~~~~~~~~i 324 (574)
+|||+|+.. .........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.. .....+...+
T Consensus 152 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i 231 (345)
T 3a8x_A 152 TDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231 (345)
T ss_dssp CCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHH
T ss_pred EeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHH
Confidence 999999863 33344567799999999999876 458899999999999999999999965 2334456666
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCH------HHHhcCcccccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG 373 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~------~~~l~hp~~~~~ 373 (574)
......++ +.+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 232 ~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 232 LEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp HHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred HcCCCCCC----CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 66654443 3588999999999999999999995 899999999863
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-50 Score=418.29 Aligned_cols=263 Identities=30% Similarity=0.574 Sum_probs=217.8
Q ss_pred cccceeec-ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+.+.|.+. +.||.|+||+||+|.++.+|+.||||++... ..+.+|+.++.++.+||||+
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------------------~~~~~E~~~~~~~~~hp~iv 118 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------------PKARREVELHWRASQCPHIV 118 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------------------HHHHHHHHHHHHHTTSTTBC
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------------------hhHHHHHHHHHHhcCCCCcc
Confidence 34567776 7899999999999999999999999998643 24668898887766799999
Q ss_pred eEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 173 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 173 ~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++|.. ...+|||||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++...
T Consensus 119 ~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~ 198 (400)
T 1nxk_A 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 198 (400)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS
T ss_pred eEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC
Confidence 99999875 67899999999999999998655445799999999999999999999999999999999999999644
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----HHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKE 323 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~----~~~~~ 323 (574)
.++.+||+|||+++...........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... .....
T Consensus 199 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 278 (400)
T 1nxk_A 199 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278 (400)
T ss_dssp TTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH
T ss_pred CCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH
Confidence 478999999999987765555567799999999999864 5688999999999999999999999765432 35566
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
+..+...++...|..+++++.+||.+||..||.+|||+.++++||||......
T Consensus 279 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~~ 331 (400)
T 1nxk_A 279 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV 331 (400)
T ss_dssp HHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTTS
T ss_pred HHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCCC
Confidence 77777777777788899999999999999999999999999999999875443
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-50 Score=399.46 Aligned_cols=259 Identities=27% Similarity=0.484 Sum_probs=222.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++.+ +||||++
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~E~~~l~~l-~hp~iv~ 81 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---------------QPKKELIINEILVMREN-KNPNIVN 81 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG---------------CSCHHHHHHHHHHHHHC-CCTTBCC
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc---------------ccHHHHHHHHHHHHhcC-CCCCCCe
Confidence 3468999999999999999999999999999999986541 12345688999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++...+.+|+|||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~ 155 (297)
T 3fxz_A 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSV 155 (297)
T ss_dssp EEEEEEETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCE
T ss_pred EeEEEEECCEEEEEEECCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCE
Confidence 99999999999999999999999998743 3689999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.........+......
T Consensus 156 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~- 234 (297)
T 3fxz_A 156 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP- 234 (297)
T ss_dssp EECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-
T ss_pred EEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-
Confidence 999999998765432 34567899999999998654 588999999999999999999999888777666665544322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.....+.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 235 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 11223568899999999999999999999999999999987543
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-50 Score=408.14 Aligned_cols=254 Identities=28% Similarity=0.495 Sum_probs=225.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+.... .....+.+.+|+.+|+.+ +||||++++
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~E~~~l~~l-~hp~iv~~~ 107 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV------------KLKQIEHTLNEKRILQAV-NFPFLVKLE 107 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc------------cHHHHHHHHHHHHHHHhC-CCCCCCeEE
Confidence 5799999999999999999999999999999999765211 112456788999999999 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL 182 (350)
T 1rdq_E 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQV 182 (350)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC---CCCCEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||++...... ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+...++..+..+...++
T Consensus 183 ~DFg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p-- 258 (350)
T 1rdq_E 183 TDFGFAKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP-- 258 (350)
T ss_dssp CCCTTCEECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--
T ss_pred cccccceeccCC--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 999999876432 345689999999999865 458899999999999999999999999998889999988765544
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+.+++++.+||.+||+.||.+||+ +.++++||||+..
T Consensus 259 --~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 259 --SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp --TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred --CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 457899999999999999999998 9999999999863
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-50 Score=411.31 Aligned_cols=256 Identities=24% Similarity=0.483 Sum_probs=222.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|.+..+|+.||||++.+.... .......+.+|+.+|+.+ +|||||+++
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~------------~~~~~~~~~~E~~il~~l-~hp~Iv~l~ 81 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV------------ERNEVRNVFKELQIMQGL-EHPFLVNLW 81 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc------------cHHHHHHHHHHHHHHHhC-CCCCCCcEE
Confidence 5799999999999999999999999999999999765211 123456788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+.+.+|+||||+.||+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 82 ~~~~~~~~~~lv~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL 156 (384)
T 4fr4_A 82 YSFQDEEDMFMVVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHI 156 (384)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred EEEEeCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC---CCCCEEE
Confidence 99999999999999999999999884 456799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCC---ChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK---TEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~---~~~~~~~~i~~~~ 328 (574)
+|||+|............+||+.|+|||++.. .++.++|||||||++|+|++|+.||... ........+....
T Consensus 157 ~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~ 236 (384)
T 4fr4_A 157 TDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV 236 (384)
T ss_dssp CCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCC
T ss_pred eccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcc
Confidence 99999998776666778899999999999853 3688999999999999999999999754 3344555555544
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-HHHHhcCcccccc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-~~~~l~hp~~~~~ 373 (574)
..++ +.+++.+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 237 ~~~p----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 237 VTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp CCCC----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred cCCC----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 4333 457899999999999999999998 9999999999864
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-51 Score=413.61 Aligned_cols=257 Identities=34% Similarity=0.589 Sum_probs=219.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|.+.+.||+|+||.||+|.+..+|+.||||++.+.... .......+.+|+.+++.+ +||||++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~E~~~l~~l-~hpnIv~ 73 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK------------KSDMHMRVEREISYLKLL-RHPHIIK 73 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCSHHHHHHHHHHTTC-CCTTBCC
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc------------chhHHHHHHHHHHHHHhC-CCCCCCe
Confidence 346899999999999999999999999999999998764210 012235688999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+.+.+|+||||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 74 l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~ 147 (336)
T 3h4j_B 74 LYDVITTPTDIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNV 147 (336)
T ss_dssp EEEEEECSSEEEEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTCCE
T ss_pred EEEEEEeCCEEEEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCCCE
Confidence 999999999999999999 78999988654 5799999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||++............+||+.|+|||++.+.. ++++|||||||++|+|++|+.||.+.........+......
T Consensus 148 kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~- 226 (336)
T 3h4j_B 148 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV- 226 (336)
T ss_dssp EECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCC-
T ss_pred EEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC-
Confidence 999999998877666667789999999999987654 67899999999999999999999876554443333222211
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
..+.+|+++.+||.+||..||.+|||+.++++||||+..
T Consensus 227 ---~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 227 ---MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp ---CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred ---CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 124578999999999999999999999999999999864
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-50 Score=405.87 Aligned_cols=267 Identities=32% Similarity=0.610 Sum_probs=208.8
Q ss_pred cccceeec---ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~---~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
+.++|.+. +.||+|+||.||+|.++.+|+.||||++.+. ....+.+|+.+++.+.+|||
T Consensus 6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------------------~~~~~~~e~~~l~~l~~h~n 67 (325)
T 3kn6_A 6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------------------MEANTQKEITALKLCEGHPN 67 (325)
T ss_dssp HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------------------GHHHHHHHHHHHHHTTTCTT
T ss_pred chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------------------hhhhHHHHHHHHHHhcCCCC
Confidence 33567775 7899999999999999999999999998653 23467789999999977999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.+....|+||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++..+..
T Consensus 68 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~ 145 (325)
T 3kn6_A 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDN 145 (325)
T ss_dssp BCCEEEEEECSSEEEEEECCCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----
T ss_pred eeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCc
Confidence 99999999999999999999999999998854 4679999999999999999999999999999999999999854444
Q ss_pred CCeEEEeeccccccCCC-CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC-------hhHHH
Q 008197 251 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-------EDGIF 321 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~-------~~~~~ 321 (574)
..+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.. ..+..
T Consensus 146 ~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~ 225 (325)
T 3kn6_A 146 LEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM 225 (325)
T ss_dssp CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH
T ss_pred ccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH
Confidence 58999999999865433 33456789999999999865 46889999999999999999999997643 24566
Q ss_pred HHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCC
Q 008197 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380 (574)
Q Consensus 322 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~ 380 (574)
..+..+...+....|+.+++++.+||.+||..||.+|||+.++++||||+........+
T Consensus 226 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~ 284 (325)
T 3kn6_A 226 KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP 284 (325)
T ss_dssp HHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSC
T ss_pred HHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCC
Confidence 67766666666555677899999999999999999999999999999999876554433
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=422.19 Aligned_cols=262 Identities=26% Similarity=0.455 Sum_probs=224.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++++.||+|+||+||+|+++.+++.||||++.+..... ......+.+|+.++..+ +||||+++
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~------------~~~~~~~~~E~~il~~~-~hp~Iv~l 139 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK------------RAETACFREERDVLVNG-DSKWITTL 139 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH------------TTTTCCHHHHHHHHHHS-CTTTBCCE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh------------HHHHHHHHHHHHHHHhC-CCCCEEEE
Confidence 357999999999999999999999999999999997642211 11223478899999999 69999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++|.+.+.+|||||||+||+|.+++.. ....+++..++.++.||+.||.|||++|||||||||+|||++ .++.+|
T Consensus 140 ~~~~~~~~~~~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~---~~g~vk 215 (437)
T 4aw2_A 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIR 215 (437)
T ss_dssp EEEEECSSEEEEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEE
T ss_pred EEEEeeCCEEEEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc---CCCCEE
Confidence 9999999999999999999999998854 246799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
|+|||+|+....... ....+||+.|+|||++. +.++.++|||||||++|||++|++||.+.+..+.+..++.
T Consensus 216 L~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 295 (437)
T 4aw2_A 216 LADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295 (437)
T ss_dssp ECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred EcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh
Confidence 999999976644332 23468999999999986 3468899999999999999999999999998888888876
Q ss_pred CCCCCCCC-CCCCCCHHHHHHHHHccccCCCC--CCCHHHHhcCcccccc
Q 008197 327 NKPDFRRK-PWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~--Rps~~~~l~hp~~~~~ 373 (574)
....+..+ .++.+|+++++||.+||+.+|.+ ||++.++++||||+..
T Consensus 296 ~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 296 HKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred ccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 43222222 23568999999999999998888 9999999999999864
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-50 Score=403.14 Aligned_cols=268 Identities=36% Similarity=0.596 Sum_probs=219.8
Q ss_pred ccccccceeec-ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 91 DKDFDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 91 ~~~~~~~y~~~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
...+.++|++. +.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.++.++.+||
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~~~~h~ 71 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---------------GHIRSRVFREVEMLYQCQGHR 71 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---------------SCCHHHHHHHHHHHHHTCCCT
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---------------chhHHHHHHHHHHHHHhcCCC
Confidence 34566789995 78999999999999999999999999986541 123467889999999976799
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
||+++++++.+.+.+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++..+.
T Consensus 72 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~ 149 (316)
T 2ac3_A 72 NVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ 149 (316)
T ss_dssp TBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS
T ss_pred CeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC
Confidence 9999999999999999999999999999988544 57999999999999999999999999999999999999986444
Q ss_pred CCCeEEEeeccccccCCC--------CCccccccCccccchHhhhc------CCCCCcchHhHHHHHHHHHhCCCCCCCC
Q 008197 250 DSSLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDK 315 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~------~~~~~~DvwSlG~il~elltg~~Pf~~~ 315 (574)
...+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.
T Consensus 150 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp SCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 456999999998765321 12234579999999999863 4688999999999999999999999765
Q ss_pred Ch---------------hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 316 TE---------------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 316 ~~---------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.. ......+..+...++...++.+++.+.+||.+||..||.+|||+.++|+||||+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 230 CGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP 304 (316)
T ss_dssp CCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred ccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence 42 3356667666665554445678999999999999999999999999999999987543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=398.50 Aligned_cols=268 Identities=25% Similarity=0.343 Sum_probs=218.0
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHEN 170 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpn 170 (574)
.+.++|++.+.||+|+||.||+|++..+|+.||||++...... .........+.+|+.+++.+. +|||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~~~~~e~~~l~~l~~~~h~n 75 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGG----------GGGGGLPISTVREVALLRRLEAFEHPN 75 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCC----------TTSSCCCHHHHHHHHHHHHHHHHCCTT
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccc----------ccccccchhHHHHHHHHHHHhhcCCCC
Confidence 3457899999999999999999999999999999998754210 000111235667888777764 4999
Q ss_pred cceEEEEEEcCC-----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 171 VVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 171 iv~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
|+++++++.... .+++||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 76 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~ 154 (308)
T 3g33_A 76 VVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT 154 (308)
T ss_dssp BCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC
T ss_pred eEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc
Confidence 999999998755 6899999996 5999988665555699999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.++.+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+.......+
T Consensus 155 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 231 (308)
T 3g33_A 155 ---SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231 (308)
T ss_dssp ---TTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHH
T ss_pred ---CCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 478999999999988766666677899999999998854 5688999999999999999999999998888877777
Q ss_pred HhCCCCCCCCC-----------------------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 325 LRNKPDFRRKP-----------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 325 ~~~~~~~~~~~-----------------------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.......+... .+.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 232 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 65322222111 245788999999999999999999999999999999754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=399.20 Aligned_cols=264 Identities=27% Similarity=0.475 Sum_probs=217.0
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+.+.++|++++.||+|+||.||+|++. +|+.||||++..... .......+.+|+.+++.+ +|||
T Consensus 16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~hp~ 80 (311)
T 3niz_A 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-------------DEGIPSTAIREISLLKEL-HHPN 80 (311)
T ss_dssp EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------------------CHHHHHHHHHHHHHHC-CCTT
T ss_pred ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-------------cchhhHHHHHHHHHHHHc-CCCC
Confidence 3556789999999999999999999985 589999999875421 112346788999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.+++.+++||||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~ 155 (311)
T 3niz_A 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SD 155 (311)
T ss_dssp BCCEEEEECCSSCEEEEEECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TT
T ss_pred EeeeeeEEccCCEEEEEEcCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CC
Confidence 99999999999999999999974 88877754 345699999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 251 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+.+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+...
T Consensus 156 ~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~ 235 (311)
T 3niz_A 156 GALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235 (311)
T ss_dssp CCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHH
T ss_pred CCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 89999999999876432 33445689999999999865 4688999999999999999999999888777666665442
Q ss_pred CCCCCCCC--------------------------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKP--------------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
........ .+.+++++.+||.+||+.||.+|||+.++|+||||++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 236 LGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred HCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 11111111 235678999999999999999999999999999999754
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=414.96 Aligned_cols=260 Identities=27% Similarity=0.472 Sum_probs=221.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+..... ....+.+.+|+.++..+ +||||++++
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~------------~~~~~~~~~E~~il~~~-~hp~Iv~l~ 127 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK------------RGEVSCFREERDVLVNG-DRRWITQLH 127 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH------------HGGGCCHHHHHHHHHHS-CTTTBCCEE
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh------------HHHHHHHHHHHHHHHhc-CCCCeeeEE
Confidence 57999999999999999999999999999999997642211 11234578899999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+.+.+|||||||+||+|.+++... ...+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 128 ~~~~~~~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld---~~g~vkL 203 (412)
T 2vd5_A 128 FAFQDENYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD---RCGHIRL 203 (412)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred EEEeeCCEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec---CCCCEEE
Confidence 9999999999999999999999988543 34799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhh--------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~--------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
+|||+|........ ....+||+.|+|||++. ..++.++|||||||++|||++|+.||.+.+..+.+..++
T Consensus 204 ~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~ 283 (412)
T 2vd5_A 204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283 (412)
T ss_dssp CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999987654332 23568999999999986 246889999999999999999999999999888888887
Q ss_pred hCCCCCCCC-CCCCCCHHHHHHHHHccccCCCCC---CCHHHHhcCcccccc
Q 008197 326 RNKPDFRRK-PWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVREG 373 (574)
Q Consensus 326 ~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R---ps~~~~l~hp~~~~~ 373 (574)
.....+..+ ....+|+++++||.+||+ +|.+| |++.++++||||+..
T Consensus 284 ~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 284 HYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp THHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred hcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 643222222 124689999999999999 99998 599999999999864
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-49 Score=407.88 Aligned_cols=257 Identities=27% Similarity=0.467 Sum_probs=216.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHH-HHhcCCCCcce
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKIL-QALAGHENVVK 173 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il-~~l~~hpniv~ 173 (574)
.++|++++.||+|+||.||+|+++.+++.||||++.+... ........+..|..++ +.+ +||||++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~------------~~~~~~~~~~~e~~~ll~~~-~hp~Iv~ 103 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAI------------LKKKEEKHIMSERNVLLKNV-KHPFLVG 103 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGB------------C-------------CCBCCC-CCTTBCC
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHh------------hhhHHHHHHHHHHHHHHHhC-CCCCCCC
Confidence 3579999999999999999999999999999999977522 1112334566777764 455 6999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++|.+.+.+|+||||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 104 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~i 178 (373)
T 2r5t_A 104 LHFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHI 178 (373)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCE
T ss_pred EEEEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCE
Confidence 99999999999999999999999998854 35799999999999999999999999999999999999998 47899
Q ss_pred EEEeecccccc-CCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||+++.. .........+||+.|+|||++.+. ++.++|||||||++|||++|..||.+.+..+++..++.....+
T Consensus 179 kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~ 258 (373)
T 2r5t_A 179 VLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 258 (373)
T ss_dssp EECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCC
T ss_pred EEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC
Confidence 99999999863 333445677999999999998764 6889999999999999999999999999989999998876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCH----HHHhcCcccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG 373 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~----~~~l~hp~~~~~ 373 (574)
+ +.+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 259 ~----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 259 K----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp C----SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred C----CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 3 4689999999999999999999986 699999999863
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=418.97 Aligned_cols=258 Identities=35% Similarity=0.606 Sum_probs=228.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|.+++.||+|+||.||+|++..+|+.||||++.+.... .....+.+.+|+.+++.+ +||||+++
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~------------~~~~~~~~~~Ei~~l~~l-~HpnIv~l 81 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR------------SLDVVGKIRREIQNLKLF-RHPHIIKL 81 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH------------HTTTHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc------------CHHHHHHHHHHHHHHHhC-CCCCCCcE
Confidence 35799999999999999999999999999999999764210 112356789999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+|+|||||+||+|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 82 ~~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---~~~~vk 156 (476)
T 2y94_A 82 YQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AHMNAK 156 (476)
T ss_dssp EEEEECSSEEEEEEECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---TTCCEE
T ss_pred EEEEEECCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---cCCCeE
Confidence 999999999999999999999999883 456799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++............+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+......+..+..+....+
T Consensus 157 L~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p 236 (476)
T 2y94_A 157 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP 236 (476)
T ss_dssp ECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC
T ss_pred EEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC
Confidence 99999998876666666789999999999998753 6789999999999999999999999888888888887654332
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 237 ----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 237 ----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp ----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred ----ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 35789999999999999999999999999999998653
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-49 Score=407.89 Aligned_cols=262 Identities=34% Similarity=0.628 Sum_probs=225.6
Q ss_pred cccceee--cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 94 FDRRYTI--GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 94 ~~~~y~~--~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+...|.+ .+.||+|+||.||+|.+..+|+.||||++..... ...+.+.+|+.+|+.| +||||
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---------------~~~~~~~~E~~~l~~l-~hpnI 148 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---------------KDKEEVKNEISVMNQL-DHANL 148 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH---------------HHHHHHHHHHHHHTTC-CCTTB
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---------------ccHHHHHHHHHHHHhC-CCCCC
Confidence 3445665 6789999999999999999999999999876421 2346788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.+.+.+||||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||+... ..+
T Consensus 149 v~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~ 226 (373)
T 2x4f_A 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR-DAK 226 (373)
T ss_dssp CCEEEEEECSSEEEEEEECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET-TTT
T ss_pred CeEEEEEEECCEEEEEEeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC-CCC
Confidence 99999999999999999999999999988543 3568999999999999999999999999999999999999531 467
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
.+||+|||++............+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+......+..+......
T Consensus 227 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~ 306 (373)
T 2x4f_A 227 QIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD 306 (373)
T ss_dssp EEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred cEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC
Confidence 8999999999987766666667899999999998754 578899999999999999999999999888888899888766
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
++...++.+++++.+||.+||..||.+|||+.++|+||||++.
T Consensus 307 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 6666677899999999999999999999999999999999864
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=399.22 Aligned_cols=258 Identities=25% Similarity=0.351 Sum_probs=212.3
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++.++||+|+||+||+|+++.+|+.||||++..... ..........|+..+..+.+||||
T Consensus 53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~e~~~~~~~~~h~~i 119 (311)
T 3p1a_A 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-------------GPKDRARKLAEVGSHEKVGQHPCC 119 (311)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-------------SHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-------------ChHHHHHHHHHHHHHHHhcCCCcE
Confidence 3456789999999999999999999999999999998765311 112334556677777776579999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++++|.+.+.+|+||||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++
T Consensus 120 v~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~---~~ 194 (311)
T 3p1a_A 120 VRLEQAWEEGGILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP---RG 194 (311)
T ss_dssp CCEEEEEEETTEEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECG---GG
T ss_pred EEEEEEEEeCCEEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC---CC
Confidence 99999999999999999999 67998887554 457999999999999999999999999999999999999984 78
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
.+||+|||++............+||+.|+|||++.+.++.++|||||||++|+|++|..||.+.. ....+.... .
T Consensus 195 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~--~ 269 (311)
T 3p1a_A 195 RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGY--L 269 (311)
T ss_dssp CEEECCCTTCEECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTC--C
T ss_pred CEEEccceeeeecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccC--C
Confidence 99999999998776555556678999999999999888999999999999999999987775532 233333322 1
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
+....+.+++++.+||.+||+.||.+|||+.++|+||||++
T Consensus 270 ~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 11223568899999999999999999999999999999985
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-49 Score=406.87 Aligned_cols=269 Identities=32% Similarity=0.645 Sum_probs=233.7
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|.+.+.||.|+||.||+|+++.+|+.||||++........ ........+.+.+|+.+++.+.+||||
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l~~hp~i 162 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLS-------PEQLEEVREATRRETHILRQVAGHPHI 162 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCC-------HHHHHHHHHHHHHHHHHHHHHTTCTTB
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccC-------HHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 3456789999999999999999999999999999999876421000 001123356788999999999669999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++...+..|+||||++|++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++ .++
T Consensus 163 v~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~---~~~ 237 (365)
T 2y7j_A 163 ITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNM 237 (365)
T ss_dssp CCEEEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTC
T ss_pred eEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCC
Confidence 99999999999999999999999999988543 5799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc-------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.+||+|||++..+.........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+
T Consensus 238 ~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i 317 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI 317 (365)
T ss_dssp CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 999999999988776666677899999999999863 3578899999999999999999999998888888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
..+...+..+.|+.+++.+.+||.+||..||.+|||+.++|+||||+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 887766665566788999999999999999999999999999999973
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-49 Score=392.67 Aligned_cols=265 Identities=41% Similarity=0.725 Sum_probs=235.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+.+|+.+++++ +||||++
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~i~~ 85 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-------------KNKDTSTILREVELLKKL-DHPNIMK 85 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-------------SSSCHHHHHHHHHHHHTC-CCTTBCC
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-------------chHHHHHHHHHHHHHHhc-cCCCccE
Confidence 44689999999999999999999999999999999875421 123456788999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++...+.+|+||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++..+....+
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~ 163 (287)
T 2wei_A 86 LFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDI 163 (287)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred EEEEEeCCCeEEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccE
Confidence 999999999999999999999999988544 579999999999999999999999999999999999999865556789
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
||+|||++.............||+.|+|||++.+.++.++||||||+++|+|++|..||.+.........+..+...+..
T Consensus 164 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 243 (287)
T 2wei_A 164 KIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL 243 (287)
T ss_dssp EECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS
T ss_pred EEeccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence 99999999877665555666899999999999988899999999999999999999999998888888888887766666
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+.+..+++++.+||.+||..||.+|||+.++|+||||++..
T Consensus 244 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 66678999999999999999999999999999999998643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=399.11 Aligned_cols=269 Identities=36% Similarity=0.598 Sum_probs=231.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|++..+|+.||||++...... ........+.+.+|+.+++.+ +||||+
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~~~~~E~~~l~~l-~h~~iv 78 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSR---------ASRRGVSREEIEREVSILRQV-LHHNVI 78 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSS---------SCSSSBCHHHHHHHHHHHHHC-CCTTBC
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccc---------ccccchhHHHHHHHHHHHHhC-CCCCcc
Confidence 4567899999999999999999999999999999999765210 000112356789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC-CC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-DS 251 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~-~~ 251 (574)
++++++.+.+.+|+||||++|++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++..+. ..
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 79 TLHDVYENRTDVVLILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSC
T ss_pred eEEEEEecCCEEEEEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcC
Confidence 99999999999999999999999999884 3467999999999999999999999999999999999999984211 12
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+....+....+......
T Consensus 157 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~ 236 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236 (321)
T ss_dssp CEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred CEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc
Confidence 799999999988766655667789999999999875 4588999999999999999999999998888888888876655
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
++...++.+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 237 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 237 FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 5444446789999999999999999999999999999999864
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-49 Score=391.70 Aligned_cols=259 Identities=24% Similarity=0.431 Sum_probs=214.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.+ +||||++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 67 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-------------DEGVPSSALREICLLKEL-KHKNIVRLH 67 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-------------STTHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-------------cCCcchHHHHHHHHHhcC-CCCCEeeEE
Confidence 479999999999999999999999999999999976421 123446788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+++||||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 68 ~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl 142 (292)
T 3o0g_A 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKL 142 (292)
T ss_dssp EEEEETTEEEEEEECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred eEEEeCCEEEEEEecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEE
Confidence 999999999999999975 66666543 346799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCC-CCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf-~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|..|| .+.........+.......
T Consensus 143 ~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~ 222 (292)
T 3o0g_A 143 ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222 (292)
T ss_dssp CCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCC
T ss_pred eecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 999999876432 334556899999999998653 588999999999999999888775 4455555555554421111
Q ss_pred CC-------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 332 RR-------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 332 ~~-------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.. ...+.+++.+.+||.+||+.||.+|||+.++|+||||++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred ChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 11 1123578899999999999999999999999999999864
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=405.76 Aligned_cols=265 Identities=23% Similarity=0.355 Sum_probs=221.3
Q ss_pred CCcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-
Q 008197 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA- 166 (574)
Q Consensus 88 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~- 166 (574)
+.....+.++|++.+.||+|+||.||+|++..+++.||||++.... .....+..|+.+++.+.
T Consensus 27 ~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~e~~~l~~l~~ 90 (360)
T 3llt_A 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK----------------KYTRSAKIEADILKKIQN 90 (360)
T ss_dssp CCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH----------------HHHHHHHHHHHHHHHTCC
T ss_pred eecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch----------------hhhhhhHHHHHHHHHhcc
Confidence 3344557789999999999999999999999999999999987531 23456778999999985
Q ss_pred ---CCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 167 ---GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 167 ---~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
+||||+++++++...+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 91 ~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 169 (360)
T 3llt_A 91 DDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENIL 169 (360)
T ss_dssp CSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred cCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEE
Confidence 4999999999999999999999999 999999987766667999999999999999999999999999999999999
Q ss_pred EccC----------------------CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHH
Q 008197 244 FKSA----------------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGV 300 (574)
Q Consensus 244 l~~~----------------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~ 300 (574)
++.. ...+.+||+|||+|..... .....+||+.|+|||++.+ .++.++|||||||
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 247 (360)
T 3llt_A 170 LDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGC 247 (360)
T ss_dssp ESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHH
T ss_pred EccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHH
Confidence 9731 1367899999999986543 2345689999999998865 5689999999999
Q ss_pred HHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC---------------------CCCC---------------------C
Q 008197 301 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR---------------------KPWP---------------------S 338 (574)
Q Consensus 301 il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~---------------------~~~~---------------------~ 338 (574)
++|+|++|+.||.+....+....+......++. ..|+ .
T Consensus 248 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 327 (360)
T 3llt_A 248 VLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII 327 (360)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHC
T ss_pred HHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccc
Confidence 999999999999888777666665443222211 0011 1
Q ss_pred CCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
.++.+.+||.+||+.||.+|||+.++|+||||+
T Consensus 328 ~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 328 KHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred hHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 236678999999999999999999999999996
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-49 Score=424.53 Aligned_cols=259 Identities=26% Similarity=0.462 Sum_probs=224.7
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|+++.+|+.||||++.+.... .......+.+|+.+|+.+ +||||+++
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~------------~~~~~~~~~~E~~iL~~l-~hp~Iv~l 249 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK------------KRKGEAMALNEKQILEKV-NSRFVVSL 249 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh------------hhHHHHHHHHHHHHHHHc-CCCCEeeE
Confidence 35799999999999999999999999999999999765221 112345688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+|+||||++||+|.+++.......+++..++.++.||+.||.|||++|||||||||+|||++ .++.+|
T Consensus 250 ~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld---~~g~vK 326 (576)
T 2acx_A 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIR 326 (576)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEE
T ss_pred EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe---CCCCeE
Confidence 99999999999999999999999988655445699999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC----hhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~----~~~~~~~i~~~~~ 329 (574)
|+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.. ...+...+.....
T Consensus 327 L~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~ 406 (576)
T 2acx_A 327 ISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE 406 (576)
T ss_dssp ECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC
T ss_pred EEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc
Confidence 999999988766666667799999999999876 46889999999999999999999997753 3445555555443
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
.++ ..+|+++.+||.+||+.||.+|| ++.++++||||+..
T Consensus 407 ~~p----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 407 EYS----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred cCC----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 332 46899999999999999999999 89999999999863
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-49 Score=396.83 Aligned_cols=261 Identities=26% Similarity=0.436 Sum_probs=206.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|.++.+|+.||||++..... ....+.+.+|+.+++.+ +||||++++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~hp~iv~~~ 69 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--------------EGTPSTAIREISLMKEL-KHENIVRLY 69 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCST--------------TCSCHHHHHHHHHHTTC-CBTTBCCEE
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--------------cccHHHHHHHHHHHHhc-CCCCcceEE
Confidence 479999999999999999999999999999999875411 12235678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++.+++.+|+||||++ |+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~ 145 (317)
T 2pmi_A 70 DVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRG 145 (317)
T ss_dssp EEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTC
T ss_pred EEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCC
Confidence 99999999999999997 59998885543 24589999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 252 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 146 ~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~ 225 (317)
T 2pmi_A 146 QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM 225 (317)
T ss_dssp CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred CEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 9999999999876432 33445689999999999865 46889999999999999999999999888877776665421
Q ss_pred CCCCCC------------------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 329 PDFRRK------------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 329 ~~~~~~------------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
...... ....+++++.+||.+||+.||.+|||+.++|+||||++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 110000 01246889999999999999999999999999999997643
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-49 Score=399.12 Aligned_cols=259 Identities=33% Similarity=0.590 Sum_probs=217.0
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||.||+|++..+++.||||++..... ....+.+.+|+.+++.+ +||||++
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~hpnIv~ 69 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--------------VDCPENIKKEICINKML-NHENVVK 69 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------------------CHHHHHHHHHHC-CCTTBCC
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--------------cchHHHHHHHHHHHHhC-CCCCCCe
Confidence 45689999999999999999999999999999999865421 11235678999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+.+..|+|||||+||+|.+++ .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~ 144 (323)
T 3tki_A 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNL 144 (323)
T ss_dssp EEEEEECSSEEEEEEECCTTEEGGGGS--BTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCE
T ss_pred EEEEEecCCeEEEEEEcCCCCcHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CCCCE
Confidence 999999999999999999999999877 3446799999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC---CCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhH-HHHHHHhC
Q 008197 254 KATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~ 327 (574)
||+|||++...... ......+||+.|+|||++.+.. +.++|||||||++|+|++|+.||....... .+......
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~ 224 (323)
T 3tki_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224 (323)
T ss_dssp EECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT
T ss_pred EEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc
Confidence 99999999765322 2234678999999999987643 568999999999999999999997765543 33333332
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
. .....+..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 225 ~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 225 K--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp C--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred c--ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 2 22334567899999999999999999999999999999998654
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=406.77 Aligned_cols=263 Identities=22% Similarity=0.307 Sum_probs=216.6
Q ss_pred cceeeccccccc--CCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 96 RRYTIGKLLGHG--QFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~lG~G--~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
++|++++.||+| +||.||+|+++.+|+.||||++.... ......+.+.+|+.+++.+ +|||||+
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~niv~ 90 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA-------------CSNEMVTFLQGELHVSKLF-NHPNIVP 90 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG-------------SCHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc-------------cChHHHHHHHHHHHHHHhC-CCCCCCc
Confidence 579999999999 99999999999999999999997642 1123456788999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+.+.+|+|||||++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~~~~ 167 (389)
T 3gni_B 91 YRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKV 167 (389)
T ss_dssp EEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCE
T ss_pred EeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCE
Confidence 999999999999999999999999998766567799999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCC--------CCccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 254 KATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 254 kl~DFG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+........
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 247 (389)
T 3gni_B 168 YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 247 (389)
T ss_dssp EECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH
T ss_pred EEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 99999988643211 12233589999999999876 46889999999999999999999998776655544
Q ss_pred HHHhCCCCC------------------------------------------CCCCCCCCCHHHHHHHHHccccCCCCCCC
Q 008197 323 EVLRNKPDF------------------------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLT 360 (574)
Q Consensus 323 ~i~~~~~~~------------------------------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps 360 (574)
.++.+.... ..+.+..+++.+.+||.+||+.||.+|||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 327 (389)
T 3gni_B 248 EKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327 (389)
T ss_dssp HC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCC
T ss_pred HHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCC
Confidence 433221110 00123457889999999999999999999
Q ss_pred HHHHhcCccccccCC
Q 008197 361 AAQALSHPWVREGGD 375 (574)
Q Consensus 361 ~~~~l~hp~~~~~~~ 375 (574)
+.++|+||||+....
T Consensus 328 a~ell~hp~f~~~~~ 342 (389)
T 3gni_B 328 ASTLLNHSFFKQIKR 342 (389)
T ss_dssp HHHHTTSGGGGGC--
T ss_pred HHHHhcCHHHHHHhh
Confidence 999999999997543
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=410.18 Aligned_cols=262 Identities=33% Similarity=0.501 Sum_probs=208.5
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++++.||+|+||.||+|.++.+|+.||||++.+.. ........+.+|+.+++.+.+||||+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-------------~~~~~~~~~~~E~~~l~~l~~h~niv 72 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-------------QNSTDAQRTFREIMILTELSGHENIV 72 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---------------CCHHHHHHHHHHHHHHHHTTTCTTBC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-------------cChHHHHHHHHHHHHHHhccCCCCCC
Confidence 35578999999999999999999999999999999986531 11234567889999999996799999
Q ss_pred eEEEEEEcCC--EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 173 KFYNAFEDDN--YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 173 ~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
++++++...+ .+|+|||||+ ++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++ .+
T Consensus 73 ~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~ 145 (388)
T 3oz6_A 73 NLLNVLRADNDRDVYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN---AE 145 (388)
T ss_dssp CEEEEEECTTSSCEEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TT
T ss_pred eeeeEEecCCCCEEEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc---CC
Confidence 9999997544 7999999997 588887743 4799999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCC----------------------CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHH
Q 008197 251 SSLKATDFGLSDFIKP----------------------GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL 306 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~----------------------~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~ell 306 (574)
+.+||+|||+|+.... .......+||++|+|||++.+ .++.++|||||||++|+|+
T Consensus 146 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell 225 (388)
T 3oz6_A 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225 (388)
T ss_dssp CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH
Confidence 8999999999976532 112345689999999999865 4688999999999999999
Q ss_pred hCCCCCCCCChhHHHHHHHhCCCCCC------------------------------C-------------CCCCCCCHHH
Q 008197 307 CGRRPFWDKTEDGIFKEVLRNKPDFR------------------------------R-------------KPWPSISNSA 343 (574)
Q Consensus 307 tg~~Pf~~~~~~~~~~~i~~~~~~~~------------------------------~-------------~~~~~~~~~~ 343 (574)
+|++||.+.+....+..++....... . .+...+++++
T Consensus 226 ~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (388)
T 3oz6_A 226 CGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305 (388)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHH
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHH
Confidence 99999999887777766653211000 0 0122678999
Q ss_pred HHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 344 KDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 344 ~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+||.+||+.||.+|||+.++|+||||+...
T Consensus 306 ~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 306 LDLLDKLLQFNPNKRISANDALKHPFVSIFH 336 (388)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred HHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence 9999999999999999999999999998643
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=392.40 Aligned_cols=264 Identities=40% Similarity=0.731 Sum_probs=230.7
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|.+.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+.+++.+ +||||+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~~e~~~l~~l-~h~~i~ 69 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---------------FRDSSLENEIAVLKKI-KHENIV 69 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------------------HHHHHHHHHHHC-CCTTBC
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---------------cchHHHHHHHHHHHhC-CCCCee
Confidence 355789999999999999999999999999999999875421 1234678999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+|+||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||++...+.++.
T Consensus 70 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~ 147 (304)
T 2jam_A 70 TLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSK 147 (304)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCC
T ss_pred ehhhhcccCCEEEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCC
Confidence 9999999999999999999999999988543 57999999999999999999999999999999999999954446789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+..+...+
T Consensus 148 ~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (304)
T 2jam_A 148 IMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF 226 (304)
T ss_dssp EEBCSCSTTCCCCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCC
T ss_pred EEEccCCcceecCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 999999999765432 23456799999999988654 5789999999999999999999999988888888888887777
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+...++.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence 76677889999999999999999999999999999999987543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-49 Score=390.90 Aligned_cols=258 Identities=28% Similarity=0.447 Sum_probs=211.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|++ .+|+.||||++..... .......+.+|+.+++.+ +||||++++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 66 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-------------DEGIPSTTIREISILKEL-KHSNIVKLY 66 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-------------GGCCCHHHHHHHHGGGGC-CCTTBCCEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-------------ccccchhHHHHHHHHHhc-CCCCEeeee
Confidence 4799999999999999999998 6789999999865421 112235678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||+++ +|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 67 ~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl 141 (288)
T 1ob3_A 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKI 141 (288)
T ss_dssp EEEECSSCEEEEEECCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEE
T ss_pred eEEccCCeEEEEEEecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEE
Confidence 999999999999999975 88887743 346799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+........
T Consensus 142 ~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (288)
T 1ob3_A 142 ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221 (288)
T ss_dssp CCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCC
Confidence 999999865432 23345689999999999865 368899999999999999999999998887776666654211100
Q ss_pred C-------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 333 R-------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 333 ~-------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
. ...+.+++++.+||.+||+.||.+|||+.++|+||||++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred hhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 0 0123578899999999999999999999999999999863
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-49 Score=417.72 Aligned_cols=271 Identities=36% Similarity=0.609 Sum_probs=216.7
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|.+.+.||+|+||.||+|.++.+++.||||++.+....... .........+.+|+.+|+++ +||||
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-------~~~~~~~~~~~~E~~~l~~l-~hpni 202 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS-------AREADPALNVETEIEILKKL-NHPCI 202 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC---------------CCHHHHHHHHHHC-CCTTB
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccc-------cccchhHHHHHHHHHHHHhC-CCCCE
Confidence 44667899999999999999999999999999999999765321100 00011223578999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.. +.+|+||||+++|+|.+++ .....+++..++.++.||+.||.|||++||+||||||+|||++..+.+.
T Consensus 203 v~l~~~~~~-~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 203 IKIKNFFDA-EDYYIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp CCCCEEEES-SEEEEEEECCTTCBGGGGT--SSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSC
T ss_pred eeEEEEEec-CceEEEEEcCCCCcHHHHH--hccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcc
Confidence 999999865 4589999999999999877 3456799999999999999999999999999999999999998655566
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~ 326 (574)
.+||+|||+|+...........+||+.|+|||++. ..++.++|||||||++|+|++|+.||...... .....+..
T Consensus 280 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~ 359 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359 (419)
T ss_dssp CEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred eEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence 79999999999876665566789999999999885 34567899999999999999999999765443 44555666
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+...+....|+.+++.+.+||.+||..||.+|||+.++|+||||++.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 55555545567789999999999999999999999999999999863
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=388.65 Aligned_cols=271 Identities=32% Similarity=0.606 Sum_probs=234.4
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.++.+|+.||||++....... .. ........+.+.+|+.+++++.+||||+
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~--~~~~~~~~~~~~~e~~~l~~l~~h~~i~ 87 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGS----FS--AEEVQELREATLKEVDILRKVSGHPNII 87 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTT----CC--HHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccc----cC--HHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 35578999999999999999999999999999999987542100 00 0011234567889999999996799999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~ 162 (298)
T 1phk_A 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMN 162 (298)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCC
T ss_pred eeeeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc---CCCc
Confidence 9999999999999999999999999988543 5799999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh-------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
+||+|||++............+||+.|+|||++. ..++.++|||||||++|+|++|+.||...........+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 242 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242 (298)
T ss_dssp EEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred EEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHh
Confidence 9999999998876666666778999999999875 235788999999999999999999999988888888888
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+...+..+.++.+++.+.+||.+||..||.+|||+.++++||||++..
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred cCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 8877776666778899999999999999999999999999999998653
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-49 Score=393.20 Aligned_cols=268 Identities=28% Similarity=0.521 Sum_probs=216.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhh-----------hhhccchhhHHHHHHHHHHHHH
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ-----------DLKMILPIAVEDVKREVKILQA 164 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~E~~il~~ 164 (574)
++|++.+.||+|+||.||+|++..+|+.||||++............. ..........+.+.+|+.+++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999997653211000000 0000001224568899999999
Q ss_pred hcCCCCcceEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 165 LAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 165 l~~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
+ +||||+++++++.+ .+.+|+||||+++++|.+.+ ...++++..+..++.||+.||.|||++||+||||||+||
T Consensus 93 l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 93 L-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168 (298)
T ss_dssp C-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred C-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 9 59999999999987 67899999999999997743 345799999999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCC-CccccccCccccchHhhhcCC----CCCcchHhHHHHHHHHHhCCCCCCCCCh
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTE 317 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~DvwSlG~il~elltg~~Pf~~~~~ 317 (574)
|++ .++.+||+|||++....... .....+||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+...
T Consensus 169 l~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 169 LVG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp EEC---TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEC---CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 998 47899999999998765432 234568999999999987543 5678999999999999999999998887
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
......+......++ ..+.+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus 246 ~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 246 MCLHSKIKSQALEFP--DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHHHHCCCCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHHhcccCCCC--CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 777777776654433 23578999999999999999999999999999999963
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-49 Score=417.81 Aligned_cols=261 Identities=29% Similarity=0.432 Sum_probs=196.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||.||+|+++.+|+.||||++.+.. ......+.+.+|+.+|+.+ +||||++
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~niv~ 116 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-------------EDLIDCKRILREIAILNRL-NHDHVVK 116 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-------------SSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-------------cCHHHHHHHHHHHHHHHhC-CCCCCCc
Confidence 4578999999999999999999999999999999986531 1123456789999999999 5999999
Q ss_pred EEEEEEc-----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFED-----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++.. ...+|+||||+ +++|.+++. ....+++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 117 l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~--- 190 (458)
T 3rp9_A 117 VLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN--- 190 (458)
T ss_dssp EEEECCCSCTTTCCCEEEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---
T ss_pred eEEEEecCCcccCceEEEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC---
Confidence 9999943 46799999998 578988773 446799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCC----------------------------CccccccCccccchHhhh--cCCCCCcchHhH
Q 008197 249 EDSSLKATDFGLSDFIKPGK----------------------------KFQDIVGSAYYVAPEVLK--RKSGPESDVWSI 298 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSl 298 (574)
.++.+||+|||+|+...... .....+||++|+|||++. ..++.++|||||
T Consensus 191 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSl 270 (458)
T 3rp9_A 191 QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270 (458)
T ss_dssp TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHH
Confidence 47899999999998754221 234568999999999763 347899999999
Q ss_pred HHHHHHHHh-----------CCCCCCCCCh--------------------hHHHHHHHh---------------------
Q 008197 299 GVITYILLC-----------GRRPFWDKTE--------------------DGIFKEVLR--------------------- 326 (574)
Q Consensus 299 G~il~ellt-----------g~~Pf~~~~~--------------------~~~~~~i~~--------------------- 326 (574)
|||+|||++ |++||.+... ...+..+..
T Consensus 271 G~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~ 350 (458)
T 3rp9_A 271 GCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRY 350 (458)
T ss_dssp HHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHH
T ss_pred HHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHH
Confidence 999999998 6777755431 111111111
Q ss_pred --CCCCC----CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 327 --NKPDF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 327 --~~~~~----~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+.. ....++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 351 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~ 404 (458)
T 3rp9_A 351 IRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR 404 (458)
T ss_dssp HTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence 00000 0112467799999999999999999999999999999999753
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=403.16 Aligned_cols=270 Identities=35% Similarity=0.632 Sum_probs=227.1
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.+... ........+.+.+|+.+++.+ +||||+
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~~~~~~~~E~~~l~~l-~hpniv 91 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI----------RQINPKDVERIKTEVRLMKKL-HHPNIA 91 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH----------HC---CHHHHHHHHHHHHHHC-CCTTBC
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhh----------cccCHHHHHHHHHHHHHHHhC-CCCCcc
Confidence 466789999999999999999999999999999999876421 111233557889999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhh--------------------------------------cCCCCCHHHHH
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAK--------------------------------------KDSRYTEKDAA 214 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--------------------------------------~~~~l~~~~~~ 214 (574)
++++++.+.+.+|+|||||+||+|.+++... ....+++..++
T Consensus 92 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (345)
T 3hko_A 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLIS 171 (345)
T ss_dssp CEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHH
T ss_pred eeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHH
Confidence 9999999999999999999999999877310 01224678899
Q ss_pred HHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCC-----CccccccCccccchHhhhc--
Q 008197 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-- 287 (574)
Q Consensus 215 ~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-- 287 (574)
.++.||+.||.|||++||+||||||+|||++.. ....+||+|||++....... ......||+.|+|||++.+
T Consensus 172 ~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 999999999999999999999999999999841 23489999999998653211 2345689999999999863
Q ss_pred -CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 288 -KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 288 -~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.++.++|||||||++|+|++|+.||.+.........+......+..+.++.+++.+.+||.+||..||.+|||+.++|+
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 4688999999999999999999999999988888899888877776666678999999999999999999999999999
Q ss_pred CccccccC
Q 008197 367 HPWVREGG 374 (574)
Q Consensus 367 hp~~~~~~ 374 (574)
||||++..
T Consensus 331 hp~~~~~~ 338 (345)
T 3hko_A 331 HPWISQFS 338 (345)
T ss_dssp SHHHHTTS
T ss_pred ChhhccCh
Confidence 99998754
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=395.13 Aligned_cols=258 Identities=28% Similarity=0.505 Sum_probs=213.9
Q ss_pred ccceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.++|++.+.||+|+||.||+|++. .+|+.||||++.+..... .......+.+|+.+|+.+ +||||
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~~~E~~~l~~l-~hp~i 83 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR-----------NAKDTAHTKAERNILEEV-KHPFI 83 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC-------------------------HHHHHHHC-CCTTB
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh-----------hhhHHHHHHHHHHHHHhC-CCCCc
Confidence 357999999999999999999985 689999999997652110 012345678899999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++...+.+|+||||++||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 84 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~ 158 (327)
T 3a62_A 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQG 158 (327)
T ss_dssp CCEEEEEECSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTS
T ss_pred cceeEEEEcCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCC
Confidence 99999999999999999999999999988543 5789999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~ 238 (327)
T 3a62_A 159 HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL 238 (327)
T ss_dssp CEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC
T ss_pred cEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence 999999999976432 233456789999999999865 468899999999999999999999999888888888888765
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
.++ +.+++++.+||.+||..||.+|| ++.++++||||+..
T Consensus 239 ~~p----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 239 NLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp CCC----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred CCC----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 443 46789999999999999999999 89999999999863
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=415.97 Aligned_cols=257 Identities=29% Similarity=0.513 Sum_probs=215.8
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++++.||+|+||.||+|++..+|+.||||++.+... ........+.+|+.+++.+ +||||+++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~iv~l 213 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVI------------VAKDEVAHTLTENRVLQNS-RHPFLTAL 213 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH------------C-------------CCCCC-SCTTSCCE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhh------------hhhHHHHHHHHHHHHHHhC-CCCeEeeE
Confidence 4679999999999999999999999999999999976421 1122345678899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCe
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++.+.+.+||||||++||+|.+++... ..+++..++.++.||+.||.|||+ .||+||||||+|||++ .++.+
T Consensus 214 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~ 288 (446)
T 4ejn_A 214 KYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHI 288 (446)
T ss_dssp EEEEEETTEEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCE
T ss_pred EEEEeeCCEEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCE
Confidence 99999999999999999999999888543 579999999999999999999998 9999999999999998 47899
Q ss_pred EEEeeccccccC-CCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||+|+... ........+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+......+
T Consensus 289 kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~ 368 (446)
T 4ejn_A 289 KITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368 (446)
T ss_dssp EECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred EEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 999999998643 3334456799999999999865 46889999999999999999999999998888888888876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+ +.+++++.+||.+||..||.+|| |+.++++||||+..
T Consensus 369 p----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 369 P----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp C----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred C----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 4 45789999999999999999999 99999999999864
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=399.65 Aligned_cols=260 Identities=28% Similarity=0.446 Sum_probs=222.1
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+...++|.+.+.||+|+||.||+|++..+|+.||||++..... ......+.+.+|+.+++.+ +||||
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hpni 116 (348)
T 1u5q_A 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK------------QSNEKWQDIIKEVRFLQKL-RHPNT 116 (348)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS------------CHHHHHHHHHHHHHHHHHC-CCTTB
T ss_pred cchhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc------------cchHHHHHHHHHHHHHHhC-CCCCE
Confidence 4455679999999999999999999999999999999875411 1123456788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++..++..|+||||+. |+|.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 117 v~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~ 191 (348)
T 1u5q_A 117 IQYRGCYLREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPG 191 (348)
T ss_dssp CCEEEEEEETTEEEEEEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTT
T ss_pred eeEEEEEEECCeEEEEEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCC
Confidence 999999999999999999997 6888877543 46799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.+||+|||++..... ....+||+.|+|||++. +.++.++|||||||++|+|++|+.||.+.........+...
T Consensus 192 ~~kL~DfG~a~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~ 268 (348)
T 1u5q_A 192 LVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 268 (348)
T ss_dssp EEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred CEEEeeccCceecCC---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence 999999999986543 23468999999999984 34688999999999999999999999888877777777665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..... ....+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 269 ~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 269 ESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 313 (348)
T ss_dssp CCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred CCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence 43222 2246789999999999999999999999999999998654
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-49 Score=410.37 Aligned_cols=319 Identities=27% Similarity=0.384 Sum_probs=223.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
....+|++.+.||+|+||.||+|++..++. ||+|++..... ...+|+.+++.+ +||||+
T Consensus 37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------------------~~~~E~~il~~l-~h~niv 95 (394)
T 4e7w_A 37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------------------FKNRELQIMRIV-KHPNVV 95 (394)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------------------SCCHHHHHHHTC-CCTTBC
T ss_pred cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------------------hHHHHHHHHHhC-CCCCcc
Confidence 345689999999999999999999877665 88888765310 123799999999 599999
Q ss_pred eEEEEEEcCC------EEEEEEeccCCCchHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 173 KFYNAFEDDN------YVYIAMELCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 173 ~~~~~~~~~~------~~~lv~e~~~gg~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
+++++|...+ .+++||||+++ ++...+. ......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill 174 (394)
T 4e7w_A 96 DLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174 (394)
T ss_dssp CEEEEEEEESSSSSCEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred eEEEEEEecCCCCCceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEE
Confidence 9999995433 48999999976 4444432 2235679999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
+. .++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+.
T Consensus 175 ~~--~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~ 252 (394)
T 4e7w_A 175 DP--PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252 (394)
T ss_dssp ET--TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred cC--CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 83 478999999999988766665667789999999999865 46899999999999999999999999988777666
Q ss_pred HHHhCC-----------------CCCC---CC-----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 323 EVLRNK-----------------PDFR---RK-----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 323 ~i~~~~-----------------~~~~---~~-----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
.++... ..++ .. ..+.+++++.+||.+||..||.+|||+.++++||||++.....
T Consensus 253 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 332 (394)
T 4e7w_A 253 EIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE 332 (394)
T ss_dssp HHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred HHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence 655421 0011 00 1234789999999999999999999999999999999764332
Q ss_pred CCCccHHHHHHHHhhhhhhh-hhHHHHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHH
Q 008197 378 EIPIDISVLNNMRQFVKYSR-LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQ 440 (574)
Q Consensus 378 ~~~~~~~~l~~l~~~~~~s~-l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~ 440 (574)
........+..+..+..... ....+...+ ++....+++.+ ..+|.|++|.++.+|+..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 391 (394)
T 4e7w_A 333 ARMPNGRELPPLFNWTKEELSVRPDLISRL---VPQHAEAELLS--RGIDVHNFQPIPLESLKV 391 (394)
T ss_dssp CCCTTSSCCCCSCCCCHHHHHTCGGGHHHH---SCGGGCSSSST--TSCCCC------------
T ss_pred ccCCCCCCCCCcCCCCHHHhhcCHHHHHhh---ccHhhhhhhhc--cCcccccCCCCCHHHhcc
Confidence 21111111111222221110 111111111 12222122222 567999999999998864
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-49 Score=400.08 Aligned_cols=262 Identities=26% Similarity=0.417 Sum_probs=212.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|++..+|+.||||++..... ......+.+|+.+++.+ +||||++++
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~~iv~~~ 66 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--------------EGAPCTAIREVSLLKDL-KHANIVTLH 66 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------------------CCCCCCCHHHHSCC-CCTTBCCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--------------cccchhHHHHHHHHHhc-CCCCCCeee
Confidence 479999999999999999999999999999999865421 00111245799999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+++||||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 67 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl 141 (324)
T 3mtl_A 67 DIIHTEKSLTLVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKL 141 (324)
T ss_dssp EEEECSSCEEEEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEE
T ss_pred eEEeeCCEEEEEecccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEE
Confidence 99999999999999997 5888877543 45799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+....+........
T Consensus 142 ~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 221 (324)
T 3mtl_A 142 ADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT 221 (324)
T ss_dssp CSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred ccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999765432 23345689999999999865 458899999999999999999999999888777766655322222
Q ss_pred CCC--------------------------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 333 RKP--------------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 333 ~~~--------------------------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
... ++.+++++.+||.+||+.||.+|||+.++|+||||.......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 292 (324)
T 3mtl_A 222 EETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292 (324)
T ss_dssp TTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTT
T ss_pred hHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccc
Confidence 111 235688999999999999999999999999999999876543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=397.12 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=210.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++++.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+++.+ +||||++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~ 97 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-------------EEGVPGTAIREVSLLKEL-QHRNIIE 97 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------------------CHHHHHHGGGC-CCTTBCC
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-------------ccccchhHHHHHHHHHHc-CCCCcce
Confidence 34689999999999999999999999999999999975421 112344567999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC--CCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--KEDS 251 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~--~~~~ 251 (574)
+++++.+.+.+|+||||++ |+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.. ...+
T Consensus 98 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~ 174 (329)
T 3gbz_A 98 LKSVIHHNHRLHLIFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETP 174 (329)
T ss_dssp EEEEEEETTEEEEEEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CC
T ss_pred EEEEEecCCEEEEEEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccc
Confidence 9999999999999999997 599988843 4579999999999999999999999999999999999999632 1355
Q ss_pred CeEEEeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 252 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+....
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 254 (329)
T 3gbz_A 175 VLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL 254 (329)
T ss_dssp EEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred eEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHh
Confidence 6999999999876432 33445688999999999865 36889999999999999999999999888877777665432
Q ss_pred CCCCCCCCC--------------------------CCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 329 PDFRRKPWP--------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 329 ~~~~~~~~~--------------------------~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.......|+ .+++++.+||.+||+.||.+|||+.++|+||||+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 255 GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp CCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred CCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 211111111 167889999999999999999999999999999874
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=414.04 Aligned_cols=258 Identities=28% Similarity=0.445 Sum_probs=208.4
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||.||+|++..+|+.||||++.+.. ........+.+|+.+|+.+ +||||++
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hpnIv~ 125 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-------------QNQTHAKRAYRELVLMKCV-NHKNIIS 125 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-------------GSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-------------cChHHHHHHHHHHHHHHhC-CCCCCCc
Confidence 4578999999999999999999999999999999997531 1123456788999999999 5999999
Q ss_pred EEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++... ..+||||||+.+ +|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 126 l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~-- 198 (464)
T 3ttj_A 126 LLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-- 198 (464)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC--
T ss_pred EEEEEccCCccccCCeEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe--
Confidence 99999654 468999999975 5666652 3589999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+..++.
T Consensus 199 -~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~ 277 (464)
T 3ttj_A 199 -SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277 (464)
T ss_dssp -TTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred -CCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478999999999988766656667899999999998865 568899999999999999999999998887776666654
Q ss_pred CCC----------------------CCCCCCC----CC------------CCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 327 NKP----------------------DFRRKPW----PS------------ISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 327 ~~~----------------------~~~~~~~----~~------------~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
... .+....+ +. .++++.+||.+||..||.+|||+.++|+||
T Consensus 278 ~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 211 1111110 00 146789999999999999999999999999
Q ss_pred ccccc
Q 008197 369 WVREG 373 (574)
Q Consensus 369 ~~~~~ 373 (574)
||+..
T Consensus 358 ~~~~~ 362 (464)
T 3ttj_A 358 YINVW 362 (464)
T ss_dssp TTGGG
T ss_pred hhhhc
Confidence 99853
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-48 Score=383.92 Aligned_cols=257 Identities=29% Similarity=0.579 Sum_probs=220.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..++..||||++...... .......+.+|+.+++.+ +||||++++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 75 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE------------KAGVEHQLRREVEIQSHL-RHPNILRLY 75 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH------------HHTCHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccc------------hhhHHHHHHHHHHHHHcC-CCCCCcchh
Confidence 5799999999999999999999999999999998764211 112345688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+..++||||+++|+|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l 150 (279)
T 3fdn_A 76 GYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKI 150 (279)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC---TTSCEEE
T ss_pred heEecCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc---CCCCEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||++...... ......||+.|+|||++.+. ++.++||||||+++|+|++|..||...........+......++
T Consensus 151 ~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-- 227 (279)
T 3fdn_A 151 ADFGWSVHAPSS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP-- 227 (279)
T ss_dssp CSCCEESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--
T ss_pred EeccccccCCcc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC--
Confidence 999998665433 23456899999999998765 47899999999999999999999998888888888777654433
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 228 --~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 228 --DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp --TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred --CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 357899999999999999999999999999999997654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=396.26 Aligned_cols=271 Identities=36% Similarity=0.623 Sum_probs=220.6
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|.+.+.||+|+||.||+|.+..+|+.||||++........ ..........+.+|+.+++.+ +||||
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l-~h~~i 77 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIG-------SAREADPALNVETEIEILKKL-NHPCI 77 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC----------------------CHHHHHHHHHHC-CCTTB
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhc-------ccccchhhhhHHHHHHHHHhC-CCCCC
Confidence 4456789999999999999999999999999999999976422100 000112234578999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++..+. +|+||||+++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++..+...
T Consensus 78 ~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~ 154 (322)
T 2ycf_A 78 IKIKNFFDAED-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC 154 (322)
T ss_dssp CCEEEEEESSS-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSC
T ss_pred ceEeeEEcCCc-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCC
Confidence 99999998766 899999999999999884 446799999999999999999999999999999999999998644456
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~ 326 (574)
.+||+|||++............+||+.|+|||++. ..++.++|||||||++|+|++|..||...... .....+..
T Consensus 155 ~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 234 (322)
T 2ycf_A 155 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234 (322)
T ss_dssp CEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH
T ss_pred eEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh
Confidence 79999999998776544445668999999999874 34678999999999999999999999765443 34455555
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+...+....++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 55444433456789999999999999999999999999999999863
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=429.51 Aligned_cols=257 Identities=25% Similarity=0.438 Sum_probs=228.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+++.||||++.+.... .....+.+..|..+|..+.+||+|+.++
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~------------~~~~~~~~~~E~~~l~~~~~~~~i~~l~ 408 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI------------QDDDVECTMVEKRVLALPGKPPFLTQLH 408 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH------------HTTTTHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc------------cHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 5799999999999999999999999999999999865211 1123466788999999887899999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+||||||++||+|.+++... ..+++..++.++.||+.||.|||++|||||||||+||||+ .++.+||
T Consensus 409 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---~~g~ikL 483 (674)
T 3pfq_A 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKI 483 (674)
T ss_dssp EECBCSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---SSSCEEE
T ss_pred EEEEeCCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---CCCcEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred Eeecccccc-CCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+.. .........+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+++..|+.....++
T Consensus 484 ~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p- 562 (674)
T 3pfq_A 484 ADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP- 562 (674)
T ss_dssp CCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCC-
T ss_pred eecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC-
Confidence 999999863 33444567899999999999875 568899999999999999999999999999999999998876654
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCH-----HHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~-----~~~l~hp~~~~~ 373 (574)
..+++++.+||.+||+.||.+||++ .++++||||+..
T Consensus 563 ---~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 563 ---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp ---TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred ---ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 4689999999999999999999997 999999999864
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-48 Score=413.21 Aligned_cols=258 Identities=27% Similarity=0.448 Sum_probs=222.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+.+.||+|+||.||+|+++.+|+.||||++.+.... .....+.+.+|+.+|+.+ +||||++++
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~------------~~~~~~~~~~E~~iL~~l-~hp~Iv~l~ 251 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK------------KRKGYQGAMVEKKILAKV-HSRFIVSLA 251 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh------------hhHHHHHHHHHHHHHHhc-CCCCEeeEE
Confidence 5799999999999999999999999999999999765221 112346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++|.+.+.+|+||||++||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 252 ~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~---~~g~v 328 (543)
T 3c4z_A 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNV 328 (543)
T ss_dssp EEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCE
T ss_pred EEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe---CCCCE
Confidence 99999999999999999999999885433 35699999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCCC-ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC----hhHHHHHHHhC
Q 008197 254 KATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~----~~~~~~~i~~~ 327 (574)
||+|||++........ ....+||+.|+|||++.+. ++.++|||||||++|||++|++||.+.. ...+...+...
T Consensus 329 kL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~ 408 (543)
T 3c4z_A 329 RISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408 (543)
T ss_dssp EECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC
T ss_pred EEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc
Confidence 9999999987654433 3456999999999998764 6889999999999999999999997753 35566677766
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
...++ +.+|+.+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 409 ~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 409 AVTYP----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp CCCCC----TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred ccCCC----cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 54443 468999999999999999999996 5899999999863
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-48 Score=389.01 Aligned_cols=261 Identities=28% Similarity=0.477 Sum_probs=212.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.+ +||||++++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~i~~~~ 68 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-------------DDPVIKKIALREIRMLKQL-KHPNLVNLL 68 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-------------C-HHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-------------cchHHHHHHHHHHHHHHhC-CCCCccchh
Confidence 57999999999999999999999999999999986542 1123456678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++...+.+++||||+++++|.+.+ .....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl 143 (311)
T 4agu_A 69 EVFRRKRRLHLVFEYCDHTVLHELD--RYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKL 143 (311)
T ss_dssp EEEEETTEEEEEEECCSEEHHHHHH--HTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred heeecCCeEEEEEEeCCCchHHHHH--hhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCCEEE
Confidence 9999999999999999998888766 3346799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC---
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--- 329 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~--- 329 (574)
+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+.....
T Consensus 144 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 223 (311)
T 4agu_A 144 CDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI 223 (311)
T ss_dssp CCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred eeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccc
Confidence 999999876532 33456689999999999865 458899999999999999999999988877665554432110
Q ss_pred ----------------CCCCC--------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 330 ----------------DFRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 330 ----------------~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..+.. .++.+++.+.+||.+||..||.+|||+.++|+||||++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp HHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred cccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence 00100 12568899999999999999999999999999999997643
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-48 Score=384.75 Aligned_cols=269 Identities=35% Similarity=0.633 Sum_probs=225.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|++..+|+.||||++...... ........+.+.+|+.+++.+ +||||++
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---------~~~~~~~~~~~~~E~~~l~~l-~h~~i~~ 72 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS---------SSRRGVSREEIEREVNILREI-RHPNIIT 72 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSST---------TCSSSBCHHHHHHHHHHHHHC-CCTTBCC
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccc---------ccccchHHHHHHHHHHHHHhC-CCCCeee
Confidence 346799999999999999999999999999999998765211 001112356789999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-CCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSS 252 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~-~~~~ 252 (574)
+++++.+.+..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++..+ ....
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 73 LHDIFENKTDVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp EEEEEECSSEEEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCC
T ss_pred hhheecCCCeEEEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCc
Confidence 99999999999999999999999998854 35799999999999999999999999999999999999998422 2338
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||++.............||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.........+......+
T Consensus 151 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 230 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230 (283)
T ss_dssp EEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCC
T ss_pred eEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCC
Confidence 99999999987765555566789999999999875 46889999999999999999999999988888888877766555
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+...++.+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 231 DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 4444567889999999999999999999999999999998643
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-48 Score=399.27 Aligned_cols=257 Identities=26% Similarity=0.492 Sum_probs=212.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC-CCCcce
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG-HENVVK 173 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~-hpniv~ 173 (574)
..+|++++.||+|+||.||+|.+.. ++.||||++.... ......+.+.+|+.+|+.|.+ ||||++
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~-------------~~~~~~~~~~~Ei~~l~~l~~~~~~iv~ 120 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEE-------------ADNQTLDSYRNEIAYLNKLQQHSDKIIR 120 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTT-------------CCHHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEeccc-------------ccHHHHHHHHHHHHHHHHcccCCCeEEE
Confidence 3569999999999999999999764 8999999987642 112345678999999999963 699999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++...+.+||||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+
T Consensus 121 ~~~~~~~~~~~~lv~E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~ 193 (390)
T 2zmd_A 121 LYDYEITDQYIYMVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGML 193 (390)
T ss_dssp EEEEEECSSEEEEEEE-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCE
T ss_pred EEEEEecCCEEEEEEe-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeE
Confidence 9999999999999999 568899998854 35789999999999999999999999999999999999996 4789
Q ss_pred EEEeeccccccCCCC---CccccccCccccchHhhhc------------CCCCCcchHhHHHHHHHHHhCCCCCCCCCh-
Q 008197 254 KATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKTE- 317 (574)
Q Consensus 254 kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~elltg~~Pf~~~~~- 317 (574)
||+|||++....... .....+||+.|+|||++.+ .++.++||||||||+|+|++|+.||.....
T Consensus 194 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 273 (390)
T 2zmd_A 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273 (390)
T ss_dssp EECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred EEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH
Confidence 999999998765332 2345689999999999864 467889999999999999999999977543
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
...+..++.....+..+ ...++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 274 ~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 274 ISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHhCccccCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 34555565544333322 23478899999999999999999999999999998643
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=393.64 Aligned_cols=261 Identities=28% Similarity=0.439 Sum_probs=218.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+++.+ +||||++++
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 82 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-------------KEGFPITALREIKILQLL-KHENVVNLI 82 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-------------SSSSCHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-------------cccchHHHHHHHHHHHhc-cCCCcccHh
Confidence 589999999999999999999999999999999865421 112234677999999999 599999999
Q ss_pred EEEEc--------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 176 NAFED--------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 176 ~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++.. .+.+|+||||+++ +|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~-- 158 (351)
T 3mi9_A 83 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 158 (351)
T ss_dssp EEEEEC--------CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--
T ss_pred heeeccccccccCCceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc--
Confidence 99986 4579999999975 777776433 35799999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCC-----CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 248 KEDSSLKATDFGLSDFIKP-----GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.+||+|||+|..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+......
T Consensus 159 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~ 237 (351)
T 3mi9_A 159 -RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 237 (351)
T ss_dssp -TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred -CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 478999999999976542 223345689999999998865 358899999999999999999999999888877
Q ss_pred HHHHHhCCCCCCCCCCCCC----------------------------CHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 321 FKEVLRNKPDFRRKPWPSI----------------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~----------------------------~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
...+......++...|+.+ ++.+.+||.+||..||.+|||+.++|+||||+.
T Consensus 238 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 238 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred HHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 7777654444444444332 677999999999999999999999999999987
Q ss_pred cCC
Q 008197 373 GGD 375 (574)
Q Consensus 373 ~~~ 375 (574)
...
T Consensus 318 ~~~ 320 (351)
T 3mi9_A 318 DPM 320 (351)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=386.11 Aligned_cols=255 Identities=31% Similarity=0.537 Sum_probs=220.3
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|...+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.+ +||||+++++
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~niv~~~~ 109 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---------------QQRRELLFNEVVIMRDY-QHFNVVEMYK 109 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---------------CCSHHHHHHHHHHHTTC-CCTTBCCEEE
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---------------hhHHHHHHHHHHHHHhC-CCCCcceEEE
Confidence 5788889999999999999999999999999986541 12346688999999999 5999999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
++...+..|+||||++|++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 110 ~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~ 183 (321)
T 2c30_A 110 SYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLS 183 (321)
T ss_dssp EEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEEC
T ss_pred EEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEe
Confidence 9999999999999999999998773 35799999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 257 DFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 257 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+....... ..
T Consensus 184 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~ 262 (321)
T 2c30_A 184 DFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LK 262 (321)
T ss_dssp CCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-CT
T ss_pred eeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-cC
Confidence 99999876433 233567899999999998654 5889999999999999999999999888777777776654321 12
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
....+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 263 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 263 NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 2345789999999999999999999999999999998654
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=402.67 Aligned_cols=262 Identities=29% Similarity=0.490 Sum_probs=207.1
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|+++.+|+.||||++.... ........+.+|+.+|+.+ +||||++
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~nIv~ 89 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-------------EDLIDCKRILREITILNRL-KSDYIIR 89 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-------------TSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-------------cChHHHHHHHHHHHHHHHc-CCCCcce
Confidence 5578999999999999999999999999999999996531 1123456789999999999 5999999
Q ss_pred EEEEEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++... ..+|+||||+. |+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 90 l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~--- 163 (432)
T 3n9x_A 90 LYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN--- 163 (432)
T ss_dssp EEEECCCSCTTTCCCEEEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---
T ss_pred EEEEEecCCCCcCCeEEEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC---
Confidence 99999765 67999999995 69998873 446799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCC-----------------------CccccccCccccchHhhh--cCCCCCcchHhHHHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGK-----------------------KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITY 303 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~-----------------------~~~~~~gt~~y~aPE~~~--~~~~~~~DvwSlG~il~ 303 (574)
.++.+||+|||+|+...... .....+||++|+|||++. ..++.++||||||||+|
T Consensus 164 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ 243 (432)
T 3n9x_A 164 QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFA 243 (432)
T ss_dssp TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHH
Confidence 47899999999998764322 235678999999999863 34688999999999999
Q ss_pred HHHhC-----------CCCCCCCCh-----------------hHHHHHH-----------------------HhCCCCCC
Q 008197 304 ILLCG-----------RRPFWDKTE-----------------DGIFKEV-----------------------LRNKPDFR 332 (574)
Q Consensus 304 elltg-----------~~Pf~~~~~-----------------~~~~~~i-----------------------~~~~~~~~ 332 (574)
||++| .++|.+... ...+..+ +...+...
T Consensus 244 ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 323 (432)
T 3n9x_A 244 ELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRK 323 (432)
T ss_dssp HHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCC
T ss_pred HHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCC
Confidence 99984 444433321 1111111 11111111
Q ss_pred CC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 333 RK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 333 ~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.. .++.+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 324 ~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 324 PINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp CCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred CCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 11 13578999999999999999999999999999999997543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=394.81 Aligned_cols=259 Identities=29% Similarity=0.483 Sum_probs=212.2
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+|+.+ +||||+
T Consensus 22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hpnIv 87 (367)
T 1cm8_A 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-------------QSELFAKRAYRELRLLKHM-RHENVI 87 (367)
T ss_dssp CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-------------SSHHHHHHHHHHHHHHHHC-CBTTBC
T ss_pred eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-------------cCHHHHHHHHHHHHHHHhC-CCcCCC
Confidence 35578999999999999999999999999999999986531 1123456788999999999 599999
Q ss_pred eEEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 173 KFYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 173 ~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
++++++... ..+|+||||+ +++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 88 ~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~- 162 (367)
T 1cm8_A 88 GLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN- 162 (367)
T ss_dssp CCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-
T ss_pred CceeeEecCCccccCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc-
Confidence 999999865 3569999999 8899887743 5699999999999999999999999999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.++.+||+|||+++.... .....+||++|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+..+
T Consensus 163 --~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i 238 (367)
T 1cm8_A 163 --EDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238 (367)
T ss_dssp --TTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred --CCCCEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 478999999999987543 2345689999999998865 5689999999999999999999999988776666655
Q ss_pred HhCC-----------------------CCCCC----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 325 LRNK-----------------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 325 ~~~~-----------------------~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.... +.... ..++..++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 4321 11111 12356789999999999999999999999999999998753
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=403.31 Aligned_cols=262 Identities=28% Similarity=0.404 Sum_probs=216.8
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-----
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA----- 166 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~----- 166 (574)
+.+..+|++++.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+.
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----------------~~~~~~~~E~~~l~~l~~~~~~ 156 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----------------RFHRQAAEEIRILEHLRKQDKD 156 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----------------HHHHHHHHHHHHHHHHHTTCTT
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----------------chHHHHHHHHHHHHHHhhcccc
Confidence 446678999999999999999999999999999999997641 23456778999988874
Q ss_pred CCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 167 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
+||||+++++++...+.+|+||||+. ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 157 ~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~ 235 (429)
T 3kvw_A 157 NTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ 235 (429)
T ss_dssp SCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESS
T ss_pred CCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcc
Confidence 57899999999999999999999995 69999887766667999999999999999999999999999999999999984
Q ss_pred CCCCCC--eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 247 AKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 247 ~~~~~~--vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
++. +||+|||+|..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.+..
T Consensus 236 ---~~~~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~ 310 (429)
T 3kvw_A 236 ---QGRSGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLAC 310 (429)
T ss_dssp ---TTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ---CCCcceEEeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 444 99999999976543 3345689999999998865 568999999999999999999999998887776665
Q ss_pred HHhCCCCCC--------------------C------------------------------CC-----CCCCCHHHHHHHH
Q 008197 324 VLRNKPDFR--------------------R------------------------------KP-----WPSISNSAKDFVK 348 (574)
Q Consensus 324 i~~~~~~~~--------------------~------------------------------~~-----~~~~~~~~~~li~ 348 (574)
+.......+ . .. ....++.+.+||.
T Consensus 311 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~ 390 (429)
T 3kvw_A 311 MIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390 (429)
T ss_dssp HHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHH
Confidence 543210000 0 00 0123678999999
Q ss_pred HccccCCCCCCCHHHHhcCccccccCC
Q 008197 349 KLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 349 ~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+||+.||.+|||+.++|+||||+....
T Consensus 391 ~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 391 QCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp HHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred HHCCCChhhCCCHHHHhCChhhccCCC
Confidence 999999999999999999999997543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=378.61 Aligned_cols=257 Identities=30% Similarity=0.581 Sum_probs=224.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+++.||||++...... .......+.+|+.+++.+ +||||++++
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 80 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE------------KEGVEHQLRREIEIQSHL-RHPNILRMY 80 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc------------hHHHHHHHHHHHHHHhcC-CCCCEeeEE
Confidence 5799999999999999999999999999999998764210 112345788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+||
T Consensus 81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl 155 (284)
T 2vgo_A 81 NYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKI 155 (284)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEE
T ss_pred EEEEcCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEE
Confidence 9999999999999999999999988544 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||++...... .....+||+.|+|||++.+. ++.++||||||+++|+|++|..||...........+......++
T Consensus 156 ~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-- 232 (284)
T 2vgo_A 156 ADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP-- 232 (284)
T ss_dssp CCCTTCEECSSS-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC--
T ss_pred ecccccccCccc-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC--
Confidence 999999765432 23456899999999998764 58899999999999999999999998888777777776654433
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 233 --~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 233 --PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271 (284)
T ss_dssp --TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred --CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence 457899999999999999999999999999999997654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-47 Score=386.74 Aligned_cols=264 Identities=31% Similarity=0.534 Sum_probs=228.1
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
....++|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+.+|+.+++.+ +||||
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~h~~i 103 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL------------LKPHQREKMSMEISIHRSL-AHQHV 103 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC------------CSHHHHHHHHHHHHHHHTC-CCTTB
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh------------cCHHHHHHHHHHHHHHHhC-CCCCC
Confidence 3455789999999999999999999999999999999876421 1223456788999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.+.+.+|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 104 v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~ 178 (335)
T 2owb_A 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDL 178 (335)
T ss_dssp CCEEEEEECSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTC
T ss_pred CeEEEEEecCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCC
Confidence 99999999999999999999999999977443 5799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||++..... .......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||......+.+..+.....
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 258 (335)
T 2owb_A 179 EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258 (335)
T ss_dssp CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred CEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC
Confidence 899999999987643 2334556899999999998764 57899999999999999999999988887777777777654
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
.++ ..+++.+.+||.+||..||.+|||+.++++||||+......
T Consensus 259 ~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~ 302 (335)
T 2owb_A 259 SIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302 (335)
T ss_dssp CCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred CCC----ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence 433 35789999999999999999999999999999998765433
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-47 Score=378.27 Aligned_cols=261 Identities=32% Similarity=0.539 Sum_probs=226.1
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
...++|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+.+|+.+++.+ +||||+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~iv 78 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL------------LKPHQREKMSMEISIHRSL-AHQHVV 78 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC------------CSHHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc------------cCHHHHHHHHHHHHHHHhC-CCCCEe
Confidence 345689999999999999999999999999999999876421 1123456788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+.+++||||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~ 153 (294)
T 2rku_A 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLE 153 (294)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCC
T ss_pred eeeeeeccCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCC
Confidence 9999999999999999999999999877443 5799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCC-CCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+||+|||++..... ........||+.|+|||++.+. ++.++||||||+++|+|++|+.||......+.+..+......
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 233 (294)
T 2rku_A 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 233 (294)
T ss_dssp EEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC
T ss_pred EEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCC
Confidence 99999999987643 2334456899999999998764 588999999999999999999999988887777777765543
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.+ ..+++.+.+||.+||+.||.+|||+.++++||||+....
T Consensus 234 ~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 274 (294)
T 2rku_A 234 IP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI 274 (294)
T ss_dssp CC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred Cc----cccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence 32 357899999999999999999999999999999987644
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=379.11 Aligned_cols=258 Identities=20% Similarity=0.329 Sum_probs=215.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
..|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+.+|+.+++.+ +||||++++
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~h~~iv~~~ 91 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-------------LTKSERQRFKEEAEMLKGL-QHPNIVRFY 91 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-------------SCHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh-------------hCHHHHHHHHHHHHHHHhC-CCCCeeeee
Confidence 46899999999999999999999999999999987542 1223456789999999999 599999999
Q ss_pred EEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCCC
Q 008197 176 NAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 176 ~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~ 249 (574)
+++.. ...+++||||+++|+|.+++... ..+++..++.++.||+.||.|||+++ |+||||||+|||++. .
T Consensus 92 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--~ 167 (290)
T 1t4h_A 92 DSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--P 167 (290)
T ss_dssp EEEEEESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--T
T ss_pred eeeccccCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC--C
Confidence 99875 46799999999999999988543 67999999999999999999999999 999999999999973 4
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
++.+||+|||++...... ......||+.|+|||++.+.++.++|||||||++|+|++|+.||.................
T Consensus 168 ~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 246 (290)
T 1t4h_A 168 TGSVKIGDLGLATLKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV 246 (290)
T ss_dssp TSCEEECCTTGGGGCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC
T ss_pred CCCEEEeeCCCccccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC
Confidence 679999999999765433 3345689999999999998899999999999999999999999987555444333333222
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
. +.......++++.+||.+||..||.+|||+.++++||||++.
T Consensus 247 ~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 247 K-PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp C-CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred C-ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 1 111223567899999999999999999999999999999863
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-48 Score=391.33 Aligned_cols=265 Identities=34% Similarity=0.604 Sum_probs=193.3
Q ss_pred ccccceeecc-cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 93 DFDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 93 ~~~~~y~~~~-~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.+.++|.+.+ .||+|+||.||+|+++.+|+.||||++.... ...+|+..+.++.+||||
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------------~~~~e~~~~~~~~~h~~i 84 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------------------KARQEVDHHWQASGGPHI 84 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--------------------HHHHHHHHHHHHTTSTTB
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--------------------HHHHHHHHHHHhcCCCCh
Confidence 3567899965 6999999999999999999999999986541 123344443333479999
Q ss_pred ceEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 172 VKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 172 v~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++++.. ...+++|||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~ 164 (336)
T 3fhr_A 85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK 164 (336)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS
T ss_pred HHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec
Confidence 999999976 5569999999999999999876555679999999999999999999999999999999999999865
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH----HH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI----FK 322 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~----~~ 322 (574)
+..+.+||+|||++...... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||........ ..
T Consensus 165 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 243 (336)
T 3fhr_A 165 EKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243 (336)
T ss_dssp STTCCEEECCCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred CCCceEEEeccccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH
Confidence 55678999999999865432 3345689999999998854 357889999999999999999999977654433 23
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCC
Q 008197 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 378 (574)
Q Consensus 323 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~ 378 (574)
.+......++...+..+++++.+||.+||..||.+|||+.++|+||||++......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~ 299 (336)
T 3fhr_A 244 RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 299 (336)
T ss_dssp -------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCC
T ss_pred hhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCC
Confidence 33344445555666789999999999999999999999999999999997654433
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=378.39 Aligned_cols=258 Identities=34% Similarity=0.595 Sum_probs=215.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|.+.+.||+|+||.||+|.+..+|+.||||++..... ......+.+.+|+.+++.+ +||||+++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~ 76 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI------------RSLDVVGKIKREIQNLKLF-RHPHIIKL 76 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH------------HHTTCHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc------------cchhHHHHHHHHHHHHhcC-CCCCEeEE
Confidence 4689999999999999999999999999999999875421 0112456788999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++...+.+|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++ .++.+|
T Consensus 77 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~ 151 (276)
T 2h6d_A 77 YQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAK 151 (276)
T ss_dssp EEEEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEE
T ss_pred EEEEecCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEE
Confidence 99999999999999999999999988543 5699999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++............+||+.|+|||++.+.. +.++||||||+++|+|++|+.||...........+.......+
T Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (276)
T 2h6d_A 152 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP 231 (276)
T ss_dssp ECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc
Confidence 99999998776555555678999999999987654 5789999999999999999999988888777777776544332
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..++..+.++|.+||+.||.+|||+.++++||||++..
T Consensus 232 ----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 232 ----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred ----hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 35789999999999999999999999999999998753
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-48 Score=399.70 Aligned_cols=257 Identities=28% Similarity=0.487 Sum_probs=213.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++++.||+|+||.||+|++..+|+.||||++.... ....+|+.+|+.+ +||||++
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-------------------~~~~~E~~il~~l-~hpnIv~ 64 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-------------------RYKNRELDIMKVL-DHVNIIK 64 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-------------------TSCCHHHHHHTTC-CCTTBCC
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-------------------chHHHHHHHHHHc-CCCCccc
Confidence 3468999999999999999999999999999999986541 1123799999999 5999999
Q ss_pred EEEEEEc--------------------------------------CCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHH
Q 008197 174 FYNAFED--------------------------------------DNYVYIAMELCEGGELLDRILA--KKDSRYTEKDA 213 (574)
Q Consensus 174 ~~~~~~~--------------------------------------~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~ 213 (574)
++++|.. ...+++||||++ |+|.+.+.. .....+++..+
T Consensus 65 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~ 143 (383)
T 3eb0_A 65 LVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLI 143 (383)
T ss_dssp EEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHH
T ss_pred hhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHH
Confidence 9999843 345899999997 587776643 34578999999
Q ss_pred HHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCC
Q 008197 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGP 291 (574)
Q Consensus 214 ~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~ 291 (574)
+.++.||+.||.|||++||+||||||+|||++. .++.+||+|||+|............+||+.|+|||++.+ .++.
T Consensus 144 ~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 221 (383)
T 3eb0_A 144 SIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTP 221 (383)
T ss_dssp HHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCT
T ss_pred HHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCc
Confidence 999999999999999999999999999999974 467899999999987766666667789999999998865 3688
Q ss_pred CcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC------------C-----CCCC---C-----CCCCCCHHHHHH
Q 008197 292 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK------------P-----DFRR---K-----PWPSISNSAKDF 346 (574)
Q Consensus 292 ~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~------------~-----~~~~---~-----~~~~~~~~~~~l 346 (574)
++|||||||++|+|++|+.||.+.+..+.+..++... + .++. . ..+.+++++.+|
T Consensus 222 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 222 SIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred chhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHH
Confidence 9999999999999999999999888777766665411 0 0110 0 113478889999
Q ss_pred HHHccccCCCCCCCHHHHhcCcccccc
Q 008197 347 VKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 347 i~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
|.+||..||.+|||+.++|+||||++.
T Consensus 302 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMAHPFFDHL 328 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred HHHHccCChhhCCCHHHHhcCHHHHHH
Confidence 999999999999999999999999864
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=386.59 Aligned_cols=255 Identities=26% Similarity=0.492 Sum_probs=213.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++++.||+|+||.||+|++..+++.||||++... ..+.+.+|+.+++.+.+||||+++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------------------~~~~~~~E~~~l~~l~~~~~i~~~ 96 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------------------KKKKIKREIKILENLRGGPNIITL 96 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------------------CHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------------------chHHHHHHHHHHHHcCCCCCEEEe
Confidence 36899999999999999999999999999999998653 235688999999999779999999
Q ss_pred EEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 175 YNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 175 ~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++.+ ....++||||+++++|.+.+ ..+++..++.++.||+.||.|||++||+||||||+|||++. +...
T Consensus 97 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~ 169 (330)
T 3nsz_A 97 ADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRK 169 (330)
T ss_dssp EEEEECTTTCCEEEEEECCCCCCHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTE
T ss_pred eeeeccCCCCceEEEEeccCchhHHHHH-----HhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCE
Confidence 999997 67899999999999998876 24899999999999999999999999999999999999984 3348
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCCh-hHHHHHH-----
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEV----- 324 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~-~~~~~~i----- 324 (574)
+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||..... ...+..+
T Consensus 170 ~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~ 249 (330)
T 3nsz_A 170 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 249 (330)
T ss_dssp EEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred EEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC
Confidence 99999999988776666667799999999999865 468899999999999999999999965432 2222111
Q ss_pred --------HhCCCCCC--------------------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 325 --------LRNKPDFR--------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 325 --------~~~~~~~~--------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
........ ......+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 250 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp HHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred CchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 11111110 011123789999999999999999999999999999999754
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-48 Score=392.92 Aligned_cols=259 Identities=32% Similarity=0.553 Sum_probs=216.1
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|+++.+|+.||||++........ ..........+.+|+.+++.+ +||||+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l-~h~~Iv 92 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLED-------CWIEDPKLGKVTLEIAILSRV-EHANII 92 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTT-------SEEEETTTEEEEHHHHHHTTC-CCTTBC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccc-------cccchHHHHHHHHHHHHHHhC-CCCCEe
Confidence 456789999999999999999999999999999999976531100 000011223467899999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCC-chHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++++.+.+.+++||||+.+| +|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 93 ~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~ 167 (335)
T 3dls_A 93 KVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDF 167 (335)
T ss_dssp CEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTS
T ss_pred eEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCC
Confidence 9999999999999999999777 9988773 446799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||++............+||+.|+|||++.+.. +.++|||||||++|+|++|+.||..... ....
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~-- 239 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA-- 239 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT--
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh--
Confidence 99999999998877666666788999999999987653 6789999999999999999999965321 1111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.......+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 240 --~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 282 (335)
T 3dls_A 240 --AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV 282 (335)
T ss_dssp --CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred --ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence 1112235789999999999999999999999999999998743
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-47 Score=383.83 Aligned_cols=262 Identities=27% Similarity=0.505 Sum_probs=217.7
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.....++|++.+.||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+++.+.+|||
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~e~~~l~~l~~h~~ 82 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----------------DEEEEIKQEINMLKKYSHHRN 82 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----------------STTHHHHHHHHHHHHHCCSTT
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----------------ccHHHHHHHHHHHHhccCCCC
Confidence 3456679999999999999999999999999999999986541 123568899999999967999
Q ss_pred cceEEEEEEc------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 171 VVKFYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 171 iv~~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
|+++++++.. .+.+|+||||+++|+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~ 162 (326)
T 2x7f_A 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 162 (326)
T ss_dssp BCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE
T ss_pred eeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE
Confidence 9999999986 5689999999999999998876555679999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCC-CCccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCCh
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTE 317 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~ 317 (574)
+ .++.+||+|||++...... ......+||+.|+|||++. ..++.++|||||||++|+|++|..||.+...
T Consensus 163 ~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 239 (326)
T 2x7f_A 163 T---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239 (326)
T ss_dssp C---TTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred c---CCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence 8 4788999999999865432 2234568999999999985 3468899999999999999999999988877
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
......+...... ......+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 240 ~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 240 MRALFLIPRNPAP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp HHHHHHHHHSCCC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred HHHHHHhhcCccc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 6666666554322 22235678999999999999999999999999999999874
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=394.00 Aligned_cols=265 Identities=24% Similarity=0.336 Sum_probs=218.1
Q ss_pred CcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 89 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
...+.+.++|++.+.||+|+||.||+|++..+|+.||||++.... .....+..|+.+++.+..|
T Consensus 47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~e~~~l~~l~~~ 110 (382)
T 2vx3_A 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----------------AFLNQAQIEVRLLELMNKH 110 (382)
T ss_dssp CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH----------------HHHHHHHHHHHHHHHHHHC
T ss_pred ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH----------------HHHHHHHHHHHHHHHHHhc
Confidence 334567789999999999999999999999999999999997541 2345677899999888656
Q ss_pred CC-----cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCEeecCCCCc
Q 008197 169 EN-----VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKPEN 241 (574)
Q Consensus 169 pn-----iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH--~~~iiHrDlkp~N 241 (574)
++ |+++++++...+.+||||||+. |+|.+++.......+++..++.++.||+.||.||| ..||+||||||+|
T Consensus 111 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~N 189 (382)
T 2vx3_A 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN 189 (382)
T ss_dssp SSGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGG
T ss_pred ccccceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCccc
Confidence 64 9999999999999999999996 59999887665567999999999999999999999 4699999999999
Q ss_pred EEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 242 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 242 ill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
||++. +.++.+||+|||+|..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+..+.
T Consensus 190 Ill~~-~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~ 266 (382)
T 2vx3_A 190 ILLCN-PKRSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 266 (382)
T ss_dssp EEESS-TTSCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred EEEec-CCCCcEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99963 2467899999999987643 2345689999999999876 468899999999999999999999998887777
Q ss_pred HHHHHhCCCCCC-----------------------------------CCCCCC-------------------------CC
Q 008197 321 FKEVLRNKPDFR-----------------------------------RKPWPS-------------------------IS 340 (574)
Q Consensus 321 ~~~i~~~~~~~~-----------------------------------~~~~~~-------------------------~~ 340 (574)
+..+.......+ .+.+.. .+
T Consensus 267 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (382)
T 2vx3_A 267 MNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADY 346 (382)
T ss_dssp HHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHH
T ss_pred HHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhh
Confidence 766654211100 000000 01
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 341 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 341 ~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+++.+||.+||+.||.+|||+.++|+||||++.
T Consensus 347 ~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 347 LKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 368999999999999999999999999999864
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-47 Score=375.13 Aligned_cols=261 Identities=21% Similarity=0.339 Sum_probs=214.3
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.++..+.+||||
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~~~e~~~~~~l~~h~~i 73 (289)
T 1x8b_A 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-------------GSVDEQNALREVYAHAVLGQHSHV 73 (289)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-------------TSHHHHHHHHHHHHHHHSCSCTTB
T ss_pred ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-------------ccHHHHHHHHHHHHHHHhCCCCCe
Confidence 4456789999999999999999999999999999999876421 122456788999999999669999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK- 248 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~- 248 (574)
+++++++.+.+.+++||||++|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++..+
T Consensus 74 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~ 153 (289)
T 1x8b_A 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSI 153 (289)
T ss_dssp CCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----
T ss_pred eeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCC
Confidence 999999999999999999999999999885532 26799999999999999999999999999999999999998432
Q ss_pred ---------------CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCC
Q 008197 249 ---------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRP 311 (574)
Q Consensus 249 ---------------~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~P 311 (574)
....+||+|||++....... ...||+.|+|||++.+.. +.++|||||||++|+|++|.+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~ 230 (289)
T 1x8b_A 154 PNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230 (289)
T ss_dssp ----------------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CcccccccccccccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCC
Confidence 45589999999998765432 346999999999987653 4689999999999999999988
Q ss_pred CCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 312 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 312 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+... .....+..+... ...+.+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 231 ~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 231 PRNG---DQWHEIRQGRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp CSSS---HHHHHHHTTCCC---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred Ccch---hHHHHHHcCCCC---CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence 7544 234445444322 12246889999999999999999999999999999998753
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=377.90 Aligned_cols=258 Identities=34% Similarity=0.605 Sum_probs=195.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+|+.||||++..... ......+.+.+|+.+++.+ +||||++++
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 77 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM------------YKAGMVQRVQNEVKIHCQL-KHPSILELY 77 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH------------HHTTCHHHHHHHHHHHTTB-CCTTBCCEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh------------hhhhHHHHHHHHHHHHHhC-CCCCeEeEE
Confidence 479999999999999999999999999999999875421 0112346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+..|+||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||
T Consensus 78 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl 153 (278)
T 3cok_A 78 NYFEDSNYVYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKI 153 (278)
T ss_dssp EEEECSSEEEEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEE
T ss_pred EEEccCCeEEEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEE
Confidence 999999999999999999999988743 346799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 154 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 230 (278)
T 3cok_A 154 ADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE--- 230 (278)
T ss_dssp CCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC---
T ss_pred EeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC---
Confidence 999999876432 223456899999999988654 588999999999999999999999877655554444332221
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
....++.++.+||.+||..||.+|||+.++++||||....
T Consensus 231 -~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 231 -MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred -CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 1245789999999999999999999999999999998643
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-48 Score=391.22 Aligned_cols=265 Identities=27% Similarity=0.430 Sum_probs=218.7
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.++|++.+.||+|+||.||+|++..+|+.||||++..... ........+.+|+.+++.+ +||||
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~~~E~~~l~~l-~hp~i 74 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA------------RDPSFYLRFRREAQNAAAL-NHPAI 74 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT------------TSHHHHHHHHHHHTTCCCC-CCTTB
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc------------CCHHHHHHHHHHHHHHHcC-CCCCc
Confidence 4567899999999999999999999999999999999976421 1123456788999999999 59999
Q ss_pred ceEEEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 172 VKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 172 v~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++++.... ..|+||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 75 v~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-- 150 (311)
T 3ork_A 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-- 150 (311)
T ss_dssp CCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE--
T ss_pred ceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc--
Confidence 99999987643 459999999999999988543 5799999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCC----CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
.++.+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+........
T Consensus 151 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~ 229 (311)
T 3ork_A 151 -ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229 (311)
T ss_dssp -TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred -CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 47889999999998654322 22346799999999998764 5788999999999999999999999988887777
Q ss_pred HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 323 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 323 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+.......+...++.+++++.+||.+||..||.+||++.+++.|+|++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 230 QHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp HHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred HHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 7777655444334567899999999999999999999999999999998543
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=390.15 Aligned_cols=264 Identities=27% Similarity=0.390 Sum_probs=213.5
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++++.||+|+||.||+|++..+|+.||||++....... ........+.+|+.+++.+ +||||+++
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~~~~~E~~~l~~l-~h~~iv~~ 77 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE----------AKDGINRTALREIKLLQEL-SHPNIIGL 77 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC----------------------CTHHHHHHHHHHHC-CCTTBCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcch----------hhhhhhHHHHHHHHHHhhC-CCCCCCeE
Confidence 468999999999999999999999999999999987542100 0011123578999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+++||||+++ +|.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 78 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~k 152 (346)
T 1ua2_A 78 LDAFGHKSNISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLK 152 (346)
T ss_dssp EEEECCTTCCEEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEE
T ss_pred EEEEeeCCceEEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEE
Confidence 9999999999999999975 88777643 345789999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCC-CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 255 ATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 255 l~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
|+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+......+..+.......
T Consensus 153 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~ 232 (346)
T 1ua2_A 153 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 232 (346)
T ss_dssp ECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC
T ss_pred EEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCC
Confidence 999999987643 333456789999999999864 35788999999999999999999999988877777776532211
Q ss_pred CCCC------------------------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKP------------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~------------------------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.... ++.+++++.+||.+||..||.+|||+.++|+||||+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 299 (346)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred ChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCC
Confidence 1111 134678999999999999999999999999999998754
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=385.56 Aligned_cols=262 Identities=23% Similarity=0.381 Sum_probs=214.7
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|++..+|+.||||++..... ....+.+.+|+.+++.+ +||||+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~h~~iv 70 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--------------LRPVDVQMREFEVLKKL-NHKNIV 70 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--------------GSCHHHHHHHHHHHHHC-CCTTBC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc--------------cchHHHHHHHHHHHHhc-CCCCcc
Confidence 355789999999999999999999999999999999875421 12346678999999999 599999
Q ss_pred eEEEEEEcCC--EEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc-CC
Q 008197 173 KFYNAFEDDN--YVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AK 248 (574)
Q Consensus 173 ~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~-~~ 248 (574)
++++++...+ .+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+.. .+
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~ 150 (319)
T 4euu_A 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED 150 (319)
T ss_dssp CEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTT
T ss_pred eEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCC
Confidence 9999998754 8899999999999999886543 234999999999999999999999999999999999999831 12
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhh---------cCCCCCcchHhHHHHHHHHHhCCCCCCCCC---
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK---------RKSGPESDVWSIGVITYILLCGRRPFWDKT--- 316 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~---------~~~~~~~DvwSlG~il~elltg~~Pf~~~~--- 316 (574)
..+.+||+|||+|............+||+.|+|||++. ..++.++|||||||++|+|++|+.||....
T Consensus 151 ~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 230 (319)
T 4euu_A 151 GQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230 (319)
T ss_dssp SCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred CCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence 46679999999998877666666778999999999885 456889999999999999999999996433
Q ss_pred -hhHHHHHHHhCCCCCC-------------------C--CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 317 -EDGIFKEVLRNKPDFR-------------------R--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 317 -~~~~~~~i~~~~~~~~-------------------~--~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
..+....++.+.+... . .....+++.+.+||.+||+.||.+|||+.++|+||=
T Consensus 231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 231 RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 3445566665543210 0 001123457889999999999999999999999984
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=387.26 Aligned_cols=259 Identities=27% Similarity=0.439 Sum_probs=212.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+.+|+.+++.+ +||||++++
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 90 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-------------DDKMVKKIAMREIKLLKQL-RHENLVNLL 90 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-------------SCHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-------------CchHHHHHHHHHHHHHhhC-CCCCEeeEE
Confidence 58999999999999999999999999999999986542 1123345678999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||+++++|.+.+ .....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~~kl 165 (331)
T 4aaa_A 91 EVCKKKKRWYLVFEFVDHTILDDLE--LFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKL 165 (331)
T ss_dssp EEEEETTEEEEEEECCSEEHHHHHH--HSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEE
T ss_pred EEeecCCEEEEEEecCCcchHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCcEEE
Confidence 9999999999999999988887755 3346799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCC-CCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC--
Q 008197 256 TDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-- 330 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 330 (574)
+|||++..... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.........+......
T Consensus 166 ~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (331)
T 4aaa_A 166 CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245 (331)
T ss_dssp CCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred EeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC
Confidence 99999976543 233455689999999999876 4588999999999999999999999888776665554421100
Q ss_pred -----------------CCC--------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 331 -----------------FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 331 -----------------~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.+. ..++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp HHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred hhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 000 0124678999999999999999999999999999999864
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-47 Score=385.11 Aligned_cols=257 Identities=26% Similarity=0.487 Sum_probs=207.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC-CCcce
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH-ENVVK 173 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h-pniv~ 173 (574)
.++|++++.||+|+||.||+|.+ .+++.||||++.... ......+.+.+|+.+|+.+.+| |||++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l~~~~~~iv~ 73 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-------------ADNQTLDSYRNEIAYLNKLQQHSDKIIR 73 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-------------CCHHHHHHHHHHHHHHHHHTTTCTTBCC
T ss_pred cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-------------cchHHHHHHHHHHHHHHhhhhcCCceEE
Confidence 46799999999999999999987 468999999987542 1223456789999999999632 99999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+++.+|+|||+ .+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ ++.+
T Consensus 74 ~~~~~~~~~~~~lv~e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~ 146 (343)
T 3dbq_A 74 LYDYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGML 146 (343)
T ss_dssp EEEEEECSSEEEEEECC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEE
T ss_pred EeeeEeeCCEEEEEEeC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcE
Confidence 99999999999999995 58899998854 46799999999999999999999999999999999999997 5789
Q ss_pred EEEeeccccccCCCCC---ccccccCccccchHhhh------------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChh
Q 008197 254 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK------------RKSGPESDVWSIGVITYILLCGRRPFWDKTED 318 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~------------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~ 318 (574)
||+|||+|........ ....+||+.|+|||++. ..++.++|||||||++|+|++|+.||......
T Consensus 147 kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 226 (343)
T 3dbq_A 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226 (343)
T ss_dssp EECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred EEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH
Confidence 9999999987654322 23568999999999985 34577899999999999999999999765433
Q ss_pred -HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 319 -GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 319 -~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+..+......... ....++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 227 ~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 227 ISKLHAIIDPNHEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp HHHHHHHHCTTSCCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHhcCCcccCC--cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 334444433322221 234567899999999999999999999999999998643
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-47 Score=392.97 Aligned_cols=257 Identities=28% Similarity=0.438 Sum_probs=203.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+++.+ +||||++
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hpniv~ 88 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-------------QNQTHAKRAYRELVLMKCV-NHKNIIG 88 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-------------SSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-------------CChHHHHHHHHHHHHHHhc-CCCCccc
Confidence 4568999999999999999999999999999999987531 1123456788999999999 5999999
Q ss_pred EEEEEEcCC------EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDN------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++...+ .+|+||||+. |+|.+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~-- 161 (371)
T 2xrw_A 89 LLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-- 161 (371)
T ss_dssp EEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--
T ss_pred eEEeeccccccccccceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc--
Confidence 999998654 8999999996 57887763 3589999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..++.
T Consensus 162 -~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 240 (371)
T 2xrw_A 162 -SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIE 240 (371)
T ss_dssp -TTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC
T ss_pred -CCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478999999999987665544556789999999999875 468899999999999999999999998887777776655
Q ss_pred CCCCC----------------------CCCC---------CCC-------CCHHHHHHHHHccccCCCCCCCHHHHhcCc
Q 008197 327 NKPDF----------------------RRKP---------WPS-------ISNSAKDFVKKLLVKDPRARLTAAQALSHP 368 (574)
Q Consensus 327 ~~~~~----------------------~~~~---------~~~-------~~~~~~~li~~~L~~dp~~Rps~~~~l~hp 368 (574)
..... .... ++. .++++.+||.+||..||.+|||+.++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 241 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp -CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 32111 0000 000 146789999999999999999999999999
Q ss_pred cccc
Q 008197 369 WVRE 372 (574)
Q Consensus 369 ~~~~ 372 (574)
||+.
T Consensus 321 ~~~~ 324 (371)
T 2xrw_A 321 YINV 324 (371)
T ss_dssp HHHT
T ss_pred chhh
Confidence 9975
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=392.90 Aligned_cols=259 Identities=31% Similarity=0.481 Sum_probs=200.3
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+|+.+ +||||+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hpnIv 91 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-------------QSIIHAKRTYRELRLLKHM-KHENVI 91 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-------------SSHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-------------cCHHHHHHHHHHHHHHHhC-CCCCCC
Confidence 35578999999999999999999999999999999986531 1123456788999999999 599999
Q ss_pred eEEEEEEcC------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 173 KFYNAFEDD------NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 173 ~~~~~~~~~------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
++++++... ..+|+|+||+ +++|.+.+. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~- 166 (367)
T 2fst_X 92 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN- 166 (367)
T ss_dssp CCSEEECSCSSGGGCCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-
T ss_pred cEEEEEecCCccccCCeEEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC-
Confidence 999999754 5689999999 789988773 25799999999999999999999999999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.++.+||+|||+++.... .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+.+....+..+
T Consensus 167 --~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i 242 (367)
T 2fst_X 167 --EDCELKILDFGLARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242 (367)
T ss_dssp --TTCCEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred --CCCCEEEeeccccccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 478999999999987543 2345689999999999865 5688999999999999999999999888776666555
Q ss_pred HhCC-----------------------CCCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 325 LRNK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 325 ~~~~-----------------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.... ...+.. .++..++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 243 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence 4311 111111 1245788999999999999999999999999999998753
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-47 Score=398.72 Aligned_cols=258 Identities=28% Similarity=0.451 Sum_probs=211.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
...+|++.+.||+|+||.||+|++..+|+.||||++.... ....+|+.+|+.| +||||++
T Consensus 52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------------------~~~~~E~~il~~l-~hpniv~ 111 (420)
T 1j1b_A 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------------------RFKNRELQIMRKL-DHCNIVR 111 (420)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------------------TSCCHHHHHHHTC-CCTTBCC
T ss_pred ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------------------hhHHHHHHHHHHc-CCCCccc
Confidence 3457999999999999999999999999999999986541 1123799999999 5999999
Q ss_pred EEEEEEc------CCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 174 FYNAFED------DNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 174 ~~~~~~~------~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
++++|.. ..++++||||+++ +|.+.+.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 112 l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~ 190 (420)
T 1j1b_A 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD 190 (420)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE
T ss_pred eeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe
Confidence 9998853 2347899999975 66665532 3356799999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
. +.+.+||+|||+|+...........+||+.|+|||++.+ .++.++||||||||+|||++|++||.+.+..+.+..
T Consensus 191 ~--~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~ 268 (420)
T 1j1b_A 191 P--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 268 (420)
T ss_dssp T--TTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred C--CCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 4 346789999999987765555566789999999999865 468899999999999999999999998877666665
Q ss_pred HHhC------------CCCCCC--------CC-----CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 324 VLRN------------KPDFRR--------KP-----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 324 i~~~------------~~~~~~--------~~-----~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
++.. .+.+.. .. .+.+++++.+||.+||..||.+|||+.++++||||++..
T Consensus 269 i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 269 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 5431 111111 11 135688999999999999999999999999999998654
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-47 Score=378.33 Aligned_cols=263 Identities=26% Similarity=0.393 Sum_probs=216.6
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+.+.++|++.+.||+|+||.||+|++..+++.||||++.... .......+.+.+|+.+++.+ +|||
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~~~~~e~~~l~~l-~hp~ 72 (294)
T 4eqm_A 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP------------REKEETLKRFEREVHNSSQL-SHQN 72 (294)
T ss_dssp SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCS------------SCCHHHHHHHHHHHHHHTTC-CBTT
T ss_pred hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCc------------cccHHHHHHHHHHHHHHhcC-CCCC
Confidence 3456789999999999999999999999999999999986541 11234456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.+.+.+|+||||++|++|.+++... .++++..+..++.||+.||.|||++||+||||||+|||++ .+
T Consensus 73 iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~ 147 (294)
T 4eqm_A 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID---SN 147 (294)
T ss_dssp BCCEEEEEECSSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TT
T ss_pred CceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CC
Confidence 999999999999999999999999999988543 5799999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCC--CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 251 SSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+.+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+........+..
T Consensus 148 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~ 227 (294)
T 4eqm_A 148 KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD 227 (294)
T ss_dssp SCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSS
T ss_pred CCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhc
Confidence 899999999998764332 23346899999999988765 578899999999999999999999988877766666554
Q ss_pred CCCC-CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 328 KPDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 328 ~~~~-~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
.... .....+.+|+.+.++|.+||..||.+||+..+.+.++|..
T Consensus 228 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 228 SVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred cCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 3322 1223467899999999999999999999766767777754
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=400.23 Aligned_cols=262 Identities=26% Similarity=0.415 Sum_probs=196.1
Q ss_pred cccceee-cccccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTI-GKLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~-~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
+.+.|.+ +++||+|+||.||+|+++ .+++.||||++.... ....+.+|+.+|+.| +|||
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~E~~~l~~l-~hpn 79 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-----------------ISMSACREIALLREL-KHPN 79 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-----------------CCHHHHHHHHHHHHC-CCTT
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-----------------CCHHHHHHHHHHHhc-CCCC
Confidence 4456887 568999999999999965 578999999987541 123577999999999 5999
Q ss_pred cceEEEEEE--cCCEEEEEEeccCCCchHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCc
Q 008197 171 VVKFYNAFE--DDNYVYIAMELCEGGELLDRILAKK-------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 241 (574)
Q Consensus 171 iv~~~~~~~--~~~~~~lv~e~~~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~N 241 (574)
|+++++++. ....+||||||+. |+|.+.+.... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 80 iv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~N 158 (405)
T 3rgf_A 80 VISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN 158 (405)
T ss_dssp BCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred eeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHH
Confidence 999999995 4789999999996 58888774321 2359999999999999999999999999999999999
Q ss_pred EEEccC-CCCCCeEEEeeccccccCCC----CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCC
Q 008197 242 FLFKSA-KEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWD 314 (574)
Q Consensus 242 ill~~~-~~~~~vkl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~ 314 (574)
||+... ..++.+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|++||.+
T Consensus 159 Ill~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 159 ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred eEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999532 25689999999999876432 23345789999999999875 368899999999999999999999976
Q ss_pred CChh---------HHHHHHHhCCCCCCCCCCC----------------------------------CCCHHHHHHHHHcc
Q 008197 315 KTED---------GIFKEVLRNKPDFRRKPWP----------------------------------SISNSAKDFVKKLL 351 (574)
Q Consensus 315 ~~~~---------~~~~~i~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~L 351 (574)
.... ..+..+...........|+ ..++.+.+||.+||
T Consensus 239 ~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L 318 (405)
T 3rgf_A 239 RQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 318 (405)
T ss_dssp CC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHS
T ss_pred ccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHc
Confidence 5442 3333433321111111221 12678999999999
Q ss_pred ccCCCCCCCHHHHhcCccccccC
Q 008197 352 VKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 352 ~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..||.+|||+.++|+||||++..
T Consensus 319 ~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 319 TMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CSSGGGSCCHHHHHTSGGGTSSS
T ss_pred cCCcccCCCHHHHhcChhhccCC
Confidence 99999999999999999998754
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=373.25 Aligned_cols=259 Identities=27% Similarity=0.474 Sum_probs=223.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
...++|++++.||+|+||.||+|++..+++.||||++.... .....+.+.+|+.+++.+ +||||+
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~i~ 83 (303)
T 3a7i_A 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--------------AEDEIEDIQQEITVLSQC-DSPYVT 83 (303)
T ss_dssp CGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT--------------CSTTHHHHHHHHHHHHHC-CCTTBC
T ss_pred ChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccc--------------cHHHHHHHHHHHHHHHhC-CCCCEe
Confidence 34568999999999999999999999999999999987542 122456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++...+.+|+||||+++++|.+++. ..++++..+..++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~ 157 (303)
T 3a7i_A 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGE 157 (303)
T ss_dssp CEEEEEEETTEEEEEEECCTTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSC
T ss_pred EEEEEEecCCeEEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---CCCC
Confidence 99999999999999999999999998873 35799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...........+......
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 237 (303)
T 3a7i_A 158 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP 237 (303)
T ss_dssp EEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred EEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC
Confidence 9999999997765432 23456899999999998754 588999999999999999999999888777766666655432
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.....++..+.+||.+||..||.+|||+.++++||||.....
T Consensus 238 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 238 ---TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp ---CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred ---CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 223467899999999999999999999999999999987543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-47 Score=390.04 Aligned_cols=259 Identities=29% Similarity=0.450 Sum_probs=215.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+..+|++++.||+|+||.||+|++..+++.||||++.... .....+.+.+|+.+++.+ +||||++
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~niv~ 89 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--------------HQTYCQRTLREIKILLRF-RHENIIG 89 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--------------CHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--------------CcHHHHHHHHHHHHHHhc-CCCCCcc
Confidence 3468999999999999999999999999999999986531 123446788999999999 5999999
Q ss_pred EEEEEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++... ..+|+||||+. |+|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 90 ~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~--- 162 (364)
T 3qyz_A 90 INDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--- 162 (364)
T ss_dssp CCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---
T ss_pred ceeEEecCCccccceEEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC---
Confidence 99999754 47999999996 589887743 4699999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCC----CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
.++.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+.
T Consensus 163 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 242 (364)
T 3qyz_A 163 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 242 (364)
T ss_dssp TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHH
T ss_pred CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHH
Confidence 47889999999998654322 1245689999999998653 36889999999999999999999998887777666
Q ss_pred HHHhCCCCC-----------------------CCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 323 EVLRNKPDF-----------------------RRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 323 ~i~~~~~~~-----------------------~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+....... ... .++.+++++.+||.+||..||.+|||+.++|+||||++..
T Consensus 243 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~ 321 (364)
T 3qyz_A 243 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321 (364)
T ss_dssp HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred HHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence 654311100 001 1256789999999999999999999999999999999754
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-47 Score=373.45 Aligned_cols=259 Identities=33% Similarity=0.595 Sum_probs=218.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+|+.||||++..... ....+.+.+|+.+++.+ +||||++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i~~ 69 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--------------VDCPENIKKEICINKML-NHENVVK 69 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--------------TTHHHHHHHHHHHHHTC-CCTTBCC
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--------------hhhhHHHHHHHHHHHhc-CCCCcee
Confidence 34679999999999999999999999999999999865421 12346788999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+.+..|+||||+++++|.+++ .....+++..+..++.||+.||.|||++||+||||||+||+++ .++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~ 144 (276)
T 2yex_A 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNL 144 (276)
T ss_dssp EEEEEEETTEEEEEEECCTTEEGGGGS--BTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCE
T ss_pred eeeEEEcCCEEEEEEEecCCCcHHHHH--hhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCE
Confidence 999999999999999999999999877 3346799999999999999999999999999999999999998 47889
Q ss_pred EEEeeccccccCCC---CCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhC
Q 008197 254 KATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN 327 (574)
Q Consensus 254 kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~ 327 (574)
||+|||++...... ......+||+.|+|||++.+.. +.++|||||||++|+|++|+.||...... ..+..+...
T Consensus 145 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (276)
T 2yex_A 145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224 (276)
T ss_dssp EECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT
T ss_pred EEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc
Confidence 99999999765322 2234568999999999987643 56899999999999999999999876543 333344333
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. ....++.+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 225 ~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 225 KT--YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp CT--TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred cc--ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 22 2233467899999999999999999999999999999998754
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=392.82 Aligned_cols=258 Identities=27% Similarity=0.518 Sum_probs=214.4
Q ss_pred cceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++.+.||+|+||.||+|++. .+|+.||||++.+.... ......+.+.+|+.+|+.+.+||||+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~~~E~~~l~~l~~h~~iv 122 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-----------QKAKTTEHTRTERQVLEHIRQSPFLV 122 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-----------EEESSGGGCCCHHHHHHHHHTCTTBC
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhh-----------hhhhHHHHHHHHHHHHHHccCCCcee
Confidence 58999999999999999999984 58999999998764210 00112234668999999997799999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++...+.+||||||+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 123 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~ 197 (355)
T 1vzo_A 123 TLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGH 197 (355)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSC
T ss_pred EEEEEEeeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCc
Confidence 9999999999999999999999999988544 5799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCC--CCccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCC----hhHHHHH
Q 008197 253 LKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKE 323 (574)
Q Consensus 253 vkl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~----~~~~~~~ 323 (574)
+||+|||+++..... ......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.... ...+...
T Consensus 198 ~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 277 (355)
T 1vzo_A 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR 277 (355)
T ss_dssp EEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH
T ss_pred EEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH
Confidence 999999999765322 22345689999999999875 24788999999999999999999996542 3344455
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+....+.++ +.+++.+.+||.+||..||.+|| |+.++++||||+..
T Consensus 278 ~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 278 ILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HhccCCCCC----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 555443332 46889999999999999999999 99999999999863
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-47 Score=386.59 Aligned_cols=256 Identities=26% Similarity=0.426 Sum_probs=205.2
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|+++.+|+.||||++.... .....+.+.+|+.+|+.+ +||||++
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~hpniv~ 68 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--------------RELAREKVMREVKALAKL-EHPGIVR 68 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--------------TTTHHHHHHHHHHHHTSC-CCTTBCC
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--------------chhHHHHHHHHHHHHHhC-CCCCEee
Confidence 3467999999999999999999999999999999987541 123456789999999999 5999999
Q ss_pred EEEEEEcCC---------------------------------------------------------EEEEEEeccCCCch
Q 008197 174 FYNAFEDDN---------------------------------------------------------YVYIAMELCEGGEL 196 (574)
Q Consensus 174 ~~~~~~~~~---------------------------------------------------------~~~lv~e~~~gg~L 196 (574)
++++|.+.. .+++|||||+||+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L 148 (332)
T 3qd2_B 69 YFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENL 148 (332)
T ss_dssp EEEEEEECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCH
T ss_pred EEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCH
Confidence 999986533 48999999999999
Q ss_pred HHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCC-------
Q 008197 197 LDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK------- 268 (574)
Q Consensus 197 ~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~------- 268 (574)
.+++..... ...++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~~~ 225 (332)
T 3qd2_B 149 KDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLT 225 (332)
T ss_dssp HHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC--------
T ss_pred HHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccccc
Confidence 998854322 2356677999999999999999999999999999999998 47899999999998765432
Q ss_pred ------CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCH
Q 008197 269 ------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341 (574)
Q Consensus 269 ------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 341 (574)
.....+||+.|+|||++.+ .++.++|||||||++|+|++|..|+.. .......+.... ....++..++
T Consensus 226 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~ 300 (332)
T 3qd2_B 226 PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLK---FPLLFTQKYP 300 (332)
T ss_dssp ------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTC---CCHHHHHHCH
T ss_pred cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccC---CCcccccCCh
Confidence 2234689999999999876 468899999999999999998777522 112222232221 1111234567
Q ss_pred HHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 342 ~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.+.+||.+||..||.+|||+.++|+||||++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 8899999999999999999999999999985
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=379.81 Aligned_cols=265 Identities=26% Similarity=0.375 Sum_probs=219.1
Q ss_pred cccceeecccccccCCeEEEEEEEc-CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpn 170 (574)
+.++|++.+.||+|+||.||+|++. .+|+.||||++...... ......+.+|+.+++.+. +|||
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~~e~~~l~~l~~~~h~~ 75 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-------------EGMPLSTIREVAVLRHLETFEHPN 75 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-------------TSCBCTHHHHHHHHHHHHHTCCTT
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc-------------ccCCchhhHHHHHHHhhhccCCCC
Confidence 4468999999999999999999985 67899999998754210 011124567888877763 5999
Q ss_pred cceEEEEEE-----cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 171 VVKFYNAFE-----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 171 iv~~~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
|+++++++. ....+++||||+. |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 76 i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~ 154 (326)
T 1blx_A 76 VVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 154 (326)
T ss_dssp BCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred eEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc
Confidence 999999987 5678999999997 6999988766556699999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+..+
T Consensus 155 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i 231 (326)
T 1blx_A 155 ---SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 231 (326)
T ss_dssp ---TTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ---CCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 478999999999987654444556789999999998865 4688999999999999999999999988877777766
Q ss_pred HhCCCCCC-----------------------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 325 LRNKPDFR-----------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 325 ~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
+....... ...++.+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred HHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 54211000 0123568899999999999999999999999999999987654
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=373.41 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=198.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|++..+|+.||||++..... .......+..+...++.+ +||||+++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~~~~~~~~~-~h~~iv~~ 71 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-------------SQEQKRLLMDLDISMRTV-DCPFTVTF 71 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-------------HHHHHHHHHHHHHHHTTC-CCTTBCCE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-------------cHHHHHHHHHHHHHHHhC-CCCeEEEE
Confidence 3689999999999999999999999999999999875411 011222333344445556 69999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++.+++..|+||||++ |+|.+.+.. .....+++..++.++.||+.||.|||++ ||+||||||+|||++ .++
T Consensus 72 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~ 147 (290)
T 3fme_A 72 YGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALG 147 (290)
T ss_dssp EEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TTC
T ss_pred eeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCC
Confidence 999999999999999997 588776643 2456799999999999999999999998 999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhh-----cCCCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVL 325 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~ 325 (574)
.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|+.||... ..........
T Consensus 148 ~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 227 (290)
T 3fme_A 148 QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227 (290)
T ss_dssp CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH
T ss_pred CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh
Confidence 99999999998776555555668999999999973 23577899999999999999999999763 3334444444
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..... ......+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 228 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 228 EEPSP--QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp HSCCC--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred ccCCC--CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 43322 222346889999999999999999999999999999998643
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-47 Score=393.14 Aligned_cols=267 Identities=23% Similarity=0.382 Sum_probs=213.3
Q ss_pred CCCcccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc
Q 008197 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166 (574)
Q Consensus 87 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~ 166 (574)
.+...+.+.++|++.+.||+|+||.||+|++..+|+.||||++... ....+.+.+|+.+++.+.
T Consensus 28 ~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~E~~~l~~l~ 91 (397)
T 1wak_A 28 LVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----------------EHYTETALDEIRLLKSVR 91 (397)
T ss_dssp SSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----------------HHHHHHHHHHHHHHHHHH
T ss_pred EEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----------------CcchHHHHHHHHHHHHHh
Confidence 3444566778999999999999999999999999999999998754 123467889999999985
Q ss_pred -------CCCCcceEEEEEE----cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEe
Q 008197 167 -------GHENVVKFYNAFE----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVH 234 (574)
Q Consensus 167 -------~hpniv~~~~~~~----~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiH 234 (574)
+||||+++++++. ....+|+||||+ +++|.+.+.......+++..++.++.||+.||.|||++ ||+|
T Consensus 92 ~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givH 170 (397)
T 1wak_A 92 NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIH 170 (397)
T ss_dssp HSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred hcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 2788999999998 567899999999 77888888766667899999999999999999999998 9999
Q ss_pred ecCCCCcEEEccCC----------------------------------------------CCCCeEEEeeccccccCCCC
Q 008197 235 RDMKPENFLFKSAK----------------------------------------------EDSSLKATDFGLSDFIKPGK 268 (574)
Q Consensus 235 rDlkp~Nill~~~~----------------------------------------------~~~~vkl~DFG~a~~~~~~~ 268 (574)
|||||+|||++..+ ....+||+|||+|......
T Consensus 171 rDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~- 249 (397)
T 1wak_A 171 TDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH- 249 (397)
T ss_dssp CCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-
T ss_pred CCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-
Confidence 99999999998421 1137999999999876432
Q ss_pred CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCCh------hHHHHHHHhCCCCCC---------
Q 008197 269 KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE------DGIFKEVLRNKPDFR--------- 332 (574)
Q Consensus 269 ~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~------~~~~~~i~~~~~~~~--------- 332 (574)
....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||...+. ......+.......+
T Consensus 250 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 328 (397)
T 1wak_A 250 -FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328 (397)
T ss_dssp -SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTT
T ss_pred -CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccc
Confidence 3456899999999988764 68899999999999999999999976542 122222211000000
Q ss_pred ----------------CCC-------------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 333 ----------------RKP-------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 333 ----------------~~~-------------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
..+ ....++.+.+||.+||+.||.+|||+.++|+||||+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp GGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred cccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 000 0112456889999999999999999999999999973
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=375.03 Aligned_cols=262 Identities=26% Similarity=0.468 Sum_probs=220.2
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+..+++.||||++...... ......+.+.+|+.+++.+ +||||++
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----------~~~~~~~~~~~E~~~l~~l-~h~~i~~ 70 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR-----------RIPNGEANVKKEIQLLRRL-RHKNVIQ 70 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH-----------HSTTHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc-----------ccchhHHHHHHHHHHHHhc-CCCCeeE
Confidence 346899999999999999999999999999999999764210 0123456789999999999 5999999
Q ss_pred EEEEEE--cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 174 FYNAFE--DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 174 ~~~~~~--~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++. ....+|+||||++++ |.+.+.......+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~ 146 (305)
T 2wtk_C 71 LVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGG 146 (305)
T ss_dssp EEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTC
T ss_pred EEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCC
Confidence 999984 456899999999876 77777665567899999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCC---CCccccccCccccchHhhhcCC---CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 252 SLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~---~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.+||+|||++...... .......||+.|+|||++.+.. +.++|||||||++|+|++|+.||.+.........+.
T Consensus 147 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~ 226 (305)
T 2wtk_C 147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIG 226 (305)
T ss_dssp CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHh
Confidence 9999999999876432 2234567999999999987532 668999999999999999999999888888888887
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.....++ ..+++.+.+||.+||..||.+|||+.++++||||+....
T Consensus 227 ~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 227 KGSYAIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HCCCCCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred cCCCCCC----CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 7654332 457899999999999999999999999999999987644
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=378.42 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=211.4
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..++|++.+.||+|+||.||+|.+..+|. .||||++.... .....+.+.+|+.+++.+ +|||
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ 111 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--------------TERQRRDFLSEASIMGQF-DHPN 111 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--------------CHHHHHHHHHHHHHHTTC-CCTT
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--------------CHHHHHHHHHHHHHHHhC-CCCC
Confidence 34689999999999999999999986655 49999987531 123456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.+.+.+|+||||++||+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .+
T Consensus 112 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~ 187 (325)
T 3kul_A 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---SN 187 (325)
T ss_dssp BCCEEEEECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TT
T ss_pred CCcEEEEEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---CC
Confidence 99999999999999999999999999998743 345799999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
+.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+
T Consensus 188 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~ 267 (325)
T 3kul_A 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267 (325)
T ss_dssp CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH
T ss_pred CCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 8999999999987643321 223456889999999874 46889999999999999999 99999998888888877
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+.. .+....+++.+.+||.+||..||.+|||+.++++
T Consensus 268 ~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 268 EEGYR---LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCC---CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 76532 2223568899999999999999999999999875
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=378.25 Aligned_cols=264 Identities=27% Similarity=0.384 Sum_probs=216.1
Q ss_pred ccccccceeecccccccCCeEEEEEEE-cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATD-KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.+.+.++|++.+.||+|+||.||+|.+ ..+|+.||||++... ....+.+.+|+.+++.+. |+
T Consensus 9 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----------------~~~~~~~~~e~~~l~~l~-~~ 71 (339)
T 1z57_A 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----------------DRYCEAARSEIQVLEHLN-TT 71 (339)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----------------HHHHHHHHHHHHHHHHHH-HH
T ss_pred CCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----------------CchhHHHHHHHHHHHHhh-hc
Confidence 345677999999999999999999998 568899999998653 123466789999999885 55
Q ss_pred ------CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 170 ------NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 170 ------niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
+|+++++++...+.+|+||||+ +++|.+++......++++..+..++.||+.||.|||++||+||||||+|||
T Consensus 72 ~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil 150 (339)
T 1z57_A 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENIL 150 (339)
T ss_dssp CTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEE
Confidence 4999999999999999999999 889999987665567999999999999999999999999999999999999
Q ss_pred EccCCC----------------CCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHH
Q 008197 244 FKSAKE----------------DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 306 (574)
Q Consensus 244 l~~~~~----------------~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ell 306 (574)
++..+. ++.+||+|||++...... ....+||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 228 (339)
T 1z57_A 151 FVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 228 (339)
T ss_dssp ESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred EeccccccccCCccccccccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHH
Confidence 984221 568999999999865432 345689999999999875 4688999999999999999
Q ss_pred hCCCCCCCCChhHHHHHHHhCCCCCCC----------------CCC------------------------CCCCHHHHHH
Q 008197 307 CGRRPFWDKTEDGIFKEVLRNKPDFRR----------------KPW------------------------PSISNSAKDF 346 (574)
Q Consensus 307 tg~~Pf~~~~~~~~~~~i~~~~~~~~~----------------~~~------------------------~~~~~~~~~l 346 (574)
+|..||...+..+....+.......+. ..| ...++.+.+|
T Consensus 229 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 308 (339)
T 1z57_A 229 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308 (339)
T ss_dssp HSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHH
Confidence 999999887766554443321111110 001 1124568899
Q ss_pred HHHccccCCCCCCCHHHHhcCccccccC
Q 008197 347 VKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 347 i~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
|.+||..||.+|||+.++++||||+...
T Consensus 309 i~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 309 IQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp HHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred HHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 9999999999999999999999998743
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=373.97 Aligned_cols=261 Identities=30% Similarity=0.459 Sum_probs=216.8
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+++.+ +||||+
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~i~ 79 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---------------EEELEDYIVEIEILATC-DHPYIV 79 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------------------CCHHHHHHHHHHHHHC-CCTTBC
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---------------HHHHHHHHHHHHHHhcC-CCCCEe
Confidence 45678999999999999999999999999999999986531 12356788999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++...+.+++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~ 155 (302)
T 2j7t_A 80 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGD 155 (302)
T ss_dssp CEEEEEECC-CEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSC
T ss_pred eeeeeeeeCCeEEEEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCC
Confidence 9999999999999999999999998877543 46799999999999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCC-CCCccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 253 LKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 253 vkl~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
+||+|||++..... ........||+.|+|||++. ..++.++|||||||++|+|++|..||...........+.
T Consensus 156 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 235 (302)
T 2j7t_A 156 IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA 235 (302)
T ss_dssp EEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred EEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHh
Confidence 99999998754221 11223457999999999873 345789999999999999999999998888777777776
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
....... .....++..+.+||.+||..||.+|||+.++++||||+...
T Consensus 236 ~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 236 KSDPPTL-LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283 (302)
T ss_dssp HSCCCCC-SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred ccCCccc-CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence 6543321 12245788999999999999999999999999999998754
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=372.72 Aligned_cols=260 Identities=28% Similarity=0.511 Sum_probs=215.0
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+...++|++.+.||+|+||.||+|.+..+|+.||||++.... ..+.+.+|+.+++.+ +||||
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~e~~~l~~l-~h~~i 86 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----------------DLQEIIKEISIMQQC-DSPHV 86 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----------------CCHHHHHHHHHHHTC-CCTTB
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----------------HHHHHHHHHHHHHhC-CCCCC
Confidence 345678999999999999999999999999999999986531 235688999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++...+.+|+||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~ 162 (314)
T 3com_A 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEG 162 (314)
T ss_dssp CCEEEEEEETTEEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTC
T ss_pred ccEEEEEEeCCEEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCC
Confidence 9999999999999999999999999988743 346799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||++...... .......||+.|+|||++.+. ++.++|||||||++|+|++|..||...........+.....
T Consensus 163 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 242 (314)
T 3com_A 163 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP 242 (314)
T ss_dssp CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred CEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC
Confidence 8999999999765433 223456899999999998754 58899999999999999999999988776665555544432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
. .......+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 243 ~-~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 243 P-TFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp C-CCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred c-ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 2 1112235789999999999999999999999999999998754
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=385.81 Aligned_cols=256 Identities=32% Similarity=0.511 Sum_probs=211.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.+.+.||+|+||.||+|.++.+|+.||||++.... ........+.+|+.+++.+ +||||++
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~niv~ 105 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-------------QSEIFAKRAYRELLLLKHM-QHENVIG 105 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-------------SSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-------------cchhHHHHHHHHHHHHHhc-CCCCchh
Confidence 5678999999999999999999999999999999987531 1123456788999999999 5999999
Q ss_pred EEEEEEcCCEE------EEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDNYV------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~~~------~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++...+.. |+||||+. ++|.+.+ ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 106 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~-- 178 (371)
T 4exu_A 106 LLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-- 178 (371)
T ss_dssp CSEEECSCSSSTTCCCCEEEEECCC-EEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--
T ss_pred hhhheeccCCcccceeEEEEEcccc-ccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC--
Confidence 99999877654 99999996 6887765 34599999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++..... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+..+.+..+.
T Consensus 179 -~~~~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 255 (371)
T 4exu_A 179 -EDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255 (371)
T ss_dssp -TTCCEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred -CCCCEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 478999999999986543 2345689999999999875 56889999999999999999999999887776666654
Q ss_pred hCCC-----------------------CCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 326 RNKP-----------------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 326 ~~~~-----------------------~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.... ..... .++.+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp HHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 3111 11111 124678999999999999999999999999999999864
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-48 Score=398.06 Aligned_cols=252 Identities=19% Similarity=0.226 Sum_probs=200.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCcc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENVV 172 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpniv 172 (574)
.++|++.+.||+|+||.||+|+++.+|+.||||++.... .......+.+.+|+.+++.+. +|||||
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------------~~~~~~~~~~~~E~~~l~~l~~l~hpniv 139 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE------------RPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-------------CCTTHHHHHHHHHHGGGGSTTCCSHHHH
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecc------------ccchHHHHHHHHHHHHHHhccccCCHHHH
Confidence 468999999999999999999998999999999997531 111234567889995555443 699999
Q ss_pred eEE-------EEEEcCCE-----------------EEEEEeccCCCchHHHHHhhcC-----CCCCHHHHHHHHHHHHHH
Q 008197 173 KFY-------NAFEDDNY-----------------VYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRV 223 (574)
Q Consensus 173 ~~~-------~~~~~~~~-----------------~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~ 223 (574)
+++ +++.+.+. .||||||+ +|+|.+++..... ..+++..+..++.||+.|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~a 218 (377)
T 3byv_A 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 218 (377)
T ss_dssp HHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHH
Confidence 998 77776543 89999999 6899998864321 123347888899999999
Q ss_pred HHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC------------CCC
Q 008197 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK------------SGP 291 (574)
Q Consensus 224 l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~------------~~~ 291 (574)
|.|||++||+||||||+|||++ .++.+||+|||+|+... ......+| +.|+|||++.+. ++.
T Consensus 219 L~~LH~~~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3byv_A 219 LASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTF 292 (377)
T ss_dssp HHHHHHTTEECSCCCGGGEEEC---TTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCH
T ss_pred HHHHHhCCeecCCCCHHHEEEc---CCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCCh
Confidence 9999999999999999999998 46899999999998643 23456678 999999998654 788
Q ss_pred CcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 292 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 292 ~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
++|||||||++|+|++|+.||.+.........+. ..++.+++++.+||.+||..||.+|||+.++++||||+
T Consensus 293 ~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 293 SFDAWALGLVIYWIWCADLPITKDAALGGSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HHHHHHHHHHHHHHHHSSCCC------CCSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred hhhHHHHHHHHHHHHHCCCCCcccccccchhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence 9999999999999999999997655433322222 12357889999999999999999999999999999998
Q ss_pred cc
Q 008197 372 EG 373 (574)
Q Consensus 372 ~~ 373 (574)
..
T Consensus 365 ~~ 366 (377)
T 3byv_A 365 QL 366 (377)
T ss_dssp HH
T ss_pred HH
Confidence 63
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=376.91 Aligned_cols=260 Identities=33% Similarity=0.513 Sum_probs=211.5
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++++.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++.+ +||||+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~iv 71 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---------------PQSVKHALREIKIIRRL-DHDNIV 71 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS---------------HHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC---------------hHHHHHHHHHHHHHHhc-CCCCee
Confidence 45678999999999999999999999999999999986531 23456788999999999 599999
Q ss_pred eEEEEEE--------------cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCC
Q 008197 173 KFYNAFE--------------DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 238 (574)
Q Consensus 173 ~~~~~~~--------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlk 238 (574)
++++++. ..+.+|+||||+. |+|.+++. ..++++..++.++.||+.||.|||++||+|||||
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 147 (320)
T 2i6l_A 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLK 147 (320)
T ss_dssp CEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCS
T ss_pred EEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 9999884 4578999999997 69988773 3679999999999999999999999999999999
Q ss_pred CCcEEEccCCCCCCeEEEeeccccccCCC----CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCC
Q 008197 239 PENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 239 p~Nill~~~~~~~~vkl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf 312 (574)
|+|||++. .++.+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|+.||
T Consensus 148 p~Nil~~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf 225 (320)
T 2i6l_A 148 PANLFINT--EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225 (320)
T ss_dssp GGGEEEET--TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred HHHEEEcC--CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCC
Confidence 99999974 4578999999999876432 22344578999999998754 4688899999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCC----------------------C----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 313 WDKTEDGIFKEVLRNKPDFR----------------------R----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~----------------------~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.........+....+... . ..++.+++++.+||.+||+.||.+|||+.++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 226 AGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 98887776666654332110 0 012468899999999999999999999999999
Q ss_pred CccccccC
Q 008197 367 HPWVREGG 374 (574)
Q Consensus 367 hp~~~~~~ 374 (574)
||||+...
T Consensus 306 hp~~~~~~ 313 (320)
T 2i6l_A 306 HPYMSIYS 313 (320)
T ss_dssp SHHHHTTC
T ss_pred Cccccccc
Confidence 99998654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-46 Score=385.42 Aligned_cols=258 Identities=26% Similarity=0.406 Sum_probs=214.0
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.... .....+.+.+|+.+++.+ +||||++
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~ 95 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--------------KPAIRNQIIRELQVLHEC-NSPYIVG 95 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--------------CHHHHHHHHHHHGGGGGC-CCTTBCC
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--------------CHHHHHHHHHHHHHHHHC-CCCCEEE
Confidence 3468999999999999999999999999999999987541 123456789999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++.+++.+|+||||++|++|.+++... ..+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.
T Consensus 96 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~ 170 (360)
T 3eqc_A 96 FYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGE 170 (360)
T ss_dssp EEEEEEETTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCC
T ss_pred EeEEEEECCEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCC
Confidence 999999999999999999999999988543 5799999999999999999999995 999999999999998 4788
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH---------
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK--------- 322 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~--------- 322 (574)
+||+|||++...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||..........
T Consensus 171 ~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 249 (360)
T 3eqc_A 171 IKLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 249 (360)
T ss_dssp EEECCCCCCHHHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------
T ss_pred EEEEECCCCcccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccccccc
Confidence 999999998754322 22446899999999998754 5889999999999999999999997765543322
Q ss_pred ---------------------------------HHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 323 ---------------------------------EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 323 ---------------------------------~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
.+..... +..+...++.++.+||.+||..||.+|||+.++|+|||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 250 AAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ------------------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 1122111 11122347889999999999999999999999999999
Q ss_pred ccccC
Q 008197 370 VREGG 374 (574)
Q Consensus 370 ~~~~~ 374 (574)
|+...
T Consensus 328 ~~~~~ 332 (360)
T 3eqc_A 328 IKRSD 332 (360)
T ss_dssp HHHHH
T ss_pred hhcch
Confidence 98743
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-47 Score=391.77 Aligned_cols=259 Identities=17% Similarity=0.182 Sum_probs=196.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-CCCCcceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-GHENVVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-~hpniv~~ 174 (574)
..|.+.+.||+|+||.||+|++..+|+.||||++..... ......+.+..|+.+++.|. +||||+++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~~~E~~~~~~l~~~hp~iv~~ 129 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE------------NSRSELERLHEATFAAARLLGESPEEARD 129 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST------------THHHHHHHHHHHHHHHHHHHC--------
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc------------ccccHHHHHHHHHHHHHHhcccChhhhhh
Confidence 459999999999999999999999999999999987521 11234567788877776664 49998875
Q ss_pred E-------EEEEcC-----------------CEEEEEEeccCCCchHHHHHhhcCCCCCHHHH------HHHHHHHHHHH
Q 008197 175 Y-------NAFEDD-----------------NYVYIAMELCEGGELLDRILAKKDSRYTEKDA------AVVVRQMLRVA 224 (574)
Q Consensus 175 ~-------~~~~~~-----------------~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~------~~i~~qi~~~l 224 (574)
+ +++... ..+|||||||+ |+|.+++.... ..+++... ..++.||+.||
T Consensus 130 ~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL 207 (371)
T 3q60_A 130 RRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLA 207 (371)
T ss_dssp --CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHH
Confidence 5 555433 34899999998 89999886542 23444445 67779999999
Q ss_pred HHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc---CCCCCcchHhHHHH
Q 008197 225 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVI 301 (574)
Q Consensus 225 ~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~i 301 (574)
.|||++||+||||||+|||++ .++.+||+|||+|+.... ......||+.|+|||++.+ .++.++|||||||+
T Consensus 208 ~~LH~~~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~i 282 (371)
T 3q60_A 208 ANLQSKGLVHGHFTPDNLFIM---PDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLS 282 (371)
T ss_dssp HHHHHTTEEETTCSGGGEEEC---TTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHH
T ss_pred HHHHHCCCccCcCCHHHEEEC---CCCCEEEEecceeeecCC--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHH
Confidence 999999999999999999998 478999999999987643 2224577799999999874 46889999999999
Q ss_pred HHHHHhCCCCCCCCChhHH--HHH---HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 302 TYILLCGRRPFWDKTEDGI--FKE---VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 302 l~elltg~~Pf~~~~~~~~--~~~---i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+|+|++|+.||.+...... +.. .......+..+.++.+++.+.+||.+||+.||.+|||+.++|+||||++.
T Consensus 283 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 283 IYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp HHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred HHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 9999999999977643211 000 11111223333446789999999999999999999999999999999863
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=383.18 Aligned_cols=261 Identities=21% Similarity=0.254 Sum_probs=218.9
Q ss_pred cccceeecccccccCCeEEEEEE-----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
..++|++++.||+|+||.||+|. +..+++.||||++.... .......+.+|+.+++.+ +|
T Consensus 69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h 133 (367)
T 3l9p_A 69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--------------SEQDELDFLMEALIISKF-NH 133 (367)
T ss_dssp CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--------------CHHHHHHHHHHHHHHHHC-CC
T ss_pred CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--------------ChhhHHHHHHHHHHHHhC-CC
Confidence 45789999999999999999999 44577899999986431 123445688999999999 59
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
|||+++++++.+.+..|+|||||+||+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 134 pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 213 (367)
T 3l9p_A 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 213 (367)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred CCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEE
Confidence 9999999999999999999999999999998865432 45899999999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCC---CCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChh
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTED 318 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~ 318 (574)
++..+.+..+||+|||+|+.... ........||+.|+|||++. ..++.++|||||||++|+|++ |..||.+....
T Consensus 214 l~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~ 293 (367)
T 3l9p_A 214 LTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 293 (367)
T ss_dssp ESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred EecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 98655566799999999975421 22334567899999999875 456889999999999999998 99999998888
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.....+..+.... ....+++.+.+||.+||+.||.+|||+.+++++.|+-.
T Consensus 294 ~~~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 294 EVLEFVTSGGRMD---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 8888777664322 22467899999999999999999999999999887643
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=374.84 Aligned_cols=262 Identities=27% Similarity=0.483 Sum_probs=199.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+..+++.||||++..... ....+.+.+|+.+++.+ +||||+++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i~~~ 78 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--------------QTSMDELLKEIQAMSQC-HHPNIVSY 78 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------------------CCCCC-CCTTBCCE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--------------chhHHHHHHHHHHHhhc-CCCCEeeE
Confidence 3579999999999999999999988999999999865411 12345678999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAK------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
++++...+..++||||++|++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 79 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~--- 155 (303)
T 2vwi_A 79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG--- 155 (303)
T ss_dssp EEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---
T ss_pred EEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---
Confidence 99999999999999999999999988531 245699999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCC------CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 249 EDSSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||........
T Consensus 156 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 235 (303)
T 2vwi_A 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV 235 (303)
T ss_dssp TTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH
T ss_pred CCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH
Confidence 47899999999987654321 1234689999999999864 578999999999999999999999988777666
Q ss_pred HHHHHhCCCCCCC------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 321 FKEVLRNKPDFRR------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 321 ~~~i~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
............. ..+..+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 295 (303)
T 2vwi_A 236 LMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295 (303)
T ss_dssp HHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred HHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence 6655554432211 12356789999999999999999999999999999998753
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=381.39 Aligned_cols=260 Identities=26% Similarity=0.383 Sum_probs=203.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|++..+|+.||||++.... ........|+..+..+ +||||++++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~~~~l~~l-~h~niv~~~ 85 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP----------------RFRNRELQIMQDLAVL-HHPNIVQLQ 85 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT----------------TCCCHHHHHHHHHHHH-CCTTBCCEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc----------------cccHHHHHHHHHHHhc-CCCCcccHH
Confidence 57999999999999999999999999999999886541 1123456778888888 599999999
Q ss_pred EEEEcCC-------EEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCEeecCCCCcEEE
Q 008197 176 NAFEDDN-------YVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKPENFLF 244 (574)
Q Consensus 176 ~~~~~~~-------~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH--~~~iiHrDlkp~Nill 244 (574)
++|...+ .+++||||+++ +|...+.. .....+++..+..++.||+.||.||| ++||+||||||+|||+
T Consensus 86 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll 164 (360)
T 3e3p_A 86 SYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164 (360)
T ss_dssp EEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEE
T ss_pred HhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEE
Confidence 9996533 38999999976 55554432 34567899999999999999999999 9999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
+. .++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+......+.
T Consensus 165 ~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 242 (360)
T 3e3p_A 165 NE--ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242 (360)
T ss_dssp ET--TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eC--CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH
Confidence 83 367999999999988776666667789999999998854 36889999999999999999999999988777776
Q ss_pred HHHhCCCCCC--------------------C--------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 323 EVLRNKPDFR--------------------R--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 323 ~i~~~~~~~~--------------------~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.+........ . ......++++.+||.+||+.||.+|||+.++|+||||++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp HHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred HHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 6654211100 0 00122567899999999999999999999999999999865
Q ss_pred C
Q 008197 375 D 375 (574)
Q Consensus 375 ~ 375 (574)
.
T Consensus 323 ~ 323 (360)
T 3e3p_A 323 D 323 (360)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-47 Score=386.98 Aligned_cols=274 Identities=23% Similarity=0.401 Sum_probs=221.7
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhh--hhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS--FQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+.++|++.+.||+|+||.||+|.+ +|+.||||++........... ............+.+.+|+.+++.+ +|||
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ 104 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEY 104 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTT
T ss_pred cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCC
Confidence 3457899999999999999999997 899999999976421100000 0000000111226789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHH------HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEE
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDR------ILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFL 243 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~------l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nil 243 (574)
|+++++++.+.+.+|+||||+++|+|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+|||
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 99999999999999999999999999887 533335789999999999999999999999 99999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC--CCC-CcchHhHHHHHHHHHhCCCCCCCCCh-hH
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGP-ESDVWSIGVITYILLCGRRPFWDKTE-DG 319 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~-~~DvwSlG~il~elltg~~Pf~~~~~-~~ 319 (574)
++ .++.+||+|||++...... ......||+.|+|||++.+. ++. ++|||||||++|+|++|..||..... ..
T Consensus 185 ~~---~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 185 MD---KNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp EC---TTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred Ec---CCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 98 4789999999999876443 34566899999999998765 234 89999999999999999999988776 66
Q ss_pred HHHHHHhCCCCCCCCC---------------CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 320 IFKEVLRNKPDFRRKP---------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~---------------~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
....+......++... .+.+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus 261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 6667666554443210 14688999999999999999999999999999999864
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=376.28 Aligned_cols=261 Identities=32% Similarity=0.519 Sum_probs=213.9
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++.... .......+.+|+.+++.+ +||||+
T Consensus 8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv 72 (353)
T 2b9h_A 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--------------KPLFALRTLREIKILKHF-KHENII 72 (353)
T ss_dssp CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--------------SHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--------------cchHHHHHHHHHHHHHhC-cCCCcC
Confidence 35678999999999999999999999999999999986431 123445678999999999 599999
Q ss_pred eEEEEEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 173 KFYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 173 ~~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
++++++... ...|+||||+. ++|.+.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~-- 146 (353)
T 2b9h_A 73 TIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN-- 146 (353)
T ss_dssp CEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC--
T ss_pred CeeeeecccccCccceEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc--
Confidence 999988754 78999999996 688887743 4699999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCC-----------CccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCC
Q 008197 248 KEDSSLKATDFGLSDFIKPGK-----------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWD 314 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~ 314 (574)
.++.+||+|||++....... .....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+
T Consensus 147 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 225 (353)
T 2b9h_A 147 -SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225 (353)
T ss_dssp -TTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred -CCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 47899999999998654321 1223579999999998753 468899999999999999999999988
Q ss_pred CChhHHHHHHHhCC------------------------CCCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 315 KTEDGIFKEVLRNK------------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 315 ~~~~~~~~~i~~~~------------------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.......+.... +.++.. .++.+++++.+||.+||..||.+|||+.++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 226 RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp SSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 87655554443210 111111 13568899999999999999999999999999
Q ss_pred CccccccCC
Q 008197 367 HPWVREGGD 375 (574)
Q Consensus 367 hp~~~~~~~ 375 (574)
||||+....
T Consensus 306 hp~~~~~~~ 314 (353)
T 2b9h_A 306 HPYLQTYHD 314 (353)
T ss_dssp SGGGTTTCC
T ss_pred CccccccCC
Confidence 999987543
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=377.13 Aligned_cols=265 Identities=26% Similarity=0.368 Sum_probs=216.2
Q ss_pred cccccccceeecccccccCCeEEEEEEEcCCC-CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANG-DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 90 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~-~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
..+.+.++|++.+.||+|+||.||+|.+..++ +.||||++.... ...+.+.+|+.+++.+. |
T Consensus 13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l~-~ 75 (355)
T 2eu9_A 13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG----------------KYREAARLEINVLKKIK-E 75 (355)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH----------------HHHHHHHHHHHHHHHHH-H
T ss_pred cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc----------------cchhHHHHHHHHHHHHh-h
Confidence 34557789999999999999999999998777 689999987531 23456788999999985 5
Q ss_pred CC------cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 169 EN------VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 169 pn------iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
++ ++.+++++...+.+|+||||+ +++|.+.+.......+++..++.++.||+.||.|||++||+||||||+||
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NI 154 (355)
T 2eu9_A 76 KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENI 154 (355)
T ss_dssp HCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGE
T ss_pred cCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 55 999999999999999999999 67888888766556899999999999999999999999999999999999
Q ss_pred EEccC----------------CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHH
Q 008197 243 LFKSA----------------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 305 (574)
Q Consensus 243 ll~~~----------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~el 305 (574)
|+... ..++.+||+|||++...... ....+||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 155 ll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 155 LFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp EESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred EEecccccccccccccccccccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 99432 14789999999999865432 345689999999999865 568899999999999999
Q ss_pred HhCCCCCCCCChhHHHHHHHhCCCCCCC----------------CCCC------------------------CCCHHHHH
Q 008197 306 LCGRRPFWDKTEDGIFKEVLRNKPDFRR----------------KPWP------------------------SISNSAKD 345 (574)
Q Consensus 306 ltg~~Pf~~~~~~~~~~~i~~~~~~~~~----------------~~~~------------------------~~~~~~~~ 345 (574)
++|+.||...........+.......+. ..|+ ..+.++.+
T Consensus 233 ~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (355)
T 2eu9_A 233 YRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312 (355)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHH
Confidence 9999999887766555444332111110 0011 12347889
Q ss_pred HHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 346 FVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 346 li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
||.+||..||.+|||+.++|+||||+...
T Consensus 313 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 313 LMRRMLEFDPAQRITLAEALLHPFFAGLT 341 (355)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred HHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence 99999999999999999999999999753
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=379.33 Aligned_cols=270 Identities=22% Similarity=0.355 Sum_probs=207.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|.+.. |+.||||++........... ........+.+.+|+.+++.+ +||||++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~----~~~~~~~~~~~~~E~~~l~~l-~h~~iv~ 93 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVN----ILSDSFLCKRVLREIRLLNHF-HHPNILG 93 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEE----GGGSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred hccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhh----hhhhhhHHHHHHHHHHHHHhC-CCcCccc
Confidence 45689999999999999999999754 89999999866421100000 001123457889999999999 5999999
Q ss_pred EEEEEEc-----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFED-----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++.. ...+|+||||+. |+|.+.+.. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~--- 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA--- 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc---
Confidence 9999843 447999999997 688887753 345799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+.......+..
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 248 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248 (362)
T ss_dssp TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 478899999999987655555566789999999998865 468899999999999999999999998877766666543
Q ss_pred CCC------------------------CCCCCC----CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 327 NKP------------------------DFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 327 ~~~------------------------~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... ..+... .+..++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 111 111111 245688899999999999999999999999999998753
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=369.76 Aligned_cols=256 Identities=27% Similarity=0.481 Sum_probs=208.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||.||+|++..+|+.||||++... ....+.+.+|+.+++.+ +||||++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----------------~~~~~~~~~E~~~l~~l-~h~~i~~ 66 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----------------EEKLSTILSEVMLLASL-NHQYVVR 66 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----------------HHHHHHHHHHHHHHTTC-CCTTBCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----------------HHHHHHHHHHHHHHHhc-CchHHHH
Confidence 446899999999999999999999999999999998653 12456788999999999 5999999
Q ss_pred EEEEEEc-------------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCC
Q 008197 174 FYNAFED-------------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240 (574)
Q Consensus 174 ~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~ 240 (574)
+++++.+ .+.+|+||||+++|+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~ 145 (303)
T 1zy4_A 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPM 145 (303)
T ss_dssp EEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred HHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHH
Confidence 9998864 4678999999999999998854 3456889999999999999999999999999999999
Q ss_pred cEEEccCCCCCCeEEEeeccccccCCC---------------CCccccccCccccchHhhhc--CCCCCcchHhHHHHHH
Q 008197 241 NFLFKSAKEDSSLKATDFGLSDFIKPG---------------KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITY 303 (574)
Q Consensus 241 Nill~~~~~~~~vkl~DFG~a~~~~~~---------------~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~ 303 (574)
|||++ .++.+||+|||++...... ......+||+.|+|||++.+ .++.++|||||||++|
T Consensus 146 Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 222 (303)
T 1zy4_A 146 NIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222 (303)
T ss_dssp GEEEC---TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred hEEEc---CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence 99998 4788999999999765421 22345679999999999875 4688999999999999
Q ss_pred HHHhCCCCCCCC-ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 304 ILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 304 elltg~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+|++ ||... ........+......++.......++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 223 ~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 223 EMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 9998 66433 3334455555555455544445677889999999999999999999999999999753
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=378.50 Aligned_cols=252 Identities=25% Similarity=0.365 Sum_probs=213.7
Q ss_pred ccceeecccccccCCeEEEEEEEc-------CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
.++|++++.||+|+||.||+|++. .++..||||++.... .....+.+.+|+.+|+.+.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~ 145 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--------------TEKDLSDLVSEMEMMKMIGK 145 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--------------BHHHHHHHHHHHHHHHHSCC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--------------CHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999874 345689999987541 12345678999999999956
Q ss_pred CCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCE
Q 008197 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLV 233 (574)
Q Consensus 168 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~ii 233 (574)
||||+++++++.+.+.+|+||||++||+|.+++.... ...+++..+..++.||+.||.|||++||+
T Consensus 146 hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 225 (370)
T 2psq_A 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 225 (370)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 9999999999999999999999999999999886543 23589999999999999999999999999
Q ss_pred eecCCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-C
Q 008197 234 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-G 308 (574)
Q Consensus 234 HrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g 308 (574)
||||||+|||++ .++.+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++ |
T Consensus 226 HrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g 302 (370)
T 2psq_A 226 HRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302 (370)
T ss_dssp CSCCCGGGEEEC---TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ccccchhhEEEC---CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999998 47899999999998664432 2234567899999998865 46889999999999999999 9
Q ss_pred CCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 309 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..||.+....++...+..+... .....+++.+.+||.+||..||.+|||+.++++
T Consensus 303 ~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 303 GSPYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CCSSTTCCGGGHHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999988888877777665422 222467899999999999999999999999976
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=365.18 Aligned_cols=259 Identities=25% Similarity=0.455 Sum_probs=219.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+.+|+.+++.+ +||||++++
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 71 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-------------MTEAEKQMLVSEVNLLREL-KHPNIVRYY 71 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT-------------CCHHHHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc-------------CCHHHHHHHHHHHHHHHhc-CCCCCCeEE
Confidence 58999999999999999999999999999999987642 1123456789999999999 599999999
Q ss_pred EEEE--cCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEeecCCCCcEEEcc
Q 008197 176 NAFE--DDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFKS 246 (574)
Q Consensus 176 ~~~~--~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~-----iiHrDlkp~Nill~~ 246 (574)
+++. ..+.+|+||||+++++|.+++.... ...+++..+..++.||+.||.|||+.| |+||||||+|||++
T Consensus 72 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~- 150 (279)
T 2w5a_A 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD- 150 (279)
T ss_dssp EEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC-
T ss_pred EEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc-
Confidence 9875 4678999999999999999885432 345999999999999999999999999 99999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCCC-ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.......+...+
T Consensus 151 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i 228 (279)
T 2w5a_A 151 --GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228 (279)
T ss_dssp --SSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred --CCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHH
Confidence 478999999999987654322 234579999999999876 4578899999999999999999999988877777777
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+.... ....+++++.+||.+||..||.+|||+.++++|+|+.+..
T Consensus 229 ~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 229 REGKFRR---IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp HHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred hhccccc---CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 7765321 1246789999999999999999999999999999998754
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=368.40 Aligned_cols=258 Identities=24% Similarity=0.336 Sum_probs=207.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|++.+.||+|+||.||+|++ +|..||||++.... ......+.+.+|+.+++++ +||||+++
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~hp~iv~~ 99 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQD-------------FHAERVNEFLREVAIMKRL-RHPNIVLF 99 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCC-------------CSHHHHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCC-------------CCHHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence 45899999999999999999975 68899999987642 1123456788999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCCCCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~ 251 (574)
++++.+.+.+++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++| |+||||||+|||++ .++
T Consensus 100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~---~~~ 176 (309)
T 3p86_A 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKY 176 (309)
T ss_dssp EEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC---TTC
T ss_pred EEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe---CCC
Confidence 999999999999999999999999884321 123899999999999999999999999 99999999999998 478
Q ss_pred CeEEEeeccccccCCCC-CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+.......+.....
T Consensus 177 ~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~ 256 (309)
T 3p86_A 177 TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256 (309)
T ss_dssp CEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCC
T ss_pred cEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence 99999999997654332 23456899999999998765 58899999999999999999999998888777776654443
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc--Ccccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~--hp~~~~~ 373 (574)
... ....+++.+.+||.+||..||.+|||+.++++ .+|++..
T Consensus 257 ~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 257 RLE--IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCC--CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 322 22468899999999999999999999999987 5666543
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=376.95 Aligned_cols=256 Identities=31% Similarity=0.508 Sum_probs=210.5
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|.+.+.||+|+||.||+|+++.+|+.||||++.... ........+.+|+.+++.+ +||||++
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~iv~ 87 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-------------QSEIFAKRAYRELLLLKHM-QHENVIG 87 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-------------SSHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-------------cchHHHHHHHHHHHHHHhc-CCCCccc
Confidence 4568999999999999999999999999999999986531 1123456788999999999 5999999
Q ss_pred EEEEEEcCCE------EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDNY------VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~~------~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++++...+. +|+||||+. ++|.+.+ ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~-- 160 (353)
T 3coi_A 88 LLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-- 160 (353)
T ss_dssp CSEEECSCSSGGGCCCCEEEEECCS-EEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC--
T ss_pred HhheEecccccccceeEEEEecccc-CCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC--
Confidence 9999987654 599999996 5887655 24599999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++...... ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 161 -~~~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~ 237 (353)
T 3coi_A 161 -EDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237 (353)
T ss_dssp -TTCCEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHH
T ss_pred -CCCcEEEeecccccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 4789999999999865432 345689999999999865 46889999999999999999999998887666555554
Q ss_pred hCC-----------------------CCC----CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 326 RNK-----------------------PDF----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 326 ~~~-----------------------~~~----~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
... +.. ....++.+++++.+||.+||..||.+|||+.++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence 310 000 112235678999999999999999999999999999999864
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=364.56 Aligned_cols=258 Identities=26% Similarity=0.430 Sum_probs=207.8
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|.....||+|+||.||+|.+..+++.||||.+.... ....+.+.+|+.+++.+ +||||++++++
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~~e~~~l~~l-~h~~iv~~~~~ 87 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---------------SRYSQPLHEEIALHKHL-KHKNIVQYLGS 87 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---------------C---HHHHHHHHHHHTC-CCTTBCCEEEE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---------------hHHHHHHHHHHHHHHhC-CCCCEeeEeeE
Confidence 444558999999999999999999999999986541 12346788999999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+...+.+++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++. .++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~ 165 (295)
T 2clq_A 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKIS 165 (295)
T ss_dssp EEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEEC
T ss_pred EEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEe
Confidence 999999999999999999999885542 235679999999999999999999999999999999999984 36799999
Q ss_pred eeccccccCCCC-CccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCChhHH-HHHHHhCCCCC
Q 008197 257 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDF 331 (574)
Q Consensus 257 DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~-~~~i~~~~~~~ 331 (574)
|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||........ ........ .
T Consensus 166 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~ 243 (295)
T 2clq_A 166 DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--V 243 (295)
T ss_dssp CTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--C
T ss_pred ecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--c
Confidence 999998764322 23456899999999998653 67899999999999999999999976433222 11111111 1
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.......+++++.+||.+||..||.+|||+.++|+||||+....
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred cccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence 12223568899999999999999999999999999999986543
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-45 Score=366.20 Aligned_cols=259 Identities=26% Similarity=0.485 Sum_probs=208.4
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC-CCCc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG-HENV 171 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~-hpni 171 (574)
...++|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+.+|+.+++.+.+ ||||
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l~~~~~~i 90 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-------------ADNQTLDSYRNEIAYLNKLQQHSDKI 90 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-------------CCHHHHHHHHHHHHHHHHHGGGCTTB
T ss_pred eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-------------ccccchHHHHHHHHHHHhccccCCce
Confidence 34568999999999999999999975 58899999986542 112345678999999999963 6999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++...+.+|+||| +.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++ ++
T Consensus 91 v~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~ 163 (313)
T 3cek_A 91 IRLYDYEITDQYIYMVME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DG 163 (313)
T ss_dssp CCEEEEEECSSEEEEEEC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TT
T ss_pred EEEEEEeecCCEEEEEEe-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CC
Confidence 999999999999999999 558899998854 46799999999999999999999999999999999999996 47
Q ss_pred CeEEEeeccccccCCCCC---ccccccCccccchHhhhc------------CCCCCcchHhHHHHHHHHHhCCCCCCCCC
Q 008197 252 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKT 316 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~------------~~~~~~DvwSlG~il~elltg~~Pf~~~~ 316 (574)
.+||+|||++........ ....+||+.|+|||++.+ .++.++|||||||++|+|++|+.||....
T Consensus 164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (313)
T 3cek_A 164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243 (313)
T ss_dssp EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence 899999999987643321 235579999999999864 45778999999999999999999997654
Q ss_pred hh-HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 317 ED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 317 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. .....+......... ....++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 244 NQISKLHAIIDPNHEIEF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp SHHHHHHHHHCTTSCCCC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred HHHHHHHHHHhcccccCC--cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence 32 334444443322221 234578899999999999999999999999999998643
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=366.69 Aligned_cols=259 Identities=24% Similarity=0.366 Sum_probs=196.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.++.+|+.||||++...... ....+.+..+..+++.+ +||||++++
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~h~~i~~~~ 90 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-------------EENKRILMDLDVVLKSH-DCPYIVQCF 90 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-------------HHHHHHHHHHHHHHHTT-TCTTBCCEE
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-------------hHHHHHHHHHHHHHHhc-CCCceeeEE
Confidence 5799999999999999999999999999999998764210 11122333444456666 699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++...+.+|+||||+ ++. ...+.......+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+|
T Consensus 91 ~~~~~~~~~~lv~e~~-~~~-~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~k 165 (318)
T 2dyl_A 91 GTFITNTDVFIAMELM-GTC-AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIK 165 (318)
T ss_dssp EEEECSSEEEEEECCC-SEE-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTSCEE
T ss_pred EEEecCCcEEEEEecc-CCc-HHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCCCEE
Confidence 9999999999999999 444 4455444467899999999999999999999995 999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~ 327 (574)
|+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|+.||... ........+...
T Consensus 166 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 245 (318)
T 2dyl_A 166 LCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE 245 (318)
T ss_dssp ECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS
T ss_pred EEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc
Confidence 99999998765555555668999999999984 34578899999999999999999999774 445566666665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..... +....+++++.+||.+||..||.+|||+.++++||||+...
T Consensus 246 ~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (318)
T 2dyl_A 246 EPPLL-PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE 291 (318)
T ss_dssp CCCCC-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred CCCCC-CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence 43322 22346889999999999999999999999999999998643
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=376.88 Aligned_cols=255 Identities=24% Similarity=0.315 Sum_probs=210.2
Q ss_pred cccceeecccccccCCeEEEEEE-----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
..++|++++.||+|+||.||+|+ +..+++.||||++.... .....+.+.+|+.++.++.+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h 85 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--------------THSEHRALMSELKILIHIGHH 85 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHCCC
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--------------CHHHHHHHHHHHHHHHhhcCC
Confidence 34689999999999999999998 55677899999997541 123356789999999999779
Q ss_pred CCcceEEEEEEcCC-EEEEEEeccCCCchHHHHHhhcC------------------------------------------
Q 008197 169 ENVVKFYNAFEDDN-YVYIAMELCEGGELLDRILAKKD------------------------------------------ 205 (574)
Q Consensus 169 pniv~~~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~------------------------------------------ 205 (574)
|||+++++++.+.+ .+++|||||+||+|.+++.....
T Consensus 86 pniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp TTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred cceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 99999999998754 59999999999999998865432
Q ss_pred ----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 206 ----------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 206 ----------------------~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---KNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC---CCcEEEEeccceee
Confidence 12899999999999999999999999999999999999984 77899999999986
Q ss_pred cCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCC
Q 008197 264 IKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 338 (574)
Q Consensus 264 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 338 (574)
..... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+..........+........ ...
T Consensus 243 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 320 (359)
T 3vhe_A 243 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDY 320 (359)
T ss_dssp TTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCC--CTT
T ss_pred ecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCC--CCC
Confidence 54332 2335678999999998864 56889999999999999998 99999887765555544444332222 245
Q ss_pred CCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 339 ISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 339 ~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+++++.++|.+||..||.+|||+.++++|
T Consensus 321 ~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 321 TTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 78999999999999999999999999875
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=368.67 Aligned_cols=261 Identities=22% Similarity=0.328 Sum_probs=198.4
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..++|++.+.||+|+||.||+|.+..++. .||||++.... ......+.+.+|+.+++.+ +|||
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~ 86 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI-------------IASSDIEEFLREAACMKEF-DHPH 86 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------------------CHHHHHHHHHHHHHTTC-CCTT
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccc-------------cCHHHHHHHHHHHHHHHHC-CCCc
Confidence 34689999999999999999999877765 89999987541 1123456789999999999 5999
Q ss_pred cceEEEEEEcCCEE------EEEEeccCCCchHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCC
Q 008197 171 VVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKKD----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 240 (574)
Q Consensus 171 iv~~~~~~~~~~~~------~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~ 240 (574)
|+++++++...... ++||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+
T Consensus 87 iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~ 166 (323)
T 3qup_A 87 VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166 (323)
T ss_dssp BCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred eehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcc
Confidence 99999999877655 999999999999998865432 25899999999999999999999999999999999
Q ss_pred cEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCC
Q 008197 241 NFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDK 315 (574)
Q Consensus 241 Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~ 315 (574)
|||++ .++.+||+|||+|........ .....+|+.|+|||++.+. ++.++|||||||++|+|++ |..||.+.
T Consensus 167 NIli~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 167 NCMLA---EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp GEEEC---TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred eEEEc---CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 99998 478999999999987644322 2244678899999988654 6889999999999999999 99999998
Q ss_pred ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCC-------HHHHhcCccccccC
Q 008197 316 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-------AAQALSHPWVREGG 374 (574)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-------~~~~l~hp~~~~~~ 374 (574)
........+...... ...+.+++++.+||.+||..||.+||| +++++.|||+....
T Consensus 244 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 244 ENAEIYNYLIGGNRL---KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS 306 (323)
T ss_dssp CGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred ChHHHHHHHhcCCCC---CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence 888888887765432 223568899999999999999999999 78888999998643
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=378.37 Aligned_cols=264 Identities=25% Similarity=0.434 Sum_probs=209.7
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--------
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-------- 166 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-------- 166 (574)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+++.+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~e~~~l~~l~~~~~~~~~ 81 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----------------VYTEAAEDEIKLLQRVNDADNTKED 81 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----------------HHHHHHHHHHHHHHHHHHTCCSHHH
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----------------cchhhhhHHHHHHHHhhcccccchh
Confidence 468999999999999999999999999999999987542 23456788999998874
Q ss_pred --CCCCcceEEEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCC
Q 008197 167 --GHENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKP 239 (574)
Q Consensus 167 --~hpniv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp 239 (574)
.||||+++++++...+ .+++||||+ +++|.+++.......+++..+..++.||+.||.|||++ ||+||||||
T Consensus 82 ~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp 160 (373)
T 1q8y_A 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP 160 (373)
T ss_dssp HHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSG
T ss_pred ccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCCh
Confidence 2899999999998654 899999999 89999998766667799999999999999999999998 999999999
Q ss_pred CcEEEccC---CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCC
Q 008197 240 ENFLFKSA---KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDK 315 (574)
Q Consensus 240 ~Nill~~~---~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~ 315 (574)
+|||++.. ...+.+||+|||++...... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.
T Consensus 161 ~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 161 ENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp GGEEEEEEETTTTEEEEEECCCTTCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred HHeEEeccCCCcCcceEEEcccccccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999632 13457999999999876432 3455899999999998764 688999999999999999999999765
Q ss_pred Ch------hHHHHHHHhCCCCCCC--------------------------------------CCCCCCCHHHHHHHHHcc
Q 008197 316 TE------DGIFKEVLRNKPDFRR--------------------------------------KPWPSISNSAKDFVKKLL 351 (574)
Q Consensus 316 ~~------~~~~~~i~~~~~~~~~--------------------------------------~~~~~~~~~~~~li~~~L 351 (574)
.. ......+.......+. ...+.+++++.+||.+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 318 (373)
T 1q8y_A 239 EGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPML 318 (373)
T ss_dssp ------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGG
T ss_pred cccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHh
Confidence 42 2222222211000000 000123567889999999
Q ss_pred ccCCCCCCCHHHHhcCccccccCCCC
Q 008197 352 VKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 352 ~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
+.||.+|||+.++|+||||++.....
T Consensus 319 ~~dP~~Rpt~~ell~hp~f~~~~~~~ 344 (373)
T 1q8y_A 319 QLDPRKRADAGGLVNHPWLKDTLGME 344 (373)
T ss_dssp CSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred ccCccccCCHHHHhhChhhhcccCcc
Confidence 99999999999999999999865443
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=357.90 Aligned_cols=247 Identities=21% Similarity=0.369 Sum_probs=212.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+. +++.||||++.... ...+.+.+|+.+++++ +||||++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~~~ 71 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA----------------MSEEDFIEEAEVMMKL-SHPKLVQLY 71 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTS----------------BCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccc----------------cCHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 57999999999999999999976 57789999987642 1235688999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+|+||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~---~~~~kl 147 (269)
T 4hcu_A 72 GVCLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE---NQVIKV 147 (269)
T ss_dssp EEECSSSSEEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG---GGCEEE
T ss_pred EEEecCCceEEEEEeCCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcC---CCCEEe
Confidence 999999999999999999999998744 3456999999999999999999999999999999999999984 678999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++....... ......||+.|+|||++. ..++.++|||||||++|+|++ |+.||...........+.......
T Consensus 148 ~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (269)
T 4hcu_A 148 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 227 (269)
T ss_dssp CCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC
T ss_pred ccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCC
Confidence 9999998654322 223456788999999987 456889999999999999999 999999988888888877653322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
. ....++.+.++|.+||..||.+|||+.++++|
T Consensus 228 ~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 228 K---PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp C---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 2 24578999999999999999999999999874
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=373.67 Aligned_cols=253 Identities=18% Similarity=0.262 Sum_probs=205.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++.|.+||||++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~E~~~l~~l~~h~~i~~ 69 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-----------------RAPQLHLEYRFYKQLGSGDGIPQ 69 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-----------------SSCCHHHHHHHHHHHCSCTTSCC
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-----------------chHHHHHHHHHHHHhhCCCCCCE
Confidence 4468999999999999999999999999999999986531 12347899999999966999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC--CC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE--DS 251 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~--~~ 251 (574)
+++++...+..++||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++..+. ..
T Consensus 70 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~ 147 (330)
T 2izr_A 70 VYYFGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQ 147 (330)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTT
T ss_pred EEEEEecCCccEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCc
Confidence 999999999999999999 99999987543 467999999999999999999999999999999999999984211 12
Q ss_pred CeEEEeeccccccCCCCC--------ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChh---H
Q 008197 252 SLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED---G 319 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~---~ 319 (574)
.+||+|||+|........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.... +
T Consensus 148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~ 227 (330)
T 2izr_A 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE 227 (330)
T ss_dssp SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH
T ss_pred eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH
Confidence 399999999986543221 2467899999999998764 588999999999999999999999875433 3
Q ss_pred HHHHHHhCCCCCCCCC-CCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 IFKEVLRNKPDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+..+.......+... ...+| ++.+||..||..||.+||++.++++
T Consensus 228 ~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 228 RYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 3444433322221111 12244 8999999999999999999998865
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=373.24 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=215.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCC-------CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKAN-------GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~ 166 (574)
..++|.+++.||+|+||.||+|.+..+ +..||||++.... .......+.+|+.+++.+.
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~ 132 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--------------TEKDLSDLISEMEMMKMIG 132 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHC
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--------------CHHHHHHHHHHHHHHHHhc
Confidence 346899999999999999999997543 3579999987541 1234567899999999996
Q ss_pred CCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 008197 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGL 232 (574)
Q Consensus 167 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i 232 (574)
+||||+++++++...+.+|+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||
T Consensus 133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 212 (382)
T 3tt0_A 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC 212 (382)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 69999999999999999999999999999999886543 2459999999999999999999999999
Q ss_pred EeecCCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-
Q 008197 233 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC- 307 (574)
Q Consensus 233 iHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt- 307 (574)
+||||||+|||++ .++.+||+|||+|....... ......||+.|+|||++.+. ++.++|||||||++|+|++
T Consensus 213 vH~Dlkp~NIll~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~ 289 (382)
T 3tt0_A 213 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289 (382)
T ss_dssp CCSCCCGGGEEEC---TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCcceEEEc---CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhC
Confidence 9999999999998 47899999999998765432 23445788999999988654 5889999999999999999
Q ss_pred CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 308 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 308 g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
|..||.+....++...+..+... .....+++++.+||.+||..||.+|||+.+++++
T Consensus 290 g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 290 GGSPYPGVPVEELFKLLKEGHRM---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346 (382)
T ss_dssp SCCSSTTCCHHHHHHHHHTTCCC---CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHcCCCC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999988888777777665422 1225688999999999999999999999999874
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=354.82 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=212.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.+++.+ +||||+++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~~ 68 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS----------------MSEDEFFQEAQTMMKL-SHPKLVKF 68 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT----------------BCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC----------------CcHHHHHHHHHHHHhC-CCCCEeeE
Confidence 358999999999999999999865 56789999987642 1335688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+++||||+++++|.+++... ...+++..+..++.||+.||.|||+.||+||||||+|||++ .++.+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~ 144 (268)
T 3sxs_A 69 YGVCSKEYPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCVK 144 (268)
T ss_dssp EEEECSSSSEEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC---TTCCEE
T ss_pred EEEEccCCceEEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC---CCCCEE
Confidence 99999999999999999999999988543 34699999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+......
T Consensus 145 l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~ 224 (268)
T 3sxs_A 145 VSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRL 224 (268)
T ss_dssp ECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred EccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCC
Confidence 999999987654332 234466788999999876 46889999999999999999 99999888888777777765533
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
... ...++.+.+||.+||..||.+|||+.+++++
T Consensus 225 ~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 225 YRP---HLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp CCC---TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCC---CcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 322 3468999999999999999999999999875
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=369.18 Aligned_cols=259 Identities=29% Similarity=0.509 Sum_probs=213.5
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-CCCC
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-GHEN 170 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-~hpn 170 (574)
+.+.++|++.+.||+|+||.||+|++..+|+.||||++........ . .......+.+|+.+++.+. .|||
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------~--~~~~~~~~~~E~~~l~~l~~~~~~ 109 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------G--ELPNGTRVPMEVVLLKKVSSGFSG 109 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE-------E--ECTTCCEEEHHHHHHHHHCSSSCS
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh-------h--hhhhhhHHHHHHHHHHhhccCCCC
Confidence 4466789999999999999999999999999999999976521100 0 0011234568999999996 3699
Q ss_pred cceEEEEEEcCCEEEEEEeccCC-CchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
|+++++++...+.+++||||+.+ ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++. .
T Consensus 110 i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~ 185 (320)
T 3a99_A 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--N 185 (320)
T ss_dssp BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--T
T ss_pred ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--C
Confidence 99999999999999999999976 899998854 367999999999999999999999999999999999999983 3
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
++.+||+|||++...... ......||+.|+|||++.+.. +.++|||||||++|+|++|+.||.... .+...
T Consensus 186 ~~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~ 258 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRG 258 (320)
T ss_dssp TTEEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHC
T ss_pred CCCEEEeeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcc
Confidence 678999999999876543 334568999999999886543 567899999999999999999996532 23333
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
...+ .+.+++++.+||.+||..||.+|||+.++++||||++..
T Consensus 259 ~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 259 QVFF----RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp CCCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred cccc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 3222 246889999999999999999999999999999998753
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=361.98 Aligned_cols=245 Identities=23% Similarity=0.348 Sum_probs=204.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|.+++.||+|+||.||+|.+..+|+.||+|++... .....+.+.+|+.+++.+ +||||++++
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---------------~~~~~~~~~~E~~~l~~l-~hp~iv~~~ 73 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---------------DEETQRTFLKEVKVMRCL-EHPNVLKFI 73 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---------------CHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---------------CHHHHHHHHHHHHHHHhC-CCcCcccEE
Confidence 5799999999999999999999999999999988543 123456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++..++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~---~~~~~kl 149 (310)
T 3s95_A 74 GVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVV 149 (310)
T ss_dssp EEEEETTEEEEEEECCTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC---TTSCEEE
T ss_pred EEEecCCeeEEEEEecCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC---CCCCEEE
Confidence 999999999999999999999998754 346799999999999999999999999999999999999998 4788999
Q ss_pred EeeccccccCCCCCc---------------cccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhH
Q 008197 256 TDFGLSDFIKPGKKF---------------QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDG 319 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~---------------~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~ 319 (574)
+|||++......... ...+||+.|+|||++.+. ++.++|||||||++|+|++|..||.......
T Consensus 150 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 229 (310)
T 3s95_A 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229 (310)
T ss_dssp CCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC
T ss_pred eecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH
Confidence 999999765432211 156899999999998764 5889999999999999999999986532211
Q ss_pred -----HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 -----IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 -----~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......... ..+.+++.+.+||.+||..||.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 230 MDFGLNVRGFLDRY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp TTSSBCHHHHHHHT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhhhhcccccc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 111111111 12457889999999999999999999999976
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=370.36 Aligned_cols=260 Identities=23% Similarity=0.340 Sum_probs=190.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHH-HHHHhcCCCCcceE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVK-ILQALAGHENVVKF 174 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-il~~l~~hpniv~~ 174 (574)
++|++.+.||+|+||.||+|.++.+|+.||||++.... .......+..|+. +++.+ +||||+++
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~~~~~~-~h~niv~~ 86 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--------------DEKEQKQLLMDLDVVMRSS-DCPYIVQF 86 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--------------CHHHHHHHHHHHHHHHSSC-CCTTBCCE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--------------CchHHHHHHHHHHHHHHcC-CCCcEeee
Confidence 58999999999999999999999999999999987541 1123345666766 44445 79999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCEeecCCCCcEEEccCCCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILA---KKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~ 250 (574)
++++...+..++||||+++ +|.+.+.. .....+++..+..++.|++.||.|||+. ||+||||||+|||++ .+
T Consensus 87 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~ 162 (327)
T 3aln_A 87 YGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RS 162 (327)
T ss_dssp EEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TT
T ss_pred eeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CC
Confidence 9999999999999999975 77776642 2356799999999999999999999999 999999999999998 47
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhh-----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEV 324 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i 324 (574)
+.+||+|||++.............||+.|+|||++. ..++.++|||||||++|+|++|+.||.+.... .....+
T Consensus 163 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 242 (327)
T 3aln_A 163 GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV 242 (327)
T ss_dssp TEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC
T ss_pred CCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH
Confidence 899999999998765554445568999999999983 34688999999999999999999999764321 222222
Q ss_pred HhCC-CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 325 LRNK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..+. +.+....+..+++.+.+||.+||..||.+|||+.++++||||....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 293 (327)
T 3aln_A 243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE 293 (327)
T ss_dssp CCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred hcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence 2221 1222223356889999999999999999999999999999998643
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=358.37 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=216.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|.+..++..||||++.... ...+.+.+|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~ 73 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMKEI-KHPNLVQ 73 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----------------THHHHHHHHHHHHHHC-CCTTBCC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----------------HHHHHHHHHHHHHHhC-CCCCEee
Confidence 4468999999999999999999999999999999987542 2456788999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+.+.+|+||||++|++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++ .++.+
T Consensus 74 ~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~ 150 (288)
T 3kfa_A 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLV 150 (288)
T ss_dssp EEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCE
T ss_pred EEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCE
Confidence 999999999999999999999999998766667799999999999999999999999999999999999998 46789
Q ss_pred EEEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
||+|||++........ .....||+.|+|||++.+ .++.++||||||+++|+|++ |..||.+.........+.....
T Consensus 151 ~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~ 230 (288)
T 3kfa_A 151 KVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 230 (288)
T ss_dssp EECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred EEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC
Confidence 9999999987654332 234567889999998864 56889999999999999999 9999988887777776655432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+++.+.+||.+||..||.+|||+.++++
T Consensus 231 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 231 ---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 2223568899999999999999999999999965
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=359.62 Aligned_cols=247 Identities=29% Similarity=0.566 Sum_probs=199.1
Q ss_pred cccceeec-ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTIG-KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~~-~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+.++|.+. +.||+|+||.||+|.+..+|+.||||++... ..+.+|+.++.++.+||||+
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------------~~~~~e~~~~~~~~~h~~i~ 74 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------------PKARREVELHWRASQCPHIV 74 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------------------HHHHHHHHHHHHHTTSTTBC
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------------------HHHHHHHHHHHHhccCCCch
Confidence 44567777 7899999999999999999999999998643 34678999886666799999
Q ss_pred eEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 173 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 173 ~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
++++++.. ...+|+||||++||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++...
T Consensus 75 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 154 (299)
T 3m2w_A 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 154 (299)
T ss_dssp CEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS
T ss_pred hHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCC
Confidence 99999987 77899999999999999998766556799999999999999999999999999999999999999644
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh--
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~-- 326 (574)
.++.+||+|||++..... ..++.++|||||||++|+|++|+.||.+.........+..
T Consensus 155 ~~~~~kl~Dfg~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 214 (299)
T 3m2w_A 155 PNAILKLTDFGFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 214 (299)
T ss_dssp TTCCEEECCCTTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSS
T ss_pred CCCcEEEecccccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHH
Confidence 478999999999875432 2246689999999999999999999976654332211111
Q ss_pred --CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCC
Q 008197 327 --NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380 (574)
Q Consensus 327 --~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~ 380 (574)
....++...+..+++++.+||.+||..||.+|||+.++++||||+........+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~ 270 (299)
T 3m2w_A 215 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270 (299)
T ss_dssp CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence 111111112256889999999999999999999999999999999866544443
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=368.43 Aligned_cols=256 Identities=25% Similarity=0.329 Sum_probs=212.0
Q ss_pred ccceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|.+.+.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++++.+||
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~hp 109 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--------------DSSEREALMSELKMMTQLGSHE 109 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------------------CHHHHHHHHHHHHHCCCT
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--------------CHHHHHHHHHHHHHHHhhcCCC
Confidence 468999999999999999999973 456789999987541 1123467899999999995699
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHH
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECH 228 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~l~~LH 228 (574)
||+++++++...+.+|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||
T Consensus 110 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 189 (344)
T 1rjb_A 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 189 (344)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred CeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998865432 24899999999999999999999
Q ss_pred HCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHH
Q 008197 229 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYI 304 (574)
Q Consensus 229 ~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~e 304 (574)
++||+||||||+|||++ .++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+
T Consensus 190 ~~~ivH~Dikp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~e 266 (344)
T 1rjb_A 190 FKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE 266 (344)
T ss_dssp HTTEEETTCSGGGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred hCCcccCCCChhhEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHH
Confidence 99999999999999998 478999999999986643322 234578889999998754 56889999999999999
Q ss_pred HHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 305 LLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 305 llt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
|++ |..||.+......+..++........ ...+++++.+||.+||..||.+|||+.+++++..
T Consensus 267 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 267 IFSLGVNPYPGIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp HTTTSCCSSTTCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHcCCCCCcccCCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 998 99999888766666666655433222 2457899999999999999999999999988644
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=353.82 Aligned_cols=252 Identities=27% Similarity=0.375 Sum_probs=200.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+ +|..||||++..... .......+.+.+|+.+++.+ +||||++++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~-----------~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~ 72 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPD-----------EDISQTIENVRQEAKLFAML-KHPNIIALR 72 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC---------------------CHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred hheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCc-----------ccHHHHHHHHHHHHHHHHhc-CCCCEeeEE
Confidence 5799999999999999999986 488999999876421 11123356788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CEeecCCCCcEEEccCC----
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAK---- 248 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~---- 248 (574)
+++.+.+.+++||||+++++|.+++ ....+++..+..++.||+.||.|||++| |+||||||+|||++...
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~ 149 (271)
T 3dtc_A 73 GVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD 149 (271)
T ss_dssp EEECCC--CEEEEECCTTEEHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSC
T ss_pred EEEecCCceEEEEEcCCCCCHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccc
Confidence 9999999999999999999998877 2457999999999999999999999999 99999999999998422
Q ss_pred -CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 249 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 249 -~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+||+|||++........ ....||+.|+|||++.+. ++.++||||||+++|+|++|+.||.+.........+..
T Consensus 150 ~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 228 (271)
T 3dtc_A 150 LSNKILKITDFGLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228 (271)
T ss_dssp CSSCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT
T ss_pred ccCcceEEccCCcccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc
Confidence 267899999999986654332 356899999999988654 58889999999999999999999998887777776666
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
....... ...+++.+.+||.+||..||.+|||+.+++++
T Consensus 229 ~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 229 NKLALPI--PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp SCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCC--CcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 5543322 25678999999999999999999999999864
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=362.02 Aligned_cols=253 Identities=26% Similarity=0.328 Sum_probs=212.6
Q ss_pred ccceeecccccccCCeEEEEEEE-----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|++.+.||+|+||.||+|.+ ..+++.||||++.... .....+.+.+|+.+++++.+||
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h~ 87 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--------------HLTEREALMSELKVLSYLGNHM 87 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHCCCT
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--------------hHHHHHHHHHHHHHHhhcccCC
Confidence 36899999999999999999985 4577899999987541 1224567899999999996699
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCE
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD----------------SRYTEKDAAVVVRQMLRVAAECHLHGLV 233 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~l~~LH~~~ii 233 (574)
||+++++++...+..++||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+
T Consensus 88 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 167 (313)
T 1t46_A 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 167 (313)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 999999999999999999999999999998865432 2589999999999999999999999999
Q ss_pred eecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-C
Q 008197 234 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-G 308 (574)
Q Consensus 234 HrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g 308 (574)
||||||+|||++ .++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |
T Consensus 168 H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 244 (313)
T 1t46_A 168 HRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244 (313)
T ss_dssp CSCCSGGGEEEE---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred cCCCccceEEEc---CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence 999999999998 478999999999987654432 234567889999998754 56889999999999999999 9
Q ss_pred CCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 309 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..||.+..........+....... ....+++.+.+||.+||..||.+|||+.++++
T Consensus 245 ~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 245 SSPYPGMPVDSKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp CCSSTTCCSSHHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCcccchhHHHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 999988776655555554433222 23568899999999999999999999999976
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=362.10 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=209.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|.+..+|+.||||++.... ..+.+.+|+.+++.+.+|||++
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~e~~~~~~l~~~~~i~ 69 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----------------DAPQLRDEYRTYKLLAGCTGIP 69 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----------------TSCCHHHHHHHHHHTTTCTTCC
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----------------ccHHHHHHHHHHHHHhcCCCCC
Confidence 35678999999999999999999999999999999986531 1234778999999997799999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--CC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--ED 250 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--~~ 250 (574)
++++++......++||||+ +++|.+++... ..++++..+..++.||+.||.|||++||+||||||+|||++..+ ..
T Consensus 70 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~ 147 (298)
T 1csn_A 70 NVYYFGQEGLHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNA 147 (298)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTT
T ss_pred eEEeecCCCceeEEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCC
Confidence 9999999999999999999 99999988543 45699999999999999999999999999999999999998421 23
Q ss_pred CCeEEEeeccccccCCCC--------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC---hh
Q 008197 251 SSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---ED 318 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~---~~ 318 (574)
..+||+|||++....... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.. ..
T Consensus 148 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 227 (298)
T 1csn_A 148 NMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK 227 (298)
T ss_dssp TCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH
T ss_pred CeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH
Confidence 459999999998765432 23456899999999998764 5889999999999999999999997743 33
Q ss_pred HHHHHHHhCCCCCC-CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 319 GIFKEVLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 319 ~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+..+.......+ ....+.+|+++.+||.+||..||.+|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 228 QKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 34444433221111 1122468899999999999999999999999865
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=356.50 Aligned_cols=248 Identities=22% Similarity=0.350 Sum_probs=209.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.+++.+ +||||+++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~~ 84 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS----------------MSEDEFIEEAKVMMNL-SHEKLVQL 84 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS----------------BCHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC----------------CCHHHHHHHHHHHhcC-CCCCEeeE
Confidence 458999999999999999999875 67789999987642 1235688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~~~k 160 (283)
T 3gen_A 85 YGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVK 160 (283)
T ss_dssp EEEECSSSSEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTSCEE
T ss_pred EEEEecCCCeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCCCEE
Confidence 99999999999999999999999988542 35699999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCC--CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++....... ......||+.|+|||++. ..++.++|||||||++|+|++ |+.||...........+......
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~ 240 (283)
T 3gen_A 161 VSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 240 (283)
T ss_dssp ECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC
T ss_pred EccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCC
Confidence 99999998654321 123446788999999886 456889999999999999998 99999988888887777765433
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.. ....++.+.+||.+||..||.+|||+.++++|
T Consensus 241 ~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 241 YR---PHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp CC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CC---CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 22 24568999999999999999999999999875
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=379.04 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=210.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|.+.+.||+|+||.||+|++..+|+.||||++..... ....+.+.+|+.+++.+ +||||+
T Consensus 6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~~~~~~E~~~l~~l-~hpnIv 70 (396)
T 4eut_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--------------LRPVDVQMREFEVLKKL-NHKNIV 70 (396)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--------------GSCHHHHHHHHHHHHHC-CCTTBC
T ss_pred CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--------------cchHHHHHHHHHHHHhc-CCCCCC
Confidence 356789999999999999999999999999999999875421 12346678999999999 599999
Q ss_pred eEEEEEEcCC--EEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc-CC
Q 008197 173 KFYNAFEDDN--YVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AK 248 (574)
Q Consensus 173 ~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~-~~ 248 (574)
++++++...+ ..|+|||||+||+|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+.. .+
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~ 150 (396)
T 4eut_A 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED 150 (396)
T ss_dssp CEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTT
T ss_pred eEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCC
Confidence 9999998754 7899999999999999885432 234999999999999999999999999999999999999831 12
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc---------CCCCCcchHhHHHHHHHHHhCCCCCCC----C
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPFWD----K 315 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~DvwSlG~il~elltg~~Pf~~----~ 315 (574)
..+.+||+|||+|............+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.. .
T Consensus 151 ~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 230 (396)
T 4eut_A 151 GQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230 (396)
T ss_dssp SCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT
T ss_pred CceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc
Confidence 466799999999988766655667789999999998863 446789999999999999999999964 2
Q ss_pred ChhHHHHHHHhCCCCCCC-----------------CCC----CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 316 TEDGIFKEVLRNKPDFRR-----------------KPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 316 ~~~~~~~~i~~~~~~~~~-----------------~~~----~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
...+....++.+.+.... +.. ..+++.+.+||.+||..||++|||+.++++
T Consensus 231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 231 RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp TCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred chHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 334566666665532110 000 123456889999999999999999999754
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=365.66 Aligned_cols=261 Identities=21% Similarity=0.266 Sum_probs=214.8
Q ss_pred cccceeecccccccCCeEEEEEE-----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
..++|++++.||+|+||.||+|+ +..++..||||++.... .......+.+|+.+++.+ +|
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h 92 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--------------SEQDELDFLMEALIISKF-NH 92 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--------------CHHHHHHHHHHHHHHHHC-CC
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--------------chhhHHHHHHHHHHHhhC-CC
Confidence 45689999999999999999998 55678899999986431 123445788999999999 59
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
|||+++++++...+..|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 93 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIl 172 (327)
T 2yfx_A 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCL 172 (327)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred CCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEE
Confidence 9999999999999999999999999999998865432 45899999999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChh
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTED 318 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~ 318 (574)
++..+....+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||......
T Consensus 173 i~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 252 (327)
T 2yfx_A 173 LTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252 (327)
T ss_dssp ESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred EecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH
Confidence 9865556789999999997543222 2234578999999998854 56889999999999999998 99999888877
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.....+..+... ...+.+++.+.+||.+||..||.+|||+.+++++.|+-.
T Consensus 253 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 253 EVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 777777665432 223568899999999999999999999999999988653
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=362.68 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=213.4
Q ss_pred ccceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|.+.+.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+ +||
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~hp 86 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--------------SPSELRDLLSEFNVLKQV-NHP 86 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--------------CHHHHHHHHHHHHHHTTC-CCT
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--------------CHHHHHHHHHHHHHHhhC-CCC
Confidence 468999999999999999999873 456899999987531 123456789999999999 599
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHH
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD----------------------SRYTEKDAAVVVRQMLRVAAEC 227 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~l~~L 227 (574)
||+++++++.+.+.+++||||+++|+|.+++..... ..+++..+..++.||+.||.||
T Consensus 87 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 166 (314)
T 2ivs_A 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL 166 (314)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH
T ss_pred ceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998865432 3489999999999999999999
Q ss_pred HHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhcC-CCCCcchHhHHHHHH
Q 008197 228 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITY 303 (574)
Q Consensus 228 H~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ 303 (574)
|++||+||||||+|||++ .++.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|
T Consensus 167 H~~~ivH~dikp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 243 (314)
T 2ivs_A 167 AEMKLVHRDLAARNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW 243 (314)
T ss_dssp HHTTEECCCCSGGGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred HHCCCcccccchheEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHH
Confidence 999999999999999998 478899999999986643322 2345678899999988654 588999999999999
Q ss_pred HHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 304 ILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 304 ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+|++ |..||.+.........+...... .....+++.+.+||.+||..||.+|||+.+++++
T Consensus 244 el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 244 EIVTLGGNPYPGIPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhCCCCCCCCCCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999 99999988887777766655322 2235688999999999999999999999999763
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=360.52 Aligned_cols=252 Identities=24% Similarity=0.379 Sum_probs=203.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+.+|+.+++.+ +||||++++
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~hp~iv~~~ 100 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS------------SDPVFRTRMQREARTAGRL-QEPHVVPIH 100 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG------------GSHHHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc------------cCHHHHHHHHHHHHHHhhc-CCCCeeEEE
Confidence 579999999999999999999999999999999875421 1223456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++.+|+||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 101 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl 175 (309)
T 2h34_A 101 DFGEIDGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYL 175 (309)
T ss_dssp EEEEETTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEE
T ss_pred EEEeeCCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEE
Confidence 9999999999999999999999988543 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||.+...... ...+......+
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 254 (309)
T 2h34_A 176 VDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHINQAIPRP 254 (309)
T ss_dssp CSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHHSCCCCG
T ss_pred ecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhccCCCCc
Confidence 9999997654332 2335689999999998865 458899999999999999999999987665533 34444433333
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCC-CHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARL-TAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rp-s~~~~l~ 366 (574)
....+.+|+.+.+||.+||..||.+|| |+.++++
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 334567899999999999999999999 7877764
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=367.97 Aligned_cols=252 Identities=20% Similarity=0.255 Sum_probs=213.1
Q ss_pred cccceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
..++|++.+.||+|+||.||+|++. .+++.||||++.... .....+.+.+|+.+++.+ +|
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h 109 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--------------SADMQADFQREAALMAEF-DN 109 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--------------CHHHHHHHHHHHHHHHTC-CC
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--------------CHHHHHHHHHHHHHHHhC-CC
Confidence 3468999999999999999999987 455899999987541 123456789999999999 59
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHH
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAE 226 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~l~~ 226 (574)
|||+++++++.+.+.+|+||||+++|+|.+++.... ...+++..++.++.||+.||.|
T Consensus 110 p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~ 189 (343)
T 1luf_A 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY 189 (343)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999886532 1579999999999999999999
Q ss_pred HHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCC---CCccccccCccccchHhhhc-CCCCCcchHhHHHHH
Q 008197 227 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVIT 302 (574)
Q Consensus 227 LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il 302 (574)
||++||+||||||+|||++ .++.+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++
T Consensus 190 LH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 266 (343)
T 1luf_A 190 LSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 266 (343)
T ss_dssp HHHTTCCCSCCSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHhCCeecCCCCcceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHH
Confidence 9999999999999999998 4779999999999765332 22234578999999998764 568899999999999
Q ss_pred HHHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 303 YILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 303 ~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
|+|++ |..||.+....+....+..+.... ....+++.+.+||.+||..||.+|||+.++++
T Consensus 267 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~ 328 (343)
T 1luf_A 267 WEIFSYGLQPYYGMAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328 (343)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCcCCCCChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99999 999999988888887777654322 22467899999999999999999999999975
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=356.12 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=206.7
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|++..+++.||||++........ .......+.+.+|+.+++.+ +||||++
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------~~~~~~~~~~~~E~~~l~~l-~h~~i~~ 87 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE--------TEMIEKFQEFQREVFIMSNL-NHPNIVK 87 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCC--------HHHHCCSHHHHHHHHHHTTC-CCTTBCC
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccc--------hhHHHHHHHHHHHHHHHHhC-CCCCchh
Confidence 34689999999999999999999999999999999865421100 00001126788999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCC--C
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAK--E 249 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~--~ 249 (574)
+++++.+.. ++||||+++|+|.+.+... ...+++..+..++.||+.||.|||++| |+||||||+|||++..+ .
T Consensus 88 ~~~~~~~~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~ 164 (287)
T 4f0f_A 88 LYGLMHNPP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164 (287)
T ss_dssp EEEEETTTT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTC
T ss_pred hheeecCCC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCC
Confidence 999998766 6999999999999887543 457999999999999999999999999 99999999999998421 1
Q ss_pred CCCeEEEeeccccccCCCCCccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH--HHHH
Q 008197 250 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI--FKEV 324 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~--~~~i 324 (574)
...+||+|||++..... ......||+.|+|||++.. .++.++|||||||++|+|++|+.||........ ...+
T Consensus 165 ~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 242 (287)
T 4f0f_A 165 PVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242 (287)
T ss_dssp SCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH
T ss_pred ceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH
Confidence 22499999999975432 3455689999999999843 347789999999999999999999977654443 3333
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..... .......+++.+.+||.+||..||.+|||+.++++
T Consensus 243 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 243 REEGL--RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHSCC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccCC--CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 33332 22233568899999999999999999999999975
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=373.65 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=210.2
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|.+.+.||+|+||.||+|.++.+++.||||++.... .....+.+.+|+.+|+.+ +||||+++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~hpniv~~ 177 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--------------PPDLKAKFLQEARILKQY-SHPNIVRL 177 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--------------CHHHHTTTTHHHHHHTTC-CCTTBCCE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--------------CHHHHHHHHHHHHHHHhC-CCCCEEEE
Confidence 358999999999999999999999899999999986531 122344678999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++...+.+|+||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 178 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~~~k 253 (377)
T 3cbl_A 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLK 253 (377)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEE
T ss_pred EEEEecCCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCCcEE
Confidence 99999999999999999999999988543 34689999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCc---cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
|+|||+|+........ ....+++.|+|||++.+ .++.++|||||||++|||++ |..||.+.........+..+..
T Consensus 254 l~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~ 333 (377)
T 3cbl_A 254 ISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR 333 (377)
T ss_dssp ECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCC
T ss_pred ECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 9999999865432211 12346778999998864 46889999999999999998 9999988887777666655432
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. +....+|+.+.+||.+||..||.+|||+.++++
T Consensus 334 ~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 334 L---PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 1 122457899999999999999999999999864
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=376.77 Aligned_cols=259 Identities=28% Similarity=0.472 Sum_probs=200.0
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+.+.|.+.+.||+|+||+||.+. ..+|+.||||++... ..+.+.+|+.+|+.+.+||||
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~------------------~~~~~~~E~~~l~~l~~HpnI 71 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID------------------FCDIALMEIKLLTESDDHPNV 71 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG------------------GHHHHHHHHHHHHHHTTSTTB
T ss_pred hhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH------------------HHHHHHHHHHHHHhccCCCCc
Confidence 4456778889999999999998753 578999999988653 224567899999987679999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~-----l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
+++++++.+.+.+|||||||. |+|.+++....... .++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 72 v~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~ 150 (434)
T 2rio_A 72 IRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150 (434)
T ss_dssp CCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEC
T ss_pred CeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence 999999999999999999995 69999885432111 123346789999999999999999999999999999974
Q ss_pred C----------CCCCCeEEEeeccccccCCCCC-----ccccccCccccchHhhhc--------CCCCCcchHhHHHHHH
Q 008197 247 A----------KEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITY 303 (574)
Q Consensus 247 ~----------~~~~~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il~ 303 (574)
. ..+..+||+|||+|........ ....+||+.|+|||++.+ .++.++|||||||++|
T Consensus 151 ~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ 230 (434)
T 2rio_A 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230 (434)
T ss_dssp CHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH
T ss_pred CcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHH
Confidence 2 2356899999999987654321 234689999999999864 4578899999999999
Q ss_pred HHHh-CCCCCCCCChhHHHHHHHhCCCCCCCCC---CCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 304 ILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP---WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 304 ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
+|++ |+.||.+..... ..++.+........ .+.+++++.+||.+||+.||.+|||+.++++||||..
T Consensus 231 ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 231 YILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp HHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred HHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 9999 999997654433 34555443332221 1234578999999999999999999999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=365.04 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=209.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEE--EEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRV--AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~v--aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
++|++.+.||+|+||.||+|++..+|..+ |||.+.... .....+.+.+|+.+++++.+||||++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~hp~iv~ 90 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--------------SKDDHRDFAGELEVLCKLGHHPNIIN 90 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------------------CHHHHHHHHHTTCCCCTTBCC
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--------------chHHHHHHHHHHHHHHhccCCCchhh
Confidence 57999999999999999999999888865 999886431 11234568899999999966999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
+++++.+.+.+|+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++||+||||||
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp 170 (327)
T 1fvr_A 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 170 (327)
T ss_dssp EEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred hceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCcc
Confidence 9999999999999999999999999885432 24799999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCCh
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTE 317 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~ 317 (574)
+|||++. ++.+||+|||++.............+|+.|+|||++.+. ++.++|||||||++|+|++ |+.||.+...
T Consensus 171 ~NIl~~~---~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 247 (327)
T 1fvr_A 171 RNILVGE---NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247 (327)
T ss_dssp GGEEECG---GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred ceEEEcC---CCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH
Confidence 9999984 679999999999754433333445778999999998754 5889999999999999998 9999998888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
......+..+.. ......+++.+.+||.+||..||.+|||+.+++++
T Consensus 248 ~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 294 (327)
T 1fvr_A 248 AELYEKLPQGYR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 294 (327)
T ss_dssp HHHHHHGGGTCC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHhhcCCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 777776655422 22234678999999999999999999999999874
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=358.34 Aligned_cols=251 Identities=26% Similarity=0.451 Sum_probs=213.5
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
+..+..+|++.+.||+|+||.||+|.+..+|+.||||++.... +.+.+|+.+++.+ +|||
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------------~~~~~e~~~l~~l-~h~~ 65 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------------------EKAEREVKALAKL-DHVN 65 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------------------GGGHHHHHHHHHC-CCTT
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------------------HHHHHHHHHHHhC-CCCC
Confidence 3456678999999999999999999999999999999987541 2356899999999 5999
Q ss_pred cceEEEEEEc----------------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 171 VVKFYNAFED----------------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 171 iv~~~~~~~~----------------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
|+++++++.. ...+|+||||+++|+|.+++.......+++..+..++.||+.||.|||++||+|
T Consensus 66 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 145 (284)
T 2a19_B 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIN 145 (284)
T ss_dssp BCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred EEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 9999998864 456899999999999999987666678999999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFW 313 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~ 313 (574)
|||||+|||++. ++.+||+|||++.............||+.|+|||++.+. ++.++|||||||++|+|++|..||.
T Consensus 146 ~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 146 RDLKPSNIFLVD---TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp SCCSGGGEEEEE---TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred ccCCHHHEEEcC---CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999984 778999999999877665555667899999999998764 5889999999999999999999974
Q ss_pred CCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 314 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 314 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
.. ......+..... .+.+++.+.+||.+||..||.+|||+.++++++|.-.
T Consensus 223 ~~--~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 223 ET--SKFFTDLRDGII------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HH--HHHHHHHHTTCC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred hH--HHHHHHhhcccc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 32 223333333221 1457899999999999999999999999999988654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=354.36 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=199.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..++|++.+.||+|+||.||+|.+..+ +..||||++.... .....+.+.+|+.+++.+ +|||
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~e~~~l~~l-~h~~ 77 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--------------SDSVREKFLQEALTMRQF-DHPH 77 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--------------SHHHHHHHHHHHHHHHTC-CCTT
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--------------CHHHHHHHHHHHHHHHhC-CCCc
Confidence 346899999999999999999998654 4579999886531 123456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++. ++..|+||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. +
T Consensus 78 iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~ 152 (281)
T 1mp8_A 78 IVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---N 152 (281)
T ss_dssp BCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---T
T ss_pred cceEEEEEc-cCccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECC---C
Confidence 999999985 45689999999999999988543 357999999999999999999999999999999999999984 6
Q ss_pred CCeEEEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 251 SSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..
T Consensus 153 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~ 232 (281)
T 1mp8_A 153 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232 (281)
T ss_dssp TEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred CCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc
Confidence 8899999999987654332 234467889999998864 56888999999999999996 9999998888888777766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.... ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus 233 ~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 233 GERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 5422 223578999999999999999999999999875
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-44 Score=360.78 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=214.6
Q ss_pred ccccceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
...++|++.+.||+|+||.||+|.+. .+++.||||.+.... .......+.+|+.+++.+ +
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~ 86 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--------------SMRERIEFLNEASVMKEF-N 86 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--------------CHHHHHHHHHHHHHGGGC-C
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--------------CHHHHHHHHHHHHHHHhc-C
Confidence 34578999999999999999999876 457899999987531 122345688999999999 5
Q ss_pred CCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 168 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
||||+++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||
T Consensus 87 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp 166 (322)
T 1p4o_A 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAA 166 (322)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSG
T ss_pred CCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCcc
Confidence 9999999999999999999999999999999885432 14679999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCC
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWD 314 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~ 314 (574)
+|||++ .++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+
T Consensus 167 ~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 167 RNCMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp GGEEEC---TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred ceEEEc---CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 999998 47899999999997654322 1234567899999998865 46889999999999999999 8999988
Q ss_pred CChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 315 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 315 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.........+....... ....+++.+.+||.+||..||.+|||+.+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 244 LSNEQVLRFVMEGGLLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp SCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 88877777776654321 225688999999999999999999999999885
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=356.64 Aligned_cols=247 Identities=15% Similarity=0.215 Sum_probs=204.4
Q ss_pred cccceeecccccccCCeEEEEEEEcCCC-------CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANG-------DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~ 166 (574)
..++|.+.+.||+|+||.||+|++..++ ..||+|++.... ....+.+.+|+.+++.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---------------~~~~~~~~~E~~~l~~l- 69 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---------------RNYSESFFEAASMMSKL- 69 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---------------GGGHHHHHHHHHHHHTS-
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---------------HHHHHHHHHHHHHHHhC-
Confidence 3568999999999999999999998877 479999986541 23456789999999999
Q ss_pred CCCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 167 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 167 ~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
+||||+++++++.+++..++||||++||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 70 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~ 148 (289)
T 4fvq_A 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIR 148 (289)
T ss_dssp CCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEE
T ss_pred CCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEec
Confidence 5999999999999999999999999999999988543 344899999999999999999999999999999999999985
Q ss_pred CCCCCC--------eEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCC
Q 008197 247 AKEDSS--------LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKT 316 (574)
Q Consensus 247 ~~~~~~--------vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~ 316 (574)
++. +||+|||++..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..|+....
T Consensus 149 ---~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~ 222 (289)
T 4fvq_A 149 ---EEDRKTGNPPFIKLSDPGISITVLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL 222 (289)
T ss_dssp ---CCBGGGTBCCEEEECCCCSCTTTSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ---CCcccccccceeeeccCcccccccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc
Confidence 333 99999999875532 234578999999999874 46889999999999999999655555544
Q ss_pred hhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 317 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.......+.......+ +..++++.+||.+||..||.+|||+.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 223 DSQRKLQFYEDRHQLP----APKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp CHHHHHHHHHTTCCCC----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHhhccCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 4444444444433322 3457889999999999999999999999874
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=360.99 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=211.9
Q ss_pred ccceeecccccccCCeEEEEEEEc-------CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK-------ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~-------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
.++|++++.||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~ 99 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--------------TEKDLSDLVSEMEMMKMIGK 99 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--------------CHHHHHHHHHHHHHHHHHCC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--------------cHHHHHHHHHHHHHHHHhhc
Confidence 468999999999999999999975 467889999987541 12345678999999999966
Q ss_pred CCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCE
Q 008197 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLV 233 (574)
Q Consensus 168 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~l~~LH~~~ii 233 (574)
||||+++++++...+.+|+||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+
T Consensus 100 hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 179 (334)
T 2pvf_A 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 179 (334)
T ss_dssp CTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999998864431 3489999999999999999999999999
Q ss_pred eecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-C
Q 008197 234 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-G 308 (574)
Q Consensus 234 HrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g 308 (574)
||||||+|||++ .++.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |
T Consensus 180 H~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g 256 (334)
T 2pvf_A 180 HRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256 (334)
T ss_dssp CSCCSGGGEEEC---TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCccceEEEc---CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCC
Confidence 999999999998 478999999999987654322 234467889999998865 45889999999999999999 9
Q ss_pred CCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 309 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 309 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..||.+....+....+..+... .....+++.+.+||.+||..||.+|||+.++++
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 257 GSPYPGIPVEELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CCSSTTCCHHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcCcCCHHHHHHHHhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999988887777777665422 222467899999999999999999999999976
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=361.95 Aligned_cols=250 Identities=22% Similarity=0.289 Sum_probs=202.2
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEE----EEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.++|++.+.||+|+||.||+|++..+|+.+ |+|.+.... .......+.+|+.+++.+ +|||
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ 78 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--------------SPKANKEILDEAYVMASV-DNPH 78 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------------------CHHHHHHHHHHHHHC-CBTT
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--------------CHHHHHHHHHHHHHHHhC-CCCC
Confidence 357999999999999999999998887765 667664321 123456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.... .++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. +
T Consensus 79 iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~---~ 153 (327)
T 3poz_A 79 VCRLLGICLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---P 153 (327)
T ss_dssp BCCEEEEEESSS-EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---T
T ss_pred EeEEEEEEecCC-eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC---C
Confidence 999999998765 78899999999999988543 467999999999999999999999999999999999999984 7
Q ss_pred CCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~ 325 (574)
+.+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+.....+...+.
T Consensus 154 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 233 (327)
T 3poz_A 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233 (327)
T ss_dssp TEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred CCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHH
Confidence 8899999999987644332 234467889999998765 46889999999999999999 999998887777766665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.+... + ..+..+..+.+|+.+||..||.+|||+.+++++
T Consensus 234 ~~~~~-~--~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 234 KGERL-P--QPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp TTCCC-C--CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred cCCCC-C--CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 54322 1 224578999999999999999999999999864
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=379.76 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=215.3
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|.+.+.||+|+||.||+|.++.++..||||++.... ...+.+.+|+.+|+.+ +||||+++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~hpniv~l 281 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMKEI-KHPNLVQL 281 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----------------SCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----------------cchHHHHHHHHHHHhc-CCCCEeeE
Confidence 457999999999999999999999889999999987541 2356789999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++...+.+||||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 282 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~k 358 (495)
T 1opk_A 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVK 358 (495)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEE
T ss_pred EEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEE
Confidence 99999999999999999999999998765556799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||+++....... .....+|+.|+|||++.. .++.++|||||||++|||++ |..||.+.....+...+..+.
T Consensus 359 l~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-- 436 (495)
T 1opk_A 359 VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-- 436 (495)
T ss_dssp ECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC--
T ss_pred EeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--
Confidence 999999987643321 233456789999998864 46889999999999999999 999999888777777665543
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.......+++.+.+||.+||..||.+|||+.++++
T Consensus 437 -~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 437 -RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 22223568899999999999999999999999975
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=354.12 Aligned_cols=254 Identities=27% Similarity=0.463 Sum_probs=198.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|++.+.||+|+||.||+|.+..+|+.||||++.... .......+.+.+|+.+++.+ +||||+++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~~~E~~~l~~l-~h~~i~~~ 97 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD------------LMDAKARADCIKEIDLLKQL-NHPNVIKY 97 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTS------------SCCHHHHHHHHHHHHHHHTC-CCTTBCCE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhh------------ccCHHHHHHHHHHHHHHHhC-CCCCEeeE
Confidence 357999999999999999999999999999999987531 11223456788999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++...+.+++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||+++ .++.
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~ 174 (310)
T 2wqm_A 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGV 174 (310)
T ss_dssp EEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSC
T ss_pred EEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCC
Confidence 9999999999999999999999988753 2356799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh--hHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~ 328 (574)
+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+... ......+....
T Consensus 175 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 254 (310)
T 2wqm_A 175 VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD 254 (310)
T ss_dssp EEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC
T ss_pred EEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc
Confidence 9999999997654332 2345679999999998865 457889999999999999999999976532 23444444332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
++......+++++.+||.+||..||.+|||+.++++
T Consensus 255 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 255 --YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp --SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 233333568899999999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-44 Score=350.09 Aligned_cols=246 Identities=18% Similarity=0.208 Sum_probs=209.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|++. |..||||++.... ......+.+.+|+.+++.+ +||||++++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 73 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRD-------------WSTRKSRDFNEECPRLRIF-SHPNVLPVL 73 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTT-------------CCHHHHHHHHHHGGGGCCC-SCTTEECEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccc-------------cCHHHHHHHHHHHHHHHhc-CCCchhheE
Confidence 57999999999999999999874 8899999987642 1123456789999999999 599999999
Q ss_pred EEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCCCCC
Q 008197 176 NAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 176 ~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~ 251 (574)
+++.+. +.+++||||+++|+|.+++.......+++..+..++.||+.||.|||++| |+||||||+|||++ .++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~ 150 (271)
T 3kmu_A 74 GACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDM 150 (271)
T ss_dssp EEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---TTS
T ss_pred EEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---CCc
Confidence 999887 78999999999999999986554456999999999999999999999999 99999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCC-C---CCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-G---PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~---~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.++|+|||++..... ....||+.|+|||++.+.. + .++|||||||++|+|++|+.||.+.........+...
T Consensus 151 ~~~l~~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 226 (271)
T 3kmu_A 151 TARISMADVKFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE 226 (271)
T ss_dssp CEEEEGGGSCCTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS
T ss_pred ceeEEeccceeeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc
Confidence 899999998764332 3457899999999987643 2 3699999999999999999999988887777777665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..... ..+.+++.+.++|.+||+.||.+|||+.++++
T Consensus 227 ~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 227 GLRPT--IPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp CCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 43322 23568999999999999999999999999875
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=362.07 Aligned_cols=253 Identities=25% Similarity=0.332 Sum_probs=211.8
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCC-----EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGD-----RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|++.+.||+|+||.||+|.+..+++ .||||.+.... .....+.+.+|+.+++.+.+||
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~h~ 110 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--------------HADEKEALMSELKIMSHLGQHE 110 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--------------ChHHHHHHHHHHHHHHhhcCCC
Confidence 4689999999999999999999877664 79999986541 1234567899999999995599
Q ss_pred CcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecC
Q 008197 170 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 237 (574)
Q Consensus 170 niv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDl 237 (574)
||+++++++...+.+|+||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||
T Consensus 111 ~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl 190 (333)
T 2i1m_A 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190 (333)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred CeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCc
Confidence 99999999999999999999999999999886432 346899999999999999999999999999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCC
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPF 312 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf 312 (574)
||+|||++. ++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||
T Consensus 191 kp~NIl~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 267 (333)
T 2i1m_A 191 AARNVLLTN---GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267 (333)
T ss_dssp SGGGCEEEG---GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred ccceEEECC---CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999984 77899999999986543322 234567889999998764 56889999999999999998 99999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.........+......... ....++.+.+||.+||..||.+|||+.++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 268 PGILVNSKFYKLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp TTCCSSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccchhHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 887766666665554433222 2457899999999999999999999999976
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=359.18 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=208.4
Q ss_pred ccceeecccccccCCeEEEEEEE-----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.++|++.+.||+|+||.||+|.+ ..+++.||||++.... .......+.+|+.+++.+.+||
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~hp 91 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--------------THSEHRALMSELKILIHIGHHL 91 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHCCCT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--------------CcHHHHHHHHHHHHHHhcccCC
Confidence 46899999999999999999985 3567899999987541 1234467889999999997799
Q ss_pred CcceEEEEEEcC-CEEEEEEeccCCCchHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 170 NVVKFYNAFEDD-NYVYIAMELCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 170 niv~~~~~~~~~-~~~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
||+++++++... ..+++||||+++|+|.+++..... ..+++..+..++.||+.||.|||++||+|
T Consensus 92 ~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 171 (316)
T 2xir_A 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIH 171 (316)
T ss_dssp TBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999998765 459999999999999998854332 12899999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++. ++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |.
T Consensus 172 ~dikp~Nil~~~---~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 172 RDLAARNILLSE---KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp SCCSGGGEEECG---GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred ccCccceEEECC---CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 999999999984 68899999999986644322 234578999999998865 46889999999999999998 99
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.||.+..........+....... ....+++.+.++|.+||..||.+|||+.++++|
T Consensus 249 ~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 249 SPYPGVKIDEEFCRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CSSTTCCCSHHHHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCcccchhHHHHHHhccCccCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99987765544444333322222 124578999999999999999999999999875
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=355.54 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=200.1
Q ss_pred cccceeecccccccCCeEEEEEE----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
..++|++++.||+|+||.||+|+ +..+|+.||||++.... ....+.+.+|+.+++.+ +||
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~ 71 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EEHLRDFEREIEILKSL-QHD 71 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC---------------HHHHHHHHHHHHHHHTC-CCT
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC---------------HHHHHHHHHHHHHHHhC-CCC
Confidence 34689999999999999999998 56789999999987541 23456788999999999 599
Q ss_pred CcceEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 170 NVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 170 niv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
||+++++++.. ...+++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 72 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~- 149 (295)
T 3ugc_A 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN- 149 (295)
T ss_dssp TBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-
T ss_pred CEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC-
Confidence 99999999864 45689999999999999988543 345999999999999999999999999999999999999984
Q ss_pred CCCCCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh----
Q 008197 248 KEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---- 318 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~---- 318 (574)
++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......
T Consensus 150 --~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~ 227 (295)
T 3ugc_A 150 --ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM 227 (295)
T ss_dssp --TTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHH
T ss_pred --CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhh
Confidence 68899999999987644322 234467888999998864 5688999999999999999999998543211
Q ss_pred ------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 319 ------------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 319 ------------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+... . ..+....+++++.+||.+||..||.+|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 228 IGNDKQGQMIVFHLIELLKNN-G--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HCTTCCTHHHHHHHHHHHHTT-C--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hcCccccchhHHHHHHHHhcc-C--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 111222222 1 22223568899999999999999999999999874
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=364.33 Aligned_cols=246 Identities=23% Similarity=0.291 Sum_probs=194.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|++. ++.||||++.... ........|+.+++.+ +||||++++
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~hpniv~~~ 84 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----------------KQSWQNEYEVYSLPGM-KHENILQFI 84 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----------------HHHHHHHHHHHTSTTC-CCTTBCCEE
T ss_pred hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----------------hHHHHHHHHHHHHhcC-CCCCchhhc
Confidence 57999999999999999999864 7899999986541 1234456789999999 599999999
Q ss_pred EEEEcC----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCEeecCCCCc
Q 008197 176 NAFEDD----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH----------GLVHRDMKPEN 241 (574)
Q Consensus 176 ~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~----------~iiHrDlkp~N 241 (574)
+++... ..+|+|||||++|+|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|
T Consensus 85 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~N 161 (322)
T 3soc_A 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKN 161 (322)
T ss_dssp EEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGG
T ss_pred ceeccCCCCCceEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHh
Confidence 999874 358999999999999998843 4599999999999999999999999 99999999999
Q ss_pred EEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhcC------CCCCcchHhHHHHHHHHHhCCCCC
Q 008197 242 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK------SGPESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 242 ill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~DvwSlG~il~elltg~~Pf 312 (574)
||++ .++.+||+|||+|........ ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||
T Consensus 162 ill~---~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf 238 (322)
T 3soc_A 162 VLLK---NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAA 238 (322)
T ss_dssp EEEC---TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTS
T ss_pred EEEC---CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCC
Confidence 9998 478999999999976643322 3346899999999998753 355789999999999999999999
Q ss_pred CCCCh----------------hHHHHHHHhCCCCCCCC-CCC--CCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 313 WDKTE----------------DGIFKEVLRNKPDFRRK-PWP--SISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 313 ~~~~~----------------~~~~~~i~~~~~~~~~~-~~~--~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+... ......+.......... .|+ ..++++.+||.+||..||.+|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 239 DGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp SSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 65421 11222222222111110 011 12345899999999999999999999865
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=362.10 Aligned_cols=259 Identities=27% Similarity=0.514 Sum_probs=203.4
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc---CC
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA---GH 168 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~---~h 168 (574)
+.+.++|++.+.||+|+||.||+|.+..+|+.||||++........ ........+.+|+.++..+. +|
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---------~~~~~~~~~~~e~~~l~~l~~~~~h 97 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW---------SPLSDSVTCPLEVALLWKVGAGGGH 97 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC-----------------CCCCHHHHHHHHHHSSCCC
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc---------ccchhhHHHHHHHHHHHhhcccCCC
Confidence 4466789999999999999999999999999999999976421100 00011234567999999883 49
Q ss_pred CCcceEEEEEEcCCEEEEEEec-cCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 169 ENVVKFYNAFEDDNYVYIAMEL-CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~-~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
|||+++++++...+..++|||| +.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 98 ~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~- 174 (312)
T 2iwi_A 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL- 174 (312)
T ss_dssp SSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET-
T ss_pred CCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC-
Confidence 9999999999999999999999 7899999988543 56999999999999999999999999999999999999983
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCC--CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||++...... ......||+.|+|||++.+.. +.++|||||||++|+|++|+.||... ..+.
T Consensus 175 -~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~ 246 (312)
T 2iwi_A 175 -RRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEIL 246 (312)
T ss_dssp -TTTEEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHH
T ss_pred -CCCeEEEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HHHh
Confidence 3678999999999876543 345568999999999886543 34799999999999999999999643 2233
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.....++ ..+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus 247 ~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 247 EAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291 (312)
T ss_dssp HTCCCCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred hhccCCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence 3333222 46789999999999999999999999999999999754
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=378.88 Aligned_cols=255 Identities=26% Similarity=0.432 Sum_probs=197.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
.+|.+.+.||+|+||.||. ....+|+.||||++..... ..+.+|+.+|+.+.+|||||+++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------------------~~~~~E~~~l~~l~~HpnIv~l~ 84 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------------------SFADREVQLLRESDEHPNVIRYF 84 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------------------EECHHHHHHHHHSCCCTTBCCEE
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------------------HHHHHHHHHHHhccCCCCcCeEE
Confidence 4699999999999999764 3357899999999865311 12458999999996699999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--CCCCe
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSL 253 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--~~~~v 253 (574)
+++.+...+|||||||. |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++..+ ....+
T Consensus 85 ~~~~~~~~~~lv~E~~~-g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~ 162 (432)
T 3p23_A 85 CTEKDRQFQYIAIELCA-ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKA 162 (432)
T ss_dssp EEEEETTEEEEEEECCS-EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCE
T ss_pred EEEecCCEEEEEEECCC-CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeE
Confidence 99999999999999995 6999888543 34456667789999999999999999999999999999996422 23468
Q ss_pred EEEeeccccccCCC----CCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 254 KATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 254 kl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++|+|++ |..||........ . +
T Consensus 163 kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-~-~ 240 (432)
T 3p23_A 163 MISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-N-I 240 (432)
T ss_dssp EECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-H-H
T ss_pred EEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-H-H
Confidence 89999999876533 22345689999999999863 34678999999999999999 9999865544332 2 2
Q ss_pred HhCCCCCCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 325 LRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 325 ~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
......... ......+..+.+||.+||+.||.+|||+.++++||||...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 222222111 1112235568999999999999999999999999999763
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=372.92 Aligned_cols=244 Identities=23% Similarity=0.340 Sum_probs=207.5
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|+.+|+++ +||||+++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----------------~~~~~~~E~~~l~~l-~h~niv~~ 251 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----------------TAQAFLAEASVMTQL-RHSNLVQL 251 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----------------TSHHHHHHHHHHHTC-CCTTBCCE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----------------HHHHHHHHHHHHHhc-cCCCEEEE
Confidence 357999999999999999999864 7899999987541 235788999999999 59999999
Q ss_pred EEEEEcCC-EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 175 YNAFEDDN-YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 175 ~~~~~~~~-~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++.... .+|||||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 252 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~ 328 (450)
T 1k9a_A 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVA 328 (450)
T ss_dssp EEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTSCE
T ss_pred EEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CCCCE
Confidence 99987654 799999999999999999766555689999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
||+|||+++...... ....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+..+..
T Consensus 329 kl~DfG~a~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-- 404 (450)
T 1k9a_A 329 KVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-- 404 (450)
T ss_dssp EECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC--
T ss_pred EEeeCCCcccccccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--
Confidence 999999998654322 23467899999999865 46889999999999999998 9999998888778777766532
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
....+.+|+.+.+||.+||..||.+|||+.+++.
T Consensus 405 -~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 405 -MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 2223568899999999999999999999999864
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=363.88 Aligned_cols=249 Identities=20% Similarity=0.273 Sum_probs=203.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCE----EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~----vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
++|++.+.||+|+||.||+|.+..+++. ||+|.+..... ......+.+|+.+++.+ +||||
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i 77 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--------------RQSFQAVTDHMLAIGSL-DHAHI 77 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--------------CSCBCSCCHHHHHHHTC-CCTTB
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--------------HHHHHHHHHHHHHHhcC-CCCCc
Confidence 5799999999999999999999888876 66666543210 11223456899999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.. +..++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 78 v~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~ 152 (325)
T 3kex_A 78 VRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPS 152 (325)
T ss_dssp CCEEEEECB-SSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---SSS
T ss_pred CeEEEEEcC-CccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---CCC
Confidence 999999874 5689999999999999988543 35789999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCC---CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 252 SLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
.+||+|||+|+...... ......||+.|+|||++. +.++.++|||||||++|+|++ |+.||.+.........+..
T Consensus 153 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 232 (325)
T 3kex_A 153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK 232 (325)
T ss_dssp CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT
T ss_pred eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence 89999999998765432 234567888999999887 456889999999999999999 9999998887777777665
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
...... ...++.++.+||.+||..||.+|||+.+++++
T Consensus 233 ~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 233 GERLAQ---PQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp TCBCCC---CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred CCCCCC---CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 532221 13467889999999999999999999999875
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=367.62 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=199.8
Q ss_pred ccceeecccccccCCeEEEEEEEc---CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDK---ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..+|.+.+.||+|+||.||+|+++ .++..||||++.... .....+.+.+|+.+++++ +||||
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~ni 108 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------------TEKQRRDFLGEASIMGQF-DHPNI 108 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--------------CHHHHHHHHHHHHHHTTC-CCTTB
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--------------CHHHHHHHHHHHHHHHhC-CCCCC
Confidence 357999999999999999999876 467789999986531 123456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++...+.+|+||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 109 v~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~ 184 (373)
T 2qol_A 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN---SNL 184 (373)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTC
T ss_pred CeEEEEEeeCCceEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc---CCC
Confidence 9999999999999999999999999998853 345799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~ 325 (574)
.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|||++ |+.||.......+...+.
T Consensus 185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~ 264 (373)
T 2qol_A 185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD 264 (373)
T ss_dssp CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH
T ss_pred CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999999987643321 122346788999998864 56889999999999999998 999999988877777766
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.. .+....++..+.+||.+||..||.+||++.++++
T Consensus 265 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 265 EGYR---LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp TTEE---CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCC---CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 5432 2223467899999999999999999999999875
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-44 Score=354.87 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=203.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC-cc
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VV 172 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn-iv 172 (574)
+.++|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++.+. |++ +.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~e~~~l~~l~-~~~~i~ 68 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----------------KHPQLHIESKIYKMMQ-GGVGIP 68 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-----------------SCCHHHHHHHHHHHHT-TSTTCC
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-----------------chhHHHHHHHHHHHhh-cCCCCC
Confidence 5578999999999999999999999999999999886541 1235789999999996 655 45
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
.+..++...+..++||||+ +++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++..+.++.
T Consensus 69 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~ 146 (296)
T 3uzp_A 69 TIRWCGAEGDYNVMVMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNL 146 (296)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTC
T ss_pred ccccccCCCCceEEEEEec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCe
Confidence 5555557788999999999 8999998753 3467999999999999999999999999999999999999953335789
Q ss_pred eEEEeeccccccCCCCC--------ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCC---hhHH
Q 008197 253 LKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGI 320 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~---~~~~ 320 (574)
+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.. ....
T Consensus 147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 226 (296)
T 3uzp_A 147 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226 (296)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred EEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh
Confidence 99999999987654322 245689999999999876 45889999999999999999999997643 2233
Q ss_pred HHHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 321 FKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 321 ~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+..+.......+. ...+.+|+++.+||.+||+.||.+|||+.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 227 YERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 3333332211111 112467899999999999999999999999865
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=347.19 Aligned_cols=246 Identities=21% Similarity=0.362 Sum_probs=210.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+. +++.||||++.... ...+.+.+|+.+++.+ +||||++++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~----------------~~~~~~~~e~~~l~~l-~h~~i~~~~ 69 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA----------------MSEEDFIEEAEVMMKL-SHPKLVQLY 69 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTT----------------BCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccC----------------CCHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 57999999999999999999976 67899999987642 1235788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~---~~~~kl 145 (267)
T 3t9t_A 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE---NQVIKV 145 (267)
T ss_dssp EEECSSSSCEEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG---GGCEEE
T ss_pred EEEccCCCeEEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECC---CCCEEE
Confidence 9999999999999999999999987543 457899999999999999999999999999999999999984 788999
Q ss_pred EeeccccccCCCC--CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+..+....
T Consensus 146 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~ 225 (267)
T 3t9t_A 146 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 225 (267)
T ss_dssp CCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC
T ss_pred cccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 9999998654321 1234567889999999874 56889999999999999999 999999888888887777654322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. ....++.+.++|.+||..||.+|||+.++++
T Consensus 226 ~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 226 K---PRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp C---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C---CccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 2 2457899999999999999999999999976
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=368.95 Aligned_cols=266 Identities=18% Similarity=0.234 Sum_probs=200.3
Q ss_pred ccccceeecccccccCCeEEEEEEEcCC-----CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKAN-----GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
...++|++++.||+|+||.||+|.+..+ ++.||||++...... ...+...........+..|+..+..+ +
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~e~~~~~~~~~~~~~~e~~~~~~l-~ 106 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP----LFTELKFYQRAAKPEQIQKWIRTRKL-K 106 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH----HHHHHHHHHHHCCHHHHHHHHHHTTC-S
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh----HHHHHHHHHhhhhhHHHHHHHHHhhc-c
Confidence 3456899999999999999999998764 588999998765311 01111111112223455666677777 5
Q ss_pred CCCcceEEEEEEcC----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEE
Q 008197 168 HENVVKFYNAFEDD----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL 243 (574)
Q Consensus 168 hpniv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nil 243 (574)
||||+++++++... ...||||||| |++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 107 h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nil 184 (364)
T 3op5_A 107 YLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLL 184 (364)
T ss_dssp CCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEE
Confidence 99999999998764 5689999999 9999988754 3467999999999999999999999999999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCCC--------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCC
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWD 314 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~ 314 (574)
++.. .++.+||+|||+|+...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+
T Consensus 185 l~~~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 185 LNYK-NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EESS-CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EecC-CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9832 36899999999997654321 12345699999999998765 68899999999999999999999976
Q ss_pred CChhHHHHHHHhCC-----CCCC--CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 315 KTEDGIFKEVLRNK-----PDFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 315 ~~~~~~~~~i~~~~-----~~~~--~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.............. ..+. ......+|+++.+||..||..+|.+||++.++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 264 NLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp GTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 43332222111100 0000 0011457899999999999999999999999865
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=375.09 Aligned_cols=248 Identities=23% Similarity=0.342 Sum_probs=211.4
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|+.+|+.+ +||||++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~iv~ 247 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----------------MSVEAFLAEANVMKTL-QHDKLVK 247 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----------------BCHHHHHHHHHHHTTC-CCTTBCC
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----------------ccHHHHHHHHHHHhhC-CCCCEee
Confidence 3468999999999999999999875 46789999987541 2356789999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++. .+.+|||||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 248 l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~ 323 (454)
T 1qcf_A 248 LHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVC 323 (454)
T ss_dssp EEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTCCE
T ss_pred EEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CCCcE
Confidence 999986 56789999999999999998655445789999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCC--CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
||+|||+|+...... ......+|+.|+|||++. +.++.++|||||||++|||++ |+.||.+.+..++...+..+..
T Consensus 324 kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~ 403 (454)
T 1qcf_A 324 KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR 403 (454)
T ss_dssp EECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC
T ss_pred EEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999999998764321 122345778999999986 456889999999999999999 9999999888888887776532
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+....+|+++.+||.+||..||.+|||+.+++.
T Consensus 404 ---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 404 ---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 2223568899999999999999999999999875
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=367.43 Aligned_cols=265 Identities=20% Similarity=0.228 Sum_probs=198.4
Q ss_pred ccccceeecccccccCCeEEEEEEEcC---CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
...++|++.+.||+|+||.||+|.+.. ++..||||++....... ..+...........+.+|+.+++.+ +||
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~----~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ 108 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPL----FSELKFYQRVAKKDCIKKWIERKQL-DYL 108 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHH----HHHHHHHHHHCCHHHHHHHHHHHTC-SCC
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcch----HHHHHHHHHHhhhHHHHHHHhhccc-ccc
Confidence 345689999999999999999999987 78899999987653211 0111111112334577899999999 599
Q ss_pred CcceEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 170 NVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 170 niv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
||+++++++.. ...+|+||||+ |++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 109 ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 109 GIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG 185 (345)
T ss_dssp CCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred CcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEc
Confidence 99999999987 78999999999 99999987433 4799999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCC--------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCC
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT 316 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~ 316 (574)
.. ..+.+||+|||+|+.+.... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+..
T Consensus 186 ~~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 264 (345)
T 2v62_A 186 YK-NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL 264 (345)
T ss_dssp SS-STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT
T ss_pred cC-CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 42 22499999999997653221 12456899999999998765 5889999999999999999999996532
Q ss_pred h--hHHHHHHHhCCCCCCC---C--CCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 317 E--DGIFKEVLRNKPDFRR---K--PWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 317 ~--~~~~~~i~~~~~~~~~---~--~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. ..............+. . ....+++++.+||.+||..||.+|||+.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 265 KDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp TCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred cccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 2 2111111111111110 0 11268899999999999999999999999876
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=351.29 Aligned_cols=253 Identities=26% Similarity=0.427 Sum_probs=195.4
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+...++|++.+.||+|+||.||+|++. ..||||++.... ......+.+.+|+.+++.+ +||||
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~h~~i 82 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-------------PTPQQLQAFKNEVGVLRKT-RHVNI 82 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-------------CCHHHHHHHHHHHHHHTTC-CCTTB
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-------------CCHHHHHHHHHHHHHHHhC-CCCcE
Confidence 345578999999999999999999753 369999986542 1223456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++ ..+.+++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 83 v~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~ 157 (289)
T 3og7_A 83 LLFMGYS-TAPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDN 157 (289)
T ss_dssp CCEEEEE-CSSSCEEEEECCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTT
T ss_pred EEEEeec-cCCccEEEEEecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCC
Confidence 9999965 55668999999999999988743 346799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCC---CCCccccccCccccchHhhh----cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 252 SLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.+||+|||++..... ........||+.|+|||++. ..++.++|||||||++|+|++|+.||.+..........
T Consensus 158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 237 (289)
T 3og7_A 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237 (289)
T ss_dssp EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHH
T ss_pred CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHH
Confidence 999999999976542 22334568999999999985 23467899999999999999999999886655444443
Q ss_pred -HhCCCCCC-CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 -LRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 -~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+..... ......+|+.+.+||.+||..||.+|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 238 VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 33332222 1223568899999999999999999999999875
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=348.61 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=210.1
Q ss_pred cceeecc-cccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGK-LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~-~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|.+.+ .||+|+||.||+|.+. .++..||||++.... .....+.+.+|+.+++.+ +||||+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~i~ 73 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--------------EKADTEEMMREAQIMHQL-DNPYIV 73 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--------------CHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--------------chhHHHHHHHHHHHHHhC-CCCCEe
Confidence 4677776 9999999999999864 467889999987641 123456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++. .+.+++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++. ++.
T Consensus 74 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~---~~~ 148 (287)
T 1u59_A 74 RLIGVCQ-AEALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN---RHY 148 (287)
T ss_dssp CEEEEEE-SSSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE---TTE
T ss_pred EEEEEec-CCCcEEEEEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcC---CCC
Confidence 9999995 5568999999999999988743 3456999999999999999999999999999999999999984 789
Q ss_pred eEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |+.||...........+..
T Consensus 149 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~ 228 (287)
T 1u59_A 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228 (287)
T ss_dssp EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT
T ss_pred EEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc
Confidence 99999999987643322 223467899999999874 45889999999999999998 9999988888777777766
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
+... ...+.+++.+.+||.+||..||.+|||+.+++++.+
T Consensus 229 ~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 229 GKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCcC---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 5422 222568899999999999999999999999988654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=362.56 Aligned_cols=258 Identities=22% Similarity=0.311 Sum_probs=205.6
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
....++|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+.+++.+ +||||
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~~i 97 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES---------------SQGIEEFETEIETLSFC-RHPHL 97 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC---------------SSHHHHHHHHHHGGGSC-CCTTB
T ss_pred HHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC---------------hHHHHHHHHHHHHHHhC-CCCCE
Confidence 44667899999999999999999996 468999999876541 12456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
+++++++...+.+++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++ .
T Consensus 98 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~ 174 (321)
T 2qkw_B 98 VSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD---E 174 (321)
T ss_dssp CCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---T
T ss_pred eeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---C
Confidence 999999999999999999999999998774332 23589999999999999999999999999999999999998 4
Q ss_pred CCCeEEEeeccccccCCC---CCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHH---H
Q 008197 250 DSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF---K 322 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~---~ 322 (574)
++.+||+|||++...... .......||+.|+|||++. ..++.++|||||||++|+|++|+.||.+....... .
T Consensus 175 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~ 254 (321)
T 2qkw_B 175 NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAE 254 (321)
T ss_dssp TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHH
T ss_pred CCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHH
Confidence 789999999999764322 2234457999999999875 45689999999999999999999999765432211 1
Q ss_pred ---HHH-hCCCC------CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 323 ---EVL-RNKPD------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 323 ---~i~-~~~~~------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
... ..... ......+..+..+.+++.+||..||.+|||+.+++++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 255 WAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp HTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 11100 000111223456889999999999999999999987543
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=354.14 Aligned_cols=254 Identities=20% Similarity=0.301 Sum_probs=198.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.+.+|+++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~e~~~l~~l~~~~~i~~ 69 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----------------KHPQLHIESKIYKMMQGGVGIPT 69 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------------------CCCHHHHHHHHHHHTTSTTCCC
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-----------------cchHHHHHHHHHHHhcCCCCCCe
Confidence 5578999999999999999999999999999999865531 12347789999999964444455
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+..++...+..++||||+ +++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++..+.++.+
T Consensus 70 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~ 147 (296)
T 4hgt_A 70 IRWCGAEGDYNVMVMELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 147 (296)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCE
T ss_pred eeeecCCCCceEEEEEcc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeE
Confidence 555557888999999999 9999988753 34579999999999999999999999999999999999999432357899
Q ss_pred EEEeeccccccCCCC--------CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh---HHH
Q 008197 254 KATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIF 321 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~---~~~ 321 (574)
||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.... ..+
T Consensus 148 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 4hgt_A 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp EECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred EEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhh
Confidence 999999998765432 2235689999999999876 4578999999999999999999999764322 233
Q ss_pred HHHHhCCCCCCC-CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 322 KEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 322 ~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+.......+. ...+.+|+++.+||.+||+.||.+|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 228 ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred hhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 333222211111 112457899999999999999999999999875
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-43 Score=346.73 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=206.1
Q ss_pred ccceeecccccccCCeEEEEEEEcC---CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.++|.+.+.||+|+||.||+|++.. ++..||||.+.... .....+.+.+|+.+++.+ +||||
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~i 75 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--------------TLDNKEKFMSEAVIMKNL-DHPHI 75 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--------------CHHHHHHHHHHHHHHHHH-CCTTB
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--------------CchHHHHHHHHHHHHHhC-CCCCc
Confidence 3589999999999999999998654 34569999987541 123456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++.++ ..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. ++
T Consensus 76 ~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~ 150 (281)
T 3cc6_A 76 VKLIGIIEEE-PTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS---PE 150 (281)
T ss_dssp CCEEEEECSS-SCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE---TT
T ss_pred ceEEEEEcCC-CCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECC---CC
Confidence 9999998765 468999999999999988543 456999999999999999999999999999999999999984 67
Q ss_pred CeEEEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008197 252 SLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~ 327 (574)
.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||...........+...
T Consensus 151 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~ 230 (281)
T 3cc6_A 151 CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230 (281)
T ss_dssp EEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT
T ss_pred cEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC
Confidence 999999999987654322 234567889999998864 56889999999999999998 99999887777777766655
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.... ....+++.+.++|.+||..||.+|||+.+++++
T Consensus 231 ~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 231 DRLP---KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp CCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCC---CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 3221 224578999999999999999999999999763
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=364.94 Aligned_cols=247 Identities=16% Similarity=0.223 Sum_probs=200.2
Q ss_pred ccceeecccccccCCeEEEEEEEcCC--------CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKAN--------GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA 166 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~ 166 (574)
.++|++.+.||+|+||.||+|++..+ ++.||||++... +.+.+|+.+++.+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------------------~~~~~E~~~l~~l- 99 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------------------GRLFNEQNFFQRA- 99 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------------------STHHHHHHHHHHH-
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------------------chHHHHHHHHHHh-
Confidence 46899999999999999999999874 889999998653 2467899999999
Q ss_pred CCCCcce---------------EEEEEEc-CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 008197 167 GHENVVK---------------FYNAFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 230 (574)
Q Consensus 167 ~hpniv~---------------~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~ 230 (574)
.||||++ +++++.. .+.+|+||||+ +++|.+++.......+++..+..++.||+.||.|||++
T Consensus 100 ~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 178 (352)
T 2jii_A 100 AKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN 178 (352)
T ss_dssp CCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4999887 6777765 78999999999 99999998655457899999999999999999999999
Q ss_pred CCEeecCCCCcEEEccCCCCC--CeEEEeeccccccCCCC--------CccccccCccccchHhhhc-CCCCCcchHhHH
Q 008197 231 GLVHRDMKPENFLFKSAKEDS--SLKATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 299 (574)
Q Consensus 231 ~iiHrDlkp~Nill~~~~~~~--~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG 299 (574)
||+||||||+|||++. ++ .+||+|||++....... ......||+.|+|||++.+ .++.++||||||
T Consensus 179 ~ivH~Dikp~NIl~~~---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 255 (352)
T 2jii_A 179 EYVHGNVTAENIFVDP---EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLG 255 (352)
T ss_dssp TCBCSCCCGGGEEEET---TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred CccCCCCCHHHEEEcC---CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHH
Confidence 9999999999999984 55 89999999997654321 1234589999999999876 468899999999
Q ss_pred HHHHHHHhCCCCCCCCC--hhHHHHHH---HhCCCCCCC--CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 300 VITYILLCGRRPFWDKT--EDGIFKEV---LRNKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 300 ~il~elltg~~Pf~~~~--~~~~~~~i---~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
|++|+|++|+.||.... ...+.... ......+.. ..+..+++++.+||.+||..||.+|||+.++++
T Consensus 256 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 329 (352)
T 2jii_A 256 YCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN 329 (352)
T ss_dssp HHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence 99999999999997653 22222222 222222211 123467899999999999999999999999865
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=352.20 Aligned_cols=252 Identities=19% Similarity=0.278 Sum_probs=201.7
Q ss_pred ccceeecccccccCCeEEEEEEEcC---CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKA---NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.++|.+.+.||+|+||.||+|.+.. ++..||||++.... ......+.+.+|+.+++.+ +||||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~h~~i 98 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-------------SSQREIEEFLSEAACMKDF-SHPNV 98 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-------------CCHHHHHHHHHHHHHHHTC-CCTTB
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-------------cchhHHHHHHHHHHHHhcC-CCCCe
Confidence 4689999999999999999998765 45689999987541 1123456788999999999 59999
Q ss_pred ceEEEEEEcCC-----EEEEEEeccCCCchHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 172 VKFYNAFEDDN-----YVYIAMELCEGGELLDRILAK----KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 172 v~~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
+++++++...+ ..++||||+++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+||
T Consensus 99 v~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NI 178 (313)
T 3brb_A 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNC 178 (313)
T ss_dssp CCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGE
T ss_pred eeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceE
Confidence 99999998754 459999999999999988542 345799999999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCCh
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTE 317 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~ 317 (574)
|++ .++.+||+|||++....... ......+++.|+|||++.+. ++.++|||||||++|+|++ |..||.+...
T Consensus 179 li~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 255 (313)
T 3brb_A 179 MLR---DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN 255 (313)
T ss_dssp EEC---TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred EEc---CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH
Confidence 998 47899999999998664332 12345678899999998654 5889999999999999999 9999988888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+..+... ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus 256 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 256 HEMYDYLLHGHRL---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp GGHHHHHHTTCCC---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCCC---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 8888777765422 223568899999999999999999999999976
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=353.77 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=196.2
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHH--hcCCCC
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQA--LAGHEN 170 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~--l~~hpn 170 (574)
.+.++|++.+.||+|+||.||+|++ +|+.||||++... ....+..|.+++.. + +|||
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------------------~~~~~~~e~~~~~~~~l-~h~n 63 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------------------DEKSWFRETELYNTVML-RHEN 63 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------------------GHHHHHHHHHHHHHTCC-CCTT
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------------------cchhhHHHHHHHHHhhc-cCcC
Confidence 4567899999999999999999986 6899999998653 23455677777777 5 6999
Q ss_pred cceEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCEeecCC
Q 008197 171 VVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVHRDMK 238 (574)
Q Consensus 171 iv~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH--------~~~iiHrDlk 238 (574)
|+++++++.. ...+|+||||+++|+|.+++ ....+++..+..++.||+.||.||| ++||+|||||
T Consensus 64 iv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l---~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 140 (301)
T 3q4u_A 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140 (301)
T ss_dssp BCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHH---TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCC
T ss_pred eeeEEEeeccccCCCceeEEehhhccCCCHHHHH---hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCC
Confidence 9999998654 45689999999999999988 3357999999999999999999999 9999999999
Q ss_pred CCcEEEccCCCCCCeEEEeeccccccCCCCC-----ccccccCccccchHhhhcCC-------CCCcchHhHHHHHHHHH
Q 008197 239 PENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILL 306 (574)
Q Consensus 239 p~Nill~~~~~~~~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-------~~~~DvwSlG~il~ell 306 (574)
|+|||++ .++.+||+|||+|........ ....+||+.|+|||++.+.. +.++|||||||++|+|+
T Consensus 141 p~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~ 217 (301)
T 3q4u_A 141 SKNILVK---KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217 (301)
T ss_dssp GGGEEEC---TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhEEEc---CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHH
Confidence 9999998 478999999999976543322 23458999999999987642 35899999999999999
Q ss_pred hC----------CCCCCCCCh----hHHHHHHHhCCCCCCCCCC----CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 307 CG----------RRPFWDKTE----DGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 307 tg----------~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+| ..||..... ..............+..+. ...++.+.+||.+||..||.+|||+.++++
T Consensus 218 tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 218 RRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295 (301)
T ss_dssp TTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred hhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence 99 889865422 2233333322221111110 124467999999999999999999999975
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=348.80 Aligned_cols=248 Identities=21% Similarity=0.291 Sum_probs=206.1
Q ss_pred cceeecc-cccccCCeEEEEEEE--cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGK-LLGHGQFGYTYVATD--KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~-~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+|.+.+ .||+|+||.||+|.+ ..+++.||||++.... ......+.+.+|+.+++.+ +||||+
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~~~e~~~l~~l-~h~~i~ 81 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-------------NDPALKDELLAEANVMQQL-DNPYIV 81 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------------------CHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-------------cCHHHHHHHHHHHHHHHhC-CCCCEE
Confidence 5799988 999999999999954 5667899999987541 1123456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++ ..+.+++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++. ++.
T Consensus 82 ~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~---~~~ 155 (291)
T 1xbb_A 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHY 155 (291)
T ss_dssp CEEEEE-ESSSEEEEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTE
T ss_pred EEEEEE-CCCCcEEEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC---CCc
Confidence 999999 55678999999999999998843 467999999999999999999999999999999999999984 678
Q ss_pred eEEEeeccccccCCCCCc----cccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+||+|||++......... ....||+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+.........+..
T Consensus 156 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~ 235 (291)
T 1xbb_A 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235 (291)
T ss_dssp EEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred EEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 999999999876543321 23456789999999865 45789999999999999999 9999998888777777666
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+... ...+.+++.+.++|.+||..||.+|||+.++++
T Consensus 236 ~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 236 GERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5422 122568899999999999999999999999875
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=346.63 Aligned_cols=247 Identities=22% Similarity=0.338 Sum_probs=208.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+. ++..||||.+.... ...+.+.+|+.+++.+ +||||+++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~h~~i~~~ 73 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----------------MSPDAFLAEANLMKQL-QHQRLVRL 73 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----------------SCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc----------------ccHHHHHHHHHHHHhC-CCcCcceE
Confidence 468999999999999999999865 56789999986541 1345788999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.. +..++||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 74 ~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~k 149 (279)
T 1qpc_A 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCK 149 (279)
T ss_dssp EEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEE
T ss_pred EEEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEE
Confidence 999874 4589999999999999988544334799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCC
Q 008197 255 ATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 255 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
|+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....+....+..+...
T Consensus 150 l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 229 (279)
T 1qpc_A 150 IADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM 229 (279)
T ss_dssp ECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC
T ss_pred ECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC
Confidence 999999987654322 234567889999999874 45889999999999999999 99999988887777777665322
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+++.+.+||.+||..||.+|||+.++++
T Consensus 230 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 230 ---VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---CCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 222467899999999999999999999999875
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-43 Score=349.29 Aligned_cols=251 Identities=26% Similarity=0.337 Sum_probs=202.9
Q ss_pred ccceeecccccccCCeEEEEEE----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.++|++++.||+|+||.||+|+ +..+++.||||++.... .....+.+.+|+.+++.+ +|||
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ 84 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--------------GGNHIADLKKEIEILRNL-YHEN 84 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------------------CCHHHHHHHHHHHHTC-CCTT
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--------------cchhHHHHHHHHHHHHhC-CCCC
Confidence 4579999999999999999998 56789999999987541 122456789999999999 5999
Q ss_pred cceEEEEEEcC--CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 171 VVKFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 171 iv~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
|+++++++... ..+++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 85 i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~-- 161 (302)
T 4e5w_A 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES-- 161 (302)
T ss_dssp BCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE--
T ss_pred eeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC--
Confidence 99999999876 6799999999999999987543 356999999999999999999999999999999999999984
Q ss_pred CCCCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCC--------
Q 008197 249 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK-------- 315 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~-------- 315 (574)
++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..|+...
T Consensus 162 -~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 240 (302)
T 4e5w_A 162 -EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240 (302)
T ss_dssp -TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred -CCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhcc
Confidence 67999999999987654432 234578899999998865 4578899999999999999999986321
Q ss_pred ------ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 316 ------TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 316 ------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.........+.... .....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 241 GPTHGQMTVTRLVNTLKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp CSCCGGGHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCcccccCHHHHHHHHhccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 11112222222222 22233568899999999999999999999999875
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=356.28 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=201.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEE----EEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~v----aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.++|++++.||+|+||.||+|.+..+++.| |+|.+... ........+.+|+.+++.+ +|||
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--------------~~~~~~~~~~~E~~~l~~l-~hp~ 78 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--------------TSPKANKEILDEAYVMASV-DNPH 78 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--------------SSCCCHHHHHHHHHHHTTC-CBTT
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--------------cCHHHHHHHHHHHHHHHhC-CCCC
Confidence 357999999999999999999998888766 55554332 1123456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++.... .++|+||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. +
T Consensus 79 iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~---~ 153 (327)
T 3lzb_A 79 VCRLLGICLTST-VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---P 153 (327)
T ss_dssp BCCCCEEEESSS-EEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---T
T ss_pred eeEEEEEEecCC-ceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcC---C
Confidence 999999998766 78999999999999988543 457999999999999999999999999999999999999984 7
Q ss_pred CCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~ 325 (574)
+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+.
T Consensus 154 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~ 233 (327)
T 3lzb_A 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233 (327)
T ss_dssp TEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred CCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence 7899999999987643322 234567889999998865 46889999999999999999 999998888777776665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..... ...+.++.++.+||.+||..||.+|||+.++++
T Consensus 234 ~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 234 KGERL---PQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp TTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 54322 122467899999999999999999999999976
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=354.26 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=204.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCC----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..+|.+.+.||+|+||.||+|.+..++ ..||||++.... .......+.+|+.+++.+ +|||
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~ 107 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--------------TEKQRVDFLGEAGIMGQF-SHHN 107 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHTC-CCTT
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--------------CHHHHHHHHHHHHHHHhC-CCCC
Confidence 458999999999999999999886553 459999987531 123445788999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++...+.+++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .+
T Consensus 108 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~ 183 (333)
T 1mqb_A 108 IIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SN 183 (333)
T ss_dssp BCCEEEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TT
T ss_pred CCcEEEEEecCCCcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CC
Confidence 99999999999999999999999999988754 346799999999999999999999999999999999999998 47
Q ss_pred CCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 251 SSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
+.+||+|||++........ .....+|+.|+|||++.+ .++.++|||||||++|+|++ |+.||.+....++...+
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~ 263 (333)
T 1mqb_A 184 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263 (333)
T ss_dssp CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred CcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 8999999999987643221 123456889999999875 46889999999999999999 99999988888777777
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+.. .+....+++.+.++|.+||..||.+||++.++++
T Consensus 264 ~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 264 NDGFR---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HTTCC---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HCCCc---CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66532 1223467899999999999999999999999876
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=357.37 Aligned_cols=250 Identities=24% Similarity=0.448 Sum_probs=187.8
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
..+|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+.+++++.+||||+++
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~e~~~l~~l~~h~~iv~~ 91 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---------------EEKNRAIIQEVCFMKKLSGHPNIVQF 91 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---------------HHHHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---------------hHHHHHHHHHHHHHHHhccCCChhhc
Confidence 358999999999999999999999999999999885541 23446788999999999679999999
Q ss_pred EEEEE--------cCCEEEEEEeccCCCchHHHHHh-hcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEE
Q 008197 175 YNAFE--------DDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFL 243 (574)
Q Consensus 175 ~~~~~--------~~~~~~lv~e~~~gg~L~~~l~~-~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nil 243 (574)
++++. ....+++||||+. |+|.+++.. .....+++..+..++.||+.||.|||++| |+||||||+|||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl 170 (337)
T 3ll6_A 92 CSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170 (337)
T ss_dssp EEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred cccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence 99994 4556899999995 799888754 23467999999999999999999999999 999999999999
Q ss_pred EccCCCCCCeEEEeeccccccCCCCCc-------------cccccCccccchHhhh----cCCCCCcchHhHHHHHHHHH
Q 008197 244 FKSAKEDSSLKATDFGLSDFIKPGKKF-------------QDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILL 306 (574)
Q Consensus 244 l~~~~~~~~vkl~DFG~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~----~~~~~~~DvwSlG~il~ell 306 (574)
++ .++.+||+|||++......... ...+||+.|+|||++. ..++.++|||||||++|+|+
T Consensus 171 ~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~ 247 (337)
T 3ll6_A 171 LS---NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC 247 (337)
T ss_dssp EC---TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHH
T ss_pred EC---CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHH
Confidence 98 4779999999999876543221 1457999999999983 23577899999999999999
Q ss_pred hCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 307 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 307 tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
+|+.||......... ..... .......++.+.+||.+||..||.+|||+.+++++-+
T Consensus 248 ~g~~p~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 248 FRQHPFEDGAKLRIV----NGKYS--IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp HSSCCC----------------CC--CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hCCCCCcchhHHHhh----cCccc--CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 999999765443322 22222 2223456788999999999999999999999998754
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=357.17 Aligned_cols=250 Identities=22% Similarity=0.351 Sum_probs=202.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+.+|+.+++.+ +||||++++
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~~iv~~~ 92 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---------------QQDREEAQREADMHRLF-NHPNILRLV 92 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS---------------HHHHHHHHHHHHHHHTC-CCTTBCCCC
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC---------------HHHHHHHHHHHHHHhhc-CCCCeeeEE
Confidence 58999999999999999999999999999999886531 23456788999999999 599999999
Q ss_pred EEEE----cCCEEEEEEeccCCCchHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 176 NAFE----DDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 176 ~~~~----~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
+++. .....|+||||+++|+|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~---~ 169 (317)
T 2buj_A 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---D 169 (317)
T ss_dssp EEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---T
T ss_pred EEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---C
Confidence 9987 345899999999999999988543 346799999999999999999999999999999999999998 4
Q ss_pred CCCeEEEeeccccccCCCC----------CccccccCccccchHhhhcC----CCCCcchHhHHHHHHHHHhCCCCCCCC
Q 008197 250 DSSLKATDFGLSDFIKPGK----------KFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDK 315 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~----------~~~~~~gt~~y~aPE~~~~~----~~~~~DvwSlG~il~elltg~~Pf~~~ 315 (574)
++.+||+|||++....... ......||+.|+|||++.+. ++.++|||||||++|+|++|+.||...
T Consensus 170 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 249 (317)
T 2buj_A 170 EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249 (317)
T ss_dssp TSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHH
T ss_pred CCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhh
Confidence 7899999999987543211 01234689999999998653 478999999999999999999999532
Q ss_pred --ChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 316 --TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 316 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
........ ..... ..+..+.+++.+.+||.+||..||.+|||+.+++++
T Consensus 250 ~~~~~~~~~~-~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 250 FQKGDSVALA-VQNQL--SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHTTSCHHHH-HHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcccchhhHH-hhccC--CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 11112222 22222 222335688999999999999999999999999885
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=391.08 Aligned_cols=264 Identities=24% Similarity=0.387 Sum_probs=210.0
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+..+|+.||||++.... .....+.+.+|+.+++.+ +||||+++
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--------------~~~~~~~~~~Ei~iL~~L-~HpnIV~l 77 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--------------SPKNRERWCLEIQIMKKL-NHPNVVSA 77 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--------------CHHHHHHHHHHHHHHHHC-CBTTBCCE
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--------------CHHHHHHHHHHHHHHHhC-CCCCCCce
Confidence 368999999999999999999999999999999986531 223456789999999999 59999999
Q ss_pred EEEEEc------CCEEEEEEeccCCCchHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 175 YNAFED------DNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 175 ~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
++++.. .+..|+|||||+||+|.+++.... ...+++..++.++.||+.||.|||+.||+||||||+|||++..
T Consensus 78 ~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~ 157 (676)
T 3qa8_A 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157 (676)
T ss_dssp EECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECC
T ss_pred eeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecC
Confidence 998765 778899999999999999885432 2368999999999999999999999999999999999999964
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH---
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE--- 323 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~--- 323 (574)
+....+||+|||++............+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+......+..
T Consensus 158 g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~ 237 (676)
T 3qa8_A 158 PQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVR 237 (676)
T ss_dssp SSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC
T ss_pred CCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhh
Confidence 4445699999999998776666667799999999998864 568899999999999999999999976533221100
Q ss_pred ------H-----HhCCCCCCC------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 324 ------V-----LRNKPDFRR------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 324 ------i-----~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+ ..+...+.. ...+.+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus 238 ~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred cccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 0 011111111 1112356789999999999999999999999999999874
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=370.68 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=209.5
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|+.+ +||||++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~hp~iv~ 243 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----------------MSPEAFLQEAQVMKKL-RHEKLVQ 243 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS----------------SCHHHHHHHHHHHHHC-CCTTBCC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC----------------CCHHHHHHHHHHHHhC-CCCCEee
Confidence 34689999999999999999999864 4679999987541 1245789999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.. +.+||||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 244 ~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~ 319 (452)
T 1fmk_A 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVC 319 (452)
T ss_dssp EEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCE
T ss_pred EEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCE
Confidence 9999876 6689999999999999998654456799999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCC--CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
||+|||+++...... ......+|+.|+|||++. +.++.++|||||||++|||++ |+.||.+....++...+..+..
T Consensus 320 kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~ 399 (452)
T 1fmk_A 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399 (452)
T ss_dssp EECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred EECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999999998764322 123446788999999876 456889999999999999999 9999999888888877766532
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc--Ccccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~--hp~~~~~ 373 (574)
.+..+.+|+.+.+||.+||..||.+|||+.++++ ..++...
T Consensus 400 ---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 2222568899999999999999999999999986 4555543
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-43 Score=353.99 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=204.6
Q ss_pred cceeecccccccCCeEEEEEE----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
++|++.+.||+|+||.||+|+ +..+++.||||++.... ....+.+.+|+.+++.+ +||||
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~~i 86 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---------------PDQQRDFQREIQILKAL-HSDFI 86 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---------------HHHHHHHHHHHHHHHTC-CCTTB
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---------------HHHHHHHHHHHHHHHhc-CCCce
Confidence 579999999999999999998 56789999999987542 23446789999999999 59999
Q ss_pred ceEEEEEE--cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCC
Q 008197 172 VKFYNAFE--DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 249 (574)
Q Consensus 172 v~~~~~~~--~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~ 249 (574)
+++++++. ....+|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 87 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~--- 162 (327)
T 3lxl_A 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES--- 162 (327)
T ss_dssp CCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---
T ss_pred eEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC---
Confidence 99999886 5677999999999999999885432 46999999999999999999999999999999999999984
Q ss_pred CCCeEEEeeccccccCCCCC----ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChh------
Q 008197 250 DSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED------ 318 (574)
Q Consensus 250 ~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~------ 318 (574)
++.+||+|||++........ .....||+.|+|||++.+. ++.++|||||||++|+|++|+.||......
T Consensus 163 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~ 242 (327)
T 3lxl_A 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 242 (327)
T ss_dssp TTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC
T ss_pred CCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc
Confidence 78899999999987654332 2345788999999988654 588999999999999999999998543321
Q ss_pred --------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 319 --------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 319 --------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+.... .....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 243 CERDVPALSRLLELLEEGQ--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp ----CCHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccccccHHHHHHHhhccc--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11122222222 12223568899999999999999999999999965
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=346.78 Aligned_cols=243 Identities=22% Similarity=0.337 Sum_probs=199.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+ +|+.||||++... ...+.+.+|+.+++.+ +||||++++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----------------~~~~~~~~E~~~l~~l-~h~~iv~~~ 80 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----------------ATAQAFLAEASVMTQL-RHSNLVQLL 80 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-----------------C--HHHHHTHHHHTTC-CCTTBCCEE
T ss_pred hhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch-----------------hHHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 5799999999999999999976 4889999998654 1345788999999999 599999999
Q ss_pred EEEEc-CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++.. .+.+|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++ .++.+|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~ 157 (278)
T 1byg_A 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAK 157 (278)
T ss_dssp EEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEE
T ss_pred EEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEE
Confidence 98755 45799999999999999988655444589999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||++....... ....+|+.|+|||++.+ .++.++||||||+++|+|++ |+.||...........+..+. .
T Consensus 158 l~Dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~---~ 232 (278)
T 1byg_A 158 VSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---K 232 (278)
T ss_dssp ECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC---C
T ss_pred Eeeccccccccccc--cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC---C
Confidence 99999997654322 33468899999999865 46889999999999999998 999998887777776665542 2
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+++.+.++|.+||..||.+|||+.++++
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 2233568899999999999999999999999875
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=346.54 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=202.3
Q ss_pred ccceeecccccccCCeEEEEEEEcC-CCC--EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKA-NGD--RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~--~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
.++|++.+.||+|+||.||+|.+.. ++. .||||++..... ......+.+.+|+.+++.+ +||||
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~h~~i 83 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL------------SQPEAMDDFIREVNAMHSL-DHRNL 83 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------------------CHHHHHHHHHHHHHHHC-CCTTB
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc------------CCHHHHHHHHHHHHHHHhC-CCCCc
Confidence 3589999999999999999998643 333 689999875411 1123456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++++++..+. .++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. ++
T Consensus 84 ~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~---~~ 158 (291)
T 1u46_A 84 IRLYGVVLTPP-MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RD 158 (291)
T ss_dssp CCEEEEECSSS-CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TT
T ss_pred ccEEEEEccCC-ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC---CC
Confidence 99999998766 88999999999999988654 356899999999999999999999999999999999999984 67
Q ss_pred CeEEEeeccccccCCCCC----ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~ 325 (574)
.+||+|||++........ .....+|+.|+|||++.+. ++.++||||||+++|+|++ |+.||.+.........+.
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~ 238 (291)
T 1u46_A 159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 238 (291)
T ss_dssp EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHH
Confidence 899999999987654332 2345688899999998654 5788999999999999999 999999988888888877
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+ ....+++.+.++|.+||..||.+|||+.++++
T Consensus 239 ~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 239 KEGERLP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp TSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCCCC--CCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 6654333 23568899999999999999999999999986
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=345.48 Aligned_cols=249 Identities=22% Similarity=0.266 Sum_probs=203.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCC---CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+|++.+.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+.+++++ +||||+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv 89 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--------------DIGEVSQFLTEGIIMKDF-SHPNVL 89 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--------------SHHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--------------CHHHHHHHHHHHHHHHhC-CCCCEe
Confidence 47999999999999999999875433 468999886531 123456788999999999 599999
Q ss_pred eEEEEE-EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 173 KFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 173 ~~~~~~-~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++++ ..++..++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 90 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~---~~~ 165 (298)
T 3f66_A 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKF 165 (298)
T ss_dssp CCCEEECCSSSCCEEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTC
T ss_pred eeeeEEEcCCCceEEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---CCC
Confidence 999986 456788999999999999998843 346689999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCC-----CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+.........+
T Consensus 166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~ 245 (298)
T 3f66_A 166 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245 (298)
T ss_dssp CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH
T ss_pred CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH
Confidence 99999999998654322 2234578899999998865 46889999999999999999 67777777777777777
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+...... ..+++.+.++|.+||..||.+|||+.++++
T Consensus 246 ~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 246 LQGRRLLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcCCCCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 665543322 457899999999999999999999999876
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-43 Score=369.73 Aligned_cols=255 Identities=18% Similarity=0.282 Sum_probs=207.1
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++++.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.|.+|++|+
T Consensus 4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----------------~~~~~~~E~~il~~L~~~~~i~ 66 (483)
T 3sv0_A 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-----------------KHPQLLYESKIYRILQGGTGIP 66 (483)
T ss_dssp EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-----------------SSCCHHHHHHHHHHTTTSTTCC
T ss_pred CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----------------ccHHHHHHHHHHHHhcCCCCCC
Confidence 35678999999999999999999999999999999876531 1234778999999997667888
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
.+..++...+..+|||||+ +++|.+++.. ....+++..++.++.||+.||.|||++|||||||||+||||+..+..+.
T Consensus 67 ~i~~~~~~~~~~~lvme~~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~ 144 (483)
T 3sv0_A 67 NVRWFGVEGDYNVLVMDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQ 144 (483)
T ss_dssp CEEEEEEETTEEEEEEECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTC
T ss_pred eEEEEEeeCCEEEEEEECC-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCe
Confidence 8888888899999999999 9999998753 3467999999999999999999999999999999999999953335789
Q ss_pred eEEEeeccccccCCCCC--------ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCCh---hHH
Q 008197 253 LKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGI 320 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~---~~~ 320 (574)
+||+|||+++....... ....+||+.|+|||++.+ .++.++||||||||||+|++|+.||.+... ...
T Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~ 224 (483)
T 3sv0_A 145 VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK 224 (483)
T ss_dssp EEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH
T ss_pred EEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH
Confidence 99999999987654322 225689999999999876 458899999999999999999999977543 233
Q ss_pred HHHHHhCCCCCC-CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 321 FKEVLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 321 ~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+..+........ ......+++++.+||.+||..+|.+||++.+|++
T Consensus 225 ~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 225 YEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 333332211111 1111457899999999999999999999998765
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=350.12 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=202.6
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|..++.||+|+||.||+|.+ +++.||||++..... .......+.+.+|+.+++.+ +||||++++++
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~ 98 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVD-----------ITTEELKQQFDQEIKVMAKC-QHENLVELLGF 98 (307)
T ss_dssp TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTT-----------SCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEE
T ss_pred cccCCccccCCCeEEEEEEE--CCceEEEEEEecccC-----------cchHHHHHHHHHHHHHHHhc-CCCCeEEEEEE
Confidence 55668999999999999974 688999999865311 11123456789999999999 59999999999
Q ss_pred EEcCCEEEEEEeccCCCchHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEE
Q 008197 178 FEDDNYVYIAMELCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 256 (574)
Q Consensus 178 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~ 256 (574)
+.+.+..++||||+++++|.+++... ...++++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~ 175 (307)
T 2nru_A 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD---EAFTAKIS 175 (307)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEEC
T ss_pred EecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc---CCCcEEEe
Confidence 99999999999999999999988543 245699999999999999999999999999999999999998 47899999
Q ss_pred eeccccccCCCCC---ccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhH----HHHHHHhCCC
Q 008197 257 DFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG----IFKEVLRNKP 329 (574)
Q Consensus 257 DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~----~~~~i~~~~~ 329 (574)
|||++........ .....||+.|+|||++.+.++.++|||||||++|+|++|..||....... +...+.....
T Consensus 176 Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 255 (307)
T 2nru_A 176 DFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK 255 (307)
T ss_dssp CCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC
T ss_pred ecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh
Confidence 9999986543221 23457999999999998888999999999999999999999997654432 2222222111
Q ss_pred CC-------CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DF-------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~-------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+ .....+..++.+.+++.+||..||.+|||+.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 256 TIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp CHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00 00111223467889999999999999999999975
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-42 Score=342.79 Aligned_cols=248 Identities=22% Similarity=0.268 Sum_probs=203.2
Q ss_pred ceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
.|.+.+.||+|+||.||+|.+..++. .||+|.+.... .....+.+.+|+.+++.+ +||||++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~h~~iv~ 86 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--------------EMQQVEAFLREGLLMRGL-NHPNVLA 86 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--------------SHHHHHHHHHHHHHHHTC-CCTTBCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--------------cHHHHHHHHHHHHHHHhC-CCCCeee
Confidence 58888999999999999999765554 79999986531 123456788999999999 5999999
Q ss_pred EEEEEEcCCEE-EEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 174 FYNAFEDDNYV-YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 174 ~~~~~~~~~~~-~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++.+.+.. ++||||+.+|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 87 ~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~~~~ 162 (298)
T 3pls_A 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFT 162 (298)
T ss_dssp CCEEECCSSSCCEEEECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCC
T ss_pred EEEEEecCCCCcEEEEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCc
Confidence 99999876554 999999999999998844 346789999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCC-----CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCC-CCCCCCChhHHHHHHH
Q 008197 253 LKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVL 325 (574)
Q Consensus 253 vkl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~-~Pf~~~~~~~~~~~i~ 325 (574)
+||+|||++...... .......||+.|+|||++.+ .++.++|||||||++|+|++|. +||...........+.
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~ 242 (298)
T 3pls_A 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA 242 (298)
T ss_dssp EEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH
T ss_pred EEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh
Confidence 999999999765332 22345678999999999876 4588999999999999999955 4555555555555555
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..... . ....+++.+.+||.+||..||.+|||+.++++
T Consensus 243 ~~~~~-~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 243 QGRRL-P--QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp TTCCC-C--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCC-C--CCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 54322 1 22457899999999999999999999999875
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=355.57 Aligned_cols=260 Identities=19% Similarity=0.248 Sum_probs=203.8
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
....++|++.+.||+|+||.||+|.+ .+|+.||||++..... ......+.+|+.+++.+ +||||
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------------~~~~~~~~~e~~~l~~l-~h~~i 89 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERT--------------QGGELQFQTEVEMISMA-VHRNL 89 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------------------CCCHHHHHHHGGGTC-CCTTB
T ss_pred HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccC--------------chHHHHHHHHHHHHHhc-cCCCc
Confidence 34567899999999999999999974 4689999999876421 11122578999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCEeecCCCCcEEEcc
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKS 246 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~ 246 (574)
+++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++ ||+||||||+|||++
T Consensus 90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~- 168 (326)
T 3uim_A 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD- 168 (326)
T ss_dssp CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC-
T ss_pred cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC-
Confidence 999999999999999999999999999885543 23599999999999999999999999 999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCC--CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCC----CChhH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD----KTEDG 319 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~----~~~~~ 319 (574)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||.. .....
T Consensus 169 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 246 (326)
T 3uim_A 169 --EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246 (326)
T ss_dssp --TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCS
T ss_pred --CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccch
Confidence 47899999999998764322 2345579999999998854 468899999999999999999999942 11111
Q ss_pred HHHHHHhCCCCC---C--------CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 320 IFKEVLRNKPDF---R--------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 320 ~~~~i~~~~~~~---~--------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
............ . ....+..++.+.+++.+||+.||.+|||+.++++|-+-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp BHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 112222211100 0 00011223578999999999999999999999987653
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=350.82 Aligned_cols=251 Identities=26% Similarity=0.346 Sum_probs=201.6
Q ss_pred ccccce-eecccccccCCeEEEEEEE----cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC
Q 008197 93 DFDRRY-TIGKLLGHGQFGYTYVATD----KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG 167 (574)
Q Consensus 93 ~~~~~y-~~~~~lG~G~~g~Vy~~~~----~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~ 167 (574)
.+.++| ++++.||+|+||.||++.. ..+|+.||||++.... .....+.+.+|+.+++.+.
T Consensus 27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~- 91 (318)
T 3lxp_A 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--------------GPQHRSGWKQEIDILRTLY- 91 (318)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHCC-
T ss_pred eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--------------ChHHHHHHHHHHHHHHhCC-
Confidence 345566 9999999999999988753 4578999999987541 1234567899999999995
Q ss_pred CCCcceEEEEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEc
Q 008197 168 HENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245 (574)
Q Consensus 168 hpniv~~~~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 245 (574)
||||+++++++.+ ...+++||||+++|+|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 92 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~ 168 (318)
T 3lxp_A 92 HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD 168 (318)
T ss_dssp CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred CcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc
Confidence 9999999999987 4789999999999999998733 3599999999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh--
Q 008197 246 SAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-- 318 (574)
Q Consensus 246 ~~~~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-- 318 (574)
.++.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||......
T Consensus 169 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~ 245 (318)
T 3lxp_A 169 ---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 245 (318)
T ss_dssp ---TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred ---CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh
Confidence 478999999999987654432 234578899999999875 4578899999999999999999999653221
Q ss_pred ------------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 319 ------------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 319 ------------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
......+..... ......+++++.+||.+||..||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 246 ELIGIAQGQMTVLRLTELLERGER--LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhcccccchhHHHHHHHHhcccC--CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 011222222222 2223568899999999999999999999999974
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-43 Score=359.35 Aligned_cols=247 Identities=21% Similarity=0.259 Sum_probs=196.5
Q ss_pred ccceeecccccccCCeEEEEE-----EEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--C
Q 008197 95 DRRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--G 167 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~-----~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~ 167 (574)
.++|.+.+.||+|+||.||+| .+..+++.||||++... ....+..|+.+++.+. .
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------------------~~~~~~~e~~~~~~l~~~~ 125 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------------------NPWEFYIGTQLMERLKPSM 125 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------------------CHHHHHHHHHHHHHSCGGG
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------------------ChhHHHHHHHHHHHhhhhh
Confidence 468999999999999999999 46778999999998754 2345778888888874 2
Q ss_pred CCCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 168 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 168 hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
||||+.+++++...+..|||||||+||+|.+++... ....+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 126 ~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll 205 (365)
T 3e7e_A 126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFIL 205 (365)
T ss_dssp GGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE
T ss_pred hhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEe
Confidence 899999999999999999999999999999988543 34679999999999999999999999999999999999999
Q ss_pred cc--------CCCCCCeEEEeeccccccC---CCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCC
Q 008197 245 KS--------AKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 245 ~~--------~~~~~~vkl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf 312 (574)
+. ...++.+||+|||+|+... ........+||+.|+|||++.+. ++.++|||||||++|+|++|+.||
T Consensus 206 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 206 GNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp CGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred cccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 84 1226899999999996543 33344567899999999998765 589999999999999999999999
Q ss_pred CCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 313 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 313 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
......... ....+.. ...++.+.+++..||..+|.+|++..+.+.+
T Consensus 286 ~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 286 VKNEGGECK-----PEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp EEEETTEEE-----ECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred ccCCCCcee-----echhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 654321100 0111111 1246789999999999999999765554443
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=358.53 Aligned_cols=249 Identities=22% Similarity=0.255 Sum_probs=197.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCC---CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
..|.+.+.||+|+||.||+|.+..++ ..||||.+.... .....+.+.+|+.+++.+ +||||+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~il~~l-~hpnIv 153 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--------------DIGEVSQFLTEGIIMKDF-SHPNVL 153 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--------------CSHHHHHHHHHHTTSTTC-CCTTBC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--------------CHHHHHHHHHHHHHHHhC-CCCCcc
Confidence 35889999999999999999875433 468999886431 123456789999999999 599999
Q ss_pred eEEEEEE-cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 173 KFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 173 ~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++++. .++..|+||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ .++
T Consensus 154 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~ 229 (373)
T 3c1x_A 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKF 229 (373)
T ss_dssp CCCEEECCCSSCCEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTC
T ss_pred eEEEEEEcCCCCeEEEEECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC---CCC
Confidence 9999875 45688999999999999998743 345689999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCC-----CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
.+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++ |.+||.+....+....+
T Consensus 230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~ 309 (373)
T 3c1x_A 230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309 (373)
T ss_dssp CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH
T ss_pred CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH
Confidence 99999999998654322 1234567889999998865 56889999999999999999 78888777776777766
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
..+..... .+.+++.+.++|.+||..||.+|||+.++++
T Consensus 310 ~~~~~~~~---p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 310 LQGRRLLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCCCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66543222 2457899999999999999999999999976
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=344.25 Aligned_cols=241 Identities=28% Similarity=0.427 Sum_probs=192.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||.||+|.+ +++.||||++... ...+.+.+|+.+++++ +||||++++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----------------~~~~~~~~E~~~l~~l-~hp~iv~~~ 67 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----------------SERKAFIVELRQLSRV-NHPNIVKLY 67 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----------------THHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----------------hHHHHHHHHHHHHhcC-CCCCcCeEE
Confidence 4799999999999999999986 4789999998643 2346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCEeecCCCCcEEEccCCCCC
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~ 251 (574)
+++.+ ..|+||||++||+|.+++..... ..+++..+..++.||+.||.|||+ +||+||||||+|||++. ++
T Consensus 68 ~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~ 142 (307)
T 2eva_A 68 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA---GG 142 (307)
T ss_dssp EBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET---TT
T ss_pred EEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC---CC
Confidence 98874 37999999999999998854322 247899999999999999999999 89999999999999984 44
Q ss_pred C-eEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChh--HHHHHHHhC
Q 008197 252 S-LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRN 327 (574)
Q Consensus 252 ~-vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~--~~~~~i~~~ 327 (574)
. +||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||...... .....+..+
T Consensus 143 ~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 220 (307)
T 2eva_A 143 TVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG 220 (307)
T ss_dssp TEEEECCCCC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT
T ss_pred CEEEEcccccccccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC
Confidence 4 899999999765432 234579999999999876 4688999999999999999999999754332 233333333
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
. .....+.+++.+.+||.+||..||.+|||+.++++
T Consensus 221 ~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 221 T---RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp C---CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred C---CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2 22233568899999999999999999999999976
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=372.71 Aligned_cols=254 Identities=24% Similarity=0.352 Sum_probs=213.3
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
..++|++.+.||+|+||.||+|.+.. +..||||++.... ...+.+.+|+.+|+.| +||||++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~----------------~~~~~~~~E~~~l~~l-~hpniv~ 326 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT----------------MSPEAFLQEAQVMKKL-RHEKLVQ 326 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS----------------SCHHHHHHHHHHHHHC-CCTTBCC
T ss_pred chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC----------------CCHHHHHHHHHHHHhC-CCCCEee
Confidence 34689999999999999999999864 4679999987541 1245789999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.. +.+||||||+++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 327 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~ 402 (535)
T 2h8h_A 327 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVC 402 (535)
T ss_dssp EEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCE
T ss_pred EEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcE
Confidence 9999876 6789999999999999998654456799999999999999999999999999999999999998 47899
Q ss_pred EEEeeccccccCCCC--CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCC
Q 008197 254 KATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
||+|||+++...... ......+|..|+|||++. +.++.++|||||||++|||++ |+.||.+....++...+..+..
T Consensus 403 kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~ 482 (535)
T 2h8h_A 403 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 482 (535)
T ss_dssp EECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred EEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999999998764321 122346788999999876 456889999999999999999 9999998888888877766532
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc--Cccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVRE 372 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~--hp~~~~ 372 (574)
....+.+++.+.+||.+||..||.+|||+.+++. ..+|..
T Consensus 483 ---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 483 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred ---CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 2223568899999999999999999999999986 355544
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=349.13 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=194.1
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHh-cCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHE 169 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~~hp 169 (574)
...+.++|++.+.||+|+||.||+|++. |+.||||++... .......|.+++..+ .+||
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~------------------~~~~~~~e~~~~~~~~~~h~ 91 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT------------------EEASWFRETEIYQTVLMRHE 91 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG------------------GHHHHHHHHHHHTSTTCCCT
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc------------------ccchhhhHHHHHHHHhhcCC
Confidence 3456679999999999999999999864 899999998643 123345566665544 2699
Q ss_pred CcceEEEEEEcC----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCEeecC
Q 008197 170 NVVKFYNAFEDD----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDM 237 (574)
Q Consensus 170 niv~~~~~~~~~----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~iiHrDl 237 (574)
||+++++++... ..+|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||++ ||+||||
T Consensus 92 ~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Di 168 (337)
T 3mdy_A 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDL 168 (337)
T ss_dssp TBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCC
T ss_pred CeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEeccc
Confidence 999999999877 789999999999999998843 4699999999999999999999999 9999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCCC-----ccccccCccccchHhhhcCC-CCC------cchHhHHHHHHHH
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-GPE------SDVWSIGVITYIL 305 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~-~~~------~DvwSlG~il~el 305 (574)
||+|||++ .++.+||+|||+|........ ....+||+.|+|||++.+.. ... +|||||||++|||
T Consensus 169 kp~Nill~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 245 (337)
T 3mdy_A 169 KSKNILVK---KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245 (337)
T ss_dssp CGGGEEEC---TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHH
T ss_pred chHHEEEC---CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHH
Confidence 99999998 478999999999976543322 13458999999999987654 333 8999999999999
Q ss_pred HhC----------CCCCCCCCh----hHHHHHHHhCCCCCCCCC----CCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 306 LCG----------RRPFWDKTE----DGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 306 ltg----------~~Pf~~~~~----~~~~~~i~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
++| ..||..... ..............+..+ ...+++++.+||.+||..||.+|||+.+++++
T Consensus 246 ~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 246 ARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 999 777754321 122333322211111110 01345678999999999999999999999764
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-42 Score=374.95 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=201.3
Q ss_pred ccccccCCeEEEEEEE--cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 102 KLLGHGQFGYTYVATD--KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
+.||+|+||.||+|.+ +.+++.||||+++... ......+.+.+|+.+|+.| +|||||++++++.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-------------~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 440 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-------------NDPALKDELLAEANVMQQL-DNPYIVRMIGICE 440 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-------------GCGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-------------CCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence 4799999999999955 4567899999987542 1123457899999999999 5999999999997
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeec
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG 259 (574)
.+ .++||||||++|+|.+++. ....+++..+..++.||+.||.|||++|||||||||+|||++. ++.+||+|||
T Consensus 441 ~~-~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~---~~~~kL~DFG 514 (635)
T 4fl3_A 441 AE-SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFG 514 (635)
T ss_dssp SS-SEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCTT
T ss_pred cC-CEEEEEEccCCCCHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC---CCCEEEEEcC
Confidence 54 5889999999999999884 4467999999999999999999999999999999999999984 7799999999
Q ss_pred cccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 260 LSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 260 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|+....... .....||+.|+|||++.+ .++.++|||||||++|||++ |+.||.+....++...+..+...
T Consensus 515 la~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~--- 591 (635)
T 4fl3_A 515 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM--- 591 (635)
T ss_dssp HHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---
T ss_pred CccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---
Confidence 9987654322 233467889999999875 56889999999999999998 99999999888888877766432
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+++++.+||.+||..||.+|||+.++++
T Consensus 592 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 592 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 122468899999999999999999999999864
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=372.72 Aligned_cols=248 Identities=21% Similarity=0.293 Sum_probs=203.8
Q ss_pred cceeecc-cccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGK-LLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~-~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+++.+.+ .||+|+||.||+|.++ .++..||||+++... .....+.+.+|+.+|+.+ +|||||
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~~E~~il~~l-~hpniv 399 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--------------EKADTEEMMREAQIMHQL-DNPYIV 399 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--------------SSTTHHHHHHHHHHHTTC-CCTTBC
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--------------ChHHHHHHHHHHHHHHhC-CCCCEe
Confidence 3455655 8999999999999875 356679999987541 123457789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.. +.+|||||||++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++. ++.
T Consensus 400 ~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~---~~~ 474 (613)
T 2ozo_A 400 RLIGVCQA-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN---RHY 474 (613)
T ss_dssp CEEEEEES-SSEEEEEECCTTCBHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTE
T ss_pred eEEEEecc-CCeEEEEEeCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcC---CCc
Confidence 99999987 459999999999999998743 3457999999999999999999999999999999999999984 789
Q ss_pred eEEEeeccccccCCCCC----ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+||+|||+|+....... .....+|+.|+|||++. +.++.++|||||||++|||++ |+.||.+....++...+..
T Consensus 475 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~ 554 (613)
T 2ozo_A 475 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554 (613)
T ss_dssp EEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT
T ss_pred EEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc
Confidence 99999999987643322 12335678999999886 457889999999999999998 9999999888888888776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+... ...+.+++++.+||.+||..||.+|||+.++++
T Consensus 555 ~~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 555 GKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred CCCC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 6422 222468899999999999999999999999853
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-42 Score=347.84 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=200.8
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHh-cCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQAL-AGHE 169 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~~hp 169 (574)
...+.++|.+.+.||+|+||.||+|.+ +|+.||||++... ....+.+|++++..+ .+||
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------------------~~~~~~~e~~~~~~~~l~h~ 96 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------------------EERSWFREAEIYQTVMLRHE 96 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------------------GHHHHHHHHHHHHHSCCCCT
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------------------hHHHHHHHHHHHHHhhcCCC
Confidence 345667899999999999999999986 5899999998653 234577899998883 2699
Q ss_pred CcceEEEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCEeecC
Q 008197 170 NVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVHRDM 237 (574)
Q Consensus 170 niv~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH--------~~~iiHrDl 237 (574)
||+++++++.... .+|+||||+++|+|.+++.. ..+++..++.++.||+.||.||| +.||+||||
T Consensus 97 ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dl 173 (342)
T 1b6c_B 97 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDL 173 (342)
T ss_dssp TBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCC
T ss_pred cEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCC
Confidence 9999999998875 89999999999999998843 46899999999999999999999 899999999
Q ss_pred CCCcEEEccCCCCCCeEEEeeccccccCCCC-----CccccccCccccchHhhhcCC-------CCCcchHhHHHHHHHH
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYIL 305 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~~~DvwSlG~il~el 305 (574)
||+|||++ .++.+||+|||++....... .....+||+.|+|||++.+.. +.++|||||||++|+|
T Consensus 174 kp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el 250 (342)
T 1b6c_B 174 KSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250 (342)
T ss_dssp SGGGEEEC---TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHEEEC---CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHH
Confidence 99999998 47899999999997765433 224568999999999987653 2579999999999999
Q ss_pred HhC----------CCCCCCCCh-----hHHHHHHHhCCCCCCCC-CC--CCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 306 LCG----------RRPFWDKTE-----DGIFKEVLRNKPDFRRK-PW--PSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 306 ltg----------~~Pf~~~~~-----~~~~~~i~~~~~~~~~~-~~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
++| ..||..... ......+.........+ .+ ...++.+.+||.+||..||.+|||+.++++|
T Consensus 251 ~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 251 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp HTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 999 789866422 23333333322211111 01 1233578899999999999999999999764
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=359.48 Aligned_cols=255 Identities=16% Similarity=0.213 Sum_probs=197.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--------C
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--------G 167 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--------~ 167 (574)
++|++++.||+|+||.||+|++ +|+.||||++....... .........+.+.+|+.+++.|. .
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~-------~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~ 90 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDL-------VNGSHQKTFEEILPEIIISKELSLLSGEVCNR 90 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSC-------BTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSB
T ss_pred ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccc-------cccccchhHHHHHHHHHHHHHHHHhhcccccc
Confidence 5799999999999999999987 78999999997652100 00011234467889999999985 4
Q ss_pred CCCcceEEEEEE------------------------------cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHH
Q 008197 168 HENVVKFYNAFE------------------------------DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217 (574)
Q Consensus 168 hpniv~~~~~~~------------------------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~ 217 (574)
||||+++.+++. ..+.+|||||||++|++++.+.. ..+++..++.++
T Consensus 91 h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~ 167 (336)
T 2vuw_A 91 TEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSIL 167 (336)
T ss_dssp CCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHH
T ss_pred CCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHH
Confidence 888888877653 26889999999999988776632 568999999999
Q ss_pred HHHHHHHHHHH-HCCCEeecCCCCcEEEccCC-----------------CCCCeEEEeeccccccCCCCCccccccCccc
Q 008197 218 RQMLRVAAECH-LHGLVHRDMKPENFLFKSAK-----------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 279 (574)
Q Consensus 218 ~qi~~~l~~LH-~~~iiHrDlkp~Nill~~~~-----------------~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y 279 (574)
.||+.||.||| ++||+||||||+|||++..+ ....+||+|||+|+..... ..+||+.|
T Consensus 168 ~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y 243 (336)
T 2vuw_A 168 HQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCT
T ss_pred HHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecc
Confidence 99999999999 99999999999999999522 1128999999999876532 45899999
Q ss_pred cchHhhhcCCCCCcchHhHHHH-HHHHHhCCCCCCCCCh-hHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHHHccccC
Q 008197 280 VAPEVLKRKSGPESDVWSIGVI-TYILLCGRRPFWDKTE-DGIFKEVLRNKPD---FRRKPWPSISNSAKDFVKKLLVKD 354 (574)
Q Consensus 280 ~aPE~~~~~~~~~~DvwSlG~i-l~elltg~~Pf~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~~~~~~li~~~L~~d 354 (574)
+|||++.+..+.++||||||++ .+++++|..||.+... ......+...... .....++.+|+++.+||.+||+.|
T Consensus 244 ~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 244 MDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp TCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred cChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 9999998877889999998777 7788999999843211 1122333322111 111112357788999999999976
Q ss_pred CCCCCCHHHHh-cCcccc
Q 008197 355 PRARLTAAQAL-SHPWVR 371 (574)
Q Consensus 355 p~~Rps~~~~l-~hp~~~ 371 (574)
|+.++| +||||+
T Consensus 324 -----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 324 -----SATDLLCQHSLFK 336 (336)
T ss_dssp -----SHHHHHHHCGGGC
T ss_pred -----CHHHHHhcCCCcC
Confidence 999999 999995
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=346.49 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=202.8
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||.||+|.+.. .||||++..... .....+.+.+|+.+++.+ +||||+++
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-------------~~~~~~~~~~e~~~l~~l-~h~~iv~~ 94 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-------------NEDQLKAFKREVMAYRQT-RHENVVLF 94 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-------------CCCCCCCCCTTGGGGTTC-CCTTBCCC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-------------CHHHHHHHHHHHHHHhcC-CCCCEeEE
Confidence 4689999999999999999998753 599999875421 011223466899999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+.+.+++||||++|++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++ ++.+|
T Consensus 95 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~ 169 (319)
T 2y4i_B 95 MGACMSPPHLAIITSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVV 169 (319)
T ss_dssp CEEEECSSCEEEECBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCE
T ss_pred EEEEecCCceEEEeecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEE
Confidence 9999999999999999999999988743 234799999999999999999999999999999999999997 56899
Q ss_pred EEeeccccccCC------CCCccccccCccccchHhhhc----------CCCCCcchHhHHHHHHHHHhCCCCCCCCChh
Q 008197 255 ATDFGLSDFIKP------GKKFQDIVGSAYYVAPEVLKR----------KSGPESDVWSIGVITYILLCGRRPFWDKTED 318 (574)
Q Consensus 255 l~DFG~a~~~~~------~~~~~~~~gt~~y~aPE~~~~----------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~ 318 (574)
|+|||++..... ........||+.|+|||++.+ .++.++|||||||++|+|++|+.||......
T Consensus 170 l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 249 (319)
T 2y4i_B 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249 (319)
T ss_dssp ECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH
T ss_pred EeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999875431 122334579999999999864 2467899999999999999999999988887
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.....+..+..... ....++.++.+||.+||..||.+|||+.++++
T Consensus 250 ~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 250 AIIWQMGTGMKPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHTTCCCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred HHHHHhccCCCCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 77777766543221 22357889999999999999999999999976
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=363.68 Aligned_cols=250 Identities=20% Similarity=0.207 Sum_probs=192.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC-CCc---
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH-ENV--- 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h-pni--- 171 (574)
..|.+.+.||+|+||.||+|++..+|+.||||++..... ......+.+.+|+.+++.+. | +|.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~------------~~~~~~~~~~~E~~~~~~l~-~~~~~~~~ 144 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER------------PPSNAIKQMKEEVLRLRLLR-GIKNQKQA 144 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----------------CCHHHHHHHHGGGGST-TCCSHHHH
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC------------ccHHHHHHHHHHHHHHHhhc-cCCCHHHH
Confidence 458899999999999999999999999999999874311 11123466889999998885 4 321
Q ss_pred ------------------ceEEEEEEc-----CCEEEEEEeccCCCchHHHHH-----hhcCCCCCHHHHHHHHHHHHHH
Q 008197 172 ------------------VKFYNAFED-----DNYVYIAMELCEGGELLDRIL-----AKKDSRYTEKDAAVVVRQMLRV 223 (574)
Q Consensus 172 ------------------v~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~-----~~~~~~l~~~~~~~i~~qi~~~ 223 (574)
..++.++.. ...++++|+++ +++|.+++. ......+++..+..++.||+.|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~a 223 (413)
T 3dzo_A 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRL 223 (413)
T ss_dssp HHHTCBCCCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccccchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHH
Confidence 111122221 23467888876 689988773 2224457888999999999999
Q ss_pred HHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhh----------c-CCCCC
Q 008197 224 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----------R-KSGPE 292 (574)
Q Consensus 224 l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~----------~-~~~~~ 292 (574)
|.|||++|||||||||+|||++ .++.+||+|||+++..... ....+| +.|+|||++. . .++.+
T Consensus 224 L~~LH~~~iiHrDiKp~NILl~---~~~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~ 297 (413)
T 3dzo_A 224 LASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFA 297 (413)
T ss_dssp HHHHHHTTEECSCCCGGGEEEC---TTCCEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHH
T ss_pred HHHHHhCCcccCCcccceEEEe---cCCeEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCch
Confidence 9999999999999999999998 4778999999998765432 455688 9999999883 1 24678
Q ss_pred cchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 293 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 293 ~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
+|||||||++|+|++|+.||...........+.. .++.+|+.+.+||.+||..||.+|||+.++++||||+.
T Consensus 298 ~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 298 FDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred hhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 9999999999999999999987655443333322 23468899999999999999999999999999999986
Q ss_pred c
Q 008197 373 G 373 (574)
Q Consensus 373 ~ 373 (574)
.
T Consensus 370 ~ 370 (413)
T 3dzo_A 370 L 370 (413)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=348.52 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=188.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHH--HHHhcCCCCcce
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI--LQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~i--l~~l~~hpniv~ 173 (574)
++|++++.||+|+||.||+|++ +++.||||++.... ...+..|..+ +..+ +||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------------------~~~~~~e~~~~~~~~~-~h~~i~~ 71 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------------------RQNFINEKNIYRVPLM-EHDNIAR 71 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------------------HHHHHHHHHHHTSTTC-CCTTBCC
T ss_pred HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------------------hhhHHHHHHHHHHHhc-cCcchhh
Confidence 5799999999999999999975 68999999986531 2233444444 3346 6999999
Q ss_pred EEEEEEc-----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCEeecCCC
Q 008197 174 FYNAFED-----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKP 239 (574)
Q Consensus 174 ~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---------~iiHrDlkp 239 (574)
+++.+.. ...+|+|||||++|+|.+++.. ...++..+..++.||+.||.|||+. ||+||||||
T Consensus 72 ~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp 148 (336)
T 3g2f_A 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148 (336)
T ss_dssp EEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSG
T ss_pred heecccccccCCCceEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeeccccc
Confidence 9986542 3478999999999999998843 3458999999999999999999999 999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCC---------CCccccccCccccchHhhhc--------CCCCCcchHhHHHHH
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPG---------KKFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVIT 302 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~--------~~~~~~DvwSlG~il 302 (574)
+|||++ .++.+||+|||+|...... ......+||+.|+|||++.+ .++.++|||||||++
T Consensus 149 ~Nill~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il 225 (336)
T 3g2f_A 149 RNVLVK---NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225 (336)
T ss_dssp GGEEEC---TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred ceEEEc---CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHH
Confidence 999998 4789999999999865432 11234579999999999875 235679999999999
Q ss_pred HHHHhCCCCCCCCCh-----------------hHHHHHHHhCCCCC--CCCCCC---CCCHHHHHHHHHccccCCCCCCC
Q 008197 303 YILLCGRRPFWDKTE-----------------DGIFKEVLRNKPDF--RRKPWP---SISNSAKDFVKKLLVKDPRARLT 360 (574)
Q Consensus 303 ~elltg~~Pf~~~~~-----------------~~~~~~i~~~~~~~--~~~~~~---~~~~~~~~li~~~L~~dp~~Rps 360 (574)
|||++|..||..... .............. ....|+ ..++.+.+||.+||..||.+|||
T Consensus 226 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 305 (336)
T 3g2f_A 226 WEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLT 305 (336)
T ss_dssp HHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcc
Confidence 999999877643221 11111222111111 111111 13457999999999999999999
Q ss_pred HHHHh------cCcccccc
Q 008197 361 AAQAL------SHPWVREG 373 (574)
Q Consensus 361 ~~~~l------~hp~~~~~ 373 (574)
+.+++ .++|-++.
T Consensus 306 ~~e~l~~L~~ll~~~~~~~ 324 (336)
T 3g2f_A 306 AQXAEERMAELMMIWERNK 324 (336)
T ss_dssp HHHHHHHHHHHHHCCCC--
T ss_pred hHHHHHHHHHHHHHHHhcc
Confidence 99994 46776654
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=343.81 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=201.9
Q ss_pred ccceeecccccccCCeEEEEEE----EcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 95 DRRYTIGKLLGHGQFGYTYVAT----DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~----~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.++|++++.||+|+||.||+|+ +..+|+.||||++.... ....+.+.+|+.+++.+ +|||
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~E~~~l~~l-~h~~ 103 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---------------EEHLRDFEREIEILKSL-QHDN 103 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC---------------SHHHHHHHHHHHHHHTC-CCTT
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC---------------HHHHHHHHHHHHHHHhC-CCCC
Confidence 4579999999999999999998 46689999999986531 23456789999999999 5999
Q ss_pred cceEEEEEEcCC--EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 171 VVKFYNAFEDDN--YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 171 iv~~~~~~~~~~--~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
|+++++++...+ .+++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 104 iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~-- 180 (326)
T 2w1i_A 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN-- 180 (326)
T ss_dssp BCCEEEEECC----CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE--
T ss_pred eeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC--
Confidence 999999987643 789999999999999988543 356999999999999999999999999999999999999984
Q ss_pred CCCCeEEEeeccccccCCCCC----ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCCh------
Q 008197 249 EDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE------ 317 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~------ 317 (574)
++.+||+|||++........ .....+|+.|+|||++.+. ++.++|||||||++|+|++|..||.....
T Consensus 181 -~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~ 259 (326)
T 2w1i_A 181 -ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259 (326)
T ss_dssp -TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHH
T ss_pred -CCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhh
Confidence 77899999999987654332 2234678889999988654 57899999999999999999999853211
Q ss_pred ------hH---HHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 318 ------DG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 318 ------~~---~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.. .....+...... +..+.+++++.+||.+||..||.+|||+.++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 260 GNDKQGQMIVFHLIELLKNNGRL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccchhhhHHHHHHHhhcCCCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 111222222221 223568899999999999999999999999874
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-41 Score=368.05 Aligned_cols=250 Identities=23% Similarity=0.333 Sum_probs=207.1
Q ss_pred cccceeecccccccCCeEEEEEEEcCC---CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKAN---GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~---~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
..++|++.+.||+|+||.||+|.+..+ +..||||.+.... .....+.+.+|+.+++.+ +|||
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~Hpn 452 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--------------SDSVREKFLQEALTMRQF-DHPH 452 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--------------CHHHHHHHHHHHHHHHHC-CCTT
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--------------CHHHHHHHHHHHHHHHhC-CCCC
Confidence 346899999999999999999998654 4579999886531 123456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
|+++++++. ++.+|+||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++. +
T Consensus 453 Iv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~---~ 527 (656)
T 2j0j_A 453 IVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---N 527 (656)
T ss_dssp BCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---T
T ss_pred CCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeC---C
Confidence 999999985 45689999999999999988543 356899999999999999999999999999999999999984 7
Q ss_pred CCeEEEeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 251 SSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|||++ |..||.+....+....+..
T Consensus 528 ~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~ 607 (656)
T 2j0j_A 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607 (656)
T ss_dssp TEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH
T ss_pred CCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc
Confidence 8999999999987654332 223467889999998864 56889999999999999997 9999999888888887776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+... +..+.+++.+.+||.+||..||.+|||+.++++
T Consensus 608 ~~~~---~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 608 GERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCC---CCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 5432 123568899999999999999999999999864
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-42 Score=379.39 Aligned_cols=245 Identities=24% Similarity=0.365 Sum_probs=202.3
Q ss_pred ccccccceeecccccccCCeEEEEEEEcC-CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKA-NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
.+.+.++|++.+.||+|+||.||+|.+.. +|+.||||++.... .......+.+|+.+++.+ +||
T Consensus 75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~hp 139 (681)
T 2pzi_A 75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--------------DAEAQAMAMAERQFLAEV-VHP 139 (681)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--------------CHHHHHHHHHHHGGGGGC-CCT
T ss_pred CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--------------CHHHHHHHHHHHHHHHhc-CCC
Confidence 34566899999999999999999999976 78999999886431 123456788999999999 599
Q ss_pred CcceEEEEEEcCCE-----EEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEE
Q 008197 170 NVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244 (574)
Q Consensus 170 niv~~~~~~~~~~~-----~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill 244 (574)
||+++++++...+. .||||||++|++|.+.+. ..+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus 140 ~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll 215 (681)
T 2pzi_A 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML 215 (681)
T ss_dssp TBCCEEEEEEEECTTSCEEEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEE
Confidence 99999999987554 799999999999988652 279999999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 245 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 245 ~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
+. +.+||+|||++...... ...+||+.|+|||++.+.++.++|||||||++|+|++|.+||.+.....+
T Consensus 216 ~~----~~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~---- 284 (681)
T 2pzi_A 216 TE----EQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL---- 284 (681)
T ss_dssp CS----SCEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----
T ss_pred eC----CcEEEEecccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc----
Confidence 83 48999999999876543 45689999999999988888899999999999999999999865321100
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
+ ........++.+.+||.+||..||.+||++.+++.|+|+.
T Consensus 285 ----~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 ----P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ----C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ----c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 0011112457899999999999999999999999998875
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=332.54 Aligned_cols=228 Identities=16% Similarity=0.139 Sum_probs=186.0
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|++..+|+.||||++..... ......+.+.+|+.++..+ +||||+
T Consensus 28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~------------~~~~~~~~~~~e~~~l~~l-~hp~iv 94 (286)
T 3uqc_A 28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV------------LPDDVLQETLSRTLRLSRI-DKPGVA 94 (286)
T ss_dssp ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC------------SCHHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc------------cCHHHHHHHHHHHHHHhcC-CCCCcc
Confidence 456789999999999999999999999999999999976421 1123457789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+.+..|+||||++|++|.+++. . + .....+..++.||+.||.|||++||+||||||+|||++ .++.
T Consensus 95 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~--~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~ 167 (286)
T 3uqc_A 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVAD--T-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGD 167 (286)
T ss_dssp CEEEEEEETTEEEEEEECCCEEEHHHHHT--T-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSC
T ss_pred eeeEEEEECCcEEEEEEecCCCCHHHHHh--c-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCC
Confidence 99999999999999999999999999872 2 2 46677899999999999999999999999999999998 4788
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH---HHHhCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK---EVLRNKP 329 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~---~i~~~~~ 329 (574)
+||+++| |++| ++.++|||||||++|+|++|+.||.+.+....+. .......
T Consensus 168 ~kl~~~~-------------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 222 (286)
T 3uqc_A 168 VVLAYPA-------------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222 (286)
T ss_dssp EEECSCC-------------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCB
T ss_pred EEEEecc-------------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCC
Confidence 9987544 3333 5788999999999999999999998765432111 1111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.......+.+++++.+||.+||..||.+| |+.++++
T Consensus 223 ~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 223 IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 11111235689999999999999999999 9999976
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-36 Score=322.15 Aligned_cols=239 Identities=14% Similarity=0.066 Sum_probs=161.5
Q ss_pred cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEEcCC
Q 008197 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDN 182 (574)
Q Consensus 103 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~~~~ 182 (574)
.++.|++|.+..++....|+.||||++.+...... ......+...+.+.+|+++|+++.+||||+++++++++++
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~-----~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGI-----LTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTC-----SCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS
T ss_pred ccccCCcccccccccccccceeEEEEEeccccccc-----chhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC
Confidence 46788888888888888999999999976521100 0011123456789999999999988999999999999999
Q ss_pred EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeecccc
Q 008197 183 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262 (574)
Q Consensus 183 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~ 262 (574)
.+|||||||+|++|.+.|. ..+++++. .|+.||+.||.|||++|||||||||+|||++ .++.|||+|||+|+
T Consensus 316 ~~yLVMEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~vKL~DFGlAr 387 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQHARLIDFGSIV 387 (569)
T ss_dssp EEEEEEECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSCEEECCCTTEE
T ss_pred EEEEEEecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCCEEEeecccCe
Confidence 9999999999999999984 45677764 4789999999999999999999999999998 47899999999998
Q ss_pred ccCCC-CCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCH
Q 008197 263 FIKPG-KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 341 (574)
Q Consensus 263 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 341 (574)
..... ....+.+||+.|||||++.+.+..++|+||+|+++++|.++..|+ ...+. ..+ .. ..
T Consensus 388 ~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~-~~~---~~-----~~ 450 (569)
T 4azs_A 388 TTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNW--------LYAVW-QEP---VE-----RW 450 (569)
T ss_dssp SCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHHH--------HHHHH-TSC---GG-----GC
T ss_pred eCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhccccchh--------HHHhh-cCC---CC-----CC
Confidence 76543 344567999999999999998888999999999999887765443 11111 111 11 11
Q ss_pred HHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 342 ~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
.+..+...++..+|..||.......++|..
T Consensus 451 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 480 (569)
T 4azs_A 451 NFVLLLALFEKKAKLPSAEQQRGATEQWII 480 (569)
T ss_dssp SHHHHHHHHHTGGGSCCGGGSSCCHHHHHH
T ss_pred cHHHHHHHHhCCCCCCCCChhhhccchhHH
Confidence 245667777778888887766666666643
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=264.41 Aligned_cols=189 Identities=18% Similarity=0.169 Sum_probs=144.3
Q ss_pred eecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEE
Q 008197 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAF 178 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~ 178 (574)
...+.||+|+||.||+|. ..+..+|+|+......... ........+.+.+|+.+|+++ +||||+++..++
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~-------~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~ 408 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDE-------RLDENIRKSRTAREARYLALV-KDFGIPAPYIFD 408 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCH-------HHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccch-------hhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEE
Confidence 446689999999999994 5678999998755321100 001112356789999999999 599999655555
Q ss_pred EcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEee
Q 008197 179 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DF 258 (574)
...+..|||||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++ . .+||+||
T Consensus 409 ~~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~----~-~~kL~DF 473 (540)
T 3en9_A 409 VDLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD----K-DLYIIDF 473 (540)
T ss_dssp EETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES----S-SEEECCC
T ss_pred EeCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC----C-eEEEEEC
Confidence 566777999999999999998732 668999999999999999999999999999998 3 9999999
Q ss_pred ccccccCCCCC--------ccccccCccccchHhhhc---CCCCCcchHhHHHHHHHHHhCCCCC
Q 008197 259 GLSDFIKPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 259 G~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~---~~~~~~DvwSlG~il~elltg~~Pf 312 (574)
|+|+....... ....+||+.|+|||++.. .|+..+|+||..+-..+.+.++.+|
T Consensus 474 Gla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 474 GLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp TTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 99988754322 135789999999999874 4577789999999999888888776
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-26 Score=216.12 Aligned_cols=180 Identities=31% Similarity=0.498 Sum_probs=141.4
Q ss_pred cCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhh
Q 008197 366 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 445 (574)
Q Consensus 366 ~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 445 (574)
.|||.+.. .....+++...+.+|++|...+++++..+..++..++++++.+|+++|..+|.|++|.|+.+||..++..
T Consensus 8 ~~~~~~~~-~~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~- 85 (197)
T 3pm8_A 8 SSGRENLY-FQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKK- 85 (197)
T ss_dssp ----------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-
T ss_pred cchHhhhc-cCCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-
Confidence 48998854 3566778888999999999999999999999999999999999999999999999999999999999955
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 524 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 524 (574)
+|..++..++..+|+.+|.|++|.|+|+||+..+........ ...++.+|+.||.|++|+|+.+||+.++...
T Consensus 86 ~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~ 159 (197)
T 3pm8_A 86 IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLK------KEVCLIPFKFFDIDGNGKISVEELKRIFGRDD 159 (197)
T ss_dssp HC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCS------HHHHHHHHHHHCTTCSSEECHHHHHHHHC---
T ss_pred hCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhh------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence 788889999999999999999999999999987654332221 2468889999999999999999999999877
Q ss_pred -C------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 525 -G------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 525 -~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+ +++.+|..+|.|+||.|+|+||+.+|++
T Consensus 160 ~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 195 (197)
T 3pm8_A 160 IENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195 (197)
T ss_dssp -CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence 3 3889999999999999999999999975
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-26 Score=211.80 Aligned_cols=177 Identities=27% Similarity=0.430 Sum_probs=147.1
Q ss_pred cCccccccCCCCCCCccHHHHHHHHhhhhhhhhhHHHHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhh
Q 008197 366 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 445 (574)
Q Consensus 366 ~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~ 445 (574)
.|||+-... ....+++..++.+|++|...+++++..+..+...++++++.+++++|..+|.|++|.|+.+||..++. .
T Consensus 3 ~~~~~~~~~-~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~-~ 80 (191)
T 3k21_A 3 HHHHHSSGR-ENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLE-K 80 (191)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-H
T ss_pred CCccccCCc-cccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH-H
Confidence 477776543 33456677889999999999999999999999999999999999999999999999999999999995 4
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
+|..++ .++..+|+.+|.|++|.|+|+||+..+..... .. ...+..+|+.+|+|++|+|+.+||+.++...+
T Consensus 81 ~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~----~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~ 152 (191)
T 3k21_A 81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ----LS---KKLIYCAFRVFDVDNDGEITTAELAHILYNGN 152 (191)
T ss_dssp TTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG----CC---HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSS
T ss_pred cCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh----cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcC
Confidence 888888 89999999999999999999999987754321 11 23677899999999999999999999986532
Q ss_pred -----------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 526 -----------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 526 -----------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
++..+|..+|.|+||.|+|+||+.+|+
T Consensus 153 ~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 153 KKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp SCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 378899999999999999999999985
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=218.88 Aligned_cols=171 Identities=23% Similarity=0.236 Sum_probs=124.1
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhh-hhh--hhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS-FQD--LKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
.|.+++.||+|+||.||+|.+ .+|+.||||+++......+... ..+ ...+.......+.+|+.+|+.+. |++++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~ 168 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK 168 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe
Confidence 456679999999999999998 8899999999975421110000 000 00011124567899999999996 455555
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+ +.. +..|+||||++||+|.+ + ....+..++.||+.||.|||++||+||||||+|||++ ++.+
T Consensus 169 ~---~~~-~~~~lvmE~~~g~~L~~-l--------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~v 231 (282)
T 1zar_A 169 V---YAW-EGNAVLMELIDAKELYR-V--------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGI 231 (282)
T ss_dssp E---EEE-ETTEEEEECCCCEEGGG-C--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEE
T ss_pred E---Eec-cceEEEEEecCCCcHHH-c--------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcE
Confidence 4 433 45699999999999987 3 1123557999999999999999999999999999998 5789
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc-----------CCCCCcchHhH
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----------KSGPESDVWSI 298 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~DvwSl 298 (574)
||+|||+|.. +..|+|||++.. .++..+|+|.+
T Consensus 232 kl~DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 232 WIIDFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp EECCCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred EEEECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 9999999853 446899998753 34566677654
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-25 Score=200.30 Aligned_cols=141 Identities=30% Similarity=0.505 Sum_probs=125.0
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
+..++++++++|+++|..||+|++|+|+.+||..+| +.+|..+++.++..++..+|.|++|.|+|.||+..+.......
T Consensus 2 a~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l-~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~ 80 (176)
T 2lhi_A 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN 80 (176)
T ss_dssp CCCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHH-HHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence 357899999999999999999999999999999999 4589999999999999999999999999999998765432211
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.....++.+|+.||+|++|+|+.+||+.++...+ +++++|+.+| |+||.|+|+||+.+|.+.
T Consensus 81 -----~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~ 148 (176)
T 2lhi_A 81 -----DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKG 148 (176)
T ss_dssp -----HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred -----CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence 1234688899999999999999999999998877 4899999999 999999999999999753
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=193.01 Aligned_cols=139 Identities=30% Similarity=0.527 Sum_probs=123.7
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++++++++|+++|..||+|++|.|+..||..++. .+|..++..++..++..+|.+++|.|+|.||+..+.......
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-- 79 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMR-TLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRET-- 79 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHH-HHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTT--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHH-hcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhccc--
Confidence 47899999999999999999999999999999994 589999999999999999999999999999998775432211
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. ...++.+|+.||+|++|+|+.+||+.++...| +++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 80 ~~---~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 80 DT---EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp TT---HHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred Cc---HHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 11 23678899999999999999999999998777 4899999999999999999999999964
|
| >3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-24 Score=193.01 Aligned_cols=141 Identities=19% Similarity=0.322 Sum_probs=120.9
Q ss_pred ccchHHhhhhccccccccC--CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 409 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~--d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
.++++++++++++|..||. |++|+|+..||..+| +.+|..+++.++..++. .|.+++|.|+|+||+.++.......
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~l-r~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~ 79 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLL-RCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKD 79 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHH-HHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhccc
Confidence 5788999999999999995 899999999999999 56999999999998765 4788999999999998876543322
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCC--CCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADI--DKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~--d~dG~i~~~EF~~~~~~~ 554 (574)
.... ...++.||+.||+|++|+|+.+||+.++..+| +++.+++.+|. |+||.|+|+||+++|...
T Consensus 80 ~~~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~ 152 (159)
T 3i5g_C 80 TGTA---ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152 (159)
T ss_dssp TTCC---HHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred ccch---HHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence 2222 23688899999999999999999999998887 48999999995 889999999999999744
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=185.56 Aligned_cols=136 Identities=26% Similarity=0.489 Sum_probs=119.5
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
+++++.+++++|..||.|++|+|+.+||..+| +.+|..++..++..+++.+|.|++|.|+|+||+.++......
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~----- 74 (143)
T 2obh_A 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE----- 74 (143)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHH-HHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhcc-----
Confidence 35678899999999999999999999999999 459999999999999999999999999999999876542211
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
......++.+|+.||+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.+|.
T Consensus 75 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 75 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred ccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 11234688899999999999999999999998776 389999999999999999999999885
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-24 Score=210.99 Aligned_cols=140 Identities=29% Similarity=0.570 Sum_probs=123.0
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++++|+++|..||.|++|+|+.+||..+| +.+|..+++++++.+|+.+|.|++|.|+|+||+.++.......
T Consensus 294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aL-rsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~- 371 (440)
T 3u0k_A 294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDT- 371 (440)
T ss_dssp BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH-HHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC-
Confidence 47899999999999999999999999999999999 5599999999999999999999999999999998775432211
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. ...++.+|+.||+|++|+|+.+||+.++..+| +++++|+.+|.|+||.|+|+||+++|..
T Consensus 372 -d~---eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 372 -DS---EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp ------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred -Ch---HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 11 23678899999999999999999999998776 4899999999999999999999999853
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-23 Score=188.77 Aligned_cols=163 Identities=29% Similarity=0.462 Sum_probs=140.3
Q ss_pred cHHHHHHHHhhhhhhhhhHHHHhhhccccc--hHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHH
Q 008197 382 DISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 459 (574)
Q Consensus 382 ~~~~l~~l~~~~~~s~l~~~~l~~~~~~~~--~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~ 459 (574)
+..++.+|+.|...+++++..+..+...++ ++++.+++++|..+|.|++|.|+.+||..++. .+|.. ..++..+|
T Consensus 3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~-~~g~~--~~~~~~~~ 79 (180)
T 3mse_B 3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLA-SVGIK--KWDINRIL 79 (180)
T ss_dssp CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HTTCC--HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHH-HcCCC--HHHHHHHH
Confidence 457789999999999999999999888887 89999999999999999999999999999995 47764 57899999
Q ss_pred HhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhC
Q 008197 460 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEAD 535 (574)
Q Consensus 460 ~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D 535 (574)
..+|.|++|.|+|+||+..+....... ...+..+|+.+|+|++|+|+.+||+.++...+ +++.+|..+|
T Consensus 80 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d 152 (180)
T 3mse_B 80 QALDINDRGNITYTEFMAGCYRWKNIE-------STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVH 152 (180)
T ss_dssp HHHCTTCCSEECHHHHHHHHSCCTTC---------CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHhcccCC-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhh
Confidence 999999999999999998776432211 13577899999999999999999999998432 4899999999
Q ss_pred CCCC--------CcccHHHHHHHHHhc
Q 008197 536 IDKD--------GRISLSEFRRLLRTA 554 (574)
Q Consensus 536 ~d~d--------G~i~~~EF~~~~~~~ 554 (574)
.|+| |.|+|+||+.+|...
T Consensus 153 ~~~d~~~~~~~~G~i~~~eF~~~l~~~ 179 (180)
T 3mse_B 153 SIKKGIPREHIINKISFQEFKDYMLST 179 (180)
T ss_dssp TC---------CCCBCHHHHHHHHHTT
T ss_pred hccCcccccccCCeeeHHHHHHHHHhc
Confidence 9999 999999999999753
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-23 Score=193.10 Aligned_cols=169 Identities=30% Similarity=0.449 Sum_probs=145.3
Q ss_pred CccHHHHHHHHhhhhhhhhhHHHHhhhcccc-chHHhhhhccccccccCCCCCCcCHHHHHHHHHhh----------CCC
Q 008197 380 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----------LPW 448 (574)
Q Consensus 380 ~~~~~~l~~l~~~~~~s~l~~~~l~~~~~~~-~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~----------~~~ 448 (574)
++....+.+|++|...+++++..+..+...+ +++++.+++++|..+|.|++|.|+.+||..++... .+.
T Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 82 (191)
T 3khe_A 3 HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDS 82 (191)
T ss_dssp CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccc
Confidence 4456788999999999999999999888877 88999999999999999999999999999999652 156
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC---
Q 008197 449 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 525 (574)
Q Consensus 449 ~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 525 (574)
.++..++..+|+.+|.|++|.|+|+||+..+........ ...+..+|+.+|.|++|+|+.+||+.++....
T Consensus 83 ~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~ 156 (191)
T 3khe_A 83 SQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS------RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDD 156 (191)
T ss_dssp HHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCC------HHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCH
T ss_pred hhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccch------HHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCH
Confidence 677889999999999999999999999987754322111 23678899999999999999999999998221
Q ss_pred -cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 526 -SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 526 -~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
++..+|..+|.|+||.|+|+||+.+|...
T Consensus 157 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 186 (191)
T 3khe_A 157 ETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186 (191)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999999999999753
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-23 Score=185.52 Aligned_cols=158 Identities=41% Similarity=0.705 Sum_probs=131.8
Q ss_pred hhhhhhhhhHHHHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcce
Q 008197 391 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470 (574)
Q Consensus 391 ~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I 470 (574)
.|...+.+++..+..+...++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..+|..+|.|++|.|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i 80 (166)
T 2aao_A 2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLK-RVGANLKESEILDLMQAADVDNSGTI 80 (166)
T ss_dssp ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGG-GGTCCCCHHHHHHHHHHHCTTCCSSB
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeE
Confidence 56667788888888888889999999999999999999999999999999994 48999999999999999999999999
Q ss_pred ehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHH
Q 008197 471 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE 546 (574)
Q Consensus 471 ~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~E 546 (574)
+|+||+..+....... ....+..+|+.+|.|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+|
T Consensus 81 ~~~ef~~~~~~~~~~~------~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~e 154 (166)
T 2aao_A 81 DYKEFIAATLHLNKIE------REDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNE 154 (166)
T ss_dssp CHHHHHHHHTTCHHHH------TTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHH
T ss_pred cHHHHHHHHHHHhhcc------cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 9999998775432211 123678899999999999999999999998765 477899999999999999999
Q ss_pred HHHHHHhcc
Q 008197 547 FRRLLRTAS 555 (574)
Q Consensus 547 F~~~~~~~~ 555 (574)
|+.+|.+.+
T Consensus 155 F~~~~~~~~ 163 (166)
T 2aao_A 155 FVAMMQKGS 163 (166)
T ss_dssp HHHHHC---
T ss_pred HHHHHHhcc
Confidence 999998654
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=179.54 Aligned_cols=139 Identities=29% Similarity=0.535 Sum_probs=122.2
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++++++.+++++|..||.|++|.|+.+||..++. .+|..++..++..+|..+|.|++|.|+|+||+.++......
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~--- 78 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE--- 78 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH---
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccC---
Confidence 46788899999999999999999999999999995 48999999999999999999999999999999877543211
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
......+..+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|..
T Consensus 79 --~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 79 --QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp --HHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred --CCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 11234678899999999999999999999998776 4899999999999999999999999863
|
| >3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B | Back alignment and structure |
|---|
Probab=99.88 E-value=9.7e-23 Score=181.68 Aligned_cols=136 Identities=21% Similarity=0.370 Sum_probs=117.8
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++++|+++|..||+|++|.|+..||..+| +.+|..+++.++..++. +++|.|+|.||+..+.......
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l-~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~- 81 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMF-SSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGT- 81 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHH-HHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTC-
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHH-HHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhccc-
Confidence 46899999999999999999999999999999999 55999999998888775 4678899999998765433221
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.. ...++.+|+.||+|++|+|+.+||+.++..+| +++.+|+.+|.| ||.|+|+||+++|.+.
T Consensus 82 -~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~ 149 (153)
T 3i5g_B 82 -DP---EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA 149 (153)
T ss_dssp -CC---HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred -cc---HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence 11 23688899999999999999999999999887 389999999988 9999999999999864
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=178.16 Aligned_cols=145 Identities=29% Similarity=0.493 Sum_probs=125.0
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
|+..++++++++++++|..+|.|++|.|+.+||..++. .+|..++..++..+|+.+|.+++|.|+|+||+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 79 (153)
T 3ox6_A 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMR-TMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 79 (153)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHH-HTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTT
T ss_pred CcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhc
Confidence 45678999999999999999999999999999999995 48999999999999999999999999999999887543322
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcc-cC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
... .......++.+|+.+|+|++|+|+.+||+.++.. .| ++..+|..+|.|+||.|+|+||+.+|.
T Consensus 80 ~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 80 ETA-DMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp CCH-HHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred ccc-ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 111 1111346788999999999999999999999877 55 489999999999999999999999875
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-22 Score=178.31 Aligned_cols=142 Identities=28% Similarity=0.471 Sum_probs=123.9
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++.+++++|..+|.|++|.|+.+||..++ +.+|..++..++..+|..+|.|++|.|+|+||+..+......
T Consensus 20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~-- 96 (169)
T 3qrx_A 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGE-- 96 (169)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHH-HHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHH--
T ss_pred CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcc--
Confidence 46788999999999999999999999999999999 458999999999999999999999999999999887643221
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
......+..+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|.+.+
T Consensus 97 ---~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 167 (169)
T 3qrx_A 97 ---RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167 (169)
T ss_dssp ---HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred ---cCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence 11234678899999999999999999999998776 489999999999999999999999997643
|
| >1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.1e-22 Score=184.15 Aligned_cols=159 Identities=18% Similarity=0.254 Sum_probs=125.9
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHH-----HHHHhhCCCCccHH-----HHHHHHHhhcCCCCcceehhch
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEF 475 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~-----~~l~~~~~~~~~~~-----~~~~~~~~~D~d~dg~I~f~EF 475 (574)
+...++++++++++++|..+|.|++|+|+.+||. .++ +.+|..++.. ++..+|+.+|.|++|.|+|+||
T Consensus 10 ~~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF 88 (195)
T 1qv0_A 10 KTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDIC-AKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF 88 (195)
T ss_dssp SCCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHH-HHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred CcccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHH
Confidence 3344589999999999999999999999999999 566 4589888876 6899999999999999999999
Q ss_pred HHHHhhhhccc-----ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccH
Q 008197 476 VAATLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISL 544 (574)
Q Consensus 476 ~~~~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~ 544 (574)
+..+....... ..........+..+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~ 168 (195)
T 1qv0_A 89 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDV 168 (195)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEH
T ss_pred HHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCH
Confidence 98775432211 111111222344899999999999999999999998766 3899999999999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCC
Q 008197 545 SEFRRLLRTASISSRNVPPSP 565 (574)
Q Consensus 545 ~EF~~~~~~~~~~~~~~~~~~ 565 (574)
+||+.+|.....+.++..||.
T Consensus 169 ~eF~~~~~~~~~s~d~~~~g~ 189 (195)
T 1qv0_A 169 DEMTRQHLGFWYTLDPEADGL 189 (195)
T ss_dssp HHHHHHHHHHHTTCCGGGTTT
T ss_pred HHHHHHHHHHccCCCccCccc
Confidence 999999998877777666663
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=176.25 Aligned_cols=146 Identities=27% Similarity=0.473 Sum_probs=125.4
Q ss_pred hhccccchHHhhhhccccccccCCC-CCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhh
Q 008197 405 ALASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 483 (574)
Q Consensus 405 ~~~~~~~~~~~~~l~~~F~~~D~d~-~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~ 483 (574)
.+...++++++++++++|..+|.|+ +|.|+.+||..++. .+|..++..++..+|+.+|.|++|.|+|+||+..+....
T Consensus 7 ~~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~ 85 (161)
T 1dtl_A 7 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSM 85 (161)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 3456788999999999999999999 99999999999995 489999999999999999999999999999998876543
Q ss_pred cccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 484 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 484 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
... ........+..+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|..
T Consensus 86 ~~~--~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 86 KDD--SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp C-------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred ccc--ccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 200 0111234688899999999999999999999998776 3889999999999999999999999974
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-22 Score=176.95 Aligned_cols=142 Identities=24% Similarity=0.401 Sum_probs=125.5
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
....++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..+|..+|.+++|.|+|+||+..+......
T Consensus 13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~ 91 (161)
T 3fwb_A 13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMK-ALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILK 91 (161)
T ss_dssp TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhc
Confidence 34568899999999999999999999999999999995 48999999999999999999999999999999887643221
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. ....++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 92 ~~-----~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 92 RD-----PLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp CC-----HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred CC-----cHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 11 124678899999999999999999999998776 4899999999999999999999999974
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7e-22 Score=174.61 Aligned_cols=140 Identities=29% Similarity=0.503 Sum_probs=122.0
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
|+..++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..+|..+|.+++|.|+|+||+..+......
T Consensus 1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~ 79 (147)
T 4ds7_A 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMR-SLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC 79 (147)
T ss_dssp ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-HhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC
Confidence 45678999999999999999999999999999999995 48999999999999999999999999999999887543221
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
. .....+..+|+.+|+|++|.|+.+||+.++...| ++..++..+| |+||.|+|+||+.+|.
T Consensus 80 ~-----~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 80 N-----DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp H-----HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred C-----CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 1 1134678899999999999999999999998776 4888999999 9999999999999885
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=180.46 Aligned_cols=155 Identities=19% Similarity=0.266 Sum_probs=127.7
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHH-----HHHHhhCCCCccHH-----HHHHHHHhhcCCCCcceehhchHHH
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEFVAA 478 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~-----~~l~~~~~~~~~~~-----~~~~~~~~~D~d~dg~I~f~EF~~~ 478 (574)
..+++++++++++|..+|.|++|.|+.+||. .++ +.+|..++.. ++..+|+.+|.|++|.|+|+||+..
T Consensus 9 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~ 87 (191)
T 1uhk_A 9 FDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVI-NNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG 87 (191)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred cCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence 3478889999999999999999999999999 677 5589888887 6899999999999999999999987
Q ss_pred Hhhhhccc-----ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHH
Q 008197 479 TLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEF 547 (574)
Q Consensus 479 ~~~~~~~~-----~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF 547 (574)
+....... ....+.....++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF 167 (191)
T 1uhk_A 88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167 (191)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHH
T ss_pred HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 76432211 111111112234899999999999999999999987766 3899999999999999999999
Q ss_pred HHHHHhcccCCCCCCCC
Q 008197 548 RRLLRTASISSRNVPPS 564 (574)
Q Consensus 548 ~~~~~~~~~~~~~~~~~ 564 (574)
+.+|.....+.++..||
T Consensus 168 ~~~~~~~~~s~d~~~~g 184 (191)
T 1uhk_A 168 TRQHLGFWYTMDPACEK 184 (191)
T ss_dssp HHHHHHHHTTCCGGGTT
T ss_pred HHHHHHHhcCCCCCCcc
Confidence 99999887777665565
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=179.97 Aligned_cols=157 Identities=18% Similarity=0.191 Sum_probs=130.3
Q ss_pred ccccchHHhhhhccccccc-cCCCCCCcCHHHHHHHHHhhC----CCCccHHHHHHHH-----------HhhcCCCCcce
Q 008197 407 ASTLDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDL----PWKLKESRVLEIL-----------QAIDCNTDGLV 470 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~~----~~~~~~~~~~~~~-----------~~~D~d~dg~I 470 (574)
+..+++++.++++++|..+ |.|++|+|+.+||..++.. + |..++..++..++ ..+|.|++|.|
T Consensus 3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i 81 (191)
T 2ccm_A 3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKK-ICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQV 81 (191)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCE
T ss_pred hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 3456788899999999999 9999999999999999965 5 8888888898888 99999999999
Q ss_pred ehhchHHHHhhhhcc---cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCccc
Q 008197 471 DFSEFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRIS 543 (574)
Q Consensus 471 ~f~EF~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~ 543 (574)
+|+||+..+...... ...........+..+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+
T Consensus 82 ~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~ 161 (191)
T 2ccm_A 82 TKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVT 161 (191)
T ss_dssp EHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCB
T ss_pred CHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcC
Confidence 999999877653210 0111122235688899999999999999999999997765 588999999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCC
Q 008197 544 LSEFRRLLRTASISSRNVPPS 564 (574)
Q Consensus 544 ~~EF~~~~~~~~~~~~~~~~~ 564 (574)
|+||+.+|.....+.++..|+
T Consensus 162 ~~Ef~~~~~~~~~s~d~~~~~ 182 (191)
T 2ccm_A 162 REIFARLWTEYFVSNDRGAKG 182 (191)
T ss_dssp HHHHHHHHHHHHHCCCTTCGG
T ss_pred HHHHHHHHHHHhcCCCCCCCc
Confidence 999999999877666655443
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=175.82 Aligned_cols=144 Identities=20% Similarity=0.366 Sum_probs=123.2
Q ss_pred cccchHHhhhhcccccccc-CCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 408 STLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D-~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
..++++++.+++++|..+| .|++|.|+.+||..++. .+|..++..++..+|+.+|.|++|.|+|+||+..+.......
T Consensus 5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~ 83 (158)
T 2jnf_A 5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILE-VLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE 83 (158)
T ss_dssp TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHH-HTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence 4578889999999999999 99999999999999995 489999999999999999999999999999998876543211
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. .......++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 84 ~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 155 (158)
T 2jnf_A 84 VN-PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155 (158)
T ss_dssp CC-TTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred cc-hhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 00 000112577899999999999999999999998766 4899999999999999999999999864
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.85 E-value=6.8e-22 Score=175.16 Aligned_cols=136 Identities=18% Similarity=0.258 Sum_probs=114.9
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhh-cCCCCcceehhchHHHHhhhhcc---cccc
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQL---EEHD 489 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~-D~d~dg~I~f~EF~~~~~~~~~~---~~~~ 489 (574)
++++++++|..+|.|++|.|+.+||..++. .+|..++..++..+|..+ |.|++|.|+|+||+..+...... ....
T Consensus 2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~ 80 (148)
T 1m45_A 2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA 80 (148)
T ss_dssp -CCCCTTCHHHHCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred hHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence 567899999999999999999999999995 489999999999999999 99999999999999887654211 1111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
. ...++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.+|..
T Consensus 81 ~---~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 81 K---TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp C---THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred c---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 1 23678899999999999999999999998776 3899999999999999999999999874
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=178.11 Aligned_cols=142 Identities=27% Similarity=0.534 Sum_probs=121.2
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
+..++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..+|+.+|.|++|.|+|+||+..+......
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~- 79 (179)
T 2f2o_A 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD- 79 (179)
T ss_dssp ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH-
T ss_pred cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccC-
Confidence 3467888999999999999999999999999999995 58999999999999999999999999999999877543211
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
......+..+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 80 ----~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 80 ----TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp ----HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred ----cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 11234678899999999999999999999998776 48999999999999999999999999754
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=176.11 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=122.2
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHH----HHHhhCCCCccHHHHH-----------HHHHhhcCCCCcceehhch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQ----ALAKDLPWKLKESRVL-----------EILQAIDCNTDGLVDFSEF 475 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~----~l~~~~~~~~~~~~~~-----------~~~~~~D~d~dg~I~f~EF 475 (574)
+++++++++++|..+|.|++|.|+.+||.. ++ +.+|..++..++. .+|..+|.|++|.|+|+||
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l-~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef 80 (176)
T 1nya_A 2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIA-EAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF 80 (176)
T ss_dssp CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHH-HHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHH-HHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 567889999999999999999999999999 45 5689999988877 8999999999999999999
Q ss_pred HHHHhhhhccccc--chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 476 VAATLHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 476 ~~~~~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
+.++......... ........++.+|+.+|.|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~ 160 (176)
T 1nya_A 81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLT 160 (176)
T ss_dssp HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 9887654332211 1111234688899999999999999999999987665 488999999999999999999999
Q ss_pred HHHhccc
Q 008197 550 LLRTASI 556 (574)
Q Consensus 550 ~~~~~~~ 556 (574)
+|.....
T Consensus 161 ~~~~~~~ 167 (176)
T 1nya_A 161 AVRDFHF 167 (176)
T ss_dssp HHSCCSS
T ss_pred HHHHHhc
Confidence 9987654
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=172.49 Aligned_cols=135 Identities=19% Similarity=0.372 Sum_probs=118.2
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
+++++++++++|..+|.|++|.|+.+||..++.. +|..++..++..+|+.+|.|++|.|+|+||+..+....... ..
T Consensus 1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~--~~ 77 (142)
T 2bl0_C 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQT--TS 77 (142)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTC--CC
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCC--Ch
Confidence 3567889999999999999999999999999954 89999999999999999999999999999998876532111 11
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
...++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+| |+||.|+|+||+.+|.
T Consensus 78 ---~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 78 ---EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp ---HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred ---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 23678899999999999999999999998776 3899999999 9999999999998764
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-21 Score=172.74 Aligned_cols=146 Identities=27% Similarity=0.464 Sum_probs=126.3
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
+...++++++.+++++|..+|.|++|.|+..||..++. .+|..++..++..+|+.+|.|++|.|+|+||+..+......
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~ 88 (162)
T 1top_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE 88 (162)
T ss_dssp HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcc
Confidence 44578999999999999999999999999999999995 48999999999999999999999999999999877643211
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.........++.+|+.+|.|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 89 --~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 89 --DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp --HHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred --ccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 11111245688899999999999999999999998776 38899999999999999999999999753
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.85 E-value=8.8e-22 Score=182.16 Aligned_cols=140 Identities=35% Similarity=0.643 Sum_probs=122.8
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++++++++|..+|.|++|.|+.+||..+| +.+|..++..++..+|+.+|.|++|.|+|+||+..+........
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l-~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 80 (188)
T 1s6i_A 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (188)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHH-TTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH-HHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence 45788889999999999999999999999999999 45899999999999999999999999999999987754332211
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
. ..++.+|+.||+|++|+|+.+||+.++...| +++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 81 ~------~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 145 (188)
T 1s6i_A 81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR 145 (188)
T ss_dssp C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred H------HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHc
Confidence 1 2466799999999999999999999988765 58999999999999999999999999743
|
| >2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=183.25 Aligned_cols=155 Identities=19% Similarity=0.245 Sum_probs=117.0
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC--CccHHHHHHHH-------HhhcCCCCcceehhchHHH
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEIL-------QAIDCNTDGLVDFSEFVAA 478 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~--~~~~~~~~~~~-------~~~D~d~dg~I~f~EF~~~ 478 (574)
..++++++.+++++|..+|.|++|.|+.+||..++.. +|. .++.+++..++ +.+|.|++|.|+|+||+..
T Consensus 28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~ 106 (208)
T 2hpk_A 28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR-MRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEA 106 (208)
T ss_dssp --------CHHHHHHHHHCTTCSSEECHHHHTHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHH
T ss_pred HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 5678888999999999999999999999999999954 676 78899999999 9999999999999999988
Q ss_pred Hhh----hh--cccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHH
Q 008197 479 TLH----VH--QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFR 548 (574)
Q Consensus 479 ~~~----~~--~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~ 548 (574)
+.. .. ..... .......++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+
T Consensus 107 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~ 185 (208)
T 2hpk_A 107 NRVFAEAERERERRGE-PSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELV 185 (208)
T ss_dssp HHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHH
T ss_pred HHHHhhhhhhhhccCC-hHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 751 00 11111 111122378899999999999999999999987654 58999999999999999999999
Q ss_pred HHHHhcccCC-CCCCCC
Q 008197 549 RLLRTASISS-RNVPPS 564 (574)
Q Consensus 549 ~~~~~~~~~~-~~~~~~ 564 (574)
.+|.....+. ++..|+
T Consensus 186 ~~~~~~~~~~~d~~~~g 202 (208)
T 2hpk_A 186 HLFRKFWMEPYDPQWDG 202 (208)
T ss_dssp HHHHHHHC---------
T ss_pred HHHHHHhcCCCCCCCcc
Confidence 9998766555 444343
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-21 Score=176.65 Aligned_cols=153 Identities=16% Similarity=0.216 Sum_probs=126.2
Q ss_pred cchHHhhhhccccccc-cCCCCCCcCHHHHHHHHHhhCC----CCccHHHHHHH-----------HHhhcCCCCcceehh
Q 008197 410 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLP----WKLKESRVLEI-----------LQAIDCNTDGLVDFS 473 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~-D~d~~G~i~~~El~~~l~~~~~----~~~~~~~~~~~-----------~~~~D~d~dg~I~f~ 473 (574)
++++++++++++|..+ |.|++|.|+.+||..++.. ++ ..++..++..+ |+.+|.|++|.|+|+
T Consensus 2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~ 80 (185)
T 2sas_A 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTR-YKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWE 80 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence 4677889999999999 9999999999999999955 56 77888788755 999999999999999
Q ss_pred chHHHHhhhhcc---cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHH
Q 008197 474 EFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE 546 (574)
Q Consensus 474 EF~~~~~~~~~~---~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~E 546 (574)
||+.++...... ...........++.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+|
T Consensus 81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~e 160 (185)
T 2sas_A 81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNR 160 (185)
T ss_dssp HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHH
Confidence 999887654221 1111111235688899999999999999999999997764 599999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCC
Q 008197 547 FRRLLRTASISSRNVPPS 564 (574)
Q Consensus 547 F~~~~~~~~~~~~~~~~~ 564 (574)
|+.+|.....+.+ ..|+
T Consensus 161 f~~~~~~~~~s~~-~~~~ 177 (185)
T 2sas_A 161 YKELYYRLLTSPA-ADAG 177 (185)
T ss_dssp HHHHHHHHHHCSS-CSGG
T ss_pred HHHHHHHHhcCCC-CCCc
Confidence 9999998776666 4343
|
| >2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-21 Score=168.57 Aligned_cols=138 Identities=17% Similarity=0.277 Sum_probs=120.7
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhh---cCCCCcceehhchHHHHhhhhccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---DCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~---D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
++++++.+++++|..+|.|++|.|+..||..++. .+|..++..++..+++.+ |.++ |.|+|+||+..+.......
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~ 79 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIAR-ALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK 79 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC
Confidence 5788899999999999999999999999999995 489999999999999999 9999 9999999998876542222
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
... ....++.+|+.+|+|++|+|+.+||+.++...| ++..+|.. |.|+||.|+|+||+.+|.+
T Consensus 80 ~~~---~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 80 DQG---TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred Ccc---hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 211 234678899999999999999999999998776 48899999 9999999999999999864
|
| >2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-21 Score=184.64 Aligned_cols=148 Identities=18% Similarity=0.242 Sum_probs=124.6
Q ss_pred HhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhh---------cCCCCcceehh
Q 008197 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDFS 473 (574)
Q Consensus 403 l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~---------D~d~dg~I~f~ 473 (574)
...+...++++++.+++++|..+|.|++|.|+.+||..++.+.+|..++..++..++..+ |.|++|.|+|+
T Consensus 38 ~~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~ 117 (226)
T 2lvv_A 38 RCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLV 117 (226)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCB
T ss_pred HHHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHH
Confidence 344566789999999999999999999999999999997667788888877777777776 99999999999
Q ss_pred chHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc---C----cHHHHHHHhCCCCCCcccHHH
Q 008197 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G----SIDPLLEEADIDKDGRISLSE 546 (574)
Q Consensus 474 EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~----~~~~~~~~~D~d~dG~i~~~E 546 (574)
||+.++........ ...++.+|+.||+|++|+|+.+||+.++..+ + ++..+|..+|.|+||.|+|+|
T Consensus 118 EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~E 191 (226)
T 2lvv_A 118 EFLEFRLMLCYIYD------IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDE 191 (226)
T ss_dssp CHHHHHHHHHHHHH------HHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHH
T ss_pred HHHHHHHHHHhccC------HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 99986443322211 2468889999999999999999999998755 3 589999999999999999999
Q ss_pred HHHHHHhccc
Q 008197 547 FRRLLRTASI 556 (574)
Q Consensus 547 F~~~~~~~~~ 556 (574)
|+.+|.....
T Consensus 192 F~~~~~~~~~ 201 (226)
T 2lvv_A 192 FSCWAVTKKL 201 (226)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhcCC
Confidence 9999987553
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-21 Score=173.41 Aligned_cols=140 Identities=21% Similarity=0.382 Sum_probs=122.5
Q ss_pred ccchHHhhhhccccccccC--CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 409 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~--d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
.++++++.+++++|..+|. |++|.|+.+||..++. .+|..++..++..+ ..+|.|++|.|+|+||+..+......
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~- 78 (156)
T 1wdc_C 2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCR-CLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC- 78 (156)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHH-HTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS-
T ss_pred CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHH-HcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc-
Confidence 4688899999999999999 9999999999999995 48999999999999 99999999999999999887654321
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHH--hCCCCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEE--ADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~--~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.... ...++.+|+.||+|++|+|+.+||+.++...| ++..+|+. +|.|+||.|+|+||+.+|...
T Consensus 79 ~~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_C 79 EQGT---FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151 (156)
T ss_dssp CCCC---HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred cCCh---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence 0111 23678899999999999999999999998776 38999999 999999999999999999864
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-21 Score=187.64 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=109.5
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCE--EEEEEeccchhhhhhh--hhh------hhh-ccchhhHHHHHHHHHHHHHh
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVV--SFQ------DLK-MILPIAVEDVKREVKILQAL 165 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~~~~--~~~------~~~-~~~~~~~~~~~~E~~il~~l 165 (574)
-|.+.+.||+|+||.||+|.+..+|+. ||||+++......... ... ... .........+.+|+.+|..|
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999998778989 9999976542111000 000 000 00012234678999999999
Q ss_pred cCCCC--cceEEEEEEcCCEEEEEEeccCC-C----chHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCEeecC
Q 008197 166 AGHEN--VVKFYNAFEDDNYVYIAMELCEG-G----ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDM 237 (574)
Q Consensus 166 ~~hpn--iv~~~~~~~~~~~~~lv~e~~~g-g----~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~iiHrDl 237 (574)
. |++ ++.++.. +..+|||||+.+ | +|.+.... +++..+..++.||+.||.||| +.||+||||
T Consensus 128 ~-~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDl 197 (258)
T 1zth_A 128 K-EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADL 197 (258)
T ss_dssp H-HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSC
T ss_pred H-hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence 5 775 3445543 246899999942 3 66554321 235578899999999999999 999999999
Q ss_pred CCCcEEEccCCCCCCeEEEeecccccc
Q 008197 238 KPENFLFKSAKEDSSLKATDFGLSDFI 264 (574)
Q Consensus 238 kp~Nill~~~~~~~~vkl~DFG~a~~~ 264 (574)
||+|||++ . .++|+|||+|...
T Consensus 198 kp~NILl~----~-~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYI----D-KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEES----S-SEEECCCTTCEET
T ss_pred CHHHEEEc----C-cEEEEECcccccC
Confidence 99999998 3 8999999999754
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-21 Score=182.04 Aligned_cols=142 Identities=16% Similarity=0.174 Sum_probs=123.8
Q ss_pred hhHHHHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHH
Q 008197 398 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477 (574)
Q Consensus 398 l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~ 477 (574)
++......+...++++++++++++|..+|.|++|.|+.+||..++ +.+|..++..+++.+|+.+|.|++|.|+|+||+.
T Consensus 33 ~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~~ 111 (220)
T 3sjs_A 33 VRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQ-FPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMA 111 (220)
T ss_dssp HHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCC-BGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 344444455677899999999999999999999999999999999 4579999999999999999999999999999998
Q ss_pred HHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 478 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
++... ..++.+|+.+|+|++|+|+.+||+.++...| +++.+++.+| |+||.|+|+||+.+|
T Consensus 112 ~~~~~------------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~~~ 178 (220)
T 3sjs_A 112 MYKFM------------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIAIC 178 (220)
T ss_dssp HHHHH------------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHHHH
T ss_pred HHHHH------------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHH
Confidence 76542 2577899999999999999999999998776 3899999999 999999999999998
Q ss_pred Hh
Q 008197 552 RT 553 (574)
Q Consensus 552 ~~ 553 (574)
..
T Consensus 179 ~~ 180 (220)
T 3sjs_A 179 AF 180 (220)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-21 Score=169.96 Aligned_cols=134 Identities=25% Similarity=0.453 Sum_probs=117.3
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
++++++++++++|..+|.|++|.|+.+||..++. .+|..++..++..++.. ++|.|+|+||+..+........
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~-- 73 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA-SMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTD-- 73 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHH-HTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSC--
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHH-HhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCC--
Confidence 4678899999999999999999999999999995 58999999999888876 8999999999988764322211
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
. ...+..+|+.||+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+||+.+|.+
T Consensus 74 ~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 74 P---EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140 (143)
T ss_dssp C---HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred c---HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence 1 23678899999999999999999999998777 4899999999999999999999999985
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-21 Score=181.49 Aligned_cols=154 Identities=25% Similarity=0.358 Sum_probs=125.6
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc-
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE- 487 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~- 487 (574)
.++++++++|+++|..+|.|++|+|+.+||..+ ..+|..++ +..+|..+|.|++|.|+|+||+..+........
T Consensus 22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~--~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~ 96 (202)
T 2bec_A 22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI--GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE 96 (202)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC--HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH--HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence 578899999999999999999999999999998 34666655 899999999999999999999988765432100
Q ss_pred ----------cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-C------cHHHHHHH----hCCCCCCcccHHH
Q 008197 488 ----------HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G------SIDPLLEE----ADIDKDGRISLSE 546 (574)
Q Consensus 488 ----------~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~------~~~~~~~~----~D~d~dG~i~~~E 546 (574)
.........++.+|+.||.|++|+|+.+||+.++... | ++..++.. +|.|+||.|+|+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E 176 (202)
T 2bec_A 97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176 (202)
T ss_dssp HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence 0011224578889999999999999999999999877 5 36666776 9999999999999
Q ss_pred HHHHHHhcccCCCCCCCCCCC
Q 008197 547 FRRLLRTASISSRNVPPSPSG 567 (574)
Q Consensus 547 F~~~~~~~~~~~~~~~~~~~~ 567 (574)
|+.+|...++.....+|.+.-
T Consensus 177 F~~~~~~~~~~~~~~~~~~~~ 197 (202)
T 2bec_A 177 FTKSLEKMDVEQKMSIRILKH 197 (202)
T ss_dssp HHHTTTTSCHHHHTSCTTTC-
T ss_pred HHHHHHHhCccceEEEeecCC
Confidence 999999988877776555443
|
| >1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-22 Score=176.47 Aligned_cols=140 Identities=19% Similarity=0.327 Sum_probs=113.1
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhchHHHHhhhhccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~I~f~EF~~~~~~~~~~~ 486 (574)
.++++++++++++|..+|.|++|+|+.+||..++. .+|..++..++..+|..+|.| ++|.|+|+||+..+.......
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~ 81 (151)
T 1w7j_B 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR 81 (151)
T ss_dssp --------CHHHHHHHHCCSSSSEEESTTHHHHHH-HTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC
Confidence 46788899999999999999999999999999995 589999999999999999999 999999999998876543211
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. .....+..+|+.+|+|++|+|+.+||+.++...| ++..+|..+| |+||.|+|+||+.+|.+
T Consensus 82 ~~---~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 82 GQ---GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp ---------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred CC---CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 11 1123567799999999999999999999998776 4899999999 99999999999998853
|
| >1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=8.9e-21 Score=172.75 Aligned_cols=149 Identities=18% Similarity=0.261 Sum_probs=121.0
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC----CCccHHH-H--------HHHHHhhcCCCCcceehhchHH
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESR-V--------LEILQAIDCNTDGLVDFSEFVA 477 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~----~~~~~~~-~--------~~~~~~~D~d~dg~I~f~EF~~ 477 (574)
+++++++++++|..+|.|++|.|+.+||..++.. ++ ..++..+ + +.+|+.+| ++|.|+|+||+.
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~ 77 (174)
T 1q80_A 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAER-FAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFIN 77 (174)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHH-HHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHH-HHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHH
Confidence 4577889999999999999999999999999955 55 7888777 6 46788888 999999999998
Q ss_pred HHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 478 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.+..... ...........++.+|+.+|+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 78 SMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHHHTT-STTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHcC-cccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 8765433 1111122235688899999999999999999999886654 5899999999999999999999999987
Q ss_pred cccCCCCCCCC
Q 008197 554 ASISSRNVPPS 564 (574)
Q Consensus 554 ~~~~~~~~~~~ 564 (574)
.. +.++..|+
T Consensus 157 ~~-~~~~~~~g 166 (174)
T 1q80_A 157 FF-MNDGDSTN 166 (174)
T ss_dssp HH-HCCCCSST
T ss_pred Hh-ccCcccCC
Confidence 76 54444343
|
| >2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=169.49 Aligned_cols=137 Identities=20% Similarity=0.327 Sum_probs=118.7
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
..++++++.+++++|..+|.|++|.|+.+||..++. .+|. .++..++..++... +|.|+|+||+..+.......
T Consensus 17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~ 91 (166)
T 2mys_B 17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFA-AMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGA 91 (166)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccC
Confidence 467889999999999999999999999999999995 4898 99999999999864 79999999998776432211
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.. ...++.+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 92 --~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~ 160 (166)
T 2mys_B 92 --DP---EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 160 (166)
T ss_pred --Cc---HHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhc
Confidence 11 24678899999999999999999999998776 38999999999999999999999999853
|
| >3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-21 Score=180.16 Aligned_cols=148 Identities=18% Similarity=0.251 Sum_probs=121.6
Q ss_pred HHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhh---------cCCCCcceeh
Q 008197 402 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDF 472 (574)
Q Consensus 402 ~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~---------D~d~dg~I~f 472 (574)
+...+...++++++.+++++|..+|.|++|.|+.+||..+|...+|..++..++..++..+ |.|++|.|+|
T Consensus 34 l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~ 113 (219)
T 3cs1_A 34 IRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDF 113 (219)
T ss_dssp HHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred HHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence 3444567789999999999999999999999999999999966578887766666655433 4489999999
Q ss_pred hchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-------cHHHHHHHhCCCCCCcccHH
Q 008197 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLS 545 (574)
Q Consensus 473 ~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~ 545 (574)
+||+..+....... ....++.+|+.||+|++|+|+.+||+.++...| +++.+|..+|.|+||.|+|+
T Consensus 114 ~EF~~~~~~~~~~~------~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~ 187 (219)
T 3cs1_A 114 VEFLEFRLMLCYIY------DFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFD 187 (219)
T ss_dssp BCHHHHHHHHHHHH------HHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHH
T ss_pred HHHHHHHHHHhccc------hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence 99998765432211 134688899999999999999999999885443 48999999999999999999
Q ss_pred HHHHHHHhcc
Q 008197 546 EFRRLLRTAS 555 (574)
Q Consensus 546 EF~~~~~~~~ 555 (574)
||+.+|....
T Consensus 188 EF~~~~~~~~ 197 (219)
T 3cs1_A 188 EFAAWASAVK 197 (219)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999998654
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=160.67 Aligned_cols=131 Identities=24% Similarity=0.348 Sum_probs=113.0
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
+++++|..+|.|++|.|+.+||..++. .++..++..++..+|+.+|.|++|.|+|+||+..+........ ......
T Consensus 1 ~l~~~F~~~D~~~~g~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~---~~~~~~ 76 (134)
T 1jfj_A 1 MAEALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDL---SDDKIG 76 (134)
T ss_dssp CHHHHHHHHCTTCSSEEEHHHHHHHHH-TTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSS---HHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhccccc---CCCHHH
Confidence 367889999999999999999999995 4888999999999999999999999999999987642111111 111235
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccCc--HHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~--~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
++.+|+.+|.|++|+|+.+||+.++...+. +..+|..+|.|+||.|+|+||+.+|
T Consensus 77 ~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHHhCHHHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 888999999999999999999999998887 8999999999999999999999886
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-20 Score=173.03 Aligned_cols=139 Identities=28% Similarity=0.405 Sum_probs=115.0
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
...++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..+|+.+|.|++|.|+|+||+..+.....
T Consensus 32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~------ 104 (204)
T 3e3r_A 32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLA-KLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMS------ 104 (204)
T ss_dssp --------CHHHHHHCTTCCSSBCHHHHHHHHH-TTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCC------
T ss_pred CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHH-HcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcC------
Confidence 456788999999999999999999999999995 5899999999999999999999999999999987653211
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-------C------cHHHHHHHhCC-CCCCcccHHHHHHHHHhccc
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------G------SIDPLLEEADI-DKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-------~------~~~~~~~~~D~-d~dG~i~~~EF~~~~~~~~~ 556 (574)
......+..+|+.+|.|++|+|+.+||+.++... + ++..+|+.+|. |+||.|+|+||+.+|...+.
T Consensus 105 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~ 184 (204)
T 3e3r_A 105 QAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSA 184 (204)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCc
Confidence 1223578889999999999999999999999853 2 27889999999 99999999999999987653
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-20 Score=166.24 Aligned_cols=143 Identities=19% Similarity=0.177 Sum_probs=116.0
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHH---hhCCCCccHHHHHHH-----------HHhhcCCCCcceehhchHHHH
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEI-----------LQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~---~~~~~~~~~~~~~~~-----------~~~~D~d~dg~I~f~EF~~~~ 479 (574)
++++++++|..+|.|++|.|+.+||..++. +.+|..++..++..+ |..+|.|++|.|+|+||+..+
T Consensus 2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~ 81 (166)
T 3akb_A 2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA 81 (166)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 357899999999999999999999999853 346888887777654 799999999999999999876
Q ss_pred hhhhcccccc-hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 480 LHVHQLEEHD-SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 480 ~~~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.......... .......+..+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 6442211111 111134588899999999999999999999987665 58899999999999999999999999765
Q ss_pred cc
Q 008197 555 SI 556 (574)
Q Consensus 555 ~~ 556 (574)
..
T Consensus 162 ~~ 163 (166)
T 3akb_A 162 FT 163 (166)
T ss_dssp TS
T ss_pred hc
Confidence 43
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-20 Score=165.37 Aligned_cols=140 Identities=31% Similarity=0.537 Sum_probs=115.0
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
+++++++++++|..+|.|++|.|+.+|| ..+ ..++..+ ++..+|+.+|.|++|.|+|+||+..+....... .
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l-~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~--~- 72 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSL-PELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKG--D- 72 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTS-GGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSC--C-
T ss_pred CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHh-hccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccC--C-
Confidence 4578899999999999999999999999 555 3355444 789999999999999999999998876532211 1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcc-cC------cHHHHHHH----hCCCCCCcccHHHHHHHHHhcccCCC
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEE----ADIDKDGRISLSEFRRLLRTASISSR 559 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~~------~~~~~~~~----~D~d~dG~i~~~EF~~~~~~~~~~~~ 559 (574)
....++.+|+.+|+|++|+|+.+||+.++.. .+ ++..++.. +|.|+||.|+|+||+.+|....+...
T Consensus 73 --~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~ 150 (155)
T 3ll8_B 73 --KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKK 150 (155)
T ss_dssp --HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGGGG
T ss_pred --HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCchhe
Confidence 1246888999999999999999999998877 34 36667776 99999999999999999998776544
Q ss_pred C
Q 008197 560 N 560 (574)
Q Consensus 560 ~ 560 (574)
.
T Consensus 151 ~ 151 (155)
T 3ll8_B 151 M 151 (155)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... | Back alignment and structure |
|---|
Probab=99.81 E-value=5.5e-20 Score=164.41 Aligned_cols=137 Identities=19% Similarity=0.361 Sum_probs=116.4
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
...++++++.+++++|..+|.|++|.|+.+||..+|.. +|..++..++..++. +++|.|+|+||+.++.......
T Consensus 9 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~ 83 (156)
T 1wdc_B 9 LTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGT 83 (156)
T ss_dssp ---CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHH-HSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSC
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCC
Confidence 45678899999999999999999999999999999954 799999999999885 4789999999998876432211
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.. ...++.+|+.||+|++|+|+.+||+.++...| ++..+|+.+|.| ||.|+|+||+.+|...
T Consensus 84 --~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~ 151 (156)
T 1wdc_B 84 --DS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 151 (156)
T ss_dssp --CC---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred --Ch---HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence 11 23678899999999999999999999998776 389999999999 9999999999999853
|
| >3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-20 Score=172.06 Aligned_cols=137 Identities=23% Similarity=0.328 Sum_probs=119.1
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
...++++++.+|+++|..||.|++|.|+..||..+|. .+|..++..++..++..+ +|.|+|+||+.++......
T Consensus 48 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~- 121 (196)
T 3dtp_E 48 FAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFD-SLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAG- 121 (196)
T ss_dssp SCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHH-TTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCS-
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcC-
Confidence 3467889999999999999999999999999999995 589999999999999887 8999999999887643221
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
... ...+..+|+.||.|++|+|+.+||+.++ ..| ++..+|..+|.|+||.|+|+||+.+|...
T Consensus 122 -~~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~ 190 (196)
T 3dtp_E 122 -TDE---EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG 190 (196)
T ss_dssp -SCC---HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred -CCc---HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence 111 2367889999999999999999999999 777 38999999999999999999999999753
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=168.08 Aligned_cols=126 Identities=25% Similarity=0.384 Sum_probs=114.3
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
.++++++|..+|.|++|.|+.+||..++ ..++..++..++..+|+.+|.|++|.|+|+||+..+...
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------------ 92 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------------ 92 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------------
Confidence 4689999999999999999999999999 557888899999999999999999999999999876431
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+.++..
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 157 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF 157 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 3577899999999999999999999998776 4889999999999999999999999864
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-21 Score=193.06 Aligned_cols=195 Identities=23% Similarity=0.311 Sum_probs=142.8
Q ss_pred CCHHHHHHHHHcc---ccCCCCCCCHHHHhcC------ccccccCCCC-----------------------CCCccHHHH
Q 008197 339 ISNSAKDFVKKLL---VKDPRARLTAAQALSH------PWVREGGDAS-----------------------EIPIDISVL 386 (574)
Q Consensus 339 ~~~~~~~li~~~L---~~dp~~Rps~~~~l~h------p~~~~~~~~~-----------------------~~~~~~~~l 386 (574)
++.++.+|.+.++ ..+|..|...++.+.| +|+.+..+.. +.+....++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~vl 96 (323)
T 1ij5_A 17 VHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASLL 96 (323)
T ss_dssp HHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHHH
Confidence 4567888888888 8899999999999998 9988762211 001111233
Q ss_pred HHHH-hhhhhhhhhHHHHhhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC
Q 008197 387 NNMR-QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465 (574)
Q Consensus 387 ~~l~-~~~~~s~l~~~~l~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d 465 (574)
.+|+ +|...+.++. +...++++++..++.+|..||.|++|.|+..||..+|.. +|..++..++..+|..+|.|
T Consensus 97 ~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~-lg~~~~~~~i~~l~~~~D~d 170 (323)
T 1ij5_A 97 KDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVEND 170 (323)
T ss_dssp HHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhcCC
Confidence 3443 3333333333 346789999999999999999999999999999999954 88888999999999999999
Q ss_pred CCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHH-HHHHhCCCC
Q 008197 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDP-LLEEADIDK 538 (574)
Q Consensus 466 ~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~-~~~~~D~d~ 538 (574)
++|.|+|.+|+.++. ....+..+|+.||.|++|+|+.+||..++ .| ++.. +|..+|.|+
T Consensus 171 ~~G~I~f~ef~~l~~------------~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~ 236 (323)
T 1ij5_A 171 TKGRMSYITLVAVAN------------DLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDE 236 (323)
T ss_dssp CSSTHHHHHHTTSHH------------HHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTC
T ss_pred CCCcCcHHHHHhhhh------------HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCC
Confidence 999999999975431 12345568999999999999999999887 33 3788 999999999
Q ss_pred CCcccHHHHHHHHHh
Q 008197 539 DGRISLSEFRRLLRT 553 (574)
Q Consensus 539 dG~i~~~EF~~~~~~ 553 (574)
||.|+|+||+.+|..
T Consensus 237 dG~Is~~EF~~~l~~ 251 (323)
T 1ij5_A 237 SDDVGFSEYVHLGLC 251 (323)
T ss_dssp SSCEEHHHHHHHHHH
T ss_pred CCEEeHHHHHHHHHH
Confidence 999999999888754
|
| >1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-20 Score=160.83 Aligned_cols=131 Identities=21% Similarity=0.298 Sum_probs=111.6
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
++++++++|..+|.|++|.|+.+||..++. .+|..++..++..++. +++|.|+|+||+..+...........
T Consensus 3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~--- 74 (140)
T 1ggw_A 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLR-ACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGD--- 74 (140)
T ss_dssp CCTTTHHHHHHTCSSSSSEECHHHHHHHHH-HTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCC---
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCccc---
Confidence 457899999999999999999999999995 4899999999999887 89999999999988765432211111
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|. +||.|+|+||+.+|..
T Consensus 75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 23678899999999999999999999987665 48999999999 9999999999999863
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-20 Score=161.74 Aligned_cols=128 Identities=23% Similarity=0.329 Sum_probs=111.5
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~ 497 (574)
++++|..+|.|++|.|+.+||..++. .+|..++..++..++.. +++|.|+|+||+..+..... .. ......+
T Consensus 7 l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~-~~---~~~~~~l 78 (145)
T 2bl0_B 7 IQECFQIFDKDNDGKVSIEELGSALR-SLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIK-TP---TEQSKEM 78 (145)
T ss_dssp HHHHHHHHCTTCSSCEEGGGHHHHHH-HTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCC-CG---GGGHHHH
T ss_pred HHHHHHHhCCCCcCccCHHHHHHHHH-HhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhh-cC---cccHHHH
Confidence 89999999999999999999999995 48999999999999988 78999999999988764320 11 1123468
Q ss_pred HHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 498 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 498 ~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+.+|+.+|+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.+|..
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 8899999999999999999999998776 3899999999999999999999999984
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=164.88 Aligned_cols=128 Identities=27% Similarity=0.344 Sum_probs=112.9
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.+.++++++|..+|.|++|.|+.+||..++. .++ ..++..++..+|+.+|.|++|.|+|+||+..+...
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~--------- 73 (172)
T 2znd_A 4 PDQSFLWNVFQRVDKDRSGVISDTELQQALS-NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--------- 73 (172)
T ss_dssp --CHHHHHHHHHHCTTCSSCEEHHHHHHHCC-CSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH---------
T ss_pred cchhHHHHHHHHhCCCCCCcCcHHHHHHHHH-hcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH---------
Confidence 3457899999999999999999999999994 466 67889999999999999999999999999876421
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|+|++|+|+.+||+.++...| ++..++..+|.|+||.|+|+||+.++..
T Consensus 74 ---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 138 (172)
T 2znd_A 74 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV 138 (172)
T ss_dssp ---HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred ---HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3577899999999999999999999988766 3889999999999999999999998864
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-19 Score=184.78 Aligned_cols=140 Identities=28% Similarity=0.555 Sum_probs=121.0
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++++++++|..+|.|++|.|+.+||..+|. .++..++.++++.+|+.+|.|++|.|+|+||+.++........
T Consensus 304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~-~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~ 382 (450)
T 3sg6_A 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD 382 (450)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccc
Confidence 456788899999999999999999999999999995 4899999999999999999999999999999988764322111
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
. ...++.+|+.||+|++|+|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|..
T Consensus 383 --~---~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 383 --S---EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp --C---HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred --h---hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 1 23678899999999999999999999998776 3899999999999999999999999863
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.5e-19 Score=166.13 Aligned_cols=135 Identities=24% Similarity=0.311 Sum_probs=115.1
Q ss_pred hHHhhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 412 DEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
.-..++++++|..||.| ++|.|+.+||..++. .++...+..+++.+|+.+|.|++|.|+|+||+.++....... .
T Consensus 18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~--~- 93 (204)
T 1jba_A 18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFK-VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT--L- 93 (204)
T ss_dssp HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHH-CCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCC--C-
T ss_pred CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHH-HhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCC--H-
Confidence 33456788899999999 899999999999995 478888899999999999999999999999998876543211 1
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc--------------------C---cHHHHHHHhCCCCCCcccHHHH
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------------------G---SIDPLLEEADIDKDGRISLSEF 547 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--------------------~---~~~~~~~~~D~d~dG~i~~~EF 547 (574)
...++.+|+.+|.|++|+|+.+||+.++... . ++..+|+.+|.|+||.|+|+||
T Consensus 94 ---~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef 170 (204)
T 1jba_A 94 ---EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170 (204)
T ss_dssp ---THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence 1357789999999999999999999887654 1 3788999999999999999999
Q ss_pred HHHHHh
Q 008197 548 RRLLRT 553 (574)
Q Consensus 548 ~~~~~~ 553 (574)
+.++..
T Consensus 171 ~~~~~~ 176 (204)
T 1jba_A 171 VEGARR 176 (204)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 999974
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-19 Score=163.95 Aligned_cols=126 Identities=22% Similarity=0.338 Sum_probs=111.8
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCC-------CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~-------~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
++++++++|..+| |++|.|+.+||..++...+| ..++..++..+|+.+|.|++|.|+|+||+..+...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence 5788999999999 99999999999999966335 67789999999999999999999999999876531
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|+|++|+|+.+||+.++...| ++..++..+| |+||.|+|+||+.++..
T Consensus 77 --------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~ 140 (173)
T 1alv_A 77 --------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR 140 (173)
T ss_dssp --------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred --------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence 3577899999999999999999999997766 3888999999 99999999999998864
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=99.78 E-value=9.9e-20 Score=171.22 Aligned_cols=145 Identities=23% Similarity=0.436 Sum_probs=116.8
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++.+++++|..+|.|++|+|+.+||..++ .+|..++. +.+++.+|.|++|.|+|+||+..+........
T Consensus 21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~--~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~ 95 (208)
T 2ct9_A 21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP--ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIED 95 (208)
T ss_dssp HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH--HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccc
Confidence 46788999999999999999999999999999865 35666653 56889999999999999999988765432111
Q ss_pred cc----------hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-C------cHHHH----HHHhCCCCCCcccHHH
Q 008197 488 HD----------SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G------SIDPL----LEEADIDKDGRISLSE 546 (574)
Q Consensus 488 ~~----------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~------~~~~~----~~~~D~d~dG~i~~~E 546 (574)
.. .......++.+|+.||+|++|+|+.+||+.++... | ++..+ |..+|.|+||.|+|+|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~E 175 (208)
T 2ct9_A 96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTE 175 (208)
T ss_dssp ----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred hhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 10 00124578899999999999999999999998764 5 25555 9999999999999999
Q ss_pred HHHHHHhcccC
Q 008197 547 FRRLLRTASIS 557 (574)
Q Consensus 547 F~~~~~~~~~~ 557 (574)
|+.+|....+.
T Consensus 176 F~~~~~~~~~~ 186 (208)
T 2ct9_A 176 FVKVLEKVDVE 186 (208)
T ss_dssp HHHTTTTSCGG
T ss_pred HHHHHhccChH
Confidence 99999875543
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.78 E-value=7.7e-19 Score=161.41 Aligned_cols=138 Identities=25% Similarity=0.393 Sum_probs=113.4
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++.+++.++.+.|+.+ |++|.|+.+||..++.......++..++..+|+.+|.|++|.|+|+||+.++.......
T Consensus 13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~- 89 (183)
T 1s6c_A 13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT- 89 (183)
T ss_dssp SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCC-
T ss_pred cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCC-
Confidence 356777777766666654 78999999999999965333347899999999999999999999999998876543211
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C--------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
....++.+|+.+|.|++|+|+.+||+.++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 90 -----~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~ 164 (183)
T 1s6c_A 90 -----VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 164 (183)
T ss_dssp -----HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred -----HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 12467889999999999999999999988654 2 378899999999999999999999
Q ss_pred HHHh
Q 008197 550 LLRT 553 (574)
Q Consensus 550 ~~~~ 553 (574)
+|..
T Consensus 165 ~~~~ 168 (183)
T 1s6c_A 165 SXQE 168 (183)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9874
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=166.06 Aligned_cols=141 Identities=27% Similarity=0.412 Sum_probs=115.9
Q ss_pred cccchHHhhhhccccccccCC--CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 408 STLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
..++.+++.+++++|..+|.| ++|.|+.+||..++.. +....+..+..+|+.+|.|++|.|+|+||+..+......
T Consensus 40 ~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 117 (226)
T 2zfd_A 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPN 117 (226)
T ss_dssp SSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred CCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccC
Confidence 468899999999999999999 9999999999999954 333445578889999999999999999999877654211
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc----ccC------c----HHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKG------S----IDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~----~~~------~----~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
. . ....++.+|+.||.|++|+|+.+||+.++. ..| + +..+|+.+|.|+||.|+|+||+.+|
T Consensus 118 ~--~---~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~ 192 (226)
T 2zfd_A 118 A--P---IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLV 192 (226)
T ss_dssp S--C---HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHH
T ss_pred C--C---HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 1 1 134688899999999999999999999884 233 2 3556679999999999999999999
Q ss_pred Hhcc
Q 008197 552 RTAS 555 (574)
Q Consensus 552 ~~~~ 555 (574)
....
T Consensus 193 ~~~~ 196 (226)
T 2zfd_A 193 LRHP 196 (226)
T ss_dssp HHSG
T ss_pred HhCh
Confidence 8643
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=166.27 Aligned_cols=137 Identities=21% Similarity=0.344 Sum_probs=117.5
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++.+++..+++.|.. .|++|.|+.+||..++....+...+...++.+|+.+|.|++|.|+|+||+.++.......
T Consensus 60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~-- 135 (229)
T 3dd4_A 60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGT-- 135 (229)
T ss_dssp HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSC--
T ss_pred CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCC--
Confidence 5677888888888876 578899999999999977677788889999999999999999999999998876543211
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc------------------CcHHHHHHHhCCCCCCcccHHHHHHH
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRL 550 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~EF~~~ 550 (574)
....++.+|+.||+|++|+|+.+||..++... ..++.+|+.+|.|+||.|+|+||+.+
T Consensus 136 ----~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~ 211 (229)
T 3dd4_A 136 ----VQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES 211 (229)
T ss_dssp ----HHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHH
T ss_pred ----hHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence 13468889999999999999999999988754 24899999999999999999999999
Q ss_pred HHh
Q 008197 551 LRT 553 (574)
Q Consensus 551 ~~~ 553 (574)
+.+
T Consensus 212 ~~~ 214 (229)
T 3dd4_A 212 CQK 214 (229)
T ss_dssp HHT
T ss_pred HHh
Confidence 985
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=160.74 Aligned_cols=133 Identities=20% Similarity=0.360 Sum_probs=111.3
Q ss_pred hhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 416 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 416 ~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
.+++++|..||.| ++|.|+.+||..++....+...+..++..+|+.+|.|++|.|+|+||+.++...... .. .
T Consensus 25 ~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~---~~---~ 98 (190)
T 2l2e_A 25 KELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRG---EL---N 98 (190)
T ss_dssp HHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCS---CS---H
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCC---CH---H
Confidence 3567789999999 899999999999996644455677899999999999999999999999887543221 11 2
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhccc------------------CcHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~------------------~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
..+..+|+.+|.|++|+|+.+||..++... .++..+|+.+|.|+||.|+|+||+.++...
T Consensus 99 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 176 (190)
T 2l2e_A 99 DKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD 176 (190)
T ss_dssp HHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC
T ss_pred HHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence 367789999999999999999999887651 138889999999999999999999999753
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.5e-19 Score=163.44 Aligned_cols=128 Identities=18% Similarity=0.325 Sum_probs=113.3
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC-----CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~-----~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
.++.++++|++ |..+|.|++|.|+.+||..++.. +|. .++..+++.+|+.+|.|++|.|+|+||+..+...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~-- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--
T ss_pred CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--
Confidence 56668889999 99999999999999999999955 665 5789999999999999999999999999876532
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|+|++|+|+.+||+.++...| +++.++..+ |+||.|+|+||+.++..
T Consensus 103 ----------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~ 165 (198)
T 1juo_A 103 ----------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVK 165 (198)
T ss_dssp ----------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHH
T ss_pred ----------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 3577899999999999999999999998766 488899999 89999999999998864
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=162.70 Aligned_cols=141 Identities=25% Similarity=0.416 Sum_probs=115.9
Q ss_pred cccchHHhhhhccccccccCC--CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 408 STLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
..++.+++.+++++|..+|.| ++|.|+.+||..++.. .....+..++.+|+.+|.|++|.|+|+||+..+......
T Consensus 29 ~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~ 106 (207)
T 2ehb_A 29 TPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPS 106 (207)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTT
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccC
Confidence 468899999999999999999 9999999999999954 333445678889999999999999999999887654211
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc----ccC------c----HHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKG------S----IDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~----~~~------~----~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
. . ....++.+|+.+|.|++|+|+.+||+.++. ..| + +..+|..+|.|+||.|+|+||+.+|
T Consensus 107 ~--~---~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 181 (207)
T 2ehb_A 107 A--P---VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFV 181 (207)
T ss_dssp S--C---HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred C--C---HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 1 1 134688899999999999999999999884 223 1 3556679999999999999999999
Q ss_pred Hhcc
Q 008197 552 RTAS 555 (574)
Q Consensus 552 ~~~~ 555 (574)
....
T Consensus 182 ~~~~ 185 (207)
T 2ehb_A 182 SLNP 185 (207)
T ss_dssp HHCG
T ss_pred HhCh
Confidence 8643
|
| >2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A | Back alignment and structure |
|---|
Probab=99.76 E-value=6e-19 Score=155.73 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=112.1
Q ss_pred chHHhhhhccccccccCCC-CCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 411 DDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~-~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
..+++.+++++|..+|.|+ +|.|+.+||..++. .+|..++..++..++..+|.+ |+|+||+..+...... ..
T Consensus 9 ~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~--~~ 81 (146)
T 2qac_A 9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNAR-KLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHD--KD 81 (146)
T ss_dssp HHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCT--TC
T ss_pred HHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcC--cc
Confidence 3456788999999999999 99999999999995 589999999999999999987 9999999877643211 11
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
. ...++.+|+.||+|++|+|+.+||+.++...| ++..+|..+ |+||.|+|+||+.+|.
T Consensus 82 ~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 82 N---VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp C---HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred h---HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 1 23678899999999999999999999998776 488899999 9999999999999985
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-18 Score=163.61 Aligned_cols=131 Identities=24% Similarity=0.339 Sum_probs=106.7
Q ss_pred hhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 416 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 416 ~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
++++++|..||.+ ++|.|+.+||..++ +.++..+.. .+++.+|+.+|.|++|.|+|+||+.++...... . .
T Consensus 19 ~ei~~~f~~fD~~~~~G~is~~El~~~l-~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~---~---~ 91 (211)
T 2ggz_A 19 QETHVWYRTFMMEYPSGLQTLHEFKTLL-GLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQE---K---M 91 (211)
T ss_dssp -----CCCSHHHHCTTSEEEHHHHHHHT-TCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCS---S---H
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccC---c---h
Confidence 4568899999998 89999999999999 457776554 569999999999999999999999887643221 1 1
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.||.|++|+|+.+||+.++...+ .+..+|+.+|.|+||.|+|+||+.+|..
T Consensus 92 ~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 163 (211)
T 2ggz_A 92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163 (211)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence 34678899999999999999999999886542 2788999999999999999999999874
|
| >3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.2e-19 Score=160.59 Aligned_cols=137 Identities=14% Similarity=0.258 Sum_probs=111.0
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhc---CCCCcceehhchHHHHhhh
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID---CNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D---~d~dg~I~f~EF~~~~~~~ 482 (574)
+....+.+++.+++++|..|| ++|.|+.+||..++ |..+++..+..+|..+| .+++|.|+|+||+..+...
T Consensus 18 ~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l----g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~ 91 (179)
T 3a8r_A 18 VTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI----GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQL 91 (179)
T ss_dssp HHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH----TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHH
T ss_pred HHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH----CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHH
Confidence 333334466788999999999 89999999999865 67788889999999888 5678999999999876543
Q ss_pred hcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc-ccC-------------cHHHHHHHhCCCCCCcccHHHHH
Q 008197 483 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG-LKG-------------SIDPLLEEADIDKDGRISLSEFR 548 (574)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~-~~~-------------~~~~~~~~~D~d~dG~i~~~EF~ 548 (574)
.. .. ....++.+|+.||+|++|+|+.+||+.++. .+| ++..+|..+|.|+||.|+|+||+
T Consensus 92 ~~---~~---~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~ 165 (179)
T 3a8r_A 92 TD---QG---FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLE 165 (179)
T ss_dssp HC---CC---HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHH
T ss_pred cC---CC---HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 21 11 234788999999999999999999999886 332 47889999999999999999999
Q ss_pred HHHHhc
Q 008197 549 RLLRTA 554 (574)
Q Consensus 549 ~~~~~~ 554 (574)
.+|...
T Consensus 166 ~~~~~~ 171 (179)
T 3a8r_A 166 ALLLQS 171 (179)
T ss_dssp HHHC--
T ss_pred HHHHhC
Confidence 999753
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=162.61 Aligned_cols=137 Identities=25% Similarity=0.353 Sum_probs=112.4
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
.++.+++.++.+.|+.. |++|.|+.+||..++.. ++. ..+..++..+|+.+|.|++|.|+|+||+.++.......
T Consensus 47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~-l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~- 122 (224)
T 1s1e_A 47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQ-FFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGT- 122 (224)
T ss_dssp SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHT-TCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCC-
T ss_pred CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHH-hcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCC-
Confidence 47777766665555543 48999999999999965 554 47889999999999999999999999998876543211
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C--------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
....++.+|+.||.|++|+|+.+||+.++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 123 -----~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~ 197 (224)
T 1s1e_A 123 -----VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 197 (224)
T ss_dssp -----HHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHH
T ss_pred -----HHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 12467889999999999999999999887653 2 388999999999999999999999
Q ss_pred HHHhc
Q 008197 550 LLRTA 554 (574)
Q Consensus 550 ~~~~~ 554 (574)
+|...
T Consensus 198 ~~~~~ 202 (224)
T 1s1e_A 198 SCQED 202 (224)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-18 Score=162.77 Aligned_cols=132 Identities=23% Similarity=0.342 Sum_probs=111.3
Q ss_pred hhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccH-HHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHH
Q 008197 415 LADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 492 (574)
Q Consensus 415 ~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~-~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~ 492 (574)
.++++++|..||.+ ++|.|+.+||..++ +.++..++. .++..+|..+|.|++|.|+|+||+.++...... .
T Consensus 13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l-~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~---~--- 85 (198)
T 2r2i_A 13 ATECHQWYKKFMTECPSGQLTLYEFKQFF-GLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKG---K--- 85 (198)
T ss_dssp TSCHHHHHHHHHHHCTTSEECHHHHHHHH-TCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSC---C---
T ss_pred HHHHHHHHHHHHHhCCCCcCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccC---c---
Confidence 45678889999998 89999999999999 557777664 469999999999999999999999887654321 1
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------------c-HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 493 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------S-IDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 493 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------~-~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
....++.+|+.||.|++|+|+.+||+.++...+ + +..+|+.+|.|+||.|+|+||+.+|..
T Consensus 86 ~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 159 (198)
T 2r2i_A 86 VDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159 (198)
T ss_dssp HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred hHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 124678899999999999999999999887542 2 788999999999999999999999864
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=159.70 Aligned_cols=136 Identities=24% Similarity=0.368 Sum_probs=113.7
Q ss_pred cccchHHhhhhccccccccC-----CC-C--CCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhchHHH
Q 008197 408 STLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAA 478 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~-----d~-~--G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-I~f~EF~~~ 478 (574)
+.++++++.+++++|..+|. |+ + |.|+.+||.. + +.+|..++.. .++..+|.|++|. |+|+||+.+
T Consensus 12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l-~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~ 86 (183)
T 1dgu_A 12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFKE---RICRVFSTSPAKDSLSFEDFLDL 86 (183)
T ss_dssp CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-S-TTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-H-HhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHH
Confidence 46788999999999999999 68 8 9999999999 7 5688887754 5788899999999 999999988
Q ss_pred HhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------cHH----HHHHHhCCCCCCccc
Q 008197 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SID----PLLEEADIDKDGRIS 543 (574)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~----~~~~~~D~d~dG~i~ 543 (574)
+........ ....++.+|+.||+|++|+|+.+||+.++...+ ++. .+|..+|.|+||.|+
T Consensus 87 ~~~~~~~~~-----~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~ 161 (183)
T 1dgu_A 87 LSVFSDTAT-----PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 161 (183)
T ss_dssp HHHHSTTCC-----HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEE
T ss_pred HHHhcCCCC-----HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEc
Confidence 765432111 123688899999999999999999999886543 133 499999999999999
Q ss_pred HHHHHHHHHh
Q 008197 544 LSEFRRLLRT 553 (574)
Q Consensus 544 ~~EF~~~~~~ 553 (574)
|+||+.+|..
T Consensus 162 ~~EF~~~~~~ 171 (183)
T 1dgu_A 162 LSEFQHVISR 171 (183)
T ss_dssp HHHHHHHHCS
T ss_pred HHHHHHHHHh
Confidence 9999999975
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-18 Score=155.81 Aligned_cols=114 Identities=16% Similarity=0.202 Sum_probs=99.4
Q ss_pred ccCCCCCCcCHHHHHHHHHhhC------CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHH
Q 008197 425 IDVDKNGSISLEEMRQALAKDL------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498 (574)
Q Consensus 425 ~D~d~~G~i~~~El~~~l~~~~------~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~ 498 (574)
=+.|++|+|+.+||..+|.. + |..++.++++.+|+.+|.|++|.|+|+||+.++... ..++
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~-l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------------~~l~ 79 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQ-ELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------------VHYQ 79 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHH-HHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------------HHHH
T ss_pred ccCCCCCcCCHHHHHHHHHH-HHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------HHHH
Confidence 46899999999999999955 5 668889999999999999999999999999876432 2577
Q ss_pred HHHHhcCCCCCCcccHHHHHHhhccc----C------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 499 AAFEKFDIDRDGFITPEELRMHTGLK----G------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 499 ~~F~~~D~d~~G~I~~~El~~~l~~~----~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.+|+.|| |++|+|+.+||+.++... | ++..++..+| |+||.|+|+||+.+|..
T Consensus 80 ~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~ 142 (174)
T 2i7a_A 80 HVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR 142 (174)
T ss_dssp HHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred HHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence 8999999 999999999999999887 6 3888999999 99999999999998864
|
| >2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-19 Score=166.15 Aligned_cols=148 Identities=18% Similarity=0.239 Sum_probs=119.3
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHh-----hCCCCccHHHHHHH---------HHhhcCCCCcceeh
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEI---------LQAIDCNTDGLVDF 472 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-----~~~~~~~~~~~~~~---------~~~~D~d~dg~I~f 472 (574)
...++++++++++++|..+|.|++|+|+.+||..++.. .+|..++..++..+ |+.+|.|++|.|+|
T Consensus 5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~ 84 (186)
T 2hps_A 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN 84 (186)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence 34567888999999999999999999999999999954 24888888999988 49999999999999
Q ss_pred hchHHHHhhhhcccccchHHHHHHHHHHH--HhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccH
Q 008197 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAF--EKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISL 544 (574)
Q Consensus 473 ~EF~~~~~~~~~~~~~~~~~~~~~~~~~F--~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~ 544 (574)
+| .++.... .... ....+..+| +.||+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|
T Consensus 85 ~E--~~~~~~~--~~~~---~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~ 157 (186)
T 2hps_A 85 AT--DSLLKMK--GEEK---AMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157 (186)
T ss_dssp HH--HHHHHCC--THHH---HHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEH
T ss_pred HH--HHHHHhc--CChH---HHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcH
Confidence 99 3332211 1111 112344566 888999999999999999997766 3899999999999999999
Q ss_pred HHHHHHHHhcccCCCCC
Q 008197 545 SEFRRLLRTASISSRNV 561 (574)
Q Consensus 545 ~EF~~~~~~~~~~~~~~ 561 (574)
+||+.+|.....+.++.
T Consensus 158 ~ef~~~~~~~~~~~~~~ 174 (186)
T 2hps_A 158 DEFLVTVNDFLFGLEET 174 (186)
T ss_dssp HHHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 99999998866555443
|
| >1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-18 Score=171.01 Aligned_cols=129 Identities=23% Similarity=0.345 Sum_probs=115.2
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHH-HHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~-~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.....+..+|..+|.|++|+|+.+||..++ +|..++..++.. +|..+|.|++|.|+|+||+.++....
T Consensus 185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~-------- 253 (323)
T 1ij5_A 185 NDLAALVADFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL-------- 253 (323)
T ss_dssp HHHHTSCCCHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH--------
Confidence 456789999999999999999999999998 577788889999 99999999999999999998775432
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhh-cccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHT-GLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l-~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
.+..+|+.||.|++|+|+.+||+.++ ...| ++..+|..+|.|+||.|+|+||+.+|.....
T Consensus 254 ----~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~~~ 321 (323)
T 1ij5_A 254 ----VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMFH 321 (323)
T ss_dssp ----HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC-
T ss_pred ----HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhcC
Confidence 46679999999999999999999999 6665 5999999999999999999999999986543
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.9e-18 Score=153.09 Aligned_cols=119 Identities=18% Similarity=0.321 Sum_probs=105.3
Q ss_pred cccccccCCCCCCcCHHHHHHHHHhhCCC-----CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 420 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 420 ~~F~~~D~d~~G~i~~~El~~~l~~~~~~-----~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
+.|..+|.|++|.|+.+||..++.. +|. .++..++..+|+.+|.|++|.|+|+||+..+...
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------ 71 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------------ 71 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHH-HTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------------
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHh-hcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------
Confidence 3588999999999999999999955 665 6789999999999999999999999999876532
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|.|++|+|+.+||+.++...| ++..++..+ |+||.|+|+||+.++..
T Consensus 72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 134 (167)
T 1gjy_A 72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK 134 (167)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence 3577899999999999999999999998776 388899998 89999999999998864
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3e-18 Score=158.45 Aligned_cols=137 Identities=21% Similarity=0.385 Sum_probs=112.0
Q ss_pred ccchHHhhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 409 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
.++.+ +++++|..||.+ ++|.|+.+||..++....+.......+..+|+.+|.|++|.|+|+||+.++.......
T Consensus 21 ~~~~~---~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~- 96 (190)
T 1g8i_A 21 YFTEK---EVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGT- 96 (190)
T ss_dssp SSCHH---HHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCC-
T ss_pred CCCHH---HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCC-
Confidence 44544 456677778877 8999999999999976545456678899999999999999999999998876542211
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C--------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
....++.+|+.+|.|++|+|+.+||..++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 97 -----~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~ 171 (190)
T 1g8i_A 97 -----LDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 171 (190)
T ss_dssp -----HHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred -----HHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHH
Confidence 12467889999999999999999999987652 1 388899999999999999999999
Q ss_pred HHHhc
Q 008197 550 LLRTA 554 (574)
Q Consensus 550 ~~~~~ 554 (574)
++...
T Consensus 172 ~~~~~ 176 (190)
T 1g8i_A 172 GSKAD 176 (190)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99753
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-18 Score=160.58 Aligned_cols=132 Identities=19% Similarity=0.254 Sum_probs=110.5
Q ss_pred hhhccccccccCC-CCCCcCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 416 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 416 ~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
.++.++|..||.+ ++|.|+.+||..++.. ++. .++..++..+|+.+|.|++|.|+|+||+.++........ .
T Consensus 33 ~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~--~--- 106 (207)
T 2d8n_A 33 EELCSWYQSFLKDCPTGRITQQQFQSIYAK-FFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKT--N--- 106 (207)
T ss_dssp HHHHHHHHHHHHHCTTSEEEHHHHHHHHHH-TCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSS--S---
T ss_pred HHHHHHHHHHHhhCCCCCCCHHHHHHHHHH-hccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCH--H---
Confidence 3566678888888 7999999999999965 554 377889999999999999999999999988765432111 1
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C----------------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~----------------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|+|++|+|+.+||+.++... | .+..+|+.+|.|+||.|+|+||+.+|..
T Consensus 107 -~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 185 (207)
T 2d8n_A 107 -QKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185 (207)
T ss_dssp -TTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHH
T ss_pred -HHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHh
Confidence 256779999999999999999999988764 3 3889999999999999999999999986
Q ss_pred c
Q 008197 554 A 554 (574)
Q Consensus 554 ~ 554 (574)
.
T Consensus 186 ~ 186 (207)
T 2d8n_A 186 N 186 (207)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-18 Score=174.40 Aligned_cols=153 Identities=18% Similarity=0.238 Sum_probs=102.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhh-----hhhh--ccchhhHHHHHHHHHHHHHhcCCC
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSF-----QDLK--MILPIAVEDVKREVKILQALAGHE 169 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~E~~il~~l~~hp 169 (574)
-|+++..||+|+||.||+|.+ .+|+.||||+++......+.... .... .......-...+|...|.+|. ++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~-~~ 173 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY-EE 173 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH-HT
T ss_pred EEEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH-hc
Confidence 399999999999999999997 46999999998654221110000 0000 000011112356888888883 44
Q ss_pred Ccc--eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 170 NVV--KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 170 niv--~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
++. ..++. .. .+|||||++|++|.... ....+..++.||+.+|.+||++|||||||||.|||++..
T Consensus 174 gv~vp~p~~~--~~--~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 174 GFPVPEPIAQ--SR--HTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE 241 (397)
T ss_dssp TCSCCCEEEE--ET--TEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred CCCCCeeeec--cC--ceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence 442 33332 22 37999999998875422 123456789999999999999999999999999999852
Q ss_pred CCC-------CCeEEEeeccccc
Q 008197 248 KED-------SSLKATDFGLSDF 263 (574)
Q Consensus 248 ~~~-------~~vkl~DFG~a~~ 263 (574)
++. ..+.|+||+-+..
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCcccccccccceEEEEeCCccc
Confidence 211 1388999997754
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-18 Score=164.72 Aligned_cols=137 Identities=23% Similarity=0.361 Sum_probs=112.9
Q ss_pred cccchHHhhhhccccccccC-----CC-C--CCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcc-eehhchHHH
Q 008197 408 STLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAA 478 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~-----d~-~--G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~-I~f~EF~~~ 478 (574)
+.++.+++.++.++|..+|. |+ + |.|+.+||.. + +.+|..++. +.+|+.+|.|++|. |+|+||+.+
T Consensus 43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l-~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~ 117 (214)
T 2l4h_A 43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFK---ERICRVFSTSPAKDSLSFEDFLDL 117 (214)
T ss_dssp CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-C-HHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-h-hccCCChHH---HHHHHHhCcCCCCCEecHHHHHHH
Confidence 57899999999999999998 66 6 9999999998 6 447777664 46889999999999 999999988
Q ss_pred HhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------cHH----HHHHHhCCCCCCccc
Q 008197 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SID----PLLEEADIDKDGRIS 543 (574)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~----~~~~~~D~d~dG~i~ 543 (574)
+....... . ....++.+|+.||.|++|+|+.+||+.++...+ ++. .+|..+|.|+||.|+
T Consensus 118 ~~~~~~~~--~---~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is 192 (214)
T 2l4h_A 118 LSVFSDTA--T---PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 192 (214)
T ss_dssp HHHTSSCS--C---HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBC
T ss_pred HHHHcCCC--C---HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCC
Confidence 76543211 1 124688899999999999999999998875432 233 499999999999999
Q ss_pred HHHHHHHHHhc
Q 008197 544 LSEFRRLLRTA 554 (574)
Q Consensus 544 ~~EF~~~~~~~ 554 (574)
|+||+.++...
T Consensus 193 ~~EF~~~~~~~ 203 (214)
T 2l4h_A 193 LSEFQHVISRS 203 (214)
T ss_dssp SHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 99999999753
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.3e-18 Score=156.65 Aligned_cols=135 Identities=22% Similarity=0.405 Sum_probs=110.2
Q ss_pred ccchHHhhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc
Q 008197 409 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 486 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~ 486 (574)
.++.++ ++++|..||.+ ++|.|+.+||..++.. ++.. .....+..+|..+|.|++|.|+|+||+..+......
T Consensus 21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~- 95 (193)
T 1bjf_A 21 DFTEHE---IQEWYKGFLRDCPSGHLSMEEFKKIYGN-FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRG- 95 (193)
T ss_dssp SCCHHH---HHHHHHHHHHHSTTSEEEHHHHHHHHTT-TSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSS-
T ss_pred CCCHHH---HHHHHHHHHHHCCCCCcCHHHHHHHHHH-hcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCC-
Confidence 456554 55678888888 8999999999999954 5543 356789999999999999999999999887654221
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C--------------cHHHHHHHhCCCCCCcccHHHHH
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFR 548 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~ 548 (574)
. ....++.+|+.+|.|++|+|+.+||..++... | .+..+|+.+|.|+||.|+|+||+
T Consensus 96 --~---~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~ 170 (193)
T 1bjf_A 96 --K---LEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170 (193)
T ss_dssp --C---HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred --C---HHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence 1 12467889999999999999999999887531 2 28889999999999999999999
Q ss_pred HHHHh
Q 008197 549 RLLRT 553 (574)
Q Consensus 549 ~~~~~ 553 (574)
.++..
T Consensus 171 ~~~~~ 175 (193)
T 1bjf_A 171 RGAKS 175 (193)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99974
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-18 Score=152.42 Aligned_cols=118 Identities=19% Similarity=0.322 Sum_probs=105.0
Q ss_pred ccccccCCCCCCcCHHHHHHHHHhhCCC-----CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 421 QFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 421 ~F~~~D~d~~G~i~~~El~~~l~~~~~~-----~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.|..+|.|++|.|+.+||..++.. +|. .++..++..+|+.+|.|++|.|+|+||+..+... .
T Consensus 4 ~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------~ 70 (165)
T 1k94_A 4 TYFSAVAGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------------N 70 (165)
T ss_dssp HHHHHHHGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------------H
T ss_pred HHHHHhCCCCCcCCHHHHHHHHHH-hccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------------H
Confidence 588999999999999999999954 676 6789999999999999999999999999876432 3
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.++.+|+.+|+|++|+|+.+||+.++...| ++..++..+ |+||.|+|+||+.++..
T Consensus 71 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~ 132 (165)
T 1k94_A 71 AWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVK 132 (165)
T ss_dssp HHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHH
Confidence 577899999999999999999999998776 488899998 89999999999999864
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=153.77 Aligned_cols=136 Identities=22% Similarity=0.386 Sum_probs=109.4
Q ss_pred ccchHHhhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 409 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
.++.+++ .++|..||.+ ++|.|+.+||..++....+...+...+..+|..+|.|++|.|+++||+.++.......
T Consensus 21 ~~~~~~i---~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~- 96 (190)
T 1fpw_A 21 YFDRREI---QQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGT- 96 (190)
T ss_dssp CSTHHHH---HHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCC-
T ss_pred CCCHHHH---HHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCC-
Confidence 4566555 4556666665 8999999999999966434445567899999999999999999999998876543211
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C--------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
. ...++.+|+.+|.|++|+|+.+||..++... | ++..+|+.+|.|+||.|+|+||+.
T Consensus 97 -~----~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 171 (190)
T 1fpw_A 97 -L----EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp -S----THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred -c----HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 1 1357789999999999999999999887651 2 388899999999999999999999
Q ss_pred HHHh
Q 008197 550 LLRT 553 (574)
Q Consensus 550 ~~~~ 553 (574)
++..
T Consensus 172 ~~~~ 175 (190)
T 1fpw_A 172 GSKV 175 (190)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 9985
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-17 Score=160.80 Aligned_cols=137 Identities=21% Similarity=0.357 Sum_probs=112.4
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++.+++..+.+.|+. .+++|.|+.+||..++....+...+..++..+|+.+|.|++|.|+|+||+.++.......
T Consensus 87 ~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~-- 162 (256)
T 2jul_A 87 KFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGT-- 162 (256)
T ss_dssp TSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCC--
T ss_pred CCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccC--
Confidence 4677776666555543 248999999999999976545677888999999999999999999999998876543211
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C--------------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRRL 550 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~--------------~~~~~~~~~D~d~dG~i~~~EF~~~ 550 (574)
....++.+|+.+|.|++|+|+.+||..++... | ++..+|..+|.|+||.|+|+||+.+
T Consensus 163 ----~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~ 238 (256)
T 2jul_A 163 ----VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLET 238 (256)
T ss_dssp ----HHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHH
T ss_pred ----hHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHH
Confidence 13467889999999999999999999987643 2 3889999999999999999999999
Q ss_pred HHh
Q 008197 551 LRT 553 (574)
Q Consensus 551 ~~~ 553 (574)
|..
T Consensus 239 ~~~ 241 (256)
T 2jul_A 239 CQK 241 (256)
T ss_dssp HHH
T ss_pred HHh
Confidence 985
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.71 E-value=4.7e-18 Score=165.60 Aligned_cols=141 Identities=20% Similarity=0.285 Sum_probs=115.3
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccH------HHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE------SRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~------~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
.+++.+.++++++|..||.|++|.|+.+||..++.. +|..++. ..+..+|..+|.|++|.|+|+||+..+...
T Consensus 9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~ 87 (263)
T 2f33_A 9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQE-LLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE 87 (263)
T ss_dssp TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHH-HHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-HHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence 467777889999999999999999999999999954 6655554 789999999999999999999999876432
Q ss_pred hc------ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C------cHHH----HHHHhCCCCCCcc
Q 008197 483 HQ------LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G------SIDP----LLEEADIDKDGRI 542 (574)
Q Consensus 483 ~~------~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~------~~~~----~~~~~D~d~dG~i 542 (574)
.. ...... ...++.+|+.+|+|++|+|+.+||+.++... | ++.. ++..+|.|+||.|
T Consensus 88 ~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i 164 (263)
T 2f33_A 88 ENFLLLFRCQQLKS---CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKL 164 (263)
T ss_dssp TTHHHHHGGGTSSC---HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCB
T ss_pred hhHHHHHHHhhccH---HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeE
Confidence 00 011111 2468889999999999999999999988755 3 2444 9999999999999
Q ss_pred cHHHHHHHHHh
Q 008197 543 SLSEFRRLLRT 553 (574)
Q Consensus 543 ~~~EF~~~~~~ 553 (574)
+|+||+.++..
T Consensus 165 ~~~ef~~~~~~ 175 (263)
T 2f33_A 165 ELTEMARLLPV 175 (263)
T ss_dssp CHHHHHHHSCT
T ss_pred cHHHHHHHHHH
Confidence 99999998753
|
| >2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.8e-17 Score=161.37 Aligned_cols=135 Identities=20% Similarity=0.313 Sum_probs=111.1
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhC----CCCccHHHHHH----HHHhhcCCCCcceehhchHHHHhhhh---
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL----PWKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLHVH--- 483 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~----~~~~~~~~~~~----~~~~~D~d~dg~I~f~EF~~~~~~~~--- 483 (574)
..+++.+|..+|.|++|+|+.+||..++.. + |..++..++.. +|..+|.|++|.|+|+||+..+....
T Consensus 102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~ 180 (263)
T 2f33_A 102 CEEFMKTWRKYDTDHSGFIETEELKNFLKD-LLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL 180 (263)
T ss_dssp HHHHHHHHTTSSTTTCSSBCHHHHHHHHHH-HHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence 456889999999999999999999999965 4 88888888876 99999999999999999998765310
Q ss_pred --cccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----------cHHHHHHH-hCCCCCCcccHHHHHHH
Q 008197 484 --QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEE-ADIDKDGRISLSEFRRL 550 (574)
Q Consensus 484 --~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~~~~~-~D~d~dG~i~~~EF~~~ 550 (574)
...... ....+..+|+.||+|++|+|+.+||+.++...+ ++..++.. +|.|+||.|+|+||+.+
T Consensus 181 ~~~~~~~~---~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~ 257 (263)
T 2f33_A 181 LKFQGIKM---CGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALI 257 (263)
T ss_dssp HHHHHTCC---CHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHH
T ss_pred HHhcCcch---HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHH
Confidence 000111 124678899999999999999999998875432 47888887 79999999999999999
Q ss_pred HHh
Q 008197 551 LRT 553 (574)
Q Consensus 551 ~~~ 553 (574)
|..
T Consensus 258 ~~~ 260 (263)
T 2f33_A 258 LSA 260 (263)
T ss_dssp HCC
T ss_pred Hhc
Confidence 974
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-17 Score=162.30 Aligned_cols=139 Identities=21% Similarity=0.328 Sum_probs=109.8
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhC---CCCccHHHHH----HHHHhhcCCCCcceehhchHHHHhhhh----
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVL----EILQAIDCNTDGLVDFSEFVAATLHVH---- 483 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~---~~~~~~~~~~----~~~~~~D~d~dg~I~f~EF~~~~~~~~---- 483 (574)
..+++.+|..+|.|++|.|+.+||..++.... |..++..++. .+|+.+|.|++|.|+|+||+..+....
T Consensus 103 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 182 (272)
T 2be4_A 103 SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLL 182 (272)
T ss_dssp HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSST
T ss_pred HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHh
Confidence 45688999999999999999999999996522 7788877765 499999999999999999987654310
Q ss_pred --cccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----------cHHH----HHHHhCCCCCCcccHHHH
Q 008197 484 --QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDP----LLEEADIDKDGRISLSEF 547 (574)
Q Consensus 484 --~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------~~~~----~~~~~D~d~dG~i~~~EF 547 (574)
.............+..+|+.+|+|++|+|+.+||+.++...+ ++.. +|..+|.|+||.|+|+||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF 262 (272)
T 2be4_A 183 QFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262 (272)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHH
T ss_pred hhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 000001112235688899999999999999999998886432 2444 999999999999999999
Q ss_pred HHHHHh
Q 008197 548 RRLLRT 553 (574)
Q Consensus 548 ~~~~~~ 553 (574)
+.+|..
T Consensus 263 ~~~~~~ 268 (272)
T 2be4_A 263 ALCLGL 268 (272)
T ss_dssp HHHTTC
T ss_pred HHHHcc
Confidence 999873
|
| >2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A | Back alignment and structure |
|---|
Probab=99.66 E-value=2.9e-17 Score=160.86 Aligned_cols=142 Identities=25% Similarity=0.404 Sum_probs=113.5
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHh---hCCC--CccHHHHHHH----HHhhcCCCCcceehhchHHHH
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPW--KLKESRVLEI----LQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~---~~~~--~~~~~~~~~~----~~~~D~d~dg~I~f~EF~~~~ 479 (574)
.++..+.++++++|..||.|++|.|+.+||..+|.. .+|. .++..++..+ |..+|.|++|.|+|+||+..+
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 83 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI 83 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 355666778999999999999999999999999952 5788 8888887764 578899999999999999874
Q ss_pred hhh--------hcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C------c----HHHHHHHhCCC
Q 008197 480 LHV--------HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G------S----IDPLLEEADID 537 (574)
Q Consensus 480 ~~~--------~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~------~----~~~~~~~~D~d 537 (574)
... ........ ...++.+|+.+|+|++|.|+.+||+.++... | + +..+|..+|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~ 160 (272)
T 2be4_A 84 LPQEENFLLIFRREAPLDN---SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKN 160 (272)
T ss_dssp SCHHHHHHHHHHHHSCCCC---HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSS
T ss_pred hhhhHHHHHHHhhccCccc---HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccC
Confidence 321 11100111 2367889999999999999999999988754 3 1 34599999999
Q ss_pred CCCcccHHHHHHHHHh
Q 008197 538 KDGRISLSEFRRLLRT 553 (574)
Q Consensus 538 ~dG~i~~~EF~~~~~~ 553 (574)
+||.|+|+||+.++..
T Consensus 161 ~dg~i~~~ef~~~~~~ 176 (272)
T 2be4_A 161 KDGRLDLNDLARILAL 176 (272)
T ss_dssp CSSEEEHHHHGGGSCC
T ss_pred CCCcCcHHHHHHHHhh
Confidence 9999999999988753
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-16 Score=176.86 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=117.2
Q ss_pred ccchHH-hhhhccccccccCCCCCCcCHHHHHHHHHhhC-------CCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 409 TLDDEE-LADLRDQFDAIDVDKNGSISLEEMRQALAKDL-------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 409 ~~~~~~-~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~-------~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.+++++ +++++++|..+| |++|.|+.+||..+|...+ +..++.++++.+|+.+|.|++|.|+|+||+.++.
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~ 602 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 602 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 367777 889999999999 9999999999999996632 6788999999999999999999999999998775
Q ss_pred hhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. ..++.+|+.||+|++|+|+.+||+.++...| +++.+|..+| |+||.|+|+||+.+|..
T Consensus 603 ~~------------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~ 668 (714)
T 3bow_A 603 KI------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 668 (714)
T ss_dssp HH------------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred HH------------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 32 3577899999999999999999999998776 3899999999 99999999999999864
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=126.82 Aligned_cols=97 Identities=27% Similarity=0.377 Sum_probs=84.3
Q ss_pred hCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 445 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
++|. +++++++.+|+.+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA-----SKS---LDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG-----GSC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC-----hhH---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4788 99999999999998 88999999999876421 111 2468889999999999999999999999877
Q ss_pred ---C------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 525 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 525 ---~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
| ++..+|..+|.|+||.|+|+||+.+|.
T Consensus 71 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 71 SPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4 388999999999999999999999886
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.62 E-value=8.7e-16 Score=128.14 Aligned_cols=97 Identities=22% Similarity=0.365 Sum_probs=84.4
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 524 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 524 (574)
++..+++++++.+|+.+| ++|.|+|+||+..+.... .. ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~~-----~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~ 72 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGLSS-----KT---PDQIKKVFGILDQDKSGFIEEEELQLFLKNFS 72 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCTT-----CC---HHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcCC-----Cc---HHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh
Confidence 567789999999999998 899999999998765311 11 2468889999999999999999999999887
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 525 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 525 --~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
+ ++..+|+.+|.|+||.|+|+||+.+|+
T Consensus 73 ~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 73 SSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4 389999999999999999999999986
|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-16 Score=179.22 Aligned_cols=142 Identities=20% Similarity=0.326 Sum_probs=121.6
Q ss_pred hhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhh
Q 008197 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 483 (574)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~ 483 (574)
......++.+++.+++++|..||.|++|+|+.+||..+|. .+|..+++.+++.+|..+|.|+||.|+|+||+.++....
T Consensus 713 ~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~-~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 791 (863)
T 1sjj_A 713 TRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI-SMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRET 791 (863)
T ss_dssp HCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHH-HHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHS
T ss_pred HhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 3445677888899999999999999999999999999995 489999999999999999999999999999998775432
Q ss_pred cccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCC-----CCCcccHHHHHHHHHh
Q 008197 484 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID-----KDGRISLSEFRRLLRT 553 (574)
Q Consensus 484 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d-----~dG~i~~~EF~~~~~~ 553 (574)
... .. ...+..+|+.| .|++|+|+.+||+.++. ..+++.+|..+|.+ +||.|+|+||+.+|.+
T Consensus 792 ~~~--~~---~~~l~~aF~~~-~d~~G~Is~~El~~~l~-~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~ 859 (863)
T 1sjj_A 792 ADT--DT---ADQVMASFKIL-AGDKNYITVDELRRELP-PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG 859 (863)
T ss_dssp TTC--SS---SHHHHHHHHGG-GTSSSEEEHHHHHHHSC-HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred cCC--CC---HHHHHHHHHHH-hCCCCcCcHHHHHHHCC-HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence 111 11 12577899999 89999999999999986 34689999999987 7999999999999974
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-15 Score=126.53 Aligned_cols=98 Identities=24% Similarity=0.376 Sum_probs=85.0
Q ss_pred hCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 445 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
++|..+++.+++.+++.+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT-----AKS---ADDIKKAFFVIDQDKSGFIEEDELKLFLQVF 71 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG-----GSC---HHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC-----hhh---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 4789999999999999998 89999999999876421 111 2468889999999999999999999998876
Q ss_pred ---C------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 525 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 525 ---~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
| ++..+|+.+|.|+||.|+|+||+.+|.
T Consensus 72 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 72 SAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp STTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 4 388999999999999999999999885
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1e-15 Score=127.88 Aligned_cols=99 Identities=28% Similarity=0.401 Sum_probs=85.0
Q ss_pred hCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 445 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
++|..+++.+++.+++.+| ++|.|+|+||+..+... . .. ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 71 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGLK----A-MS---ANDVKKVFKAIDADASGFIEEEELKFVLKSF 71 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT----T-SC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHccC----c-ch---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4577889999999999998 89999999999876321 1 11 2468889999999999999999999999877
Q ss_pred ---C------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 525 ---G------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 525 ---~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
| ++..+|..+|.|+||.|+|+||+.+|..
T Consensus 72 ~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 72 AADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp CTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred hhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 4 3889999999999999999999999874
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-15 Score=126.81 Aligned_cols=98 Identities=27% Similarity=0.397 Sum_probs=83.9
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 524 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 524 (574)
+|..+++++++.+++.+|. +|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~ 71 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK-----GKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFS 71 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHC
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc-----cCc---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 4556889999999999987 8999999999877532 111 2368889999999999999999999998876
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 525 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 525 --~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+ ++..+|+.+|.|+||.|+|+||+.+|.+
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 72 AHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 4 3899999999999999999999999975
|
| >1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-16 Score=168.24 Aligned_cols=129 Identities=15% Similarity=0.163 Sum_probs=58.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
..++++|..||.|++|.|+.+||..+|. .+|..+++++++.+|+.+|.|++|.|+|+||+.++..... . .
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~-~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~-----~----~ 80 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLK-ELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ-----R----A 80 (624)
T ss_dssp ----------------------------------------------------------CTTHHHHHHTC-----C----H
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc-----H----H
Confidence 3689999999999999999999999995 5899999999999999999999999999999988764321 1 2
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhccc-C-------cHHHHHHHhCCC----CCCcccHHHHHHHHHhcc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLK-G-------SIDPLLEEADID----KDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~-------~~~~~~~~~D~d----~dG~i~~~EF~~~~~~~~ 555 (574)
+++.+|+.||.+ +|+|+.+||+.++... + ++.++|+.+|.| +||.|+|+||+.+|....
T Consensus 81 el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~ 151 (624)
T 1djx_A 81 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 151 (624)
T ss_dssp HHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCcc
Confidence 578899999985 9999999999988743 2 388999999998 799999999999998654
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-15 Score=126.80 Aligned_cols=98 Identities=21% Similarity=0.280 Sum_probs=83.5
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 524 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 524 (574)
+|..+++++++.+++.+| ++|.|+|+||+..+... .. ....++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~-----~~---~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK-----KK---SADDVKKVFHILDKDKSGFIEEDELGSILKGFS 71 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG-----GS---CHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHC
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC-----cc---hHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHh
Confidence 455688999999999998 89999999999876421 11 12468889999999999999999999998876
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 525 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 525 --~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+ ++..+++.+|.|+||.|+|+||+.+|..
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 72 SDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred ccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 3 3889999999999999999999999874
|
| >2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.4e-15 Score=139.64 Aligned_cols=138 Identities=17% Similarity=0.246 Sum_probs=110.1
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
+......+.++|..+|.|++|.|+..||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++...........
T Consensus 52 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~ 130 (211)
T 2ggz_A 52 NQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNL-IMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQT 130 (211)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCS
T ss_pred CcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-hccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCcc
Confidence 3344567899999999999999999999999955 566777889999999999999999999999988765421110000
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
......+..+|+.+|.|++|.|+.+||..++....++.++|.. .++|+||+.+|.....
T Consensus 131 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-------~~d~~~f~~~~~~~~~ 189 (211)
T 2ggz_A 131 LSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK-------SFDFSNVLRVICNGKQ 189 (211)
T ss_dssp CTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHHHHH-------HSCTTHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHHHhc-------cCCHHHHHHHHhcCCC
Confidence 1112357789999999999999999999999988888999884 3459999999997653
|
| >1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.58 E-value=6.7e-15 Score=136.08 Aligned_cols=125 Identities=20% Similarity=0.201 Sum_probs=106.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 63 ~~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~---~~---~~ 129 (191)
T 1y1x_A 63 ATTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQ---VS---EQ 129 (191)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHH-------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCC---CC---HH
Confidence 35567799999999999999999999854 3688999999999999999999999877643211 11 23
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCc--ccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGR--ISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~--i~~~EF~~~~~~ 553 (574)
.+..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|+||. ++|+||+.++..
T Consensus 130 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 130 TFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 5778999999999999999999999988778999999999999999 789999998863
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-15 Score=124.24 Aligned_cols=97 Identities=21% Similarity=0.315 Sum_probs=82.8
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 524 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 524 (574)
++..+++++++.+|+.+| ++|.|+|+||+..+... . .. ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS----K-MS---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ 71 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG----G-SC---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC----c-cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence 456788999999999998 89999999999876321 1 11 2467889999999999999999999999876
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 525 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 525 --~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
| ++..+|+.+|.|+||.|+|+||+.+|.
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 72 SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 3 388999999999999999999999885
|
| >1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-15 Score=139.53 Aligned_cols=124 Identities=22% Similarity=0.305 Sum_probs=96.8
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc-------cccc
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ-------LEEH 488 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~-------~~~~ 488 (574)
..+..+|..+|.|++|.|+..||..++.. ++...+..++..+|+.+|.|++|.|+++||..++..... +..
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~- 140 (193)
T 1bjf_A 63 KFAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPE- 140 (193)
T ss_dssp HHHHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCG-
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCc-
Confidence 45788999999999999999999999954 666778889999999999999999999999988765321 111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI 542 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i 542 (574)
........+..+|+.+|.|++|.|+.+||..++....++..+| .+|+|+||.|
T Consensus 141 ~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 141 DESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp GGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHHHTT-CC--------
T ss_pred ccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHHHHHHh-ccCCCCCCCC
Confidence 1111234678899999999999999999999998888899999 9999999986
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.4e-15 Score=171.39 Aligned_cols=129 Identities=21% Similarity=0.339 Sum_probs=100.7
Q ss_pred cchHH-hhhhccccccccCCCCCCcCHHHHHHHHHhhCCC--------CccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 410 LDDEE-LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 410 ~~~~~-~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~--------~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
+++++ +++++++|..+| |++|.|+.+||..+|.. ++. .++.++++.+|+.+|.|++|.|+|+||+..+.
T Consensus 527 l~~~e~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~ 604 (900)
T 1qxp_A 527 LSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 604 (900)
T ss_dssp --------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHH
T ss_pred CCcchHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHH-hhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 33333 789999999999 99999999999999944 554 78899999999999999999999999998765
Q ss_pred hhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. ..++.+|+.||+|++|+|+.+||+.++...| +++.++..+| |+||.|+|+||+.+|..
T Consensus 605 ~~------------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~ 670 (900)
T 1qxp_A 605 RI------------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR 670 (900)
T ss_dssp HH------------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred HH------------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence 42 3677899999999999999999999998776 4889999999 99999999999998864
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.55 E-value=6e-15 Score=128.15 Aligned_cols=97 Identities=20% Similarity=0.296 Sum_probs=60.5
Q ss_pred HHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-------
Q 008197 453 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------- 525 (574)
Q Consensus 453 ~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------- 525 (574)
+.++.+|+.+|.|++|.|+|+||+.++..... . ......++.+|+.||+|++|+|+.+||+.++...|
T Consensus 3 p~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~--~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 77 (135)
T 3h4s_E 3 PTEKSMLLETTSTTKMETKYEDMLPVMAEKMD--V---EEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKE 77 (135)
T ss_dssp ----------------CCCC-----------C--H---HHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHH
T ss_pred hhHHHHHHHHcCCCCCcEeHHHHHHHHHHHcc--c---cchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHH
Confidence 35678999999999999999999987654211 1 11235788899999999999999999999998777
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 526 SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 526 ~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
++..+|..+|.|+||.|+|+||+.+|.+.
T Consensus 78 e~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 106 (135)
T 3h4s_E 78 DAQGMVREGDLDGDGALNQTEFCVLMVRL 106 (135)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence 28999999999999999999999999764
|
| >2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-14 Score=131.03 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=104.9
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ...
T Consensus 45 ~~~~l~~~~D~~~~g~i~~~ef~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~ 111 (172)
T 2znd_A 45 TVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR---LS---DQF 111 (172)
T ss_dssp HHHHHHHHHCSSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC---CC---HHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCC---CC---HHH
Confidence 4566788999999999999999998854 3678999999999999999999999877643211 11 235
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCccc--HHHHHHHHHh
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRIS--LSEFRRLLRT 553 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~--~~EF~~~~~~ 553 (574)
+..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|+||.|+ |+||+.++..
T Consensus 112 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 112 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 77799999999999999999999988777799999999999999995 8999988763
|
| >2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=2e-14 Score=130.52 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=102.4
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc-cchHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE-HDSEKWH 494 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~-~~~~~~~ 494 (574)
++++.+|..+|.|++|.|+.+||..++.. ..++..+|+.+| |++|.|+.+||..++........ ... .
T Consensus 46 ~~~~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~---~ 114 (174)
T 2i7a_A 46 DECRSLVALMELKVNGRLDQEEFARLWKR-------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFIS---R 114 (174)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHH-------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCC---H
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCC---H
Confidence 45677889999999999999999998854 257899999999 99999999999988765410001 111 1
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCC-cccHHHHHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG-RISLSEFRRLLR 552 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG-~i~~~EF~~~~~ 552 (574)
..+..+++.+| |++|.|+.+||..++.....+..+|+.+|+|++| .++++||+.++.
T Consensus 115 ~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 115 ELLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp HHHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 35677899999 9999999999999888777789999999999999 459999998764
|
| >2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-15 Score=125.87 Aligned_cols=97 Identities=23% Similarity=0.326 Sum_probs=82.8
Q ss_pred CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-
Q 008197 446 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK- 524 (574)
Q Consensus 446 ~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~- 524 (574)
++..+++.+++.+|+.+| ++|.|+|+||+..+... ... ...++.+|+.||+|++|+|+.+||+.++...
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~----~~~----~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~ 71 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS----KKS----SSQLKEIFRILDNDQSGFIEEDELKYFLQRFE 71 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT----TCC----SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHS
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC----ccc----HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 677899999999999998 89999999999876421 111 1256789999999999999999999988765
Q ss_pred --C------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 525 --G------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 525 --~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
+ ++..++..+|.|+||.|+|+||+.+|.
T Consensus 72 ~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 72 SGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp SSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred hccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 3 489999999999999999999999986
|
| >2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4e-14 Score=132.51 Aligned_cols=123 Identities=18% Similarity=0.247 Sum_probs=103.9
Q ss_pred cccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-CCcceehhchHHHHhhhhcccccchHHHHHHHHHHHH
Q 008197 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 502 (574)
Q Consensus 424 ~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d-~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~ 502 (574)
.++.+++|.|+.+||..++. .++ ++..++..+|..+|.+ ++|.|+++||..++....... .. ...+..+|+
T Consensus 7 ~mg~~~~g~l~~~el~~~~~-~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~--~~---~~~~~~~f~ 78 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQL-NTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT--DP---KAYAQHVFR 78 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHH-HSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTS--CC---HHHHHHHHH
T ss_pred hhccccCCCCCHHHHHHHHH-HcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCC--Cc---HHHHHHHHH
Confidence 37889999999999999994 466 5889999999999999 799999999998876542211 11 235778999
Q ss_pred hcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 503 KFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 503 ~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.+|.|++|.|+.+||..++...+ ++..+|+.+|.|+||.|+++||..++...
T Consensus 79 ~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~ 136 (207)
T 2d8n_A 79 SFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI 136 (207)
T ss_dssp HHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence 99999999999999999886554 58999999999999999999999999863
|
| >3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=133.87 Aligned_cols=124 Identities=12% Similarity=0.067 Sum_probs=104.4
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++....... . ..
T Consensus 87 ~~~~~l~~~~D~d~dg~I~~~EF~~~~~~-------~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~---~---~~ 153 (220)
T 3sjs_A 87 QTALRMMRIFDTDFNGHISFYEFMAMYKF-------MELAYNLFVMNARARSGTLEPHEILPALQQLGFYI---N---QR 153 (220)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCC---C---HH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCC---C---HH
Confidence 35677888999999999999999999854 26799999999999999999999998876432211 1 12
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHh-CCCCCC------cccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA-DIDKDG------RISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~-D~d~dG------~i~~~EF~~~~~~ 553 (574)
.+..+|+.+| |++|.|+.+||..++.....+.++|+.+ |.+++| .|+|+||+.++..
T Consensus 154 ~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 154 TSLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 5677999999 9999999999999998888899999999 999999 8999999998864
|
| >1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=125.38 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=101.8
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++....... . ..
T Consensus 47 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~---~---~~ 113 (173)
T 1alv_A 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHL---N---EH 113 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCC---C---HH
T ss_pred HHHHHHHHHHcCCCCCccCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCC---C---HH
Confidence 45677889999999999999999998854 36899999999999999999999998876542111 1 13
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
.+..+|+.+| |++|.|+.+||..++.....+..+|+.+|.|+||.|+.+ |.++|.
T Consensus 114 ~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 168 (173)
T 1alv_A 114 LYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVN-IQEWLQ 168 (173)
T ss_dssp HHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence 5677899999 999999999999998877789999999999999999866 555554
|
| >1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 | Back alignment and structure |
|---|
Probab=99.44 E-value=2e-13 Score=155.55 Aligned_cols=136 Identities=22% Similarity=0.302 Sum_probs=104.6
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc-------c
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-------E 487 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~-------~ 487 (574)
+++++++|..||.|++|+|+.+||..+|. .+|...++++++.++..+| |++|.|+|+||+..+.....+. .
T Consensus 606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~-~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~ 683 (900)
T 1qxp_A 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIE-AAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDP 683 (900)
T ss_dssp HHHHHHHHGGGCTTCCSCCBHHHHHHHHH-HTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHhhCCCCCCeECHHHHHHHHH-HhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCC
Confidence 36789999999999999999999999995 4899999999999999999 9999999999998765321000 0
Q ss_pred ----------------------------------------cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC--
Q 008197 488 ----------------------------------------HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 525 (574)
Q Consensus 488 ----------------------------------------~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 525 (574)
.........++.+|+.+|.+ +|.|+.+||+.++...+
T Consensus 684 d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~ 762 (900)
T 1qxp_A 684 ENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTR 762 (900)
T ss_dssp SCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----
T ss_pred CCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccc
Confidence 00011233566778888876 88889999999887643
Q ss_pred ------------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 526 ------------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 526 ------------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.++.+|+.+|.|+||.|+|+||+.++..
T Consensus 763 ~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~ 802 (900)
T 1qxp_A 763 HPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN 802 (900)
T ss_dssp CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence 3788999999999999999999999864
|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=152.81 Aligned_cols=127 Identities=13% Similarity=0.181 Sum_probs=96.3
Q ss_pred Hhhhhccccc--cccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcC-------CCCcceehhchHHHHhhhhc
Q 008197 414 ELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC-------NTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 414 ~~~~l~~~F~--~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~-------d~dg~I~f~EF~~~~~~~~~ 484 (574)
....|+++|. .||+|++|.|+..||..+| +. .+.+++.+++.+|. +++|.|+|+||+.++.....
T Consensus 144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l-~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~ 217 (799)
T 2zkm_X 144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMF-PA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP 217 (799)
T ss_dssp HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHS-CS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC
T ss_pred HHHHHHHHhHHhccCCCCCCeECHHHHHHHH-hh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC
Confidence 3457899999 8999999999999999988 32 36899999999985 88999999999998765321
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-C---------------cHHHHHHHhCCC----CCCcccH
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G---------------SIDPLLEEADID----KDGRISL 544 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-~---------------~~~~~~~~~D~d----~dG~i~~ 544 (574)
..+++++|+.||.|++|+|+.+||+.+|... | ++.++|+++|.| +||.|+|
T Consensus 218 ---------r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~ 288 (799)
T 2zkm_X 218 ---------RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSP 288 (799)
T ss_dssp ---------CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCH
T ss_pred ---------HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccch
Confidence 1257889999999999999999999988754 2 378899999999 8999999
Q ss_pred HHHHHHHHhcc
Q 008197 545 SEFRRLLRTAS 555 (574)
Q Consensus 545 ~EF~~~~~~~~ 555 (574)
+||+.+|....
T Consensus 289 eeF~~~L~S~~ 299 (799)
T 2zkm_X 289 EGMVWFLCGPE 299 (799)
T ss_dssp HHHHHHHHSTT
T ss_pred hhhhhcccCcc
Confidence 99999998643
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=9.4e-14 Score=113.25 Aligned_cols=72 Identities=35% Similarity=0.571 Sum_probs=67.2
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
...++++++++|+++|..||.|++|+|+.+||..+|. .+|..+++.+++.+|+.+|.|+||.|+|+||+.+|
T Consensus 27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~-~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMR-SLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHH-HHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 4567889999999999999999999999999999995 58999999999999999999999999999999865
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=7.4e-13 Score=128.79 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=110.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++...+|.|+.+.||++.. .|..+++|....... .....+.+|+.+++.|..+..++++++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~---------------~~~~~~~~E~~~l~~l~~~~~vP~v~~ 77 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK---------------GTTYDVEREKDMMLWLEGKLPVPKVLH 77 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT---------------TSTTCHHHHHHHHHHHTTTSCCCCEEE
T ss_pred cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC---------------CCHHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 588888999999999999963 367999998864210 112357899999999976788999999
Q ss_pred EEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------
Q 008197 177 AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--------------------------- 229 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--------------------------- 229 (574)
++...+..|+||||++|.+|.+.+ .+......++.++..+|..||+
T Consensus 78 ~~~~~~~~~lv~e~i~G~~l~~~~-------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 78 FERHDGWSNLLMSEADGVLCSEEY-------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp EEEETTEEEEEEECCSSEEHHHHC-------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred EEecCCceEEEEEecCCeehhhcc-------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 999999999999999999987642 1222345788899999999998
Q ss_pred --------------------------------CCCEeecCCCCcEEEccCCCCCCeEEEeecccc
Q 008197 230 --------------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262 (574)
Q Consensus 230 --------------------------------~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~ 262 (574)
..++|+|++|.|||++. ...+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~---~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD---GKVSGFIDLGRSG 212 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET---TEEEEECCCTTCE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC---CcEEEEEEchhcc
Confidence 44899999999999972 3445699999774
|
| >1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 | Back alignment and structure |
|---|
Probab=99.40 E-value=5.2e-13 Score=120.32 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=99.2
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 42 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~ 108 (167)
T 1gjy_A 42 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFR---LN---PQ 108 (167)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCC---CC---HH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---CC---HH
Confidence 45677889999999999999999998854 3689999999999999999999999877643211 11 12
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHH--HHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS--EFRRLL 551 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~--EF~~~~ 551 (574)
.+..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ +|+.++
T Consensus 109 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~~~~~l~~~ 164 (167)
T 1gjy_A 109 TVNSIAKRY--STSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCV 164 (167)
T ss_dssp HHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeEEeeHHHHHHHH
Confidence 566788888 899999999999998887789999999999999999965 555443
|
| >1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.2e-13 Score=120.03 Aligned_cols=122 Identities=14% Similarity=0.179 Sum_probs=99.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 40 ~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~ 106 (165)
T 1k94_A 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR---LS---PQ 106 (165)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCC---CC---HH
Confidence 45677889999999999999999998854 3688999999999999999999999877643211 11 12
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.+..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |.++|..
T Consensus 107 ~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~~ 161 (165)
T 1k94_A 107 TLTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFI-YDDFLQG 161 (165)
T ss_dssp HHHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEE-HHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeee-HHHHHHH
Confidence 566678888 899999999999998877788999999999999999776 6666653
|
| >2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=120.77 Aligned_cols=118 Identities=16% Similarity=0.289 Sum_probs=99.0
Q ss_pred CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-CCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCC
Q 008197 428 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDI 506 (574)
Q Consensus 428 d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d-~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~ 506 (574)
+.+|.|+.+|+..+... ++ ++..+++.+|..+|.| ++|.|+++||..++........ . ...+..+|+.+|.
T Consensus 3 ~~~~~l~~~el~~~~~~-~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~--~---~~~~~~~f~~~D~ 74 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRS-TR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGD--P---SAFAEYVFNVFDA 74 (190)
T ss_dssp CSSCCSCHHHHHHHHHH-HC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSC--H---HHHHHHHHHHHCS
T ss_pred cccccCCHHHHHHHHHh-cC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCC--c---cHHHHHHHHHhcC
Confidence 46789999999998844 44 5778999999999999 8999999999988765422111 1 2357789999999
Q ss_pred CCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 507 DRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 507 d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
|++|.|+.+||..++...+ ++..+|+.+|.|++|.|+++||..++..
T Consensus 75 d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~ 127 (190)
T 2l2e_A 75 DKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127 (190)
T ss_dssp SSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence 9999999999999887665 4888999999999999999999999876
|
| >1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.6e-13 Score=122.70 Aligned_cols=120 Identities=26% Similarity=0.332 Sum_probs=98.2
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc------cc
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 489 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~------~~ 489 (574)
..+..+|..+|.|++|.|+..||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~ 141 (190)
T 1fpw_A 63 DFANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNED 141 (190)
T ss_dssp HHHHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCC
T ss_pred HHHHHHHHHHCCCCCCcEeHHHHHHHHHH-HccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccc
Confidence 35788999999999999999999999955 677778889999999999999999999999988765321100 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCC
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI 536 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~ 536 (574)
.......+..+|+.+|.|++|.|+.+||..++.....+..+|..+|.
T Consensus 142 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~d~ 188 (190)
T 1fpw_A 142 EATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYDG 188 (190)
T ss_dssp CCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHHhhccc
Confidence 11123467889999999999999999999999988888888887763
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.4e-13 Score=111.34 Aligned_cols=107 Identities=17% Similarity=0.289 Sum_probs=74.4
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+..++.|.++|..||.| +|+|+..||+.+|.+. ++...++++++++|+.+|.|+||.|+|+||+.++.....
T Consensus 11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~--- 86 (121)
T 4drw_A 11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTI--- 86 (121)
T ss_dssp HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH---
Confidence 44578999999999998 8999999999999542 577788899999999999999999999999988764321
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCC
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKD 539 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~d 539 (574)
...+.|....+..+++... ...+.++|+++|.|||
T Consensus 87 --------~~he~f~~~~k~~~~~~~~---------d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 87 --------ACNDYFVVHMKQENLYFQG---------DSTVHEILSKLSLEGD 121 (121)
T ss_dssp --------HHHHHHTTSCC------------------CCHHHHHHHCCC---
T ss_pred --------HHHHHHHHHHHHhccCCCC---------chHHHHHHHHhcccCC
Confidence 1112455554443333322 2346777777777765
|
| >1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A | Back alignment and structure |
|---|
Probab=99.38 E-value=8.6e-13 Score=122.51 Aligned_cols=121 Identities=16% Similarity=0.197 Sum_probs=99.8
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 73 ~~~~~l~~~~D~d~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~ 139 (198)
T 1juo_A 73 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFR---LS---PQ 139 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC---CC---HH
Confidence 35677889999999999999999998854 3689999999999999999999999877643211 11 12
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccH--HHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISL--SEFRRLL 551 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~--~EF~~~~ 551 (574)
.+..+|+.+ |++|.|+.+||..++.....+..+|+.+|.|+||.|+. ++|+.++
T Consensus 140 ~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 140 AVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp HHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 566788888 89999999999999888878999999999999999987 6666654
|
| >2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=121.22 Aligned_cols=122 Identities=17% Similarity=0.242 Sum_probs=97.0
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc-c
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-D 489 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~-~ 489 (574)
+......+..+|..+|.|++|.|+..||..++.. ++...+..++..+|+.+|.|++|.|+++||..++......... .
T Consensus 47 ~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~ 125 (198)
T 2r2i_A 47 SPSANKYVEQMFETFDFNKDGYIDFMEYVAALSL-VLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125 (198)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSS
T ss_pred CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-HccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCc
Confidence 3444566889999999999999999999999955 6677788899999999999999999999999887654321100 0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHH
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 533 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 533 (574)
.......+..+|+.+|.|++|.|+.+||..++....++.+++..
T Consensus 126 ~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 169 (198)
T 2r2i_A 126 AMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTR 169 (198)
T ss_dssp CCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHHHHHhc
Confidence 00112347789999999999999999999999877667777763
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.37 E-value=2.8e-13 Score=118.70 Aligned_cols=95 Identities=18% Similarity=0.196 Sum_probs=46.8
Q ss_pred HHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----------
Q 008197 456 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---------- 525 (574)
Q Consensus 456 ~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---------- 525 (574)
..+|..+|.|+||.|+|+||+..+......... .......++.+|+.||+|++|+|+.+||+.++...+
T Consensus 30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEA-EMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccccc-ccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 356777777777777777776655432110000 001124677899999999999999999999887652
Q ss_pred ----cH----HHHHHHhCCCCCCcccHHHHHHHH
Q 008197 526 ----SI----DPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 526 ----~~----~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
++ ..+|+.+|.|+||.|+|+||+.+|
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 23 455599999999999999999876
|
| >2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-12 Score=120.78 Aligned_cols=131 Identities=20% Similarity=0.196 Sum_probs=96.0
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhh-c-ccccchHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH-Q-LEEHDSEKWH 494 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~-~-~~~~~~~~~~ 494 (574)
.+.++|..+|.|++|.|+..||..++..........+.+..+|+.+|.|++|.|+++||..++.... . .......+..
T Consensus 75 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~ 154 (207)
T 2ehb_A 75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIE 154 (207)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHH
Confidence 4567899999999999999999999955333445678899999999999999999999998775321 1 1111222334
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFR 548 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~ 548 (574)
..+..+|+.+|.|++|.|+.+||..++.....+...+.. ..-+|..++|.+|+
T Consensus 155 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~ 207 (207)
T 2ehb_A 155 VMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTL-PYLKDINRTFPSFV 207 (207)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHCGGGGGGGCC-TTTTSTTTC-----
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhcc-hhhhhhhhcCcCcC
Confidence 456789999999999999999999988876655444432 33568899999986
|
| >1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-12 Score=119.38 Aligned_cols=119 Identities=19% Similarity=0.242 Sum_probs=94.4
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc------cc
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 489 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~------~~ 489 (574)
..+..+|..+|.|++|.|+.+||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 56 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~ 134 (183)
T 1s6c_A 56 TYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK 134 (183)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHH-HcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCcc
Confidence 45677899999999999999999999954 555667889999999999999999999999988765421000 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhC
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 535 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 535 (574)
.......+..+|+.+|.|++|.|+.+||..++.....+...|..+|
T Consensus 135 ~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~l~~~d 180 (183)
T 1s6c_A 135 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLFQ 180 (183)
T ss_dssp ---CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcChHHHHHHHHhh
Confidence 1111246788999999999999999999999988777777777665
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-12 Score=114.84 Aligned_cols=89 Identities=12% Similarity=0.263 Sum_probs=70.8
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.++.++++++|..||.|++|+|+.+||..+|. .+|..+++.+++.+|..+|.|++|.|+|+||+.++... .
T Consensus 46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~----- 116 (150)
T 2jjz_A 46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMME-KLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK---R----- 116 (150)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS---S-----
T ss_pred HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHH-HcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh---H-----
Confidence 46788999999999999999999999999995 58999999999999999999999999999999877543 1
Q ss_pred HHHHHHHHHHHhcCCCCCCcc
Q 008197 492 KWHLRSQAAFEKFDIDRDGFI 512 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I 512 (574)
..+..+|+.||.|++|.-
T Consensus 117 ---~~i~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 117 ---SAVLKLVMMFEGKANESS 134 (150)
T ss_dssp ---CCHHHHHHC---------
T ss_pred ---HHHHHHHHHHcCCCCCCC
Confidence 146679999999999984
|
| >2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-12 Score=102.46 Aligned_cols=75 Identities=27% Similarity=0.444 Sum_probs=65.1
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
|+..+++++.++++++|..+|.|++|+|+.+||..++. .+| .++..+++.+|..+|.|++|.|+|+||+..+...
T Consensus 1 m~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALK-TLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp -----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-TTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred CCccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-HcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 34567888999999999999999999999999999995 488 8999999999999999999999999999877543
|
| >1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-12 Score=114.88 Aligned_cols=89 Identities=11% Similarity=0.251 Sum_probs=74.7
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.+++++++++|..||.|++|+|+.+||..++. .+|..++..++..+|..+|.|++|.|+|+||+.++... .
T Consensus 44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~-~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~----- 114 (147)
T 1wy9_A 44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLE-KLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK---R----- 114 (147)
T ss_dssp HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS---G-----
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh---H-----
Confidence 57888999999999999999999999999995 58999999999999999999999999999999877532 1
Q ss_pred HHHHHHHHHHHhcCCCCCCcc
Q 008197 492 KWHLRSQAAFEKFDIDRDGFI 512 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I 512 (574)
..+..+|+.||.|++|..
T Consensus 115 ---~~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 115 ---SAILRMILMYEEKNKEHK 132 (147)
T ss_dssp ---GGGGGGGGGCCCC-----
T ss_pred ---HHHHHHHHHHccCCCCCC
Confidence 135569999999999984
|
| >3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.7e-12 Score=122.06 Aligned_cols=120 Identities=19% Similarity=0.256 Sum_probs=95.4
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc------c
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------D 489 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~------~ 489 (574)
..+..+|..+|.|++|.|+.+||..++.. +......+.+..+|+.+|.|++|.|+++||..++......... .
T Consensus 102 ~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~ 180 (229)
T 3dd4_A 102 TYAHFLFNAFDTDHNGAVSFEDFIKGLSI-LLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLK 180 (229)
T ss_dssp HHHHHHHHTTCSSCCSSCCHHHHHHHHHH-HHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHcCCCCCCeEeHHHHHHHHHH-HcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcc
Confidence 34677899999999999999999999955 4455667899999999999999999999999887654211000 0
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCC
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI 536 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~ 536 (574)
.......+..+|+.+|.|+||.|+.+||..++.....+..+|..+|.
T Consensus 181 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~D~ 227 (229)
T 3dd4_A 181 EDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFEN 227 (229)
T ss_dssp ---CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCHHHHHHHHhccc
Confidence 00011357789999999999999999999999988888888888874
|
| >2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.3e-12 Score=123.72 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=96.5
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc------cc
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 489 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~------~~ 489 (574)
..+..+|..+|.|++|.|+.+||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 129 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~ 207 (256)
T 2jul_A 129 TYAHFLFNAFDADGNGAIHFEDFVVGLSI-LLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILR 207 (256)
T ss_dssp HHHHHHHHHSSCSCCSEECSHHHHHHHHH-HHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSC
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHH-HhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccc
Confidence 46788999999999999999999999955 566677889999999999999999999999988765421100 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhC
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 535 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 535 (574)
.......+..+|+.+|.|+||.|+.+||..++.....+.+.|..+|
T Consensus 208 ~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~l~~~l~~~d 253 (256)
T 2jul_A 208 EDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFE 253 (256)
T ss_dssp CCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSSHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHHHHHHHHhhc
Confidence 0112346788999999999999999999999988877888777665
|
| >1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.28 E-value=8.4e-12 Score=116.32 Aligned_cols=118 Identities=16% Similarity=0.148 Sum_probs=95.5
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc----c--
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE----H-- 488 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~----~-- 488 (574)
...+..+|..+|.|++|.|+.+||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++........ .
T Consensus 58 ~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~ 136 (204)
T 1jba_A 58 TQYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVE 136 (204)
T ss_dssp HHHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTT
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-HccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCcccc
Confidence 356778899999999999999999999955 566677889999999999999999999999988765421100 0
Q ss_pred -----chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHH
Q 008197 489 -----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 533 (574)
Q Consensus 489 -----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 533 (574)
........+..+|+.+|.|++|.|+.+||..++....++.+++..
T Consensus 137 ~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~ 186 (204)
T 1jba_A 137 AEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQM 186 (204)
T ss_dssp SSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHHS
T ss_pred ccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcChHHHHHHHh
Confidence 000123467889999999999999999999999988888888773
|
| >2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A | Back alignment and structure |
|---|
Probab=99.28 E-value=4.2e-13 Score=114.04 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=50.3
Q ss_pred hhCCCCccHHHHHHHHHhhcCCCCcceehhchHH-----HHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHH
Q 008197 444 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 518 (574)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~-----~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~ 518 (574)
+.+|.++++.++..++..+ +|.|+|+||+. ++..... ... ....++.+|+.|| |+|+.+||+
T Consensus 3 r~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~--~~~---~~~~l~~aF~~fD----G~I~~~El~ 69 (123)
T 2kld_A 3 TAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKL--KKN---TVDDISESLRQGG----GKLNFDELR 69 (123)
T ss_dssp ---------------------------------------------------------CCSCSSTTTT----TCEEHHHHH
T ss_pred hhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhc--Chh---HHHHHHHHHHHhC----CCCCHHHHH
Confidence 4589999999999999876 88999999998 4432211 111 1235677999998 999999999
Q ss_pred HhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 519 MHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 519 ~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
.++..+| ++.++|+.+|.|+||.|+|+||+.+|....
T Consensus 70 ~~l~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 70 QDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp HHTTTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred HHHHHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 9998887 488999999999999999999999986544
|
| >1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.4e-12 Score=118.42 Aligned_cols=119 Identities=21% Similarity=0.233 Sum_probs=93.3
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc------cc
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD 489 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~------~~ 489 (574)
..+..+|..+|.|++|.|+.+||..++.. ++...+.+++..+|+.+|.|++|.|+++||..++........ ..
T Consensus 63 ~~~~~~f~~~D~d~~g~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~ 141 (190)
T 1g8i_A 63 KFATFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEE 141 (190)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGG
T ss_pred HHHHHHHHHHhcCCCCeEeHHHHHHHHHH-hcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccc
Confidence 35788999999999999999999999854 555677889999999999999999999999988765311000 00
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhC
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 535 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 535 (574)
.......+..+|+.+|.|++|.|+.+||..++.....+...+..+|
T Consensus 142 ~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~~~~~~~~~~~ 187 (190)
T 1g8i_A 142 ENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 187 (190)
T ss_dssp GSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCCBT
T ss_pred cccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhChHHHHHHhhhc
Confidence 0112346888999999999999999999999877665666655443
|
| >1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=115.78 Aligned_cols=131 Identities=14% Similarity=0.187 Sum_probs=97.4
Q ss_pred HhhhhccccccccC-CCCCCcCHHHHHHHHHhh-------CCCCc-----cHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 414 ELADLRDQFDAIDV-DKNGSISLEEMRQALAKD-------LPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 414 ~~~~l~~~F~~~D~-d~~G~i~~~El~~~l~~~-------~~~~~-----~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.+..+.++|+...- .++..|+..++...|... .+... ....+..+|+.||.|++|.|+|.||+.++.
T Consensus 80 ~l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs 159 (261)
T 1eg3_A 80 SLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGII 159 (261)
T ss_dssp CHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHH
T ss_pred eHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHH
Confidence 34555666666543 356789999988876442 12111 134567799999999999999999998877
Q ss_pred hhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcc-------cC------------cHHHHHHHhCCCCCCc
Q 008197 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-------KG------------SIDPLLEEADIDKDGR 541 (574)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-------~~------------~~~~~~~~~D~d~dG~ 541 (574)
....... .++++.+|+++| |++|+|+.+||..++.. .| .++.+|+.+| +||.
T Consensus 160 ~l~rG~l------eeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~ 230 (261)
T 1eg3_A 160 SLCKAHL------EDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPE 230 (261)
T ss_dssp HTSSSCH------HHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSC
T ss_pred HHcCCCH------HHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCc
Confidence 6543222 347888999999 99999999999987743 12 1788999996 8999
Q ss_pred ccHHHHHHHHHh
Q 008197 542 ISLSEFRRLLRT 553 (574)
Q Consensus 542 i~~~EF~~~~~~ 553 (574)
|+++||++.++.
T Consensus 231 It~~EFl~~~~~ 242 (261)
T 1eg3_A 231 IEAALFLDWMRL 242 (261)
T ss_dssp BCHHHHHHHHHT
T ss_pred CCHHHHHHHHHh
Confidence 999999999874
|
| >2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.3e-12 Score=102.83 Aligned_cols=59 Identities=32% Similarity=0.571 Sum_probs=54.5
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..+++++|+.||+|++|+|+.+||+.++..+| +++.+|+.+|.|+||.|+|+||+.+|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 45788999999999999999999999998776 599999999999999999999999874
|
| >1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.25 E-value=5.6e-12 Score=119.46 Aligned_cols=118 Identities=19% Similarity=0.249 Sum_probs=92.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc-----cc-cc
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL-----EE-HD 489 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~-----~~-~~ 489 (574)
..+..+|..+|.|++|.|+.+||..++.. ++.....+++..+|+.+|.|++|.|+++||..++...... .. ..
T Consensus 89 ~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~ 167 (224)
T 1s1e_A 89 TYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK 167 (224)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGC
T ss_pred HHHHHHHHHhcCCCCCcEeHHHHHHHHHH-HccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCC
Confidence 46677899999999999999999999955 4555678899999999999999999999999887653110 00 01
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHh
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA 534 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~ 534 (574)
.......+..+|+.+|.|++|.|+.+||..++.....+...|...
T Consensus 168 ~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~l~~~l~~~ 212 (224)
T 1s1e_A 168 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLF 212 (224)
T ss_dssp SSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhcCC
Confidence 111234678899999999999999999999998776666666544
|
| >3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C | Back alignment and structure |
|---|
Probab=99.24 E-value=5.1e-12 Score=110.61 Aligned_cols=105 Identities=19% Similarity=0.169 Sum_probs=51.7
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc------c
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------E 486 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~------~ 486 (574)
.-...|..+|.|++|.|+.+||..++...+. .....+++..+|+.+|.|++|.|+++||..++...... .
T Consensus 28 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~ 107 (143)
T 3a4u_B 28 ASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAP 107 (143)
T ss_dssp -----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC------------
T ss_pred CCHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCC
Confidence 3456899999999999999999998855322 12345788999999999999999999999876543210 1
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhh
Q 008197 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 521 (574)
Q Consensus 487 ~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 521 (574)
.....+....+..+|+.+|.|+||.|+.+||..++
T Consensus 108 ~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 108 LMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp -CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 11222333445778999999999999999998764
|
| >2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.4e-11 Score=98.96 Aligned_cols=89 Identities=28% Similarity=0.465 Sum_probs=72.2
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
.+.+..++++++|..||.|++|+|+.+||..++. .+|..++..++..+|..+|.|++|.|+|+||+.++.........
T Consensus 3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~- 80 (92)
T 2kn2_A 3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMI-NLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGG- 80 (92)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCC-
T ss_pred CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCC-
Confidence 4566788999999999999999999999999995 58999999999999999999999999999999887654322111
Q ss_pred hHHHHHHHHHHHH
Q 008197 490 SEKWHLRSQAAFE 502 (574)
Q Consensus 490 ~~~~~~~~~~~F~ 502 (574)
. ....++.||+
T Consensus 81 -~-~~~~l~~aF~ 91 (92)
T 2kn2_A 81 -N-GWSRLRRKFS 91 (92)
T ss_dssp -H-HHHHHHHHHT
T ss_pred -c-hHHHHHHHhc
Confidence 1 1235666764
|
| >2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A | Back alignment and structure |
|---|
Probab=99.23 E-value=4.4e-12 Score=120.39 Aligned_cols=133 Identities=20% Similarity=0.158 Sum_probs=93.1
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhh--cccccchHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH--QLEEHDSEKWH 494 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~--~~~~~~~~~~~ 494 (574)
.+.++|..+|.|++|.|+.+||..++..........+.+..+|+.+|.|++|.|+++||..++.... ........+..
T Consensus 86 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~ 165 (226)
T 2zfd_A 86 FADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIE 165 (226)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHH
Confidence 4566899999999999999999999965333445678899999999999999999999998875321 11112223334
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 550 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~ 550 (574)
..+..+|+.+|.|++|.|+.+||..++.....+...+.. ..-++..++|.+|+..
T Consensus 166 ~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~ 220 (226)
T 2zfd_A 166 DIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTL-QYLKDITTTFPSFVFH 220 (226)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHHSGGGGGGGCC-GGGGGHHHHC------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhch-HHhhchhhcchhHHhh
Confidence 456789999999999999999999988766543333321 1233455666666643
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=118.22 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=98.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC-cceEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN-VVKFY 175 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn-iv~~~ 175 (574)
.|.+....+.|..+.||++. ..+|..+++|..... ....+..|+.+++.|..+.- +++++
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~------------------~~~~~~~E~~~l~~l~~~~~~vP~~~ 81 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSG------------------ALNELQDEAARLSWLATTGVPCAAVL 81 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSC------------------TTSCHHHHHHHHHHHHTTTCCBCCEE
T ss_pred CCceEecccCCCCceEEEEe-cCCCCeEEEEeCCcc------------------cchhhhHHHHHHHHHHhCCCCCCeEE
Confidence 45665555567779999996 356778999986542 11346789999999965522 66799
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC------------------------
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG------------------------ 231 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~------------------------ 231 (574)
.++..++..++||||++|.+|. . .... ...++.++...|..||+..
T Consensus 82 ~~~~~~~~~~~v~e~i~G~~l~--~-----~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T 1nd4_A 82 DVVTEAGRDWLLLGEVPGQDLL--S-----SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAG 151 (264)
T ss_dssp EEEECSSCEEEEEECCSSEETT--T-----SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTT
T ss_pred EeccCCCCCEEEEEecCCcccC--c-----CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcC
Confidence 9888888899999999998873 2 1112 2356677777777777643
Q ss_pred ----------------------------------CEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 232 ----------------------------------LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 232 ----------------------------------iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
++|+|++|.|||++. +..+.|+|||.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~---~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 152 LVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVEN---GRFSGFIDCGRLGV 214 (264)
T ss_dssp CCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEET---TEEEEECCCTTCEE
T ss_pred CccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEEC---CcEEEEEcchhccc
Confidence 999999999999973 44556999998753
|
| >1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.2e-11 Score=109.20 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=81.5
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCcc-------HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~-------~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
+..+|..+|.|++|.|+.+||..++......... ...+..+|+.+|.|++|.|+++||..++.... ..
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~~---- 134 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-MS---- 134 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-CC----
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-CC----
Confidence 3489999999999999999999998663333322 36789999999999999999999998776542 11
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
...+..+|+.+|.|++|.|+.+||..++....
T Consensus 135 ---~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~ 166 (176)
T 1nya_A 135 ---KAEAAEAFNQVDTNGNGELSLDELLTAVRDFH 166 (176)
T ss_dssp ---HHHHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred ---HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence 23577899999999999999999999887554
|
| >3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L | Back alignment and structure |
|---|
Probab=99.22 E-value=1.2e-11 Score=136.64 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=106.3
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+++..+|..+|.|++|.|+.+||..++... .++..+|+.+|.|++|.|+.+||..++....... . ..
T Consensus 575 ~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~l---s---~~ 641 (714)
T 3bow_A 575 ETCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL---P---CQ 641 (714)
T ss_dssp HHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEEC---C---HH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCC---C---HH
Confidence 356778899999999999999999998552 6899999999999999999999998776432111 1 13
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
.+..+|+.+| |++|.|+.+||..++.....+..+|+.+|.|+||.|+++|+..++....
T Consensus 642 ~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~el~~l~~~~~ 700 (714)
T 3bow_A 642 LHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVL 700 (714)
T ss_dssp HHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHSSSCSSCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEHHHHHHHHHHHH
Confidence 6778999999 9999999999999988777889999999999999999999887776433
|
| >3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-11 Score=107.17 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=61.7
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~ 497 (574)
.+++|..+|.|++|.|+.+||..++...+.......++..+|+.+|.|++|.|+.+||..++..... .... ...+
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-~~~~----~~e~ 79 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI-EGMS----KEDA 79 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC-CCCC----HHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC-CCCC----HHHH
Confidence 4678999999999999999999988553444445678999999999999999999999987764321 0111 2357
Q ss_pred HHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 498 QAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 498 ~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
..+|+.+|.|++|.|+.+||..++....
T Consensus 80 ~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 80 QGMVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 7899999999999999999998886553
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-11 Score=100.42 Aligned_cols=69 Identities=23% Similarity=0.364 Sum_probs=61.3
Q ss_pred HHhhhhcccccccc-CCCC-CCcCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~-G~i~~~El~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+.+|+++|..|| +|++ |+|+.+||+.+|...+ |..+++++++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~ 81 (101)
T 3nso_A 7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC 81 (101)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 45788999999998 8997 9999999999996534 67788999999999999999999999999987754
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=99.19 E-value=2e-11 Score=97.60 Aligned_cols=75 Identities=25% Similarity=0.461 Sum_probs=68.3
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
++..++++++.+++++|..||.|++|+|+.+||..++. .+|..++..++..+|..+|.|++|.|+|+||+..+..
T Consensus 10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 44467888999999999999999999999999999995 4899999999999999999999999999999987653
|
| >1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A | Back alignment and structure |
|---|
Probab=99.18 E-value=5.4e-11 Score=102.13 Aligned_cols=94 Identities=23% Similarity=0.366 Sum_probs=78.0
Q ss_pred HHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcc---cC------
Q 008197 455 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL---KG------ 525 (574)
Q Consensus 455 ~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~---~~------ 525 (574)
++.+|..+|.|++|.|+++||..++..... ... ...+..+|+.+|.|++|.|+.+||..++.. ..
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~---~~~---~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~ 75 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA---IKN---EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCC---SSH---HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCC---CCC---HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHH
Confidence 678999999999999999999987764321 111 236778999999999999999999998852 11
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 526 SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 526 ~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
++..+|+.+|.|++|.|+++||..++...
T Consensus 76 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~ 104 (134)
T 1jfj_A 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCccCHHHHHHHHHHh
Confidence 37889999999999999999999999753
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-11 Score=94.36 Aligned_cols=71 Identities=27% Similarity=0.606 Sum_probs=64.9
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++++.++++++|..+|.|++|+|+.+||..++.. +|..++..++..+|..+|.|++|.|+|+||+.++..
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 35678899999999999999999999999999954 799999999999999999999999999999987653
|
| >1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-11 Score=95.78 Aligned_cols=74 Identities=14% Similarity=0.169 Sum_probs=67.5
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHH---HHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~---~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+...++++++.+++++|..||.|++|+|+..||..++. .+|..++..+ +..+|..+|.|++|.|+| ||+.++..
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 4 KARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLT-KLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHH-HTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 45667888999999999999999999999999999995 5899999999 999999999999999999 99987653
|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.7e-11 Score=131.96 Aligned_cols=125 Identities=15% Similarity=0.223 Sum_probs=105.9
Q ss_pred hhhhcccccc--ccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-------CCcceehhchHHHHhhhhcc
Q 008197 415 LADLRDQFDA--IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-------TDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 415 ~~~l~~~F~~--~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d-------~dg~I~f~EF~~~~~~~~~~ 485 (574)
...|+++|.. +|+|+||.|+..|+...|.. ...++..+|+.+|.+ ++|.|+|+||+.++.....
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~- 221 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL- 221 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC-
Confidence 3567888988 89999999999999998832 467899999999987 8899999999988764321
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-c---------------HHHHHHHhCCC----CCCcccHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-S---------------IDPLLEEADID----KDGRISLS 545 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-~---------------~~~~~~~~D~d----~dG~i~~~ 545 (574)
. .+++.+|+.||.+++|+|+.+||+.+|...+ + +.++|+.+|.+ ++|.|+++
T Consensus 222 --R------~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~Lsld 293 (885)
T 3ohm_B 222 --R------PDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSME 293 (885)
T ss_dssp --C------HHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHH
T ss_pred --H------HHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchh
Confidence 1 2578899999999999999999999887543 2 78899999999 79999999
Q ss_pred HHHHHHHhc
Q 008197 546 EFRRLLRTA 554 (574)
Q Consensus 546 EF~~~~~~~ 554 (574)
+|..+|...
T Consensus 294 gF~~yL~S~ 302 (885)
T 3ohm_B 294 GFSRYLGGE 302 (885)
T ss_dssp HHHHHHTST
T ss_pred hhhhhccCc
Confidence 999999754
|
| >3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=102.72 Aligned_cols=108 Identities=19% Similarity=0.182 Sum_probs=84.1
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
.+..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... .....+....
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-~~~~~~~~~~ 117 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQI 117 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-GSCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-CCCHHHHHHH
Confidence 566789999999999999999999996543444567899999999999999999999999887652111 1122223334
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
+..+|..+|.|++|.|+.+||..++...+
T Consensus 118 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 118 VDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 55566669999999999999999887665
|
| >2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.15 E-value=3.3e-11 Score=109.99 Aligned_cols=95 Identities=18% Similarity=0.211 Sum_probs=77.3
Q ss_pred cccccccCCCCCCcCHHHHHHHHHhhCCC--------CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 420 DQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 420 ~~F~~~D~d~~G~i~~~El~~~l~~~~~~--------~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.+|..+|.|++|.|+.+||..++...... ......+..+|+.+|.|++|.|+++||..++.... ...
T Consensus 64 ~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g-~~~---- 138 (185)
T 2sas_A 64 DLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ-LQC---- 138 (185)
T ss_dssp HHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC-CCC----
T ss_pred HHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC-CCH----
Confidence 56999999999999999999998654222 22457899999999999999999999998775432 211
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
..+..+|+.+|.|++|.|+.+||..++.
T Consensus 139 ---~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 166 (185)
T 2sas_A 139 ---ADVPAVYNVITDGGKVTFDLNRYKELYY 166 (185)
T ss_dssp ---SSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred ---HHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence 1466799999999999999999998764
|
| >2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3.7e-11 Score=105.11 Aligned_cols=100 Identities=14% Similarity=0.270 Sum_probs=78.7
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++..+|..+|.|++|.|+.+||..++........+..++..+|+.+|.|++|.|+.+||..++...... .. ...
T Consensus 43 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~~ 116 (143)
T 2obh_A 43 EIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN---LT---DEE 116 (143)
T ss_dssp HHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC---CC---HHH
T ss_pred HHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---CC---HHH
Confidence 456678889999999999999998885433222345688999999999999999999999877543211 11 135
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 117 ~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 117 LQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 77799999999999999999988764
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=4.4e-11 Score=96.53 Aligned_cols=70 Identities=23% Similarity=0.234 Sum_probs=62.8
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
+++++.++++++|..||+|++|+|+.+||..++.. +| .+..+++.+++.+|.|+||.|+|+||+.++...
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 56788899999999999999999999999999954 55 568899999999999999999999999877543
|
| >1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4.9e-11 Score=99.61 Aligned_cols=87 Identities=20% Similarity=0.327 Sum_probs=63.0
Q ss_pred HHhhhhccccccccC-CCCC-CcCHHHHHHHHHhhCCCC-----ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 413 EELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~-d~~G-~i~~~El~~~l~~~~~~~-----~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
+++.+|+++|..||. |++| +|+.+||..+|...+|.. .++.+++.+|+.+|.|+||.|+|+||+.++....
T Consensus 9 ~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~-- 86 (113)
T 1xk4_C 9 RNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT-- 86 (113)
T ss_dssp HHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH--
Confidence 456789999999995 9999 999999999996457742 5789999999999999999999999998775432
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCc
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGF 511 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~ 511 (574)
......|...| +++|.
T Consensus 87 ---------~~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 87 ---------WASHEKMHEGD-EGPGH 102 (113)
T ss_dssp ---------HHHHC------------
T ss_pred ---------HHHHHHHhhCC-CCCcc
Confidence 12344788888 88875
|
| >3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1e-10 Score=96.95 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=79.0
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++.+ ++.++|..+| ++|.|+.+||..++.. ......++..+|+.+|.|++|.|+.+||..++........
T Consensus 5 ~~~~~~---ei~~~~~~~D--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~ 76 (109)
T 3fs7_A 5 DILSAK---DIESALSSCQ--AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR 76 (109)
T ss_dssp GTSCHH---HHHHHHHHTC--STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSC
T ss_pred CcCCHH---HHHHHHHhcC--CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccc
Confidence 344544 4566677777 7999999999999832 3456789999999999999999999999876654310011
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
... ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~~~---~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 77 VLT---SAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCC---HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 111 23577899999999999999999998775
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.7e-11 Score=96.39 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=62.8
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
+++++.++++++|..||+|++|+|+.+||..++.. +| .+.+++..+++.+|.|+||.|+|+||+.++...
T Consensus 3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 56788899999999999999999999999999965 55 568899999999999999999999999877543
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=5.4e-11 Score=97.18 Aligned_cols=70 Identities=20% Similarity=0.393 Sum_probs=60.3
Q ss_pred hHHhhhhcccccccc-CCCC-CCcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 412 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D-~d~~-G~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+..+++|+++|..|| .|++ |+|+.+||..+|...+| ...++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~ 84 (104)
T 3zwh_A 9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS 84 (104)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence 356789999999998 7785 89999999999965454 4567899999999999999999999999987754
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=5.5e-11 Score=95.30 Aligned_cols=69 Identities=20% Similarity=0.380 Sum_probs=58.8
Q ss_pred HHhhhhcccccccc-CCCC-CCcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~-G~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+++|+++|..|| .|++ |+|+.+||+.++...+| ...++.+++++++.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~ 81 (93)
T 4eto_A 7 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 45789999999998 6885 89999999999965455 3457899999999999999999999999987754
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.9e-11 Score=99.39 Aligned_cols=71 Identities=18% Similarity=0.339 Sum_probs=62.1
Q ss_pred chHHhhhhcccccccc-CCCCC-CcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 411 DDEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
...++++|+++|..|| .|++| +|+.+||..+|... +|..+++++++.+++.+|.|+||.|+|+||+.++..
T Consensus 17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 3456789999999999 89997 99999999999543 556778899999999999999999999999987653
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.2e-10 Score=116.73 Aligned_cols=142 Identities=25% Similarity=0.401 Sum_probs=104.8
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEec--cchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcC-CCCcceEEEE
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIE--KNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAG-HENVVKFYNA 177 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~-hpniv~~~~~ 177 (574)
.+.|+.|.++.||++.. .+..+++|+.. .... ......+.+|+.+++.|.. +..+++++.+
T Consensus 43 ~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~--------------~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~ 106 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKL--------------LPSAHAIEREYRVMDALAGTDVPVAKMYAL 106 (359)
T ss_dssp EEECCC-CCSCEEEEEC--SSCEEEEECCCC------------------------CHHHHHHHHHHHTTSSSCCCCEEEE
T ss_pred EEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCC--------------CCcHHHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence 46689999999999974 34688899876 3210 0123467889999999963 3558899998
Q ss_pred EEcC---CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------
Q 008197 178 FEDD---NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL------------------------- 229 (574)
Q Consensus 178 ~~~~---~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~------------------------- 229 (574)
+.+. +..|+||||++|..+.+.. -..++......++.+++.+|..||.
T Consensus 107 ~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (359)
T 3dxp_A 107 CEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERW 182 (359)
T ss_dssp ECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHH
T ss_pred CCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHH
Confidence 8776 5589999999998774421 2347888889999999999999997
Q ss_pred ---------------------------------CCCEeecCCCCcEEEccCCCCCCeEEEeeccccc
Q 008197 230 ---------------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263 (574)
Q Consensus 230 ---------------------------------~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~ 263 (574)
..++|+|++|.|||++..+ ...+.|+||+.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~-~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 183 TKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE-PRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS-SCEEEECCCTTCEE
T ss_pred HHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC-CcEEEEECcccccc
Confidence 3589999999999998421 12368999998864
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.12 E-value=9.7e-11 Score=116.40 Aligned_cols=181 Identities=17% Similarity=0.245 Sum_probs=124.2
Q ss_pred ccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC--cceEEEEEE
Q 008197 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN--VVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn--iv~~~~~~~ 179 (574)
+.++.|....||++. ..+++|+.... .....+.+|+.+|+.|..+.. +++++....
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----------------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~ 83 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-----------------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGM 83 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESSH-----------------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECC
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCCc-----------------chHHHHHHHHHHHHHHHhcCCCCCCceEeecC
Confidence 458999999999873 46888975432 234578899999999854433 455555544
Q ss_pred cCC---EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------
Q 008197 180 DDN---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--------------------------- 229 (574)
Q Consensus 180 ~~~---~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--------------------------- 229 (574)
..+ ..|+||++++|.+|.+... ..++..+...++.++...|..||+
T Consensus 84 ~~~~~~~~~~vm~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
T 3sg8_A 84 PSETYQMSFAGFTKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKK 159 (304)
T ss_dssp CCSSCSCSCEEEECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcceEEEcccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHH
Confidence 433 4589999999998875432 347788888889999999988886
Q ss_pred -------------------------------CCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCCccccccCcc
Q 008197 230 -------------------------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 278 (574)
Q Consensus 230 -------------------------------~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~ 278 (574)
..++|+|++|.||+++.. ....+.|+||+.+....+.. .......
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~---Dl~~~~~ 235 (304)
T 3sg8_A 160 LLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDN---DFISLME 235 (304)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTH---HHHTTCC
T ss_pred HhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHH---HHHHHHh
Confidence 136999999999999841 13467899999886543211 1111111
Q ss_pred c---cchHhhh---cCCCC------------CcchHhHHHHHHHHHhCCCCC
Q 008197 279 Y---VAPEVLK---RKSGP------------ESDVWSIGVITYILLCGRRPF 312 (574)
Q Consensus 279 y---~aPE~~~---~~~~~------------~~DvwSlG~il~elltg~~Pf 312 (574)
+ .+|+... ..|+. ..+.|++|.++|.+.+|..+|
T Consensus 236 ~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 236 DDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 3444321 11211 158999999999999999887
|
| >3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.5e-10 Score=104.87 Aligned_cols=103 Identities=23% Similarity=0.347 Sum_probs=81.9
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc-----chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 450 ~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~-----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
....++..+|..+|.|++|.|+++||..++......... ........+..+|+.+|.|++|.|+.+||..++...
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~ 116 (191)
T 3khe_A 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDK 116 (191)
T ss_dssp TTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh
Confidence 345689999999999999999999999877654111100 111123467889999999999999999999887544
Q ss_pred C------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 525 G------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 525 ~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
. .+..+|+.+|.|+||.|+++||..++.
T Consensus 117 ~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~ 150 (191)
T 3khe_A 117 QLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG 150 (191)
T ss_dssp HHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred cccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence 2 488899999999999999999999987
|
| >3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A | Back alignment and structure |
|---|
Probab=99.11 E-value=5.4e-11 Score=96.50 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=54.0
Q ss_pred HHHHHHHHHhcC-CCCC-CcccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 494 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
...++++|+.|| +||+ |+|+.+||+.++.. +| +++++|+.+|.|+||.|+|+||+.+|....
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~ 83 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC 83 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 357889999997 8997 99999999999874 23 489999999999999999999999997633
|
| >1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... | Back alignment and structure |
|---|
Probab=99.11 E-value=7.3e-11 Score=105.14 Aligned_cols=101 Identities=18% Similarity=0.289 Sum_probs=80.4
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCC---CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP---WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~---~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
++..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+.+||..++..... ...
T Consensus 56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~---~~~--- 129 (161)
T 1dtl_A 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE---TIT--- 129 (161)
T ss_dssp HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-----CCC---
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCC---
Confidence 4667899999999999999999999866443 3455678999999999999999999999876643211 111
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~ 523 (574)
...+..+|+.+|.|++|.|+.+||..++..
T Consensus 130 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp HHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 235778999999999999999999988754
|
| >3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.1e-10 Score=104.45 Aligned_cols=94 Identities=21% Similarity=0.247 Sum_probs=79.9
Q ss_pred HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc-----Cc
Q 008197 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-----GS 526 (574)
Q Consensus 452 ~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~-----~~ 526 (574)
..++..+|..+|.|++|.|+++||..++..... . ...+..+|+.+|.|++|.|+.+||..++... ..
T Consensus 38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~-~-------~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~ 109 (180)
T 3mse_B 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGI-K-------KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTF 109 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC-C-------HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CH
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC-C-------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHH
Confidence 357889999999999999999999988764421 1 1357789999999999999999999877654 24
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 527 IDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 527 ~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+..+|+.+|.|++|.|+.+||..++.+
T Consensus 110 ~~~~F~~~D~d~~G~I~~~El~~~l~~ 136 (180)
T 3mse_B 110 LKAAFNKIDKDEDGYISKSDIVSLVHD 136 (180)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHTTT
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHcC
Confidence 889999999999999999999999973
|
| >2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.4e-10 Score=101.97 Aligned_cols=101 Identities=21% Similarity=0.315 Sum_probs=82.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.+++|.|+..||..++........+.+.+..+|+.+|.|++|.|+.+||..++....... . ..
T Consensus 46 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~---~---~~ 119 (148)
T 2lmt_A 46 AELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKV---T---DE 119 (148)
T ss_dssp HHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCC---C---HH
T ss_pred HHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccc---c---HH
Confidence 34667788899999999999999998866566667788899999999999999999999988775432211 1 23
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+|.|+||.|+.+||..++.
T Consensus 120 e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 120 EIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp HHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 577799999999999999999998775
|
| >5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=95.49 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=76.2
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++.++|..+|. +|.|+.+||..++.. ......++..+|+.+|.|++|.|+++||..++........... ...
T Consensus 10 ei~~~~~~~d~--~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~---~~~ 81 (109)
T 5pal_A 10 DINKAISAFKD--PGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN---DTE 81 (109)
T ss_dssp HHHHHHHHTCS--TTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC---HHH
T ss_pred HHHHHHHHhCC--CCcCcHHHHHHHHhh---ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCC---HHH
Confidence 45667777776 899999999998832 3456789999999999999999999999987764311011111 235
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 82 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 82 TKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 77899999999999999999998775
|
| >3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A | Back alignment and structure |
|---|
Probab=99.11 E-value=6.6e-11 Score=106.38 Aligned_cols=102 Identities=15% Similarity=0.227 Sum_probs=81.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... -. ..
T Consensus 64 ~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~ 137 (169)
T 3qrx_A 64 EEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGEN---LT---EE 137 (169)
T ss_dssp HHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---CC---HH
Confidence 4567779999999999999999999986543333446788999999999999999999999877643211 11 13
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~ 523 (574)
.+..+|+.+|.|++|.|+.+||..++..
T Consensus 138 ~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 138 ELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 5778999999999999999999988864
|
| >2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=8.1e-11 Score=97.82 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=64.1
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
.+++++.++++++|..||.|++|+|+.+||..++. +...+.+++..+|+.+|.|+||.|+|+||+.++...
T Consensus 7 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 7 AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp SSCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 46778889999999999999999999999999994 567788999999999999999999999999877543
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.9e-11 Score=96.91 Aligned_cols=79 Identities=30% Similarity=0.397 Sum_probs=63.1
Q ss_pred CCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCC
Q 008197 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDK 538 (574)
Q Consensus 465 d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~ 538 (574)
|++|.|+|+|++ +.. .+..... ..++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+
T Consensus 1 ~~~G~i~~~e~~--~~~--~l~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~ 72 (87)
T 1s6j_A 1 HSSGHIDDDDKH--MAE--RLSEEEI----GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72 (87)
T ss_dssp CCSSSSSSHHHH--SSS--SSCSSST----TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred CCCCccCccHHH--HHH--HCCHHHH----HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence 578999999943 221 2222111 2467799999999999999999999998877 4899999999999
Q ss_pred CCcccHHHHHHHH
Q 008197 539 DGRISLSEFRRLL 551 (574)
Q Consensus 539 dG~i~~~EF~~~~ 551 (574)
||.|+|+||+.++
T Consensus 73 ~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 73 SGTIDYGEFIAAT 85 (87)
T ss_dssp SSEECHHHHTTCC
T ss_pred CCcCcHHHHHHHH
Confidence 9999999998764
|
| >2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=107.45 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=77.1
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCC--------CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~--------~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+++||..++.... +.
T Consensus 67 ~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-~~---- 141 (191)
T 2ccm_A 67 DGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-IP---- 141 (191)
T ss_dssp HHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-CC----
T ss_pred HHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-CC----
Confidence 45568999999999999999998865311 123356789999999999999999999998875432 11
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 142 ---~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 170 (191)
T 2ccm_A 142 ---KSDCDAAFDTLSDGGKTMVTREIFARLWT 170 (191)
T ss_dssp ---HHHHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 13577899999999999999999998764
|
| >2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A | Back alignment and structure |
|---|
Probab=99.10 E-value=9.8e-11 Score=103.31 Aligned_cols=89 Identities=18% Similarity=0.276 Sum_probs=73.9
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC---
Q 008197 449 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 525 (574)
Q Consensus 449 ~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 525 (574)
.+++.+++.++..+|.+++ |.+|..+ ......++.+|+.||+|++|+|+.+||+.++...|
T Consensus 20 ~~~~~~~~~i~~~~d~~~~----~~~~~~l------------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~ 83 (150)
T 2jjz_A 20 ARQERRLAEINREFLCDQK----YSDEENL------------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPK 83 (150)
T ss_dssp HHHHHHHHHHHHHHHTCGG----GSSCTTH------------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCC
T ss_pred CCcHHHHHHHHHHhccCCC----chhhHhH------------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCC
Confidence 4678899999999998764 5555322 11234688899999999999999999999998776
Q ss_pred ---cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 526 ---SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 526 ---~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
++..+|..+|.|+||.|+|+||+.+|..
T Consensus 84 ~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~ 114 (150)
T 2jjz_A 84 THLEMKKMISEVTGGVSDTISYRDFVNMMLG 114 (150)
T ss_dssp CHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 3899999999999999999999999975
|
| >2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=101.52 Aligned_cols=99 Identities=13% Similarity=0.173 Sum_probs=81.4
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++..... .-. ...
T Consensus 43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---~~~---~~~ 116 (142)
T 2bl0_C 43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGD---RLK---PHE 116 (142)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSS---CCC---HHH
T ss_pred HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC---CCC---HHH
Confidence 46678999999999999999999999654455567789999999999999999999999988764321 111 135
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+| |++|.|+.+||..++.
T Consensus 117 ~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 117 FAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 778999999 9999999999988764
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=94.70 Aligned_cols=70 Identities=23% Similarity=0.334 Sum_probs=59.6
Q ss_pred HHhhhhccccccccCCC---CCCcCHHHHHHHHHhhCCCCc----cHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 413 EELADLRDQFDAIDVDK---NGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~---~G~i~~~El~~~l~~~~~~~~----~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..+++|+++|..||.++ +|+|+.+||+.+|...++..+ ++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 8 ~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 8 KAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 45688999999999964 799999999999976555433 37899999999999999999999999887643
|
| >3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-10 Score=104.41 Aligned_cols=96 Identities=21% Similarity=0.171 Sum_probs=76.7
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCCCC-cc-----HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHH
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LK-----ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 492 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~-~~-----~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~ 492 (574)
..+|..+|.|++|.|+.+||..++....... +. ...+..+|+.+|.|++|.|+++||..++.... ..
T Consensus 58 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-~~------ 130 (166)
T 3akb_A 58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-VP------ 130 (166)
T ss_dssp HHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-CC------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-CC------
Confidence 4789999999999999999999885532111 11 23489999999999999999999998776543 11
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 493 WHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 493 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 131 -~~~~~~~~~~~D~d~dg~i~~~ef~~~~~ 159 (166)
T 3akb_A 131 -EDLARQAAAALDTDGDGKVGETEIVPAFA 159 (166)
T ss_dssp -HHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred -HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 23577899999999999999999998764
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.09 E-value=8.6e-11 Score=87.85 Aligned_cols=63 Identities=21% Similarity=0.451 Sum_probs=58.5
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
+++++|..+|.|++|+|+.+||..++. .+|..++.+++..+|..+|.|++|.|+|+||+..+.
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~ 64 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVAL-AFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHH-HTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 578899999999999999999999995 489999999999999999999999999999998764
|
| >1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.7e-11 Score=95.21 Aligned_cols=72 Identities=33% Similarity=0.681 Sum_probs=65.0
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHH
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~ 478 (574)
+...++++++++++++|..+|.|++|+|+..||..++. .+|..++.+++..+|+.+|.|++|.|+|+||+.+
T Consensus 13 ~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 84 (87)
T 1s6j_A 13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH-TTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 44556777788999999999999999999999999994 5899999999999999999999999999999754
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.9e-11 Score=89.24 Aligned_cols=66 Identities=30% Similarity=0.535 Sum_probs=60.4
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
..++++++|..+|.|++|+|+.+||..++ +.+|..++..++..+|..+|.|++|.|+|+||+..+.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHG-GGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 34678999999999999999999999999 5589999999999999999999999999999997653
|
| >3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-10 Score=103.08 Aligned_cols=100 Identities=15% Similarity=0.229 Sum_probs=82.3
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++....... . ...
T Consensus 60 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~---~---~~~ 133 (161)
T 3fwb_A 60 EILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL---T---DEE 133 (161)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC---C---HHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCC---C---HHH
Confidence 4677889999999999999999999865444445578899999999999999999999998876432211 1 235
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 134 ~~~~~~~~d~~~~g~i~~~eF~~~~~ 159 (161)
T 3fwb_A 134 LRAMIEEFDLDGDGEINENEFIAICT 159 (161)
T ss_dssp HHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 77899999999999999999998775
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.4e-11 Score=94.44 Aligned_cols=71 Identities=32% Similarity=0.547 Sum_probs=63.4
Q ss_pred ccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
...+++++.++++++|..||.|++|+|+.+||..++.. +| .+..+++.+|..+|.|++|.|+|+||+.++.
T Consensus 18 ~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~ 88 (91)
T 2pmy_A 18 GADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEAVFQRLDADRDGAITFQEFARGFL 88 (91)
T ss_dssp -CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred hccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-cC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 34567888999999999999999999999999999954 77 6788999999999999999999999997764
|
| >2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A | Back alignment and structure |
|---|
Probab=99.07 E-value=5.9e-10 Score=98.86 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=79.8
Q ss_pred HHHHHHHHhhc-CCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc---------
Q 008197 453 SRVLEILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--------- 522 (574)
Q Consensus 453 ~~~~~~~~~~D-~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--------- 522 (574)
.++..+|..+| .|++|.|+.+||..++....... . ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~--~----~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~ 86 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQ--T----KSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSC--S----HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCT
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCC--C----HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccch
Confidence 35778999999 99999999999998776532111 1 23567899999999999999999998773
Q ss_pred --ccCcHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 523 --LKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 523 --~~~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
....+..+|+.+|.|++|.|+.+||..++....
T Consensus 87 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g 121 (158)
T 2jnf_A 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELD 121 (158)
T ss_dssp TTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhC
Confidence 233599999999999999999999999998643
|
| >3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-10 Score=115.03 Aligned_cols=109 Identities=19% Similarity=0.312 Sum_probs=83.2
Q ss_pred hhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 405 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 405 ~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
.+...++.+ ++.++|..+|.|++|.|+.+||..++...+....+++++.++|+.+|.|++|.|+.+||..++.....
T Consensus 330 sLG~~~Tee---EI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe 406 (440)
T 3u0k_A 330 SLGQNPTEA---ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE 406 (440)
T ss_dssp HTTCCCCHH---HHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC
T ss_pred HcCCCCCHH---HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC
Confidence 344445554 46678899999999999999999998664444455678999999999999999999999987754321
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.. . ..++..+|+.+|.|+||.|+.+||.+++.
T Consensus 407 ~L---S---deEIdeLfke~D~DgDGkIsyeEFvkmMt 438 (440)
T 3u0k_A 407 KL---T---DEEVDEMIREADIDGDGQVNYEEFVQMMT 438 (440)
T ss_dssp CC---C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHC
T ss_pred CC---C---HHHHHHHHHHhCCCCCCcEeHHHHHHHhC
Confidence 11 1 13577899999999999999999998875
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.6e-10 Score=94.83 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=62.9
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
.++.+++++++++|..||+ +||+|+.+|+..+|.+ +| .+++++..+++.+|.|+||.|+|+||+.+|...
T Consensus 8 ~ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 8 AVKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp SSCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHT-TT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 4678889999999999999 9999999999999954 55 678899999999999999999999999887643
|
| >2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-10 Score=107.75 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=82.5
Q ss_pred cccccccCCCCCC-cCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc---cccchHHHHH
Q 008197 420 DQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWHL 495 (574)
Q Consensus 420 ~~F~~~D~d~~G~-i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~---~~~~~~~~~~ 495 (574)
++|..+|.|++|. |+.+||..++.........++.+..+|+.+|.|++|.|+.+||..++...... ......+...
T Consensus 95 ~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~ 174 (214)
T 2l4h_A 95 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 174 (214)
T ss_dssp HHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHH
T ss_pred HHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence 4688899999999 99999999996543344556789999999999999999999999887654320 0111222233
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
.+..+|+.+|.|++|.|+.+||..++....
T Consensus 175 ~~~~~~~~~D~d~dG~Is~~EF~~~~~~~p 204 (214)
T 2l4h_A 175 LIDNILEESDIDRDGTINLSEFQHVISRSP 204 (214)
T ss_dssp HHHHHHHHHCCSCCSSBCSHHHHHHHHTCH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHhCh
Confidence 455699999999999999999999887543
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-10 Score=94.72 Aligned_cols=69 Identities=25% Similarity=0.348 Sum_probs=61.0
Q ss_pred HHhhhhcccccccc-CCCCC-CcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++++|+++|..|| .|++| +|+.+||..+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 7 GAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 45788999999997 89998 99999999999643 466788999999999999999999999999987754
|
| >2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=105.67 Aligned_cols=103 Identities=22% Similarity=0.343 Sum_probs=81.3
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... .. ...
T Consensus 48 ~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~---~~---~~~ 121 (179)
T 2f2o_A 48 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK---LT---DEE 121 (179)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--C---CC---HHH
T ss_pred HHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---CC---HHH
Confidence 467789999999999999999999885533323345678999999999999999999999877543211 11 235
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
+..+|+.+|.|++|.|+.+||..++...+
T Consensus 122 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 150 (179)
T 2f2o_A 122 VDEMIREADIDGDGQVNYEEFVQMMTAKG 150 (179)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred HHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence 77799999999999999999999887654
|
| >3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=107.95 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=83.3
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc-ccchHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-EHDSEKWH 494 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~-~~~~~~~~ 494 (574)
.++..+|..+|.|++|.|+.+||..++.. .........+..+|+.+|.|++|.|+++||..++....... ........
T Consensus 73 ~~~~~~~~~~D~d~dg~i~~~ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~ 151 (204)
T 3e3r_A 73 AEAEGVCRKWDRNGSGTLDLEEFLRALRP-PMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTED 151 (204)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHTSC-CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHH
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHh-hcCchHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChH
Confidence 45677899999999999999999998843 34445567899999999999999999999998765321100 00001112
Q ss_pred HHHHHHHHhcCC-CCCCcccHHHHHHhhcccC
Q 008197 495 LRSQAAFEKFDI-DRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 495 ~~~~~~F~~~D~-d~~G~I~~~El~~~l~~~~ 525 (574)
..+..+|+.+|. |++|.|+.+||..++...+
T Consensus 152 ~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 152 EVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 467789999999 9999999999998886544
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=99.07 E-value=8.9e-11 Score=94.66 Aligned_cols=69 Identities=23% Similarity=0.374 Sum_probs=55.9
Q ss_pred HHhhhhcccccccc-CCC-CCCcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~-~G~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++++++++|..|| .|+ +|+|+.+||..+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 ~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 45788999999999 798 5899999999999653 456678889999999999999999999999987753
|
| >1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 | Back alignment and structure |
|---|
Probab=99.07 E-value=4.5e-11 Score=92.60 Aligned_cols=64 Identities=31% Similarity=0.560 Sum_probs=58.6
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
++++.+|..+|.|++|+|+.+||..++.. +| .++..++..+|..+|.|++|.|+|+||+..+..
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRT-LG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHH-HH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 46788999999999999999999999955 77 889999999999999999999999999987654
|
| >3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=94.83 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcC-CCCC-CcccHHHHHHhhcc-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++++|+.|| +||+ |+|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 457889999997 7885 89999999998874 32 48999999999999999999999999753
|
| >1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-10 Score=102.19 Aligned_cols=100 Identities=23% Similarity=0.357 Sum_probs=79.6
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... -. ...
T Consensus 47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~~ 120 (148)
T 1exr_A 47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK---LT---DDE 120 (148)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCC---CC---HHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC---CC---HHH
Confidence 466788899999999999999998885533333445788899999999999999999999877543211 11 135
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 121 VDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 77799999999999999999988764
|
| >3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.6e-10 Score=105.00 Aligned_cols=104 Identities=18% Similarity=0.211 Sum_probs=81.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++... .....+.+..+|+.+|.|++|.|+.+||..++....... .-..+...
T Consensus 87 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~--~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~-~l~~~~~~ 163 (191)
T 3k21_A 87 YNFDLLLDQIDSDGSGKIDYTEFIAAALDR--KQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKG-NITQRDVN 163 (191)
T ss_dssp TTHHHHHHHHCTTCSSSEEHHHHHHHHSCG--GGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCS-CCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHhh--hhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCC-CCCHhHHH
Confidence 466788999999999999999999988332 235678999999999999999999999998875421111 11111123
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+|.|+||.|+.+||..+++
T Consensus 164 ~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 164 RVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 578899999999999999999998775
|
| >3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... | Back alignment and structure |
|---|
Probab=99.06 E-value=1.6e-10 Score=92.65 Aligned_cols=69 Identities=23% Similarity=0.436 Sum_probs=60.5
Q ss_pred HHhhhhccccccccCCCCC---CcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 413 EELADLRDQFDAIDVDKNG---SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G---~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..++.++++|..|| +++| +|+.+||..+|... +|..+++.+++.+|+.+|.|+||.|+|+||+.++...
T Consensus 6 ~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 6 KAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 45678999999999 7777 99999999999442 6788899999999999999999999999999877543
|
| >1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 | Back alignment and structure |
|---|
Probab=99.06 E-value=3.4e-10 Score=93.82 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=75.8
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+++.++|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+++||..++........... ..
T Consensus 10 ~e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~ 81 (109)
T 1bu3_A 10 ADVAAALKACE--AADSFNYKAFFAKVGL---TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT---DA 81 (109)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCC---HH
T ss_pred HHHHHHHHHhC--CCCcCcHHHHHHHHHc---ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCC---HH
Confidence 34556677777 8999999999998832 1345778999999999999999999999987765410001111 23
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+|.|++|.|+.+||..++.
T Consensus 82 ~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 82 ETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 577899999999999999999988764
|
| >4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.5e-10 Score=92.65 Aligned_cols=61 Identities=16% Similarity=0.226 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcC-CCCC-CcccHHHHHHhhcc-cC----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~~----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++++|+.|| +||+ |+|+.+||+.++.. +| +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 457889999997 6885 89999999998874 32 48999999999999999999999999753
|
| >2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A | Back alignment and structure |
|---|
Probab=99.06 E-value=2.8e-10 Score=94.24 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=53.8
Q ss_pred HHHHHHHHHhcC-CCCCC-cccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.|| +|++| +|+.+||+.++.. +| +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 457889999999 89997 9999999998864 32 48999999999999999999999998763
|
| >4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A | Back alignment and structure |
|---|
Probab=99.06 E-value=1.6e-10 Score=101.07 Aligned_cols=100 Identities=22% Similarity=0.330 Sum_probs=80.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++..+|..+|.|++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... .. ..
T Consensus 47 ~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~---~~---~~ 120 (147)
T 4ds7_A 47 AEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK---LT---DA 120 (147)
T ss_dssp HHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCC---CC---HH
Confidence 3467788899999999999999999986544444556789999999999999999999999887643211 11 13
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+| |++|.|+.+||..++.
T Consensus 121 ~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 121 EVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred HHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 5677999999 9999999999998775
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.1e-10 Score=94.86 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=55.1
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
.++.+|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|.....
T Consensus 12 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~ 76 (99)
T 1qjt_A 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVAC 76 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHH
Confidence 577899999999999999999999998776 4899999999999999999999999976443
|
| >1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.05 E-value=1.3e-10 Score=93.08 Aligned_cols=63 Identities=22% Similarity=0.322 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
...++++|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|.....
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~ 74 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVA 74 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Confidence 34688899999999999999999999987665 4889999999999999999999999976543
|
| >1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.8e-10 Score=93.46 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=75.9
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++.++|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+.+||..++........... ...
T Consensus 10 e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 81 (109)
T 1rwy_A 10 DIKKAIGAFT--AADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLS---AKE 81 (109)
T ss_dssp HHHHHHHTTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCC---HHH
T ss_pred HHHHHHHHcC--CCCcEeHHHHHHHHhc---CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCC---HHH
Confidence 4556677777 8999999999998832 1345788999999999999999999999987765411001111 135
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 82 ~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 82 TKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 77899999999999999999998765
|
| >2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.4e-10 Score=93.66 Aligned_cols=99 Identities=17% Similarity=0.159 Sum_probs=75.6
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+++..+|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+.+||..++........... ..
T Consensus 9 ~e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~ 80 (108)
T 2pvb_A 9 ADVAAALAACS--AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT---DA 80 (108)
T ss_dssp HHHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC---HH
T ss_pred HHHHHHHHHhC--CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC---HH
Confidence 35566777777 7999999999998832 2345778999999999999999999999877654310001111 23
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+|.|++|.|+.+||..++.
T Consensus 81 ~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 81 ETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 577899999999999999999988764
|
| >1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... | Back alignment and structure |
|---|
Probab=99.05 E-value=1.6e-10 Score=102.89 Aligned_cols=103 Identities=19% Similarity=0.279 Sum_probs=81.2
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCc---cHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL---KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 492 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~---~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~ 492 (574)
..+..+|..+|.|++|.|+.+||..++........ ....+..+|+.+|.|++|.|+.+||..++..... ...
T Consensus 56 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~---~~~-- 130 (162)
T 1top_A 56 EELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE---HVT-- 130 (162)
T ss_dssp HHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC---CCC--
T ss_pred HHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCC--
Confidence 34567899999999999999999998854322112 4567899999999999999999999988754321 111
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 493 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 493 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
...+..+|+.+|.|++|.|+.+||..++...
T Consensus 131 -~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 131 -EEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp -HHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred -HHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 1357779999999999999999999887654
|
| >1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=96.88 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=82.7
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..+..++. .+ ..+|.|++|.|+..||..++...... ......+..+|+.+|.|++|.|+.+||..++......
T Consensus 43 ~~~~~~~~---~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-- 116 (156)
T 1wdc_C 43 NPRNEDVF---AV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER-- 116 (156)
T ss_dssp CCCHHHHH---HT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC--
T ss_pred CCCHHHHH---HH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC--
Confidence 44554444 44 67899999999999999999765443 5567899999999999999999999999887643211
Q ss_pred cchHHHHHHHHHHHHh--cCCCCCCcccHHHHHHhhcc
Q 008197 488 HDSEKWHLRSQAAFEK--FDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~--~D~d~~G~I~~~El~~~l~~ 523 (574)
.. ...+..+|+. +|.|++|.|+.+||..++..
T Consensus 117 -~~---~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 117 -LS---DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp -CC---HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred -CC---HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 11 2357779999 99999999999999987754
|
| >2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.04 E-value=4.3e-10 Score=104.44 Aligned_cols=107 Identities=14% Similarity=0.126 Sum_probs=82.0
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCC----------------CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLP----------------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~----------------~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+..+|..+|.|++|.|+.+||..++..... .......+..+|+.+|.|++|.|+.+||..++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 677899999999999999999999965433 3445678999999999999999999999988765
Q ss_pred hhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 482 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
... ......+....+..+|+.+|.|++|.|+.+||..++...+
T Consensus 143 ~~g-~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (202)
T 2bec_A 143 MVG-VQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD 185 (202)
T ss_dssp SCC-SCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred hcC-CCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence 411 1112222223344456669999999999999999887654
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.6e-10 Score=94.37 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=56.1
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
..++++|+.||+|++|+|+.+|++.++...+ ++.++++.+|.|+||.|+|+||+.+|.....
T Consensus 22 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~~ 87 (110)
T 1iq3_A 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVA 87 (110)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHH
Confidence 4688899999999999999999999998765 5999999999999999999999999976543
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.3e-10 Score=93.51 Aligned_cols=67 Identities=33% Similarity=0.537 Sum_probs=60.8
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
...++++++|..||.|++|+|+.+||..++.. +|..+++++++.+|+.+|.|++|.|+|+||+.++.
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 34567899999999999999999999999954 78899999999999999999999999999997654
|
| >1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.7e-10 Score=93.04 Aligned_cols=63 Identities=24% Similarity=0.281 Sum_probs=56.3
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
...++++|+.||+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+|+||+.+|.....
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~ 75 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLISQ 75 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHH
Confidence 34688899999999999999999999998776 4889999999999999999999999976543
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-10 Score=95.88 Aligned_cols=71 Identities=20% Similarity=0.368 Sum_probs=60.0
Q ss_pred hHHhhhhcccccccc-CCCC-CCcCHHHHHHHHHhhCCCCc-cHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 412 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPWKL-KESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D-~d~~-G~i~~~El~~~l~~~~~~~~-~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
++++++|+++|..|| .|++ |+|+.+||..+|...+|... ++.+++.+++.+|.|+||.|+|+||+.++...
T Consensus 18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 345789999999999 7997 79999999999965567443 34789999999999999999999999887643
|
| >4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-10 Score=94.79 Aligned_cols=60 Identities=25% Similarity=0.449 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.||.| +|+|+.+||+.++.. ++ +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 45788999999988 899999999999875 22 49999999999999999999999999753
|
| >1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4e-10 Score=93.21 Aligned_cols=103 Identities=18% Similarity=0.225 Sum_probs=77.2
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++++ ++.++|..+| ++|.|+.+||..++.. .......+..+|+.+|.|++|.|+.+||..++.........
T Consensus 5 ~~t~~---e~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~ 76 (108)
T 1rro_A 5 ILSAE---DIAAALQECQ--DPDTFEPQKFFQTSGL---SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76 (108)
T ss_dssp TSCHH---HHHHHHHHTC--STTCCCHHHHHHHHSG---GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCC
T ss_pred cCCHH---HHHHHHHHcc--CCCCcCHHHHHHHHhc---CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCC
Confidence 44554 4555677777 8999999999998832 13457789999999999999999999998776543110011
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.. ...+..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 77 LT---ESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CC---HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 11 23577899999999999999999998764
|
| >3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4e-10 Score=91.47 Aligned_cols=61 Identities=23% Similarity=0.328 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcCCCC---CCcccHHHHHHhhccc-----C------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDIDR---DGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~---~G~I~~~El~~~l~~~-----~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.||+++ +|+|+.+||+.++... + +++++|+.+|.|+||.|+|+||+.+|...
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 457889999999963 7999999999988642 1 48999999999999999999999999754
|
| >1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A | Back alignment and structure |
|---|
Probab=99.03 E-value=2.3e-10 Score=100.30 Aligned_cols=100 Identities=13% Similarity=0.171 Sum_probs=78.1
Q ss_pred hhccccccc-cCCCCCCcCHHHHHHHHHhh--C---CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 417 DLRDQFDAI-DVDKNGSISLEEMRQALAKD--L---PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 417 ~l~~~F~~~-D~d~~G~i~~~El~~~l~~~--~---~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
++..+|..+ |.|++|.|+..||..++... . ........+..+|+.+|.|++|.|+.+||..++...... ..
T Consensus 41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~ 117 (148)
T 1m45_A 41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEK---LT 117 (148)
T ss_dssp HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTC---CC
T ss_pred HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---CC
Confidence 466778899 99999999999999998653 1 334556789999999999999999999999887643211 11
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 118 ---~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 118 ---DAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp ---HHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 23577899999999999999999998764
|
| >1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=4.7e-10 Score=102.33 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=81.5
Q ss_pred cccccccCCCCCC-cCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc---cccchHHHHH
Q 008197 420 DQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWHL 495 (574)
Q Consensus 420 ~~F~~~D~d~~G~-i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~---~~~~~~~~~~ 495 (574)
++|..+|.|++|. |+..||..++............+..+|+.+|.|++|.|+.+||..++...... ......+...
T Consensus 64 ~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~ 143 (183)
T 1dgu_A 64 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143 (183)
T ss_dssp HHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHH
Confidence 3677789999999 99999999997655444556789999999999999999999999877654220 0111111222
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
.+..+|+.+|.|++|.|+.+||..++....
T Consensus 144 ~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 173 (183)
T 1dgu_A 144 LIDNILEESDIDRDGTINLSEFQHVISRSP 173 (183)
T ss_dssp HHHHHHHHHCTTSSSEEEHHHHHHHHCSSC
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHhCh
Confidence 344599999999999999999999887654
|
| >1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.4e-10 Score=94.19 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=59.3
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
++.++++++|..||+|++|+|+.+|+..+|.. +| .+++++..+|+.+|.|+||.|+|+||+.++..
T Consensus 8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 45678999999999999999999999999954 55 57889999999999999999999999987754
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=99.02 E-value=7.4e-11 Score=88.00 Aligned_cols=62 Identities=27% Similarity=0.378 Sum_probs=56.6
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
++++|..+|.|++|.|+.+||..++.. +|..++.++++.+|+.+|.|++|.|+|+||+..+.
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHH-ccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 567899999999999999999999954 67788889999999999999999999999998764
|
| >1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 | Back alignment and structure |
|---|
Probab=99.02 E-value=4.7e-11 Score=98.89 Aligned_cols=71 Identities=21% Similarity=0.267 Sum_probs=62.4
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
.++.++.++++++|..||+|++|+|+.+||..+|. .+| .+++++..+++.+|.|+||.|+|+||+.+|...
T Consensus 15 ~ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~-~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFT-KSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCC-SSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHH-HcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 45777889999999999999999999999999994 355 566789999999999999999999999877543
|
| >1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6.9e-10 Score=92.05 Aligned_cols=98 Identities=19% Similarity=0.288 Sum_probs=75.6
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
++.++|..+| ++|.|+.+||..++ . + .......+..+|+.+|.|++|.|+.+||..++........... ...
T Consensus 11 e~~~~~~~~d--~~g~i~~~ef~~~~-~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~ 82 (110)
T 1pva_A 11 DIKKALDAVK--AEGSFNHKKFFALV-G-L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT---DAE 82 (110)
T ss_dssp HHHHHHHHTC--STTCCCHHHHHHHH-T-C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC---HHH
T ss_pred HHHHHHHhcC--CCCcCcHHHHHHHH-c-c-CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC---HHH
Confidence 4566677777 89999999999988 3 2 2345788999999999999999999999877654311011111 235
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+|.|++|.|+.+||..++.
T Consensus 83 ~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 83 TKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 77899999999999999999998765
|
| >3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A | Back alignment and structure |
|---|
Probab=99.02 E-value=6.9e-10 Score=97.58 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=79.8
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCc----cHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~----~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.++..+|..+|.|++|.|+.+||..++........ ....+..+|+.+|.|++|.|+.+||..++....... ..
T Consensus 47 ~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~--~~- 123 (153)
T 3ox6_A 47 MELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ--VG- 123 (153)
T ss_dssp HHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSC--CC-
T ss_pred HHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC--CC-
Confidence 34567888999999999999999999855332222 256789999999999999999999998876521111 11
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
...+..+|+.+|.|++|.|+.+||..++.
T Consensus 124 --~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 124 --HRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp --HHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred --HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 13577799999999999999999998775
|
| >2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.8e-11 Score=94.99 Aligned_cols=70 Identities=27% Similarity=0.400 Sum_probs=61.0
Q ss_pred hHHhhhhcccccccc-CCCCC-CcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 412 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
++++++++++|..|| .|++| +|+.+||..+|... +|..+++.+++.+++.+|.|+||.|+|+||+.++..
T Consensus 8 e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 456788999999999 89998 99999999999543 355678899999999999999999999999987653
|
| >1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=99.01 E-value=7.6e-10 Score=101.57 Aligned_cols=97 Identities=21% Similarity=0.248 Sum_probs=80.1
Q ss_pred HHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------c
Q 008197 453 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 526 (574)
Q Consensus 453 ~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 526 (574)
.++..+|..+|.|++|.|+++||..++....... . ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~--~----~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~ 83 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL--M----ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREEN 83 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCC--C----HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCS
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCC--C----HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHH
Confidence 3678999999999999999999998776542111 1 13567899999999999999999998775442 4
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 527 IDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 527 ~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
+..+|+.+|.|++|.|+.+||..++....
T Consensus 84 l~~~F~~~D~d~dG~Is~~El~~~l~~~g 112 (188)
T 1s6i_A 84 LVSAFSYFDKDGSGYITLDEIQQACKDFG 112 (188)
T ss_dssp THHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence 89999999999999999999999987543
|
| >3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A | Back alignment and structure |
|---|
Probab=99.01 E-value=3.7e-10 Score=116.09 Aligned_cols=127 Identities=20% Similarity=0.234 Sum_probs=96.3
Q ss_pred cccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHH
Q 008197 422 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 501 (574)
Q Consensus 422 F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F 501 (574)
+..+|.+.+|.|...|+.......+ ......++.++|+.+|.|++|.|+.+||..++....... . ...+..+|
T Consensus 282 ~k~iD~de~g~i~~~e~~~~~~~~l-s~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~--s----~eel~~Lf 354 (450)
T 3sg6_A 282 LKGIDFKEDGNILGHKLEYNTRDQL-TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP--T----EAELQDMI 354 (450)
T ss_dssp EEEESCCTTSTTTTTCBCCC---CC-CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC--C----HHHHHHHH
T ss_pred cccCCccccccchhhhhhhhhcccC-CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC--C----HHHHHHHH
Confidence 3457889999998887653321111 111235788999999999999999999998776532211 1 23577799
Q ss_pred HhcCCCCCCcccHHHHHHhhcccC-------cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 502 EKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 502 ~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
+.+|.|++|.|+.+||..++.... .+..+|+.+|.|+||.|+.+||..++....
T Consensus 355 ~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG 415 (450)
T 3sg6_A 355 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 415 (450)
T ss_dssp HTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred HHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC
Confidence 999999999999999998876532 388899999999999999999999998654
|
| >2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-10 Score=92.45 Aligned_cols=68 Identities=22% Similarity=0.402 Sum_probs=60.2
Q ss_pred HHhhhhcccccccc-CCCCC-CcCHHHHHHHHHhhCC--CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKDLP--WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~~~~--~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++.+++++|..|| +|++| +|+.+||..++...++ . +++.+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 7 KALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45678999999999 99999 9999999999965444 4 77889999999999999999999999987754
|
| >2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A | Back alignment and structure |
|---|
Probab=99.00 E-value=5.2e-10 Score=91.75 Aligned_cols=61 Identities=18% Similarity=0.324 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcC-CCCC-CcccHHHHHHhhcc-c-------CcHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-K-------GSIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~-G~I~~~El~~~l~~-~-------~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.|| +|++ |+|+.+||+.++.. + .+++++|+.+|.|+||.|+|+||+.+|...
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 457889999999 7997 79999999998853 2 259999999999999999999999998753
|
| >2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=97.70 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=78.7
Q ss_pred HHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------c
Q 008197 453 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S 526 (574)
Q Consensus 453 ~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~ 526 (574)
..+..+|..+|.|++|.|+++||..++........ ...+..+|+.+|.|++|.|+.+||..++.... .
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~ 100 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLK------ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDH 100 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCC------HHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHH
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHH
Confidence 45678999999999999999999987765321111 12567799999999999999999998775442 4
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 527 IDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 527 ~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
+..+|+.+|.|++|.|+.+||..++....
T Consensus 101 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~ 129 (166)
T 2aao_A 101 LFAAFTYFDKDGSGYITPDELQQACEEFG 129 (166)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHTCC--
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 88899999999999999999999987554
|
| >2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=4.3e-10 Score=92.93 Aligned_cols=69 Identities=13% Similarity=0.363 Sum_probs=64.2
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
++++.+++++|..||.|++|+|+.+||..++. .+|..++..++..+|..+|.|++|.|+|+||+.++..
T Consensus 28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLE-KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 67788999999999999999999999999995 4899999999999999999999999999999987653
|
| >1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 | Back alignment and structure |
|---|
Probab=98.99 E-value=4.7e-10 Score=83.75 Aligned_cols=57 Identities=30% Similarity=0.518 Sum_probs=52.4
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++.+
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 56799999999999999999999998776 4889999999999999999999999874
|
| >1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.8e-10 Score=89.88 Aligned_cols=67 Identities=24% Similarity=0.452 Sum_probs=60.3
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
...++++ +|..||.|++|+|+.+||..++ +.+| ..++..++..+|..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 73 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIM-QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHS-STTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHH-HHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 4457889 9999999999999999999999 4588 8899999999999999999999999999987653
|
| >3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} | Back alignment and structure |
|---|
Probab=98.98 E-value=6.3e-10 Score=102.98 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=71.3
Q ss_pred HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------
Q 008197 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 525 (574)
Q Consensus 452 ~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 525 (574)
...+..+|..+|.|++|.|+++||..++....... . ...+..+|+.+|.|++|.|+.+||..++....
T Consensus 56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~--~----~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~ 129 (197)
T 3pm8_A 56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQK--I----PPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKE 129 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----------CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCC--C----HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHH
Confidence 34678899999999999999999998876542111 1 13577899999999999999999988765433
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 526 SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 526 ~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.+..+|+.+|.|++|.|+.+||..++...
T Consensus 130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~ 158 (197)
T 3pm8_A 130 VCLIPFKFFDIDGNGKISVEELKRIFGRD 158 (197)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 47889999999999999999999999754
|
| >1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 | Back alignment and structure |
|---|
Probab=98.98 E-value=4.2e-10 Score=92.59 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=62.9
Q ss_pred ceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcc
Q 008197 469 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRI 542 (574)
Q Consensus 469 ~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i 542 (574)
.++++++...+..... . ....++.+|+.||+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|
T Consensus 5 ~~~~~~~~~~l~~~~~--~-----~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i 77 (105)
T 1wlz_A 5 ATADRDILARLHKAVT--S-----HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRL 77 (105)
T ss_dssp TTCCHHHHHHHHHHHH--H-----THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCB
T ss_pred chhHHHHHHHHHHHHH--c-----hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCC
Confidence 4667777765543211 1 124678899999999999999999999998776 48899999999999999
Q ss_pred cHHHHHHHHHhcc
Q 008197 543 SLSEFRRLLRTAS 555 (574)
Q Consensus 543 ~~~EF~~~~~~~~ 555 (574)
+|+||+.+|....
T Consensus 78 ~~~eF~~~~~~~~ 90 (105)
T 1wlz_A 78 KYPDFLSRFSSET 90 (105)
T ss_dssp CHHHHHHHHC---
T ss_pred cHHHHHHHHhccC
Confidence 9999999998544
|
| >2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.2e-10 Score=86.18 Aligned_cols=61 Identities=26% Similarity=0.447 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.++...
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 45788899999999999999999999998776 38899999999999999999999998753
|
| >2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.98 E-value=6.9e-10 Score=89.28 Aligned_cols=59 Identities=34% Similarity=0.572 Sum_probs=53.9
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.||+|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 29 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp HHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 3678899999999999999999999998776 4899999999999999999999999863
|
| >3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.5e-10 Score=85.04 Aligned_cols=56 Identities=25% Similarity=0.504 Sum_probs=51.2
Q ss_pred HHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 498 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 498 ~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+.+|+.+|.|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++..
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 4589999999999999999999988765 4888999999999999999999999875
|
| >1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A | Back alignment and structure |
|---|
Probab=98.97 E-value=7.8e-10 Score=89.08 Aligned_cols=60 Identities=20% Similarity=0.316 Sum_probs=52.2
Q ss_pred HHHHHHHHHhcC-CCC-CCcccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFD-IDR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~-~G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.|| +|+ +|+|+.+||+.++.. +| +++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 357888999999 798 589999999999864 23 4899999999999999999999999875
|
| >1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-10 Score=91.44 Aligned_cols=69 Identities=25% Similarity=0.406 Sum_probs=60.6
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC--CCccHHHHHH----HHHhhcCCCCcceehhchHHHHh
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--WKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~--~~~~~~~~~~----~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
+++..++++++|..||.|++|+|+.+||..++.. +| ..++.+++.. +|..+|.|++|.|+|+||+..+.
T Consensus 2 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~ 76 (83)
T 1yx7_A 2 ACKVKAELEAAFKKLDANGDGYVTALELQTFMVT-LDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANA 76 (83)
T ss_dssp CSCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHH-HTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-HccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhH
Confidence 3456678999999999999999999999999955 67 7778888888 99999999999999999996554
|
| >2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.4e-10 Score=85.02 Aligned_cols=58 Identities=45% Similarity=0.713 Sum_probs=53.5
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..++.+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.+|.
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 3678899999999999999999999998876 488999999999999999999999885
|
| >2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.96 E-value=5.8e-10 Score=101.18 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=56.4
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~ 497 (574)
+.++|..+|.|++|.|+..||..++........+.+++...|+.+|.|++|.|+.+||..++....... . ...+
T Consensus 49 ~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~---~---~~ei 122 (176)
T 2lhi_A 49 VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL---T---DAEV 122 (176)
T ss_dssp HHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCC---C---HHHH
T ss_pred HHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCccc---c---hHHH
Confidence 444556666666666666666666643333333455666666666666666666666665554321111 1 1234
Q ss_pred HHHHHhcCCCCCCcccHHHHHHhhcc
Q 008197 498 QAAFEKFDIDRDGFITPEELRMHTGL 523 (574)
Q Consensus 498 ~~~F~~~D~d~~G~I~~~El~~~l~~ 523 (574)
..+|+.+| |+||.|+.+||..++..
T Consensus 123 ~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 123 DDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred HHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 45666666 66666666666666643
|
| >1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-10 Score=92.49 Aligned_cols=69 Identities=20% Similarity=0.405 Sum_probs=60.9
Q ss_pred HHhhhhccccccccC-CCCC-CcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~-d~~G-~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+.+.+++++|..||. |++| +|+..||..++.+.+|..++..+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 7 ~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~ 77 (93)
T 1xk4_A 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 456789999999999 9999 99999999999555787677778999999999999999999999987653
|
| >3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.9e-09 Score=92.56 Aligned_cols=89 Identities=11% Similarity=0.111 Sum_probs=73.2
Q ss_pred CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCC
Q 008197 429 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 508 (574)
Q Consensus 429 ~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 508 (574)
++|.|+.+||..++............+..+|+.+|.|++|.|+.+||..++...... .. ...+..+|+.+|.|+
T Consensus 52 ~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~---~~---~~~~~~~~~~~D~d~ 125 (143)
T 3j04_B 52 APGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDR---FT---DEEVDEMYREAPIDK 125 (143)
T ss_dssp SSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSC---CC---HHHHHHHHHHTTCCS
T ss_pred CCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCC---CC---HHHHHHHHHHcCCCC
Confidence 899999999999997655556677899999999999999999999999887643211 11 235677999999999
Q ss_pred CCcccHHHHHHhhcc
Q 008197 509 DGFITPEELRMHTGL 523 (574)
Q Consensus 509 ~G~I~~~El~~~l~~ 523 (574)
+|.|+.+||..++..
T Consensus 126 dg~i~~~eF~~~~~~ 140 (143)
T 3j04_B 126 KGNFNYVEFTRILKH 140 (143)
T ss_dssp SSCCCSTHHHHHHHS
T ss_pred CCcCcHHHHHHHHhc
Confidence 999999999988764
|
| >1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.2e-09 Score=87.08 Aligned_cols=61 Identities=33% Similarity=0.502 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.||+|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.++...
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 45788899999999999999999999998776 48999999999999999999999999754
|
| >2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.95 E-value=9.7e-10 Score=89.15 Aligned_cols=61 Identities=16% Similarity=0.269 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcC-CCCCC-cccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D-~d~~G-~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...++.+|+.|| +|++| +|+.+||+.++.. +| +++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 356889999997 89998 9999999999864 33 48999999999999999999999998753
|
| >2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} | Back alignment and structure |
|---|
Probab=98.95 E-value=3.6e-09 Score=92.14 Aligned_cols=96 Identities=16% Similarity=0.137 Sum_probs=77.6
Q ss_pred cHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----
Q 008197 451 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----- 525 (574)
Q Consensus 451 ~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----- 525 (574)
+++++..+|..+|.|++|.|+++||..++....... . ...+..+|+. |++|.|+.+||..++....
T Consensus 3 s~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~--~----~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~ 73 (145)
T 2bl0_B 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNP--T----NAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTE 73 (145)
T ss_dssp CHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCC--C----HHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGG
T ss_pred CHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCC--C----HHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcc
Confidence 456699999999999999999999998776542211 1 1245567776 8999999999999887652
Q ss_pred ---cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 526 ---SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 526 ---~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
.+..+|+.+|.|++|.|+.+||..++....
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g 106 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLG 106 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcC
Confidence 488899999999999999999999998653
|
| >2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=9.6e-10 Score=87.85 Aligned_cols=60 Identities=27% Similarity=0.414 Sum_probs=54.9
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.||.|++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||+.++..
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 45788999999999999999999999988776 5899999999999999999999999875
|
| >1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A | Back alignment and structure |
|---|
Probab=98.95 E-value=4e-10 Score=90.46 Aligned_cols=69 Identities=28% Similarity=0.412 Sum_probs=61.7
Q ss_pred HHhhhhcccccccc-CCCCC-CcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~G-~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++.+++++|..|| .|++| +|+..||..++... +|..++..+++.+|..+|.|++|.|+|+||+.++..
T Consensus 6 ~~~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 80 (93)
T 1k2h_A 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (93)
T ss_dssp HHHHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45678999999999 79999 99999999999542 678889999999999999999999999999987654
|
| >1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A | Back alignment and structure |
|---|
Probab=98.94 E-value=2.2e-09 Score=98.40 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=76.4
Q ss_pred HHHHHHHHhhcCCCCcceehhchH-----HHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC--
Q 008197 453 SRVLEILQAIDCNTDGLVDFSEFV-----AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 525 (574)
Q Consensus 453 ~~~~~~~~~~D~d~dg~I~f~EF~-----~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-- 525 (574)
.++..+|..+|.|++|.|+++||. .++... .......+.....+..+|+.+|.|++|.|+.+||..++....
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~-g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~ 94 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNL-GATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATD 94 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcc
Confidence 467889999999999999999998 444322 111111111112578899999999999999999987654321
Q ss_pred ----------c-HH----HHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 526 ----------S-ID----PLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 526 ----------~-~~----~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
+ +. .+|+.+|.|++|.|+.+||..++....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g 139 (191)
T 1uhk_A 95 ELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAG 139 (191)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhC
Confidence 1 33 899999999999999999999997643
|
| >1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=89.22 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=54.8
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
...++++|+.||+ ++|+|+.+|++.++...| ++.++++.+|.|+||.|+|+||+.+|....
T Consensus 14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 3468889999999 999999999999998776 589999999999999999999999997543
|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A | Back alignment and structure |
|---|
Probab=98.94 E-value=4.6e-10 Score=123.47 Aligned_cols=119 Identities=14% Similarity=0.212 Sum_probs=96.1
Q ss_pred cccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhh-------cCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-------DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 424 ~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~-------D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
.||+|+||.|+..|+...+ +..+ ....++..+++.+ |.+++|.|+|+||+.++..... . .+
T Consensus 163 ~fd~n~dG~Is~kEl~~~l-~~~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~---R------~E 230 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCL-SKDK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE---R------SE 230 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHH-CSCH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC---C------TH
T ss_pred hccCCCCCCCCHHHHHHHH-HhcC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC---H------HH
Confidence 4799999999999999988 3222 1235688899988 6788999999999998765421 1 15
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC----------------cHHHHHHHhCC--C----CCCcccHHHHHHHHHhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADI--D----KDGRISLSEFRRLLRTA 554 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~--d----~dG~i~~~EF~~~~~~~ 554 (574)
++.+|+.||.|++|.|+. ||+.+|...+ ++.++++.++. | ++|.|++++|..+|...
T Consensus 231 I~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~ 309 (816)
T 3qr0_A 231 IEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE 309 (816)
T ss_dssp HHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred HHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence 788999999999999999 9999987654 27788988876 5 78999999999999854
Q ss_pred c
Q 008197 555 S 555 (574)
Q Consensus 555 ~ 555 (574)
.
T Consensus 310 ~ 310 (816)
T 3qr0_A 310 E 310 (816)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=3.9e-10 Score=119.70 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=83.6
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
..++.++|..+|.|++|.|+.+||..++.. .....+.+++..+|+.+|.|+||.|+++||..++.. ... . .
T Consensus 381 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~-~~~---~----~ 451 (484)
T 3nyv_A 381 EHEVDQVLDAVDFDKNGYIEYSEFVTVAMD-RKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV-SDV---D----S 451 (484)
T ss_dssp HHHHHHHHHHHTCCTTSEEEHHHHHHHHHH-HHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH-TTC---C----H
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHh-ccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-cCC---C----H
Confidence 457888999999999999999999998854 344456788999999999999999999999987754 111 1 2
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
..+..+|+.+|.|+||.|+.+||..++...
T Consensus 452 ~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 452 ETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 356789999999999999999999887643
|
| >2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A | Back alignment and structure |
|---|
Probab=98.93 E-value=2.3e-09 Score=100.01 Aligned_cols=105 Identities=12% Similarity=0.119 Sum_probs=79.5
Q ss_pred cccccccCCCCCCcCHHHHHHHHHhhCCCC---------------ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 420 DQFDAIDVDKNGSISLEEMRQALAKDLPWK---------------LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 420 ~~F~~~D~d~~G~i~~~El~~~l~~~~~~~---------------~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
++|..+|.|++|.|+.+||..++....... .....+..+|+.+|.|++|.|+.+||..++.....
T Consensus 65 ~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g 144 (208)
T 2ct9_A 65 RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVG 144 (208)
T ss_dssp HHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhC
Confidence 467888999999999999999986532211 25678999999999999999999999988764311
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
. .....+....+..+|+.+|.|+||.|+.+||..++...+
T Consensus 145 ~-~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 184 (208)
T 2ct9_A 145 V-NISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVD 184 (208)
T ss_dssp T-TCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSC
T ss_pred C-CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 1 112222222344559999999999999999999887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 574 | ||||
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-82 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-80 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-80 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 5e-78 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-77 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 2e-77 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 4e-74 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 5e-73 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-72 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 5e-72 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-71 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-71 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-70 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-66 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-66 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 4e-66 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 8e-66 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-65 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-64 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 1e-59 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-58 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-58 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 1e-58 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-58 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-58 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-57 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-57 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-56 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-55 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-55 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-54 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 3e-54 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-54 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 5e-54 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-53 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-53 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-52 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-52 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-51 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 4e-51 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 5e-51 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 7e-51 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 9e-51 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 1e-50 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-50 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-50 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-49 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 2e-49 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 9e-49 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-48 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 3e-48 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-48 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 6e-47 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 7e-47 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 3e-44 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-42 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-42 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 3e-41 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-41 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-41 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 9e-39 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-38 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 6e-21 | |
| d1lkja_ | 146 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-06 | |
| d1topa_ | 162 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 5e-20 | |
| d1exra_ | 146 | a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr | 1e-19 | |
| d1g8ia_ | 187 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 7e-19 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 8e-19 | |
| d1dtla_ | 156 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-18 | |
| d1bjfa_ | 181 | a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId | 1e-18 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 3e-18 | |
| d1uhka1 | 187 | a.39.1.5 (A:3-189) Calcium-regulated photoprotein | 6e-04 | |
| d2obha1 | 141 | a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien | 1e-17 | |
| d1fpwa_ | 190 | a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1 | 3e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 4e-16 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 0.001 | |
| d2scpa_ | 174 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 0.004 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 7e-16 | |
| d1s6ja_ | 87 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 9e-09 | |
| d1nyaa_ | 176 | a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth | 9e-16 | |
| d1s6ca_ | 178 | a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera | 1e-15 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 4e-15 | |
| d1w7jb1 | 139 | a.39.1.5 (B:11-149) Myosin Essential Chain {Human | 4e-04 | |
| d1qv0a_ | 189 | a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr | 7e-15 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 7e-15 | |
| d1pvaa_ | 109 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-08 | |
| d1s6ia_ | 182 | a.39.1.5 (A:) Calcium-dependent protein kinase sk5 | 2e-14 | |
| d2sasa_ | 185 | a.39.1.5 (A:) Sarcoplasmic calcium-binding protein | 6e-14 | |
| d2zfda1 | 183 | a.39.1.5 (A:32-214) Calcineurin B-like protein 2 { | 7e-14 | |
| d1omra_ | 201 | a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: | 2e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 4e-13 | |
| d5pala_ | 109 | a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis | 1e-08 | |
| d1jbaa_ | 189 | a.39.1.5 (A:) Guanylate cyclase activating protein | 4e-13 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-12 | |
| d2pvba_ | 107 | a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax | 1e-08 | |
| d1xo5a_ | 180 | a.39.1.5 (A:) Calcium- and integrin-binding protei | 1e-12 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 2e-12 | |
| d1f54a_ | 77 | a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom | 1e-06 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 3e-12 | |
| d1rroa_ | 108 | a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) | 2e-10 | |
| d1auib_ | 165 | a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch | 4e-12 | |
| d1jfja_ | 134 | a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly | 8e-12 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 1e-11 | |
| d1qxpa2 | 188 | a.39.1.8 (A:515-702) Calpain large subunit, C-term | 3e-11 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 2e-11 | |
| d1c7va_ | 68 | a.39.1.5 (A:) Calcium vector protein {Amphioxus (B | 6e-10 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 3e-11 | |
| d2opoa1 | 81 | a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che | 2e-08 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 3e-11 | |
| d1avsa_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-07 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 4e-11 | |
| d1rwya_ | 109 | a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta | 5e-09 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 7e-11 | |
| d2pq3a1 | 73 | a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T | 4e-06 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-10 | |
| d1wrka1 | 82 | a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens) | 1e-06 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 1e-10 | |
| d1oqpa_ | 77 | a.39.1.5 (A:) Caltractin (centrin 2) {Green algae | 4e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 1e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 7e-10 | |
| d1k94a_ | 165 | a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta | 0.001 | |
| d1juoa_ | 172 | a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: | 1e-10 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 4e-10 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 3e-09 | |
| d1tiza_ | 67 | a.39.1.5 (A:) Calmodulin-related protein T21P5.17 | 4e-04 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 4e-10 | |
| d1df0a1 | 186 | a.39.1.8 (A:515-700) Calpain large subunit, C-term | 2e-08 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 5e-10 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 3e-08 | |
| d1fi5a_ | 81 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), | 0.002 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 1e-09 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 2e-07 | |
| d1ij5a_ | 321 | a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind | 3e-07 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 2e-09 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 1e-08 | |
| d1jc2a_ | 75 | a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) | 0.004 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-09 | |
| d1cb1a_ | 78 | a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax | 2e-05 | |
| d2zkmx1 | 170 | a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human | 3e-09 | |
| d1wdcb_ | 142 | a.39.1.5 (B:) Myosin Essential Chain {Bay scallop | 3e-09 | |
| d1m45a_ | 146 | a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye | 3e-09 | |
| d1wdcc_ | 152 | a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop | 6e-09 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 6e-09 | |
| d1alva_ | 173 | a.39.1.8 (A:) Calpain small (regulatory) subunit ( | 1e-07 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 1e-08 | |
| d1snla_ | 99 | a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo | 9e-08 | |
| d1hqva_ | 181 | a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous | 2e-08 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-08 | |
| d1a4pa_ | 92 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 3e-04 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 4e-08 | |
| d1xk4a1 | 87 | a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d1ggwa_ | 140 | a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo | 5e-08 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 6e-08 | |
| d1fw4a_ | 65 | a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: | 5e-07 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-07 | |
| d2fcea1 | 61 | a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [ | 1e-05 | |
| d1psra_ | 100 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 2e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 3e-07 | |
| d3c1va1 | 93 | a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa | 1e-04 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 3e-07 | |
| d1qx2a_ | 76 | a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax | 2e-05 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 8e-07 | |
| d1yuta1 | 98 | a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d1y1xa_ | 182 | a.39.1.8 (A:) Programmed cell death 6 protein-like | 1e-06 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 1e-06 | |
| d1ksoa_ | 93 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 0.002 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 4e-06 | |
| d1zfsa1 | 93 | a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no | 0.001 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 5e-06 | |
| d1wlza1 | 83 | a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H | 0.003 | |
| d2jxca1 | 95 | a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [ | 1e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 3e-05 | |
| d1c07a_ | 95 | a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: | 2e-04 | |
| d1k8ua_ | 89 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 5e-05 | |
| d1e8aa_ | 87 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 9e-05 | |
| d1qlsa_ | 95 | a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), | 2e-04 | |
| d3cr5x1 | 90 | a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru | 2e-04 | |
| d1fi6a_ | 92 | a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: | 2e-04 | |
| d1qjta_ | 99 | a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: | 2e-04 | |
| d1sraa_ | 151 | a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPAR | 3e-04 | |
| d1j55a_ | 94 | a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien | 6e-04 | |
| d1xk4c1 | 83 | a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa | 0.002 | |
| d2hf5a1 | 33 | a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien | 0.004 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 257 bits (658), Expect = 3e-82
Identities = 116/310 (37%), Positives = 165/310 (53%), Gaps = 19/310 (6%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+D Y +LG G F +A DK VA+K I K L
Sbjct: 5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKA--------------LEGK 50
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
++ E+ +L + H N+V + +E ++Y+ M+L GGEL DRI + YTE+
Sbjct: 51 EGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRI--VEKGFYTER 107
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
DA+ ++ Q+L H G+VHRD+KPEN L+ S EDS + +DFGLS PG
Sbjct: 108 DASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
G+ YVAPEVL +K D WSIGVI YILLCG PF+D+ + +F+++L+ + +
Sbjct: 168 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 227
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
F W IS+SAKDF++ L+ KDP R T QAL HPW+ G A + I SV ++
Sbjct: 228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIK 286
Query: 391 QFVKYSRLKQ 400
+ S+ KQ
Sbjct: 287 KNFAKSKWKQ 296
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 253 bits (648), Expect = 4e-80
Identities = 99/299 (33%), Positives = 148/299 (49%), Gaps = 19/299 (6%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y I + LG G FG + +KA G K I L + VK
Sbjct: 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK---------------YTVK 74
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E+ I+ L H ++ ++AFED + + +E GGEL DRI +D + +E +
Sbjct: 75 NEISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA-AEDYKMSEAEVINY 132
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+RQ H H +VH D+KPEN + K+ SS+K DFGL+ + P + + +
Sbjct: 133 MRQACEGLKHMHEHSIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVTTAT 191
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
A + APE++ R+ G +D+W+IGV+ Y+LL G PF + + + V R +F
Sbjct: 192 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA 251
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 394
+ S+S AKDF+K LL K+PR RLT AL HPW++ I S N +RQ +K
Sbjct: 252 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIK 310
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 250 bits (640), Expect = 7e-80
Identities = 85/286 (29%), Positives = 141/286 (49%), Gaps = 18/286 (6%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F Y ++LG G K AVK I+ + E
Sbjct: 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGG------SFSAEEVQELRE 54
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + + +EK+
Sbjct: 55 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKET 112
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 273
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K +++
Sbjct: 113 RKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREV 169
Query: 274 VGSAYYVAPEVL-------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
G+ Y+APE++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 170 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 229
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 230 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 248 bits (634), Expect = 5e-78
Identities = 96/288 (33%), Positives = 152/288 (52%), Gaps = 22/288 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y I + LG G FG + T++A G+ A K + + E V+
Sbjct: 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---------------ETVR 71
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
+E++ + L H +V ++AFEDDN + + E GGEL +++ A + ++ +E +A
Sbjct: 72 KEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEY 129
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+RQ+ + H + VH D+KPEN +F + K + LK DFGL+ + P + + G+
Sbjct: 130 MRQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 188
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
A + APEV + K G +D+WS+GV++YILL G PF + +D + V +
Sbjct: 189 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA 248
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 380
+ IS KDF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 296
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (628), Expect = 1e-77
Identities = 81/319 (25%), Positives = 149/319 (46%), Gaps = 24/319 (7%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
K+ +Y I + LG G+FG + + ++ K ++
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----------------D 44
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
VK+E+ IL H N++ + +FE + + E G ++ +RI E+
Sbjct: 45 QVLVKKEISILNIA-RHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNER 102
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+ V Q+ H H + H D++PEN ++ + S++K +FG + +KPG F+
Sbjct: 103 EIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFR 161
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+ + Y APEV + +D+WS+G + Y+LL G PF +T I + ++ +
Sbjct: 162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT 221
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMR 390
F + + IS A DFV +LLVK+ ++R+TA++AL HPW+++ + + V+ ++
Sbjct: 222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE----RVSTKVIRTLK 277
Query: 391 QFVKYSRLKQFALRALAST 409
Y L + L + S
Sbjct: 278 HRRYYHTLIKKDLNMVVSA 296
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (629), Expect = 2e-77
Identities = 87/345 (25%), Positives = 155/345 (44%), Gaps = 30/345 (8%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
+ D ++LG G G +K ++ A+K ++
Sbjct: 7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------------------- 47
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDS 206
+REV++ + ++V+ + +E+ + I ME +GGEL RI + D
Sbjct: 48 -CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 106
Query: 207 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 266
+TE++A+ +++ + H + HRD+KPEN L+ S + ++ LK TDFG +
Sbjct: 107 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166
Query: 267 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIF 321
+ YYVAPEVL + D+WS+GVI YILLCG PF+ G+
Sbjct: 167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 226
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
+ + +F W +S K ++ LL +P R+T + ++HPW+ + + P+
Sbjct: 227 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286
Query: 382 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 426
S + + ++ +K+ ALA+ D E ++ DA +
Sbjct: 287 HTSRVLKEDKE-RWEDVKEEMTSALATMRVDYEQIKIKKIEDASN 330
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 236 bits (602), Expect = 4e-74
Identities = 97/283 (34%), Positives = 152/283 (53%), Gaps = 14/283 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ D Y G+ LG GQF +K+ G + A K I+K + ++
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK---------SSRRGVS 56
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
ED++REV IL+ + H NV+ + +E+ V + +EL GGEL D + K+ TE+
Sbjct: 57 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEE 113
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKPGKKF 270
+A ++Q+L H + H D+KPEN + +K DFGL+ I G +F
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 173
Query: 271 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329
++I G+ +VAPE++ + G E+D+WSIGVITYILL G PF T+ V
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+F + + + S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 232 bits (592), Expect = 5e-73
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 24/277 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ IG+ LG G+FG Y+A +K + +A+K + K + + ++
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ------------LEKAGVEHQLR 54
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
REV+I L H N+++ Y F D VY+ +E G + + +K S++ E+ A
Sbjct: 55 REVEIQSHL-RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATY 111
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
+ ++ + CH ++HRD+KPEN L S LK DFG S P + + G+
Sbjct: 112 ITELANALSYCHSKRVIHRDIKPENLLLGS---AGELKIADFGWSVHA-PSSRRTTLCGT 167
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+ PE+++ + + D+WS+GV+ Y L G+ PF T +K + R + F
Sbjct: 168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---- 223
Query: 336 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
++ A+D + +LL +P R + L HPW+
Sbjct: 224 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 232 bits (593), Expect = 1e-72
Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 25/290 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D ++YT + +G G G Y A D A G VA++++ +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---------------PKK 61
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E + E+ +++ + N+V + +++ + +++ ME GG L D + ++ E
Sbjct: 62 ELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQ 117
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 271
A V R+ L+ H + ++HRD+K +N L D S+K TDFG I K
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRS 174
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
+VG+ Y++APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT- 233
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380
+ +S +DF+ + L D R +A + L H +++ S +
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 230 bits (588), Expect = 5e-72
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 28/292 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPI 150
D + + + I LG G FG Y A +K A K I+
Sbjct: 7 DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---------------EE 51
Query: 151 AVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
+ED E+ IL + H N+VK +AF +N ++I +E C GG +D ++ + + TE
Sbjct: 52 ELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIEFCAGG-AVDAVMLELERPLTE 109
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKK 269
VV +Q L H + ++HRD+K N LF D +K DFG+S + ++
Sbjct: 110 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQR 166
Query: 270 FQDIVGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323
+G+ Y++APEV+ R ++DVWS+G+ + P + + +
Sbjct: 167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 226
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375
+ +++P +P S++ KDF+KK L K+ AR T +Q L HP+V +
Sbjct: 227 IAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 277
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 229 bits (584), Expect = 1e-71
Identities = 84/285 (29%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
F + + + LG G +G +A ++ + VAVK ++ + E
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--------------VDCPE 48
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++K+E+ I + L HENVVKFY + N Y+ +E C GGEL DRI + D E DA
Sbjct: 49 NIKKEICINKML-NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDA 105
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKF 270
Q++ H G+ HRD+KPEN L +LK +DFGL+ + +
Sbjct: 106 QRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE---RDNLKISDFGLATVFRYNNRERLL 162
Query: 271 QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
+ G+ YVAPE+LKR+ DVWS G++ +L G P+ ++ + K
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 222
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373
+ PW I ++ + K+LV++P AR+T W +
Sbjct: 223 KTYL-NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 229 bits (584), Expect = 3e-71
Identities = 79/319 (24%), Positives = 140/319 (43%), Gaps = 30/319 (9%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILP 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ +
Sbjct: 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG------------KQSN 56
Query: 150 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
+D+ +EV+ LQ L H N +++ + ++ ++ ME C G + KK
Sbjct: 57 EKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQ 113
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
E + A V L+ A H H ++HRD+K N L E +K DFG + + P
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPANS 170
Query: 270 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
F VG+ Y++APEV+ + + + DVWS+G+ L + P ++ +
Sbjct: 171 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS- 384
+N+ S ++FV L K P+ R T+ L H +V + I I
Sbjct: 228 QNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQR 285
Query: 385 VLNNMRQF--VKYSRLKQF 401
+ +R+ ++Y ++K+
Sbjct: 286 TKDAVRELDNLQYRKMKKI 304
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 224 bits (572), Expect = 9e-70
Identities = 86/280 (30%), Positives = 130/280 (46%), Gaps = 26/280 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ GK+LG G F +A + A A+K +EK I+ V V
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK------------ENKVPYVT 56
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE ++ L H VK Y F+DD +Y + + GELL I +K + E
Sbjct: 57 RERDVMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFY 113
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDI 273
+++ H G++HRD+KPEN L ED ++ TDFG + + P K
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSF 170
Query: 274 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
VG+A YV+PE+L KS SD+W++G I Y L+ G PF E IF+++++ + DF
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF- 229
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
A+D V+KLLV D RL + + ++
Sbjct: 230 ---PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 217 bits (553), Expect = 1e-66
Identities = 70/279 (25%), Positives = 123/279 (44%), Gaps = 24/279 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + K+LG G FG ++A K A+K ++K+ +++ VE
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV------------VLMDDDVECTM 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E ++L H + + F+ ++ ME GG+L+ I + ++ A
Sbjct: 51 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFY 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
+++ H G+V+RD+K +N L +D +K DFG+ + + K G
Sbjct: 109 AAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCG 165
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334
+ Y+APE+L + D WS GV+ Y +L G+ PF + E+ +F + + P +
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY--- 222
Query: 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQA-LSHPWVRE 372
+ AKD + KL V++P RL HP RE
Sbjct: 223 -PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (547), Expect = 3e-66
Identities = 74/282 (26%), Positives = 124/282 (43%), Gaps = 26/282 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ +Y +G LLG G FG Y ++ VA+K +EK++I
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRI---------SDWGELPNGT 52
Query: 154 DVKREVKILQAL-AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
V EV +L+ + +G V++ + FE + + +E E + L + + E+
Sbjct: 53 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEEL 111
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 272
A Q+L CH G++HRD+K EN L LK DFG +K + D
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGALLKD-TVYTD 168
Query: 273 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
G+ Y PE + R G + VWS+G++ Y ++CG PF E++R +
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVF 222
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
FR +S+ + ++ L P R T + +HPW+++
Sbjct: 223 FR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 214 bits (546), Expect = 4e-66
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 31/284 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
Y + +G G +G K++G + K+++ + + +
Sbjct: 6 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-------------EAEKQMLVS 52
Query: 158 EVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDA 213
EV +L+ L H N+V++Y+ D + +YI ME CEGG+L I K+ E+
Sbjct: 53 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 111
Query: 214 AVVVRQMLRVAAECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
V+ Q+ ECH H ++HRD+KP N ++K DFGL+ +
Sbjct: 112 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLARILNHDT 168
Query: 269 KF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326
F + VG+ YY++PE + R S +SD+WS+G + Y L PF ++ + ++
Sbjct: 169 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE 228
Query: 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370
K R+ S+ + + ++L R + + L +P +
Sbjct: 229 GKF---RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 213 bits (544), Expect = 8e-66
Identities = 55/283 (19%), Positives = 107/283 (37%), Gaps = 28/283 (9%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R +G G F Y D VA +++ K+ +
Sbjct: 9 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-------------KSERQRF 55
Query: 156 KREVKILQALAGHENVVKFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
K E ++L+ L H N+V+FY+++E + + EL G L + K+ K
Sbjct: 56 KEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL--KRFKVMKIK 112
Query: 212 DAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
RQ+L+ H ++HRD+K +N S+K D GL+ K
Sbjct: 113 VLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASF 169
Query: 270 FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNK 328
+ ++G+ ++APE+ + K DV++ G+ + P+ + I++ V
Sbjct: 170 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV 229
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
K+ ++ + ++ R + L+H + +
Sbjct: 230 KPAS--FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 212 bits (541), Expect = 2e-65
Identities = 69/281 (24%), Positives = 113/281 (40%), Gaps = 21/281 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G++LG G ++A D VAVK + + P +
Sbjct: 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL------------ARDPSFYLRFR 55
Query: 157 REVKILQALAGHENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKD 212
RE + AL H +V Y+ E + YI ME +G L D + + T K
Sbjct: 56 REAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKR 112
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG-LSDFIKPGKKFQ 271
A V+ + H +G++HRD+KP N + + + ++D +
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 172
Query: 272 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330
++G+A Y++PE + S SDV+S+G + Y +L G PF + + + +R P
Sbjct: 173 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 232
Query: 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371
+S V K L K+P R A + VR
Sbjct: 233 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 211 bits (537), Expect = 4e-64
Identities = 72/318 (22%), Positives = 114/318 (35%), Gaps = 63/318 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ LG G G + + K +G +A K I I P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--------------IKPAIRNQII 52
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+++L +V FY AF D + I ME +GG L + KK R E+ V
Sbjct: 53 RELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKV 109
Query: 217 VRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 275
+++ H ++HRD+KP N L S +K DFG+S + VG
Sbjct: 110 SIAVIKGLTYLREKHKIMHRDVKPSNILVNS---RGEIKLCDFGVSGQLIDSMA-NSFVG 165
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKPDF 331
+ Y++PE L+ +SD+WS+G+ + GR P +F +
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 332 -------------------------------------RRKPWPSISNSAKDFVKKLLVKD 354
+ P S +DFV K L+K+
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 355 PRARLTAAQALSHPWVRE 372
P R Q + H +++
Sbjct: 286 PAERADLKQLMVHAFIKR 303
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 197 bits (503), Expect = 1e-59
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 31/280 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ T+G+ +G G FG Y VAVK + P ++ K
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPT-------------PQQLQAFK 52
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
EV +L+ H N++ F + + I + CEG L L ++++ +
Sbjct: 53 NEVGVLRKTR-HVNILLFM-GYSTAPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDI 109
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDI 273
RQ + H ++HRD+K N ED ++K DFGL+ +F+ +
Sbjct: 110 ARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 274 VGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK- 328
GS ++APEV++ + +SDV++ G++ Y L+ G+ P+ + ++
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGY 226
Query: 329 -PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
K + + K + + L K R Q L+
Sbjct: 227 LSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (500), Expect = 1e-58
Identities = 78/282 (27%), Positives = 127/282 (45%), Gaps = 29/282 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ KLLG G FG + +KA G A+K + K +I V
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV------------IIAKDEVAHTVT 54
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++LQ H + AF+ + + ME GGEL + ++ +TE+ A
Sbjct: 55 ESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYG 111
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGS 276
+++ H +V+RD+K EN + +D +K TDFGL G + G+
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGT 168
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
Y+APEVL+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF---- 224
Query: 336 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
++S AK + LL KDP+ RL A + + H +
Sbjct: 225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 197 bits (502), Expect = 1e-58
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 28/285 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+++ +++G G FG Y G A+K ++K +I ++
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK------------QGETLAL 52
Query: 157 REVKILQALA--GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
E +L ++ +V AF + + ++L GG+L + + ++E D
Sbjct: 53 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMR 110
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
+++ H +V+RD+KP N L E ++ +D GL+ K V
Sbjct: 111 FYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHA-SV 166
Query: 275 GSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332
G+ Y+APEVL++ +D +S+G + + LL G PF E+ R
Sbjct: 167 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTMA 225
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVRE 372
+ S S + ++ LL +D RL A + P+ R
Sbjct: 226 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 270
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 196 bits (498), Expect = 1e-58
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ I + LG G FG ++ + NG A+K ++K ++ VE
Sbjct: 6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI------------VVRLKQVEHTND 53
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E +L + H +++ + F+D +++ M+ EGGEL L +K R+ A
Sbjct: 54 ERLMLSIV-THPFIIRMWGTFQDAQQIFMIMDYIEGGELFS--LLRKSQRFPNPVAKFYA 110
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 277
++ H +++RD+KPEN L ++ +K TDFG + ++ + G+
Sbjct: 111 AEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAKYVP--DVTYTLCGTP 165
Query: 278 YYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 336
Y+APEV+ + D WS G++ Y +L G PF+D ++++L + F
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----P 221
Query: 337 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
P + KD + +L+ +D RL +HPW +E
Sbjct: 222 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 3e-58
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 56/318 (17%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMIL 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------------- 57
Query: 149 PIAVEDVKREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLD-RIL 201
RE++I++ L H N+V+ F +D+ Y+ + ++ R
Sbjct: 58 ----RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 202 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 261
++ + + Q+ R A H G+ HRD+KP+N L + + LK DFG +
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA 170
Query: 262 DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG 319
+ G+ + S YY APE++ + DVWS G + LL G+ F +
Sbjct: 171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 320 IFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKD 354
E+++ P + PW P A +LL
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYT 290
Query: 355 PRARLTAAQALSHPWVRE 372
P ARLT +A +H + E
Sbjct: 291 PTARLTPLEACAHSFFDE 308
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 196 bits (498), Expect = 3e-58
Identities = 82/327 (25%), Positives = 123/327 (37%), Gaps = 60/327 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D RYT +G G +G A D N RVA+KKI +
Sbjct: 5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------------HQTYC 50
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSR 207
+ RE+KIL HEN++ + VY+ L G +L + K
Sbjct: 51 QRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL---KTQH 105
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+LR H ++HRD+KP N L LK DFGL+ P
Sbjct: 106 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVADPD 162
Query: 268 K----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
+ V + +Y APE++ D+WS+G I +L R F K
Sbjct: 163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 222
Query: 322 KEVLR-----------------------NKPDFRRKPW----PSISNSAKDFVKKLLVKD 354
+L + P + PW P+ + A D + K+L +
Sbjct: 223 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN 282
Query: 355 PRARLTAAQALSHPWVREGGDASEIPI 381
P R+ QAL+HP++ + D S+ PI
Sbjct: 283 PHKRIEVEQALAHPYLEQYYDPSDEPI 309
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 193 bits (492), Expect = 1e-57
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 63/314 (20%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y + + LG G++ + A + N ++V VK ++ K + +K
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------------------KKKIK 77
Query: 157 REVKILQALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
RE+KIL+ L G N++ + +D + E + T+ D
Sbjct: 78 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIR 132
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+++ V
Sbjct: 133 FYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 275 GSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKT---------------- 316
S Y+ PE+L D+WS+G + ++ + PF+
Sbjct: 191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250
Query: 317 --EDGIFKEVLRNKPDF----------------RRKPWPSISNSAKDFVKKLLVKDPRAR 358
D I K + P F + +S A DF+ KLL D ++R
Sbjct: 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 310
Query: 359 LTAAQALSHPWVRE 372
LTA +A+ HP+
Sbjct: 311 LTAREAMEHPYFYT 324
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 191 bits (487), Expect = 3e-57
Identities = 72/298 (24%), Positives = 111/298 (37%), Gaps = 43/298 (14%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKI 161
LG GQF Y A DK VA+KKI+ RE+K+
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHR----------SEAKDGINRTALREIKL 53
Query: 162 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 221
LQ L H N++ +AF + + + + E I+ T + L
Sbjct: 54 LQEL-SHPNIIGLLDAFGHKSNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTL 110
Query: 222 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 280
+ H H ++HRD+KP N L E+ LK DFGL+ F P + + V + +Y
Sbjct: 111 QGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYR 167
Query: 281 APEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP- 337
APE+L R G D+W++G I LL ++ + + WP
Sbjct: 168 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 227
Query: 338 -----------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372
+ + D ++ L + +P AR+TA QAL +
Sbjct: 228 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 285
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 190 bits (484), Expect = 2e-56
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 29/289 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
+ + K+LG G +G ++ + G A+K ++K I+ + E
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK-----------AKTTE 73
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+ E ++L+ + +V + AF+ + +++ ++ GGEL + + R+TE +
Sbjct: 74 HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEV 131
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP--GKKFQ 271
+ V +++ H G+++RD+K EN L + + TDFGLS ++
Sbjct: 132 QIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETERAY 188
Query: 272 DIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328
D G+ Y+AP++++ D WS+GV+ Y LL G PF E E+ R
Sbjct: 189 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 248
Query: 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
+S AKD +++LL+KDP+ RL A + H + ++
Sbjct: 249 LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 187 bits (475), Expect = 1e-55
Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 48/304 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y + +G G +G Y A + G+ A+KKI K
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-------------EGIPSTTI 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ IL+ L H N+VK Y+ + + E + L ++L + A
Sbjct: 49 REISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSF 105
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVG 275
+ Q+L A CH ++HRD+KP+N L + LK DFGL+ P +K+ +
Sbjct: 106 LLQLLNGIAYCHDRRVLHRDLKPQNLLINR---EGELKIADFGLARAFGIPVRKYTHEIV 162
Query: 276 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+ +Y AP+VL +K D+WS+G I ++ G F +E + R
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222
Query: 334 KPWPSI-------------------------SNSAKDFVKKLLVKDPRARLTAAQALSHP 368
K WP++ S D + K+L DP R+TA QAL H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 369 WVRE 372
+ +E
Sbjct: 283 YFKE 286
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (476), Expect = 1e-55
Identities = 72/311 (23%), Positives = 121/311 (38%), Gaps = 49/311 (15%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D++Y +G G +G + A D NG R VA+K++
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-------------EGMP 51
Query: 153 EDVKREVKILQALAG--HENVVKFYNAF-----EDDNYVYIAMELCEGGELLDRILAKKD 205
REV +L+ L H NVV+ ++ + + + + E + + +
Sbjct: 52 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT-TYLDKVPE 110
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ ++ Q+LR H H +VHRD+KP+N L S +K DFGL+
Sbjct: 111 PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQIKLADFGLARIYS 167
Query: 266 PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+V + +Y APEVL + S D+WS+G I + + F ++ ++
Sbjct: 168 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 227
Query: 325 LRNKPDFRRKPWP-----------------------SISNSAKDFVKKLLVKDPRARLTA 361
L + WP I KD + K L +P R++A
Sbjct: 228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 287
Query: 362 AQALSHPWVRE 372
ALSHP+ ++
Sbjct: 288 YSALSHPYFQD 298
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (471), Expect = 1e-54
Identities = 75/326 (23%), Positives = 116/326 (35%), Gaps = 62/326 (19%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y +G G FG + A + G +VA+KK+
Sbjct: 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-------------EGFPITAL 57
Query: 157 REVKILQALAGHENVVKFYNAFED--------DNYVYIAMELCEGGELLDRILAKKDSRY 208
RE+KILQ L HENVV +Y+ + CE ++
Sbjct: 58 REIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKF 114
Query: 209 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 268
T + V++ +L H + ++HRDMK N L D LK DFGL+ K
Sbjct: 115 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAK 171
Query: 269 K-----FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 321
+ + V + +Y PE+L +R GP D+W G I + TE
Sbjct: 172 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 231
Query: 322 KEVLRNKPDFRRKPWPSISN----------------------------SAKDFVKKLLVK 353
+ + + WP++ N A D + KLLV
Sbjct: 232 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 291
Query: 354 DPRARLTAAQALSHPWVREGGDASEI 379
DP R+ + AL+H + S++
Sbjct: 292 DPAQRIDSDDALNHDFFWSDPMPSDL 317
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 3e-54
Identities = 55/275 (20%), Positives = 100/275 (36%), Gaps = 31/275 (11%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+ + + +G G+FG + + G++VAVK I+ + +
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDAT-----------------AQAF 47
Query: 156 KREVKILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
E ++ L H N+V+ E+ +YI E G L+D + ++ S
Sbjct: 48 LAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 106
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
+ + VHRD+ N L ED+ K +DFGL+ +
Sbjct: 107 KFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQD--TGK 161
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFR 332
+ APE L+ K +SDVWS G++ + + GR P+ + V + ++
Sbjct: 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YK 218
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + +K D R + Q
Sbjct: 219 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 183 bits (466), Expect = 3e-54
Identities = 56/308 (18%), Positives = 106/308 (34%), Gaps = 36/308 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
RY +G+ +G G FG Y+ TD A G+ VA+K +
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----------------KHPQLH 50
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E KI + + G + + +Y + MEL + +++ K ++
Sbjct: 51 IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLL 108
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----- 271
QM+ H +HRD+KP+NFL K+ + + DFGL+ + + Q
Sbjct: 109 ADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 168
Query: 272 ---DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
++ G+A Y + D+ S+G + G P+ ++ R
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228
Query: 328 KPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGGDASEIP 380
P + ++ + + Q + + R+G +
Sbjct: 229 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS-YDYV 287
Query: 381 IDISVLNN 388
D ++L
Sbjct: 288 FDWNMLKF 295
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 185 bits (469), Expect = 5e-54
Identities = 78/320 (24%), Positives = 130/320 (40%), Gaps = 50/320 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ Y + +G G +G A D G +VA+KK+ + +
Sbjct: 15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR-------------PFQSELFA 61
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTE 210
+ RE+++L+ + HENV+ + F D + + + L K K + E
Sbjct: 62 KRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE 120
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
+V QML+ H G++HRD+KP N ED LK DFGL+ +
Sbjct: 121 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ--ADSEM 175
Query: 271 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + +Y APEV+ + D+WS+G I ++ G+ F KE+++
Sbjct: 176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 235
Query: 327 ---------------------NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTA 361
P+ +K + SI S A + ++K+LV D R+TA
Sbjct: 236 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA 295
Query: 362 AQALSHPWVREGGDASEIPI 381
+AL+HP+ D + P
Sbjct: 296 GEALAHPYFESLHDTEDEPQ 315
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (462), Expect = 3e-53
Identities = 69/316 (21%), Positives = 114/316 (36%), Gaps = 53/316 (16%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFGYTYVATDKANGDR-----VAVKKIEKNKILIR 137
++ YD +F R GK+LG G FG AT VAVK +++
Sbjct: 24 REYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--- 80
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
E + E+K++ L HEN+V A +Y+ E C G+LL
Sbjct: 81 -----------SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 129
Query: 198 DRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 236
+ + +K++ + T +D Q+ + VHRD
Sbjct: 130 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD 189
Query: 237 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRKS-GPE 292
+ N L +K DFGL+ I + + ++APE L +
Sbjct: 190 LAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 246
Query: 293 SDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 351
SDVWS G++ + I G P+ D F ++++N F+ + ++
Sbjct: 247 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN--GFKMDQPFYATEEIYIIMQSCW 304
Query: 352 VKDPRARLTAAQALSH 367
D R R + S
Sbjct: 305 AFDSRKRPSFPNLTSF 320
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (458), Expect = 5e-53
Identities = 71/304 (23%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+ + +G G +G Y A +K G+ VA+KKI + V
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP-------------STAI 49
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ +L+ L H N+VK + +N +Y+ E L + A +
Sbjct: 50 REISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSY 107
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVG 275
+ Q+L+ A CH H ++HRD+KP+N L + ++K DFGL+ P + + V
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARAFGVPVRTYTHEVV 164
Query: 276 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+ +Y APE+L + D+WS+G I ++ R F +E + R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 334 KPWPS-------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHP 368
WP + + + ++L DP R++A AL+HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 369 WVRE 372
+ ++
Sbjct: 285 FFQD 288
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (451), Expect = 3e-52
Identities = 65/290 (22%), Positives = 106/290 (36%), Gaps = 33/290 (11%)
Query: 88 FGYDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
D + R + LG G FG ++ T RVA+K ++ +
Sbjct: 7 LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM----------- 54
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
+ E +E ++++ L HE +V+ Y ++ YI E G LLD + +
Sbjct: 55 -----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETG 107
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ Q+ A VHRD++ N L E+ K DFGL+ I+
Sbjct: 108 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIE 164
Query: 266 PGK--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 321
+ Q + APE +SDVWS G++ L GR P+ +
Sbjct: 165 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 224
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPW 369
+V R +R P S D + + K+P R T + +
Sbjct: 225 DQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 271
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (447), Expect = 6e-52
Identities = 56/274 (20%), Positives = 101/274 (36%), Gaps = 29/274 (10%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
T K LG GQFG + VA+K I++ + + ++
Sbjct: 6 LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----------------SEDEFIE 48
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E K++ L+ HE +V+ Y ++I E G LL+ L + R+ + +
Sbjct: 49 EAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMC 106
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVG 275
+ + +HRD+ N L + +K +DFGLS ++ +
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKF 163
Query: 276 SAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333
+ PEVL +SD+W+ GV+ + I G+ P+ T + + + +R
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR- 222
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
S + + R T LS+
Sbjct: 223 --PHLASEKVYTIMYSCWHEKADERPTFKILLSN 254
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 176 bits (447), Expect = 2e-51
Identities = 67/291 (23%), Positives = 107/291 (36%), Gaps = 34/291 (11%)
Query: 89 GYDKDFDR-RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDL 144
+ K+ D I +++G G+FG K G R VA+K ++
Sbjct: 18 EFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT---------- 67
Query: 145 KMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK 204
D E I+ H NV+ V I E E G L D L +
Sbjct: 68 ----EKQRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQN 121
Query: 205 DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI 264
D ++T ++R + VHRD+ N L + K +DFGLS F+
Sbjct: 122 DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFL 178
Query: 265 KPGKKFQD------IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 316
+ + APE ++ RK SDVWS G++ + ++ G RP+WD T
Sbjct: 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 238
Query: 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ + + D+R P ++ + KD R Q ++
Sbjct: 239 NQDVINAIEQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 175 bits (444), Expect = 4e-51
Identities = 59/282 (20%), Positives = 104/282 (36%), Gaps = 27/282 (9%)
Query: 90 YDK-DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMI 147
YDK + +R T+ LG GQ+G Y K VAVK ++++ +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM------------- 55
Query: 148 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 207
VE+ +E +++ + H N+V+ + YI E G LLD +
Sbjct: 56 ---EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 111
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
+ + Q+ +HRD+ N L E+ +K DFGLS +
Sbjct: 112 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD 168
Query: 268 K--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324
+ APE L +SDVW+ GV+ + + + + E+
Sbjct: 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228
Query: 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
L + D+R + + ++ +P R + A+
Sbjct: 229 L--EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (443), Expect = 5e-51
Identities = 66/305 (21%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
+Y + +G G +G + A ++ + VA+K++ + V
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP-------------SSAL 49
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
RE+ +L+ L H+N+V+ ++ D + + E C+ +
Sbjct: 50 REICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG--DLDPEIVKSF 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 275
+ Q+L+ CH ++HRD+KP+N L + LK +FGL+ F P + + V
Sbjct: 107 LFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIPVRCYSAEVV 163
Query: 276 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFR 332
+ +Y P+VL + D+WS G I L RP + D K + R
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 333 RKPWPS-------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ WPS ++ + +D ++ LL +P R++A +AL H
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 368 PWVRE 372
P+ +
Sbjct: 284 PYFSD 288
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (447), Expect = 7e-51
Identities = 75/331 (22%), Positives = 129/331 (38%), Gaps = 67/331 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
+RY K +G G G A D VA+KK+ + +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-------------PFQNQTHAKRA 63
Query: 156 KREVKILQALAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYT 209
RE+ +++ + H+N++ N F E+ VY+ MEL + +
Sbjct: 64 YRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LCQVIQMELD 117
Query: 210 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 269
+ + ++ QML H G++HRD+KP N + KS D +LK DFGL+
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFM 174
Query: 270 FQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 326
V + YY APE +L D+WS+G I ++ + F + + +V+
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 327 --------------------NKPDFRRKPWPSI----------------SNSAKDFVKKL 350
N+P + +P + ++ A+D + K+
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 351 LVKDPRARLTAAQALSHPWVREGGDASEIPI 381
LV DP R++ AL HP++ D +E+
Sbjct: 295 LVIDPAKRISVDDALQHPYINVWYDPAEVEA 325
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (440), Expect = 9e-51
Identities = 55/285 (19%), Positives = 107/285 (37%), Gaps = 32/285 (11%)
Query: 89 GYDKDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLK 145
++ +++ + + LG GQFG ++ +VAVK +++ +
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----------- 50
Query: 146 MILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 205
+ + E +++ L H+ +V+ Y + +YI E E G L+D +
Sbjct: 51 -----SPDAFLAEANLMKQLQ-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSG 103
Query: 206 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 265
+ T + Q+ A +HRD++ N L K DFGL+ I+
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIE 160
Query: 266 PGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF 321
+ + + APE + +SDVWS G++ ++ GR P+ T +
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ + R +R + ++ + P R T S
Sbjct: 221 QNLERG---YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 1e-50
Identities = 60/291 (20%), Positives = 106/291 (36%), Gaps = 35/291 (12%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
D++ ++G G FG A K +G R+ + +
Sbjct: 8 DWND-IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------DH 54
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI------------ 200
D E+++L L H N++ A E Y+Y+A+E G LLD +
Sbjct: 55 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 114
Query: 201 --LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 258
S + + + R +HRD+ N L E+ K DF
Sbjct: 115 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADF 171
Query: 259 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL-CGRRPFWDKT 316
GLS + K ++A E L SDVWS GV+ + ++ G P+ T
Sbjct: 172 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 231
Query: 317 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+++++ + +R + + + D +++ + P R + AQ L
Sbjct: 232 CAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 2e-50
Identities = 52/275 (18%), Positives = 105/275 (38%), Gaps = 29/275 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
T + +G GQFG ++ N D+VA+K I + + + ED
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----------------SEEDFI 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E +++ L H +V+ Y + + + E E G L D + + + + +
Sbjct: 49 EEAEVMMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGM 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIV 274
+ A ++HRD+ N L E+ +K +DFG++ F+ +
Sbjct: 107 CLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTK 163
Query: 275 GSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKEVLRNKPDFR 332
+ +PEV + +SDVWS GV+ + + + + +++ + +++ FR
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FR 220
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
S + + P R ++ L
Sbjct: 221 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 5e-50
Identities = 79/323 (24%), Positives = 125/323 (38%), Gaps = 56/323 (17%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAV 152
+ RY +G G +G A D G RVAVKK+ + I
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-------------PFQSIIHA 61
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYV-----YIAMELCEGGELLDRILAKKDSR 207
+ RE+++L+ + HENV+ + F + + G +L + + K +
Sbjct: 62 KRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV---KCQK 117
Query: 208 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 267
T+ ++ Q+LR H ++HRD+KP N ED LK DFGL+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--D 172
Query: 268 KKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325
+ V + +Y APE++ D+WS+G I LL GR F K +L
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 326 RNKPDFR---------------------------RKPWPSISNSAKDFVKKLLVKDPRAR 358
R + + A D ++K+LV D R
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 359 LTAAQALSHPWVREGGDASEIPI 381
+TAAQAL+H + + D + P+
Sbjct: 293 ITAAQALAHAYFAQYHDPDDEPV 315
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (433), Expect = 1e-49
Identities = 56/282 (19%), Positives = 94/282 (33%), Gaps = 29/282 (10%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIA 151
++ + + LG G FG A + VAVK ++ + + P A
Sbjct: 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV------------LSQPEA 54
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
++D REV + +L H N+++ Y + EL G LLDR+ K +
Sbjct: 55 MDDFIREVNAMHSL-DHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL-RKHQGHFLLG 111
Query: 212 DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 271
+ Q+ +HRD+ N L +K DFGL +
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHY 168
Query: 272 ----DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL 325
+ APE LK ++ SD W GV + + G+ P+ I ++
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID 228
Query: 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+ R + + + P R T
Sbjct: 229 KEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 172 bits (437), Expect = 2e-49
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 30/282 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
++ K LG G FG + K +G+ A+K ++K K ++ +E
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E +ILQA+ +VK +F+D++ +Y+ ME GGE+ + ++ R++E A
Sbjct: 90 NEKRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFY 146
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 276
Q++ H L++RD+KPEN L + ++ TDFG + +K + + G+
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAKRVKG--RTWTLCGT 201
Query: 277 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 335
+APE++ K D W++GV+ Y + G PF+ I+++++ K F
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---- 257
Query: 336 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVRE 372
S+ KD ++ LL D R +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (429), Expect = 9e-49
Identities = 71/309 (22%), Positives = 106/309 (34%), Gaps = 48/309 (15%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIR 137
T YD ++ R + GK LG G FG AT VAVK ++ +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--- 66
Query: 138 VVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL 197
E + E+K+L L H N+V A + E C G+LL
Sbjct: 67 -----------LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLL 115
Query: 198 DRILAKKDS----------------RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 241
+ + K+DS +D Q+ + A +HRD+ N
Sbjct: 116 NFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175
Query: 242 FLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK-SGPESDVWS 297
L K DFGL+ IK + + ++APE + ESDVWS
Sbjct: 176 ILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 232
Query: 298 IGVITYILLCGRRP-FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 356
G+ + L + D F ++++ FR D +K DP
Sbjct: 233 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKTCWDADPL 290
Query: 357 ARLTAAQAL 365
R T Q +
Sbjct: 291 KRPTFKQIV 299
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (425), Expect = 2e-48
Identities = 56/279 (20%), Positives = 102/279 (36%), Gaps = 34/279 (12%)
Query: 102 KLLGHGQFGYTYVAT--DKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREV 159
K LG G FG K VAVK ++ + P +++ E
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKN-------------EANDPALKDELLAEA 59
Query: 160 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 219
++Q L + +V+ E +++ + ME+ E G L + +++ +K+ +V Q
Sbjct: 60 NVMQQL-DNPYIVRMIGICEAESW-MLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 115
Query: 220 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----IVG 275
+ VHRD+ N L + K +DFGLS ++ + +
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 276 SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 333
+ APE + K +SDVWS GV+ + G++P+ + + + + R
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE---RM 229
Query: 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQ---ALSHPW 369
D + D R A L + +
Sbjct: 230 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 268
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 167 bits (424), Expect = 3e-48
Identities = 55/286 (19%), Positives = 99/286 (34%), Gaps = 35/286 (12%)
Query: 97 RYTIGKL-LGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
I + LG G FG + + VA+K +++ E
Sbjct: 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--------------EKADTE 54
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
++ RE +I+ L + +V+ + + + ME+ GG L ++ K++ +
Sbjct: 55 EMMREAQIMHQL-DNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKRE-EIPVSNV 111
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD- 272
A ++ Q+ VHRD+ N L K +DFGLS + +
Sbjct: 112 AELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTA 168
Query: 273 ---IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRN 327
+ APE + RK SDVWS GV + L G++P+ + + +
Sbjct: 169 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 228
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWV 370
K R + P + + R Q + +
Sbjct: 229 K---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (420), Expect = 8e-48
Identities = 62/278 (22%), Positives = 104/278 (37%), Gaps = 30/278 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIAVE 153
R +G+ +G GQFG + + + VA+K + E
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS--------------DSVRE 53
Query: 154 DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA 213
+E ++ H ++VK + N V+I MELC GEL L +
Sbjct: 54 KFLQEALTMRQF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRS-FLQVRKYSLDLASL 110
Query: 214 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ-- 271
+ Q+ A VHRD+ N L S + +K DFGLS +++ ++
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 272 DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKP 329
++APE + R+ SDVW GV + IL+ G +PF + + + +
Sbjct: 168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 226
Query: 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
R P+ + + K DP R + +
Sbjct: 227 --RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 164 bits (415), Expect = 6e-47
Identities = 50/285 (17%), Positives = 105/285 (36%), Gaps = 34/285 (11%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVK 156
Y +G+ +G G FG + T+ N +VA+K + ++
Sbjct: 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----------------DAPQLR 48
Query: 157 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 216
E + + LAG + Y ++ + + ++L G L+ +L +++ K A+
Sbjct: 49 DEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMA 106
Query: 217 VRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIKPG------- 267
+QML H LV+RD+KP+NFL ++K + + DFG+ F +
Sbjct: 107 AKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP 166
Query: 268 -KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG----IF 321
++ +++ G+A Y++ + D+ ++G + L G P+
Sbjct: 167 YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE 226
Query: 322 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
+ + + R+ ++ A
Sbjct: 227 RIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (415), Expect = 7e-47
Identities = 60/304 (19%), Positives = 107/304 (35%), Gaps = 43/304 (14%)
Query: 90 YDKDFD---RRYTIGKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKILIRVV 139
D ++ R +GK LG G FG +A +VAVK ++ +
Sbjct: 4 EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT----- 58
Query: 140 SFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 199
+ D+ E+++++ + H+N++ A D +Y+ +E G L +
Sbjct: 59 ---------EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 109
Query: 200 ILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245
+ A++ + + + KD Q+ R +HRD+ N L
Sbjct: 110 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169
Query: 246 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY- 303
I KK + ++APE L R +SDVWS GV+ +
Sbjct: 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 229
Query: 304 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 363
I G P+ + +FK + R + +N ++ P R T Q
Sbjct: 230 IFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 286
Query: 364 ALSH 367
+
Sbjct: 287 LVED 290
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (398), Expect = 3e-44
Identities = 59/275 (21%), Positives = 101/275 (36%), Gaps = 24/275 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKR 157
+ K+LG G FG Y G++V + K L S + K IL
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA--IKELREATSPKANKEIL--------D 60
Query: 158 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 217
E ++ ++ + +V + I +L G LLD + KD +
Sbjct: 61 EAYVMASV-DNPHVCRLLGICLTSTVQLI-TQLMPFGCLLDYVREHKD-NIGSQYLLNWC 117
Query: 218 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIV 274
Q+ + LVHRD+ N L K +K TDFGL+ + +K +
Sbjct: 118 VQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 275 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332
++A E + + +SDVWS GV + L+ G +P+ I + + + R
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---R 231
Query: 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
P + + K + D +R + +
Sbjct: 232 LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 1e-42
Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 30/279 (10%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR----VAVKKIEKNKILIRVVSFQDLKMILPIAV 152
T K++G G+FG Y K + + VA+K ++ + V F
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFL---------- 57
Query: 153 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 212
E I+ H N+++ + I E E G L + +KD ++
Sbjct: 58 ----GEAGIMGQF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQ 111
Query: 213 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--- 269
++R + VHRD+ N L + K +DFGLS ++ +
Sbjct: 112 LVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATY 168
Query: 270 -FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327
+ APE + RK SDVWS G++ + ++ + + + + + +
Sbjct: 169 TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND 228
Query: 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366
FR ++ + + ++ R A +S
Sbjct: 229 --GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 152 bits (384), Expect = 2e-42
Identities = 50/307 (16%), Positives = 96/307 (31%), Gaps = 54/307 (17%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKM 146
++ R + +G G FG + A VAVK +++
Sbjct: 9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------------ 56
Query: 147 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 206
D +RE ++ + N+VK + + E G+L + + +
Sbjct: 57 --ADMQADFQREAALMAEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPH 113
Query: 207 RY----------------------TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 244
+ + + RQ+ A VHRD+ N L
Sbjct: 114 TVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV 173
Query: 245 KSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKR-KSGPESDVWSIGV 300
E+ +K DFGLS I ++ + ++ PE + + ESDVW+ GV
Sbjct: 174 ---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 230
Query: 301 ITYILLCGRR-PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 359
+ + + P++ + + V + + ++ K P R
Sbjct: 231 VLWEIFSYGLQPYYGMAHEEVIYYVRDGN---ILACPENCPLELYNLMRLCWSKLPADRP 287
Query: 360 TAAQALS 366
+
Sbjct: 288 SFCSIHR 294
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 3e-41
Identities = 55/300 (18%), Positives = 110/300 (36%), Gaps = 45/300 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIA 151
+ T+ + LG G FG Y K RVA+K + + + + F
Sbjct: 21 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL--------- 71
Query: 152 VEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR---- 207
E +++ +VV+ + MEL G+L + + + +
Sbjct: 72 -----NEASVMKEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 125
Query: 208 ----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 263
+ + ++ A + + VHRD+ N + ED ++K DFG++
Sbjct: 126 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRD 182
Query: 264 IKPG---KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTED 318
I +K + +++PE LK SDVWS GV+ + I +P+ + +
Sbjct: 183 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 242
Query: 319 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE 372
+ + V+ + + + ++ +P+ R + + +S P RE
Sbjct: 243 QVLRFVMEGG---LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (376), Expect = 3e-41
Identities = 53/284 (18%), Positives = 99/284 (34%), Gaps = 33/284 (11%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKILIRVVSFQDLKMILPIA 151
+++G G FG Y T N + AVK + +
Sbjct: 26 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--------------DIGE 71
Query: 152 VEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 210
V E I++ + H NV+ + + + + G+L + + + T
Sbjct: 72 VSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN-FIRNETHNPTV 129
Query: 211 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 270
KD Q+ + VHRD+ N + E ++K DFGL+ + +
Sbjct: 130 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFD 186
Query: 271 QD-----IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFW-DKTEDGIFKE 323
++A E L+ +K +SDVWS GV+ + L+ P + D I
Sbjct: 187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 246
Query: 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367
+L+ + R + + + K R + ++ +S
Sbjct: 247 LLQGR---RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 150 bits (379), Expect = 3e-41
Identities = 67/337 (19%), Positives = 121/337 (35%), Gaps = 56/337 (16%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVED 154
D RY + + LG G F ++A D N VA+K + +K+ + +D +L +
Sbjct: 12 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE--AAEDEIKLL----QR 65
Query: 155 VKREVKILQALAGHENVVKFYNAFED---DNYVYIAMELCEGGELLDRILAKKDSRYTEK 211
V + G +++K + F + + + G LL I +
Sbjct: 66 VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125
Query: 212 DAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGKK 269
+ +Q+L H G++H D+KPEN L + +L + L + +
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 185
Query: 270 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---- 324
+ + + + Y +PEVL G +D+WS + + L+ G F K+
Sbjct: 186 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 245
Query: 325 -----------------------------LRNKPDFRRKPWPSI-----------SNSAK 344
LRN + P + +
Sbjct: 246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 305
Query: 345 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 381
DF+ +L DPR R A ++HPW+++ EI +
Sbjct: 306 DFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 342
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (358), Expect = 9e-39
Identities = 60/313 (19%), Positives = 107/313 (34%), Gaps = 69/313 (22%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDV 155
R + + +G G+FG + + G+ VAVK +
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE------------------ERSW 42
Query: 156 KREVKILQ-ALAGHENVVKFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTE 210
RE +I Q + HEN++ F A DN +++ + E G L D + T
Sbjct: 43 FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 99
Query: 211 KDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262
+ + A H+ + HRD+K +N L K++ + D GL+
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAV 156
Query: 263 FIKPGKKFQD-----IVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRR 310
D VG+ Y+APEVL +S +D++++G++ + +
Sbjct: 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216
Query: 311 PF---------------WDKTEDGIFKEVLRNKPDFR---RKPWPSISNSAKDFVKKLLV 352
D + + + K V K R +++
Sbjct: 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWY 276
Query: 353 KDPRARLTAAQAL 365
+ ARLTA +
Sbjct: 277 ANGAARLTALRIK 289
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 1e-38
Identities = 67/307 (21%), Positives = 108/307 (35%), Gaps = 48/307 (15%)
Query: 90 YDKD---FDR-RYTIGKLLGHGQFGYTYVATD-----KANGDRVAVKKIEKNKILIRVVS 140
YD F R R +GK LG G FG A A VAVK +++ +
Sbjct: 3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 62
Query: 141 FQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA-FEDDNYVYIAMELCEGGELLDR 199
E+KIL + H NVV A + + + +E C+ G L
Sbjct: 63 LM--------------SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 108
Query: 200 ILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 245
+ +K++ T + Q+ + +HRD+ N L
Sbjct: 109 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 168
Query: 246 SAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVI 301
E + +K DFGL+ I + D ++APE + R +SDVWS GV+
Sbjct: 169 ---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 225
Query: 302 TYILLCGRR-PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 360
+ + P+ D F L+ R + + + +P R T
Sbjct: 226 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPT 283
Query: 361 AAQALSH 367
++ + H
Sbjct: 284 FSELVEH 290
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.2 bits (215), Expect = 6e-21
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+S L +E++A+ ++ F D D NGSIS E+ + E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDG 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 525
+ ++FSEF+A + + + E AF+ FD + DG I+ EL+ G
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLE-----AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 526 -----SIDPLLEEADIDKDGRISLSEFRRLLR 552
+D +L E D G I++ +F LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (107), Expect = 2e-06
Identities = 23/129 (17%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 349 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 408
L KD +++++ L+ G SE ++ + +F
Sbjct: 17 ALFDKDNNGSISSSE-LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
++ +L + F D + +G IS E++ L + KL ++ V ++L+ + + G
Sbjct: 76 LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDDMLREVS-DGSG 133
Query: 469 LVDFSEFVA 477
++ +F A
Sbjct: 134 EINIQQFAA 142
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 85.0 bits (209), Expect = 5e-20
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
+ L +E +A+ + FD D D G IS +E+ + + + I++ +D +
Sbjct: 12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGS 70
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 526
G +DF EF+ + + + + L F FD + DGFI EEL G
Sbjct: 71 GTIDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEH 128
Query: 527 -----IDPLLEEADIDKDGRISLSEFRRLL 551
I+ L++++D + DGRI EF +++
Sbjct: 129 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Score = 83.4 bits (205), Expect = 1e-19
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + E+ + +++ +D + +G
Sbjct: 3 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGT 61
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL------ 523
+DF EF++ + ++ + E AF+ FD D +G I+ ELR
Sbjct: 62 IDFPEFLSLMARKMKEQDSEEELIE-----AFKVFDRDGNGLISAAELRHVMTNLGEKLT 116
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLLRT 553
+D ++ EADID DG I+ EF R++ +
Sbjct: 117 DDEVDEMIREADIDGDGHINYEEFVRMMVS 146
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 7e-19
Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 28/177 (15%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
S+LK + L ++E+ F +G + ++ + P+
Sbjct: 3 SKLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTK 60
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ D N DG ++FSEF+ A L + + AF+ +D+D DG+IT
Sbjct: 61 FATFVFNVFDENKDGRIEFSEFIQA------LSVTSRGTLDEKLRWAFKLYDLDNDGYIT 114
Query: 514 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
E+ + +D + D + DG+++L EF+ +
Sbjct: 115 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 171
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 82.5 bits (203), Expect = 8e-19
Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 23/205 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQ---DLKMILPIAVED 154
IGKL+G G+ + + VK + + V + +A+
Sbjct: 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60
Query: 155 VKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 214
+ E + LQ L V K Y + + MEL + + R ++
Sbjct: 61 ARNEFRALQKLQ-GLAVPKVYAWEGN----AVLMELIDAK---------ELYRVRVENPD 106
Query: 215 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 274
V+ +L A+ + G+VH D+ N L + + DF S + + +++I+
Sbjct: 107 EVLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQSVEVGE-EGWREIL 161
Query: 275 GSAYYVAPEVLKRKSGPESDVWSIG 299
R E D+ S
Sbjct: 162 ERDVRNIITYFSRTYRTEKDINSAI 186
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 80.8 bits (198), Expect = 1e-18
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 404 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 462
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 2 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 60
Query: 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522
D + G VDF EF+ + + + + L F FD + DG+I EEL++
Sbjct: 61 DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 118
Query: 523 LKGS------IDPLLEEADIDKDGRISLSEFRRLLR 552
G I+ L+++ D + DGRI EF ++
Sbjct: 119 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Score = 81.4 bits (200), Expect = 1e-18
Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 28/177 (15%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
S+L+ ++ L + + E+ + F +G +S+EE ++ P+
Sbjct: 2 SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 59
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ + D N DG +DF EF+ A + + KW AF +D+D +G+I+
Sbjct: 60 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 113
Query: 514 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
E+ + + + + + D ++DG++SL EF R +
Sbjct: 114 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 170
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 80.8 bits (198), Expect = 3e-18
Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 20/163 (12%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP---------WKLKESRVLEILQ 460
+ + + F+ +DV+ NG ISL+EM + + K + V
Sbjct: 6 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65
Query: 461 AIDCNTDGLVDFSEFV-----AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
D+ ++ AT + + +++ + A F+ D D++G IT +
Sbjct: 66 GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125
Query: 516 ELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552
E + +T G + DID+ G++ + E R
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Score = 38.8 bits (89), Expect = 6e-04
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 2/152 (1%)
Query: 342 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK-YSRLKQ 400
S + V K + + V + +++ + +L
Sbjct: 30 SLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLAT 89
Query: 401 FALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQ 460
L A FD +D D+NG+I+L+E + K E +
Sbjct: 90 DELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGIIQSSEDCEETFR 148
Query: 461 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 492
D + G +D E L + EK
Sbjct: 149 VCDIDESGQLDVDEMTRQHLGFWYTMDPACEK 180
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.3 bits (189), Expect = 1e-17
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+E+ ++R+ FD D D G+I ++E+ + + L ++ K+ + +++ ID G ++
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKEL-KVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 472 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 525
F +F+ ++ E AF+ FD D G I+ + L+ G
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILK-----AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 526 SIDPLLEEADIDKDGRISLSEFRRLL 551
+ +++EAD D DG +S EF R++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIM 141
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 75.2 bits (184), Expect = 3e-16
Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 28/178 (15%)
Query: 396 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 453
S+L + L L + D E+ F + +G ++ E+ + + P+ E
Sbjct: 6 SKLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPED 63
Query: 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ D + +G + F EF+ + + W AFE +D++ DG+IT
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSW------AFELYDLNHDGYIT 117
Query: 514 PEELR----MHTGLKGS--------------IDPLLEEADIDKDGRISLSEFRRLLRT 553
+E+ + GS + + + D ++DG I+L EFR +
Sbjct: 118 FDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 74.3 bits (181), Expect = 4e-16
Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 15/155 (9%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK----------DLPWKLKESRVLEILQA 461
D + ++ F+ ID DK+G+I+ + + + +
Sbjct: 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 462 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 518
+D + F+ ++ F D + D I+ +E
Sbjct: 62 TAVAGGKGIDETTFI-NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120
Query: 519 -MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
M K + D + DG +SL EF
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 38.1 bits (87), Expect = 0.001
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 17/75 (22%)
Query: 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---------------- 533
S+ W + + F + D D+DG IT + + E
Sbjct: 1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60
Query: 534 -ADIDKDGRISLSEF 547
+ I + F
Sbjct: 61 LTAVAGGKGIDETTF 75
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Score = 36.6 bits (83), Expect = 0.004
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
L F A+D +++ +IS +E L ++ AID N DGL+
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145
Query: 471 DFSEFVAATLHVHQLEEHDSEKW 493
EFV A + + K
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 70.8 bits (173), Expect = 7e-16
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 463
+ +A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69
Query: 464 CNTDGLVDFSEFVAATLH 481
+ G +D+ EF+AAT+H
Sbjct: 70 IDKSGTIDYGEFIAATVH 87
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 50.3 bits (120), Expect = 9e-09
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524
++ G +D + A E SE+ + F+ D D G IT +EL+
Sbjct: 1 HSSGHIDDDDKHMA--------ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV 52
Query: 525 GS------IDPLLEEADIDKDGRISLSEF 547
GS I L++ ADIDK G I EF
Sbjct: 53 GSELMESEIKDLMDAADIDKSGTIDYGEF 81
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 73.1 bits (178), Expect = 9e-16
Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------------WKLKESRVLEILQAI 462
L+ +FD D D NG++ + + + +
Sbjct: 8 RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67
Query: 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--QAAFEKFDIDRDGFITPEELRMH 520
+DG + +F+ T ++ + S L + D + DG I +E
Sbjct: 68 GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW 127
Query: 521 TGLKGS----IDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSP 565
G + D + +G +SL E +R R
Sbjct: 128 LTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR-DFHFGRLDVELL 175
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 72.9 bits (178), Expect = 1e-15
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 26/161 (16%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
EL L F + +G ++ E +Q A+ P + + A D G
Sbjct: 10 FTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-------- 521
V F +FV A + + H+ +W F +DI++DG+I EE+
Sbjct: 68 VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 121
Query: 522 ----------GLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ +D ++ D +KDG ++L EF +
Sbjct: 122 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 162
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.4 bits (171), Expect = 4e-15
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTDGLVDFSE 474
+ ++ F+ D +G I + + + L + VL++L D VDF
Sbjct: 1 EFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 59
Query: 475 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPL- 530
F+ V + + + +L F FD + +G + ELR G K + + +
Sbjct: 60 FLPMLQAVAKNRGQGTYEDYL---EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVE 116
Query: 531 -LEEADIDKDGRISLSEFRRLL 551
+ D +G I+ F + +
Sbjct: 117 TVLAGHEDSNGCINYEAFLKHI 138
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.8 bits (89), Expect = 4e-04
Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478
+ F D + NG + E+R L K+ E V +L +++G +++ F+
Sbjct: 80 LEGFRVFDKEGNGKVMGAELRHV-LTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKH 137
Query: 479 TL 480
L
Sbjct: 138 IL 139
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Score = 71.2 bits (173), Expect = 7e-15
Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 20/163 (12%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAID-- 463
+ + + FD +D++ NG I+L+E+ + D L ++++ ++
Sbjct: 8 DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFR 67
Query: 464 ---CNTDGLVDFSEFVAA-----TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+ F +F+ T + + ++ A F+ FD D G IT +
Sbjct: 68 GCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 127
Query: 516 ELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 552
E + + + G + D+D G + + E R
Sbjct: 128 EWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 68.8 bits (168), Expect = 7e-15
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 457 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+I +A+D +G + +F A + F+ D D GFI E
Sbjct: 10 DIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKK--------VFKAIDADASGFIEEE 61
Query: 516 ELRMH------TGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 554
EL+ G + L+ AD D DG+I + EF L+ A
Sbjct: 62 ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 109
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 51.1 bits (122), Expect = 1e-08
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 464
L D++ F AID D +G I EE++ L L ++ L+A D
Sbjct: 32 LVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADK 91
Query: 465 NTDGLVDFSEFVA 477
+ DG + EF
Sbjct: 92 DGDGKIGIDEFET 104
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Score = 69.7 bits (169), Expect = 2e-14
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 11/150 (7%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A L +EE+ L++ F ID D +G+I+ +E++ L K + +L ES + +++ A D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 467 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 525
G +D+ EF+AAT+H+++LE + +AF FD D G+IT +E++ G
Sbjct: 60 SGTIDYGEFIAATVHLNKLEREE------NLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 526 ---SIDPLLEEADIDKDGRISLSEFRRLLR 552
ID +++E D D DG+I EF ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 68.1 bits (165), Expect = 6e-14
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 22/165 (13%)
Query: 410 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLPW--------------KLKESR 454
L+D + ++ FD D++ +GSI + + + E
Sbjct: 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61
Query: 455 VLEILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
++ D N D +V + E++A T+ + R F+ D+ DG
Sbjct: 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121
Query: 512 ITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 552
+ EE + + + + L+ ++ L
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 68.0 bits (165), Expect = 7e-14
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 408 STLDDEELADLRDQFDAID--VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+ E+ L + F I V +G I+ EE + AL K + + D
Sbjct: 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF--ADRVFDLFDTK 66
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 518
+G++ F EF H + + +F+ +D+ + GFI +E++
Sbjct: 67 HNGILGFEEF-----ARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 121
Query: 519 -------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
T ++ ID EEAD DG+I E+R L+
Sbjct: 122 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Score = 67.2 bits (163), Expect = 2e-13
Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 30/181 (16%)
Query: 394 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 451
K L + L L +EEL+ F +G I+ +E + +K P
Sbjct: 4 KSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADP 61
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
++ + ++ D N+DG +DF E+V A + + +W AF +D+D +G
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEW------AFSLYDVDGNGT 115
Query: 512 ITPEEL--------------------RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
I+ E+ + + + D +++ EF
Sbjct: 116 ISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGT 175
Query: 552 R 552
Sbjct: 176 L 176
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 63.8 bits (155), Expect = 4e-13
Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
LK + + + A G D+ F + + + FE D D+
Sbjct: 6 LKADDINKAISA--FKDPGTFDYKRFFHLVGLKGKTDAQ--------VKEVFEILDKDQS 55
Query: 510 GFITPEELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 554
GFI EEL+ G + LL D D DG+I EF +++ A
Sbjct: 56 GFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Score = 50.7 bits (121), Expect = 1e-08
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 403 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQ 460
+ + +++ F+ +D D++G I EE++ L L ++ +L
Sbjct: 30 FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87
Query: 461 AIDCNTDGLVDFSEFVA 477
A D + DG + EF
Sbjct: 88 AGDSDHDGKIGADEFAK 104
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.0 bits (160), Expect = 4e-13
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 31/167 (18%)
Query: 410 LDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ + A L++ + + +G++ + E ++ K + V + +A D N D
Sbjct: 15 VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDN 73
Query: 469 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTGLK 524
+DF E+VAA V + KW F+ +D DR+G I +E + LK
Sbjct: 74 TIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCIDRQELLDIVESIYKLK 127
Query: 525 GS-------------------IDPLLEEADIDKDGRISLSEFRRLLR 552
+ +D + D + DG++SL+EF R
Sbjct: 128 KACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 62.3 bits (151), Expect = 1e-12
Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
LK++ V L A C+ EF A + K + AF D D+
Sbjct: 5 LKDADVAAALAA--CSAADSFKHKEFFAKVGL--------ASKSLDDVKKAFYVIDQDKS 54
Query: 510 GFITPEELRMHTGLKGSIDP---------LLEEADIDKDGRISLSEFRRLLR 552
GFI +EL++ L + D D DG I + EF +++
Sbjct: 55 GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Score = 51.1 bits (122), Expect = 1e-08
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 464
L + L D++ F ID DK+G I +E++ L P L ++ L D
Sbjct: 31 KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 90
Query: 465 NTDGLVDFSEFVA 477
+ DG++ EF A
Sbjct: 91 DGDGMIGVDEFAA 103
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.0 bits (155), Expect = 1e-12
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 24/162 (14%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLE-ILQAIDCNT 466
L +E+ +F + + S+ Q + + +LK + E I + +
Sbjct: 11 LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 70
Query: 467 -DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 518
+ F +F+ D + + AF FD D DG + E+L
Sbjct: 71 AKDSLSFEDFLDLLSVFSDTATPDIKSHY-----AFRIFDFDDDGTLNREDLSRLVNCLT 125
Query: 519 --------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ +K ID +LEE+DID+DG I+LSEF+ ++
Sbjct: 126 GEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 167
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 60.4 bits (146), Expect = 2e-12
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
+S L +E++A+ ++ F D D NGSIS E+ + L E+ V +++ ID +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATV-MRSLGLSPSEAEVNDLMNEIDVDG 59
Query: 467 DGLVDFSEFVA 477
+ ++FSEF+A
Sbjct: 60 NHQIEFSEFLA 70
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.8 bits (103), Expect = 1e-06
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 551
+ AF FD D +G I+ EL G ++ L+ E D+D + +I SEF L+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.1 bits (148), Expect = 3e-12
Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 18/107 (16%)
Query: 457 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 515
+I A+ +C + +F + S+ + + F D D+ G++ +
Sbjct: 10 DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61
Query: 516 ELR------MHTGLKGSIDP---LLEEADIDKDGRISLSEFRRLLRT 553
EL+ + + L++ AD D DG+I EF+ ++ +
Sbjct: 62 ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.1 bits (135), Expect = 2e-10
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 464
S L + ++D F ID D++G + +E++ L K +L ES ++ A D
Sbjct: 32 TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91
Query: 465 NTDGLVDFSEFVA 477
+ DG + EF
Sbjct: 92 DGDGKIGADEFQE 104
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (150), Expect = 4e-12
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 13/163 (7%)
Query: 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 465
+ S D +E+ L +F +D+D +GS+S+EE LP + V ++ D +
Sbjct: 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTD 60
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--- 522
+G VDF EF+ + +K + D + L+M G
Sbjct: 61 GNGEVDFKEFIEGVSQFSV-KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 119
Query: 523 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 561
L+ +D + AD D DGRIS EF ++ I + V
Sbjct: 120 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 162
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Score = 60.9 bits (146), Expect = 8e-12
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 6/132 (4%)
Query: 422 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481
F IDV+ +G++S EE++ ++K K ++ + +
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQ----LLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 482 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--SIDPLLEEADIDKD 539
++ D + + ++ D+D DG +T EE+ G + + +AD + D
Sbjct: 62 YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121
Query: 540 GRISLSEFRRLL 551
G I+L EF
Sbjct: 122 GYITLEEFLEFS 133
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 61.7 bits (149), Expect = 1e-11
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478
F D+DK+GS+S EMR A+ + +KL ++ +++ A + + ++DF FV
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 153
Query: 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ + L + F++ D + G I
Sbjct: 154 LVRLEILFK------------IFKQLDPENTGTIQ 176
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Score = 60.5 bits (146), Expect = 3e-11
Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 26/156 (16%)
Query: 409 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 460
L +EE+ D + F + + IS++E++ L + + ++
Sbjct: 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVN 70
Query: 461 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 518
+D + +G + EF + F KFD+D+ G ++ E+R
Sbjct: 71 LMDRDGNGKLGLVEFNILWNRIRNYLTI------------FRKFDLDKSGSMSAYEMRMA 118
Query: 519 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
L + ++ D + I F R L
Sbjct: 119 IEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 154
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 57.5 bits (139), Expect = 2e-11
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 476
++ F D + +G I +E + + K L ++ V E ++ D + +G++D EF+
Sbjct: 3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62
Query: 477 A 477
Sbjct: 63 D 63
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Score = 53.3 bits (128), Expect = 6e-10
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRL 550
AF+ FD + DG I +E + G ++ ++EAD D +G I + EF L
Sbjct: 5 LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 64
Query: 551 LR 552
++
Sbjct: 65 IK 66
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 57.2 bits (138), Expect = 3e-11
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 471
+++AD F D + +G IS E+ AL E R ++ ID + DG +
Sbjct: 2 PQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVR--RMMAEIDTDGDGFIS 59
Query: 472 FSEFVA 477
F EF
Sbjct: 60 FDEFTD 65
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Score = 49.5 bits (118), Expect = 2e-08
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 498 QAAFEKFDIDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ F++FD + DG I+ EL + + + ++ E D D DG IS EF R
Sbjct: 9 ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 68
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 57.3 bits (138), Expect = 3e-11
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E +A+ + FD D D G IS +E+ + + + I++ +D + G
Sbjct: 8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGT 66
Query: 470 VDFSEFVA 477
+DF EF+
Sbjct: 67 IDFEEFLV 74
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 47.3 bits (112), Expect = 1e-07
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 551
+AAF+ FD D G I+ +EL + G +D ++EE D D G I EF ++
Sbjct: 17 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 76
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 57.7 bits (139), Expect = 4e-11
Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 19/114 (16%)
Query: 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 509
L + + + A D +F +K + F D D+
Sbjct: 6 LSAEDIKKAIGA--FTAADSFDHKKFFQMV--------GLKKKSADDVKKVFHILDKDKS 55
Query: 510 GFITPEELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 554
GFI +EL L+ D D DG+I + EF L+ +
Sbjct: 56 GFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Score = 51.9 bits (124), Expect = 5e-09
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 464
L + D++ F +D DK+G I +E+ L L ++ A D
Sbjct: 32 MVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDK 91
Query: 465 NTDGLVDFSEFVA 477
+ DG + EF
Sbjct: 92 DGDGKIGVEEFST 104
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 56.1 bits (135), Expect = 7e-11
Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +E++A+ ++ F D D +G+I+ +E+ + L E+ + +++ +D + +G
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGT 60
Query: 470 VDFSEFVA 477
+DF EF+
Sbjct: 61 IDFPEFLT 68
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Score = 42.7 bits (100), Expect = 4e-06
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551
+ AF FD D DG IT +EL G + ++ E D D +G I EF ++
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 55.8 bits (134), Expect = 1e-10
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 404 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 462
+A L +E+ + + FD + ++GSIS +E+ + + + L + E++ +
Sbjct: 3 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 61
Query: 463 DCNTDGLVDFSEFVA 477
D + G VDF EF+
Sbjct: 62 DEDGSGTVDFDEFLV 76
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 44.6 bits (105), Expect = 1e-06
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 498 QAAFEKFDID-RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 550
+AAF+ F + DG I+ +EL + G + +++E D D G + EF +
Sbjct: 18 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 77
Query: 551 L 551
+
Sbjct: 78 M 78
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 55.6 bits (134), Expect = 1e-10
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+ + ++ F D D +G+I+++++R+ K+L L E + E++ D N D +
Sbjct: 4 ERDSREEILKAFRLFDDDNSGTITIKDLRRVA-KELGENLTEEELQEMIAEADRNDDNEI 62
Query: 471 DFSEFVA 477
D EF+
Sbjct: 63 DEDEFIR 69
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 54.1 bits (130), Expect = 4e-10
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 487 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDG 540
E DS + AF FD D G IT ++LR G + ++ EAD + D
Sbjct: 4 ERDSRE---EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 541 RISLSEFRRLLRTASI 556
I EF R+++ S+
Sbjct: 61 EIDEDEFIRIMKKTSL 76
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 1e-10
Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 25/144 (17%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFS 473
+ F A+ ++G + EE+++ L + ++ +D + G + F+
Sbjct: 2 VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 474 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 533
F + + F D D G + ELR + L +
Sbjct: 61 AFK------------ELWAALNAWKENFMTVDQDGSGTVEHHELRQ--AIGLMGYRLSPQ 106
Query: 534 ------ADIDKDGRISLSEFRRLL 551
K+GRI ++
Sbjct: 107 TLTTIVKRYSKNGRIFFDDYVACC 130
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (134), Expect = 7e-10
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
Query: 421 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480
F +D D +G++ E+RQA+ + ++L + I++ +G + F ++VA +
Sbjct: 75 NFMTVDQDGSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCV 131
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ L + F K D + G
Sbjct: 132 KLRALTD------------FFRKRDHLQQGSAN 152
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 0.001
Identities = 15/92 (16%), Positives = 23/92 (25%), Gaps = 1/92 (1%)
Query: 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524
DG VD E L + S + D D G + +
Sbjct: 11 GQDGEVDAEELQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69
Query: 525 GSIDPLLEEADIDKDGRISLSEFRRLLRTASI 556
+ D D G + E R+ +
Sbjct: 70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGY 101
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (140), Expect = 1e-10
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 21/149 (14%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDG 468
+ L F A+ ++G I +E+++ L + ++ +D + G
Sbjct: 4 QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 62
Query: 469 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 526
+ F+EF ++ +H F FD DR G + P+EL+ + T
Sbjct: 63 TMGFNEFKELWAVLNGWRQH------------FISFDTDRSGTVDPQELQKALTTMGFRL 110
Query: 527 IDPLLEE--ADIDKDGRISLSEFRRLLRT 553
+ +G+I+ ++
Sbjct: 111 SPQAVNSIAKRYSTNGKITFDDYIACCVK 139
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 53.8 bits (129), Expect = 4e-10
Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 475
+ + F+ D +K+G +SL+E R+ + +++ + ID + +G ++ EF
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
Query: 476 VAA 478
+
Sbjct: 60 TSC 62
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 51.1 bits (122), Expect = 3e-09
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELR------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
+ FEKFD ++DG ++ +E R + I EE D+D +G ++ EF +
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 552 R 552
Sbjct: 64 E 64
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 36.8 bits (85), Expect = 4e-04
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Query: 453 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 512
S + + D N DG + EF FE+ D+D +G +
Sbjct: 1 SSAKRVFEKFDKNKDGKLSLDEFREV------ALAFSPYFTQEDIVKFFEEIDVDGNGEL 54
Query: 513 TPEE 516
+E
Sbjct: 55 NADE 58
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 57.1 bits (137), Expect = 4e-10
Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 26/156 (16%)
Query: 409 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 460
++E++ D R F + ++ IS E++ L + L ++
Sbjct: 10 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVD 68
Query: 461 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 518
+D + G + EF + + Q + + D+DR G + E+R
Sbjct: 69 MLDEDGSGKLGLKEF------------YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKA 116
Query: 519 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
L + ++ D + I F R L
Sbjct: 117 LEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 152
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Score = 51.7 bits (123), Expect = 2e-08
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478
+ + IDVD++G+++ EMR+AL ++ +KL ++ +++ A + + ++DF FV
Sbjct: 94 QKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 151
Query: 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ + L + F++ D + G I
Sbjct: 152 LVRLEILFK------------IFKQLDPENTGTIQ 174
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 53.8 bits (129), Expect = 5e-10
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 551
F FD + DG+I EEL++ G I+ L+++ D + DGRI EF +
Sbjct: 18 SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
Query: 552 R 552
+
Sbjct: 78 K 78
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 48.8 bits (116), Expect = 3e-08
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
EE +L D F D + +G I LEE++ L + E + E+++ D N DG +
Sbjct: 12 KTEE--ELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDKNNDGRI 68
Query: 471 DFSEFVA 477
D+ EF+
Sbjct: 69 DYDEFLE 75
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Score = 35.3 bits (81), Expect = 0.002
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 438 MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497
M + + D K +E + ++ + D N DG +D E L+
Sbjct: 1 MVRCMKDDSKGKTEE-ELSDLFRMFDKNADGYIDLEELK------IMLQATGETITEDDI 53
Query: 498 QAAFEKFDIDRDGFITPEE-LRMHTGLK 524
+ + D + DG I +E L G++
Sbjct: 54 EELMKDGDKNNDGRIDYDEFLEFMKGVE 81
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 57.3 bits (137), Expect = 1e-09
Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 24/182 (13%)
Query: 399 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 458
LR L +E+ LR F + V +G S ++++Q L + E + ++
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVL-AKYADTIPEGPLKKL 163
Query: 459 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--------------------- 497
++ +T G + + VA + L + +
Sbjct: 164 FVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS 223
Query: 498 --QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555
A F D D + E + L AD DK G++S E +++L A
Sbjct: 224 VQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAH 283
Query: 556 IS 557
I
Sbjct: 284 IP 285
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 50.8 bits (120), Expect = 2e-07
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEE 533
V E L + + D D+ G ++ EE++ + + +
Sbjct: 239 DVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSV 298
Query: 534 ADIDKDGRISLSEFRRLL 551
D+D +S EF L+
Sbjct: 299 VDVDDSKSLSYQEFVMLV 316
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 12/56 (21%), Positives = 24/56 (42%)
Query: 422 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477
+ D DK+G +S EE+++ L + + +D + + + EFV
Sbjct: 259 YAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 51.8 bits (124), Expect = 2e-09
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551
F FD + DGFI EEL G I+ L++++D + DGRI EF +++
Sbjct: 12 ANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 71
Query: 552 R 552
Sbjct: 72 E 72
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 49.9 bits (119), Expect = 1e-08
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
EE +L + F D + +G I +EE+ + + + E + ++++ D N DG +
Sbjct: 6 KSEE--ELANCFRIFDKNADGFIDIEELGEI-LRATGEHVIEEDIEDLMKDSDKNNDGRI 62
Query: 471 DFSEFVA 477
DF EF+
Sbjct: 63 DFDEFLK 69
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Score = 34.1 bits (78), Expect = 0.004
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 7/74 (9%)
Query: 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 511
E + + D N DG +D E L + + D + DG
Sbjct: 8 EEELANCFRIFDKNADGFIDIEELG------EILRATGEHVIEEDIEDLMKDSDKNNDGR 61
Query: 512 ITPEE-LRMHTGLK 524
I +E L+M G++
Sbjct: 62 IDFDEFLKMMEGVQ 75
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 52.1 bits (125), Expect = 2e-09
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 471
EL + +++ A + +S EE++Q + + P LK R L ++ Q +D N DG V
Sbjct: 7 AELKSIFEKYAAKE-GDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 472 FSEFVAATLHVHQ 484
F EF + Q
Sbjct: 66 FEEFQVLVKKISQ 78
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Score = 40.6 bits (95), Expect = 2e-05
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 498 QAAFEKFDI--DRDGFITPEELR--MHTGLKG------SIDPLLEEADIDKDGRISLSEF 547
++ FEK+ ++ EEL+ + ++D L +E D + DG +S EF
Sbjct: 10 KSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEF 69
Query: 548 RRLLR 552
+ L++
Sbjct: 70 QVLVK 74
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 3e-09
Identities = 17/148 (11%), Positives = 33/148 (22%), Gaps = 30/148 (20%)
Query: 425 IDVDKNGSISLEEMRQALAKD-LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 483
+ ++ G I ++ Q D + S D + + + +
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 75
Query: 484 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----------------- 526
E F + ++T E L K
Sbjct: 76 PRPE---------IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQV 126
Query: 527 ---IDPLLEEADIDKDGRISLSEFRRLL 551
ID + G++S L
Sbjct: 127 QGLIDKYEPSGINAQRGQLSPEGMVWFL 154
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 53.5 bits (127), Expect = 3e-09
Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 17/149 (11%)
Query: 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 469
L +++ ++++ F IDVD++G +S E+++ + + A+ G
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKEL-----TAMLKEAPGP 55
Query: 470 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------MHTGL 523
++F+ F ++ + AF FD + E ++
Sbjct: 56 LNFTMF-----LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN 110
Query: 524 KGSIDPLLEEADIDKDGRISLSEFRRLLR 552
K + +EA ++ G+ +F +++
Sbjct: 111 KDEMRMTFKEAPVE-GGKFDYVKFTAMIK 138
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.6 bits (127), Expect = 3e-09
Identities = 17/140 (12%), Positives = 42/140 (30%), Gaps = 6/140 (4%)
Query: 418 LRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEF 475
+D F D G+I+ + + L P ++ ++ + +D
Sbjct: 4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63
Query: 476 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE-ELRMHTGLKGS---IDPLL 531
+ ++ + + + G K + +D LL
Sbjct: 64 LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123
Query: 532 EEADIDKDGRISLSEFRRLL 551
+ ++D +G I +F +
Sbjct: 124 KGVEVDSNGEIDYKKFIEDV 143
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 53.1 bits (126), Expect = 6e-09
Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 10/151 (6%)
Query: 410 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 467
L +E+ DL+D F+ D G++ ++ + L + V + +
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAV-GGTHKMGE 58
Query: 468 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 526
+ F EF+ A + E+ + + F++ + G + S
Sbjct: 59 KSLPFEEFLPAYEGLMDCEQGTFADYMEAFK-TFDREGQGFISGAELRHVLTALGERLSD 117
Query: 527 --IDPLLEEADI--DKDGRISLSEFRRLLRT 553
+D +++ D+ D +G + +F + +
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 53.4 bits (127), Expect = 6e-09
Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 25/151 (16%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQAIDCN 465
EE+ R F + + +S E+ L K + ++ +D +
Sbjct: 1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59
Query: 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----MH 520
T G + F EF + QA +++FD+DR G I EL
Sbjct: 60 TTGKLGFEEF------------KYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107
Query: 521 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 551
L + ++ D+ G + F L
Sbjct: 108 FHLNEHLYSMIIRRYSDEGGNMDFDNFISCL 138
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Score = 49.5 bits (117), Expect = 1e-07
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Query: 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 478
+ + DVD++G+I E+ A + + L E I++ G +DF F++
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAF-EAAGFHLNEHLYSMIIRRYSDE-GGNMDFDNFISC 137
Query: 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 513
+ + + AF+ D D G I
Sbjct: 138 LVRLDAMFR------------AFKSLDKDGTGQIQ 160
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.8 bits (121), Expect = 1e-08
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 15/83 (18%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK---------------DLPWKLKESRVL 456
D + + F D++ +G + +E+ K + +
Sbjct: 12 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71
Query: 457 EILQAIDCNTDGLVDFSEFVAAT 479
+++ +D N D LV EF+A+T
Sbjct: 72 HVMKNVDTNQDRLVTLEEFLAST 94
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.1 bits (114), Expect = 9e-08
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 24/92 (26%)
Query: 483 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----------------------MH 520
+L+ D +++ + F DI+ DG + +EL M
Sbjct: 6 EELDGLDPNRFNPK--TFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 63
Query: 521 TGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552
+ +++ D ++D ++L EF +
Sbjct: 64 EERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.0 bits (123), Expect = 2e-08
Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 24/164 (14%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 466
A+ + + L + F +D D++G IS E++QAL+ V I+ D
Sbjct: 10 AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69
Query: 467 DGLVD------------------------FSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 502
V+ S + L
Sbjct: 70 KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129
Query: 503 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSE 546
KFD G I ++ + + + D D+DG I +S
Sbjct: 130 KFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSY 173
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 50.0 bits (119), Expect = 2e-08
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTD 467
+ + + F DK G ++ E++R + K+ P + V +I++ +D D
Sbjct: 5 EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63
Query: 468 GLVDFSEFVA 477
G V F F +
Sbjct: 64 GKVGFQSFFS 73
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Score = 38.0 bits (88), Expect = 3e-04
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 12/64 (18%)
Query: 499 AAFEKFDIDRDGFITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLSEF 547
F KF D G++T E+LR + ++D ++++ D +DG++ F
Sbjct: 13 FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSF 71
Query: 548 RRLL 551
L+
Sbjct: 72 FSLI 75
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 48.7 bits (116), Expect = 4e-08
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 413 EELADLRDQFDA-IDVDKNGSI-SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 470
+ L + D + + N +++++ L + P +++ + +D NTDG V
Sbjct: 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66
Query: 471 DFSEFVA 477
+F EF+
Sbjct: 67 NFQEFLI 73
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Score = 35.2 bits (81), Expect = 0.002
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Query: 499 AAFEKF-DIDRDGFI-TPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 549
+ K+ I + ++L+ K D +E DI+ DG ++ EF
Sbjct: 14 DVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLI 73
Query: 550 LL 551
L+
Sbjct: 74 LV 75
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 50.0 bits (118), Expect = 5e-08
Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 9/142 (6%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 472
+ + + F D G I + DL ++ L + I+ VD
Sbjct: 2 TDDSPYKQAFSLFDRHGTGRIPKTSI-----GDLLRACGQNPTLAEITEIESTLPAEVDM 56
Query: 473 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS---IDP 529
+F+ + + + ++ F+K G + G K S +D
Sbjct: 57 EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDE 116
Query: 530 LLEEADIDKDGRISLSEFRRLL 551
LL+ + DG ++ +F +++
Sbjct: 117 LLKGVPVK-DGMVNYHDFVQMI 137
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.7 bits (113), Expect = 6e-08
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 476
++R+ F D D NG IS E+R +L KL + V E+++ D + DG V++ EFV
Sbjct: 4 EIREAFRVFDKDGNGYISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 62
Query: 477 A 477
Sbjct: 63 Q 63
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.0 bits (106), Expect = 5e-07
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 551
+ AF FD D +G+I+ ELR G +D ++ EADID DG+++ EF +++
Sbjct: 6 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.6 bits (110), Expect = 1e-07
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 476
D F D + G +S+ ++R L L KL ++ V E+L+ ++ +++G +D+ +F+
Sbjct: 2 DFVKAFQVFDKESTGKVSVGDLRYML-TGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.2 bits (96), Expect = 1e-05
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 498 QAAFEKFDIDRDGFITPE---ELRMHTGLKGS---IDPLLEEADIDKDGRISLSEF 547
AF+ FD + G ++ + G K + +D LL+ ++D +G I +F
Sbjct: 4 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 59
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Score = 47.3 bits (112), Expect = 2e-07
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQ 460
++T + + + D F ++ I + + ++ P K + + ++ +
Sbjct: 1 SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59
Query: 461 AIDCNTDGLVDFSEFV 476
D N D +DFSEF+
Sbjct: 60 KKDKNEDKKIDFSEFL 75
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 46.4 bits (110), Expect = 3e-07
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLPW----KLKESRVLEIL 459
A L+ + L + F K G ++ E+++ L ++LP + E+ +++
Sbjct: 1 ACPLE-KALDVMVSTFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLM 58
Query: 460 QAIDCNTDGLVDFSEFVA 477
+D N D VDF E+
Sbjct: 59 SNLDSNRDNEVDFQEYCV 76
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Score = 38.7 bits (90), Expect = 1e-04
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 15/72 (20%)
Query: 499 AAFEKFDIDRDG---FITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISL 544
+ F K+ ++G + EL+ + + L+ D ++D +
Sbjct: 13 STFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDF 71
Query: 545 SEFRRLLRTASI 556
E+ L ++
Sbjct: 72 QEYCVFLSCIAM 83
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.7 bits (108), Expect = 3e-07
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCNTDGLV 470
EE+ + F A + D IS EE++ + S + E+++ +D N DG V
Sbjct: 4 PEEIKGAFEVFAAKEGD-PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 471 DFSEFVA 477
F EF+
Sbjct: 63 SFEEFLV 69
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Query: 498 QAAFEKFDID--RDGFITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 547
+ AFE F I+ EEL+ ++D ++EE D + DG +S EF
Sbjct: 8 KGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEF 67
Query: 548 RRLLRTAS 555
+++ S
Sbjct: 68 LVMMKKIS 75
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 45.3 bits (107), Expect = 8e-07
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 413 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGL 469
E + + F A + S+S+ E ++ + + LP LK+ L E ++++D N D
Sbjct: 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70
Query: 470 VDFSEFVA 477
+ F+E+
Sbjct: 71 LKFNEYWR 78
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Score = 35.6 bits (82), Expect = 0.002
Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Query: 499 AAFEKFDIDRDG---FITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 547
F F ++G ++ E + GS+D ++ D+++D + +E+
Sbjct: 18 TTFFTFA-RQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEY 76
Query: 548 RRLL 551
RL+
Sbjct: 77 WRLI 80
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Score = 47.0 bits (110), Expect = 1e-06
Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 25/162 (15%)
Query: 407 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEIL 459
A ++D + +L + F A+D D +G+IS+ E+ AL+ KL
Sbjct: 11 ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68
Query: 460 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD-------------- 505
I + + + D +AA
Sbjct: 69 GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 128
Query: 506 --IDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS 545
R G + ++ + + + D ++ G+++ +
Sbjct: 129 FDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFT 170
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 44.4 bits (105), Expect = 1e-06
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 412 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLP----WKLKESRVLEILQAIDC 464
++ +A + F + G + E+++ L K+L + +E + + +D
Sbjct: 5 EQAVAAIVCTFQEYA-GRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 63
Query: 465 NTDGLVDFSEFVA 477
N D VDF E+V
Sbjct: 64 NKDCEVDFVEYVR 76
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Score = 35.6 bits (82), Expect = 0.002
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 13/66 (19%)
Query: 499 AAFEKF-DIDRDGF-ITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLS 545
F+++ D + + EL+ + + + D +KD +
Sbjct: 13 CTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFV 72
Query: 546 EFRRLL 551
E+ R L
Sbjct: 73 EYVRSL 78
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 43.0 bits (101), Expect = 4e-06
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDG 468
E L ++ + DK +S +E++ L +L + V +I++ +D N DG
Sbjct: 9 ETLINVFHAHSGKEGDK-YKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67
Query: 469 LVDFSEFVA 477
VDF EFV
Sbjct: 68 EVDFQEFVV 76
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Score = 36.5 bits (84), Expect = 0.001
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 15/67 (22%)
Query: 499 AAFEKFDIDRDG---FITPEELRMHTGLKGS-----------IDPLLEEADIDKDGRISL 544
F ++G ++ +EL+ + S +D +++E D + DG +
Sbjct: 13 NVFHAHS-GKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDF 71
Query: 545 SEFRRLL 551
EF L+
Sbjct: 72 QEFVVLV 78
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 5e-06
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 476
+ +F+ D K +IS EE R + L + + + + N G + + +F+
Sbjct: 21 AITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 79
Query: 477 AA 478
+
Sbjct: 80 SR 81
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.7 bits (79), Expect = 0.003
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 7/74 (9%)
Query: 484 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPLLEEA---DID 537
+L + + +H FE FD + I+ EE R + + ++
Sbjct: 10 RLHKAVTSHYH-AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVN 68
Query: 538 KDGRISLSEFRRLL 551
GR+ +F
Sbjct: 69 AKGRLKYPDFLSRF 82
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.3 bits (99), Expect = 1e-05
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ E+ A FD++ NG +S ++++ L KL + + + D + DG
Sbjct: 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 58
Query: 469 LVDFSEFVAA 478
++D EF A
Sbjct: 59 MLDRDEFAVA 68
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.8 bits (95), Expect = 3e-05
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ E A + F D D +G +S E+R+ L L + + I D G
Sbjct: 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIF---LKTGLPSTLLAHIWSLCDTKDCG 59
Query: 469 LVDFSEFVAATLHVHQ 484
+ +F A + Q
Sbjct: 60 KLSKDQFALAFHLISQ 75
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 2e-04
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE----EADIDKDGRISLSEF---RRL 550
F K D D DGF++ E+R G LL D G++S +F L
Sbjct: 13 DEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72
Query: 551 LRTASISSRNVPPS 564
+ I + P
Sbjct: 73 ISQKLIKGIDPPHV 86
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Score = 39.8 bits (93), Expect = 5e-05
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 412 DEELADLRDQFDA-IDVDKNG-SISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTD 467
D+ + L F + + ++S +E+++ + K+ + KL+++ + +++ +D N D
Sbjct: 5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64
Query: 468 GLVDFSEFVA 477
V+F E+V
Sbjct: 65 QEVNFQEYVT 74
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Score = 39.4 bits (92), Expect = 9e-05
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 412 DEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCN 465
+E L + + F ++ ++S E++Q L K+L ++ + EI Q +D N
Sbjct: 4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63
Query: 466 TDGLVDFSEFV 476
D VDF EF+
Sbjct: 64 QDEQVDFQEFI 74
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Score = 38.6 bits (90), Expect = 2e-04
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 468
E L + + D + IS E + +L + + + +++ +D ++DG
Sbjct: 9 ESLIAIFQKHAGRDGNNT-KISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 67
Query: 469 LVDFSEFV 476
+DF EF+
Sbjct: 68 QLDFQEFL 75
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Score = 38.6 bits (90), Expect = 2e-04
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 468
L D+ Q+ + DK+ + E+++ + +L L+E + V ++++ +D + DG
Sbjct: 9 VALIDVFHQYSGREGDKH-KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDG 67
Query: 469 LVDFSEFV 476
DF EF+
Sbjct: 68 ECDFQEFM 75
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.5 bits (89), Expect = 2e-04
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 468
+ DE+ +QF I D NG I ++ K KL + I + D + DG
Sbjct: 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58
Query: 469 LVDFSEFVAA 478
+ EF AA
Sbjct: 59 ALTLDEFCAA 68
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.5 bits (89), Expect = 2e-04
Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 498 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRT 553
+ + + + G + + G D +L + AD D G +S EF LR
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73
Query: 554 ASISSRNVPPSPS 566
+ + + S S
Sbjct: 74 VACAQNGLEVSLS 86
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} Length = 151 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 3e-04
Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 481 HVHQLEEHDSEKWHLRSQAA----FEKFDIDR-DGFITPEEL----RMHTGLKGSIDPLL 531
H +L D EK + F + D DG+++ EL ++
Sbjct: 59 HPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFF 118
Query: 532 EEADIDKDGRISLSEF 547
E D+D D I+L E+
Sbjct: 119 ETCDLDNDKYIALDEW 134
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Score = 37.0 bits (86), Expect = 6e-04
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 424 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 476
+ +++ E++ + K+LP L+ + V ++L+ +D N D VDFSEF+
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Score = 35.0 bits (81), Expect = 0.002
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 428 DKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 476
+++ E ++ + KDL LK E + I++ +D N D + F EF+
Sbjct: 24 GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 77
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Score = 33.0 bits (76), Expect = 0.004
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 500 AFEKFDIDRDGFITPEELR 518
AF FD D +G+I+ ELR
Sbjct: 8 AFRVFDKDGNGYISAAELR 26
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 574 | |||
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.93 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 99.87 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.86 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 99.86 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.86 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.85 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.85 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 99.85 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 99.84 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 99.84 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.83 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 99.83 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.83 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 99.82 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 99.82 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.8 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.78 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.78 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 99.78 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.77 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.77 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.77 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.76 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.76 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 99.75 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.74 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 99.73 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.72 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.72 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 99.71 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.7 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.7 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 99.7 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 99.69 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 99.68 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.68 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.67 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.64 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.57 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.55 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 99.51 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.47 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.46 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.45 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.45 | |
| d1df0a1 | 186 | Calpain large subunit, C-terminal domain (domain I | 99.44 | |
| d1hqva_ | 181 | Apoptosis-linked protein alg-2 {Mouse (Mus musculu | 99.44 | |
| d1k94a_ | 165 | Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | 99.44 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.43 | |
| d1alva_ | 173 | Calpain small (regulatory) subunit (domain VI) {Pi | 99.43 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.43 | |
| d1juoa_ | 172 | Sorcin {Human (Homo sapiens) [TaxId: 9606]} | 99.38 | |
| d1y1xa_ | 182 | Programmed cell death 6 protein-like protein {Leis | 99.36 | |
| d1fpwa_ | 190 | Frequenin (neuronal calcium sensor 1) {Baker's yea | 99.36 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.34 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.33 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.33 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.33 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.31 | |
| d1qxpa2 | 188 | Calpain large subunit, C-terminal domain (domain I | 99.31 | |
| d1jc2a_ | 75 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.3 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.3 | |
| d1fi5a_ | 81 | Troponin C {Chicken (Gallus gallus), cardiac isofo | 99.29 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.29 | |
| d1fw4a_ | 65 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.29 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.29 | |
| d1c7va_ | 68 | Calcium vector protein {Amphioxus (Branchiostoma l | 99.27 | |
| d1oqpa_ | 77 | Caltractin (centrin 2) {Green algae (Chlamydomonas | 99.26 | |
| d1tiza_ | 67 | Calmodulin-related protein T21P5.17 {Thale cress ( | 99.25 | |
| d1avsa_ | 81 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 99.25 | |
| d2opoa1 | 81 | Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta | 99.24 | |
| d2fcea1 | 61 | Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | 99.22 | |
| d1jbaa_ | 189 | Guanylate cyclase activating protein 2, GCAP-2 {Co | 99.22 | |
| d2pq3a1 | 73 | Calmodulin {Rattus norvegicus [TaxId: 10116]} | 99.21 | |
| d1f54a_ | 77 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 99.21 | |
| d1xo5a_ | 180 | Calcium- and integrin-binding protein, CIB {Human | 99.2 | |
| d1wrka1 | 82 | Troponin C {Human (Homo sapiens), cardiac isoform | 99.2 | |
| d1g8ia_ | 187 | Frequenin (neuronal calcium sensor 1) {Human (Homo | 99.19 | |
| d1s6ja_ | 87 | Calcium-dependent protein kinase sk5 CLD {Soybean | 99.17 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.15 | |
| d1pvaa_ | 109 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.15 | |
| d2zfda1 | 183 | Calcineurin B-like protein 2 {Thale cress (Arabido | 99.14 | |
| d1jfja_ | 134 | EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: | 99.14 | |
| d1s6ca_ | 178 | Kchip1, Kv4 potassium channel-interacting protein | 99.13 | |
| d1omra_ | 201 | Recoverin {Cow (Bos taurus) [TaxId: 9913]} | 99.13 | |
| d5pala_ | 109 | Parvalbumin {Leopard shark (Triakis semifasciata) | 99.11 | |
| d1bjfa_ | 181 | Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | 99.07 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 99.07 | |
| d1rwya_ | 109 | Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | 99.06 | |
| d2pvba_ | 107 | Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | 99.05 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 99.04 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 99.04 | |
| d1auib_ | 165 | Calcineurin regulatory subunit (B-chain) {Human (H | 99.03 | |
| d1qx2a_ | 76 | Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | 99.01 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 99.0 | |
| d1rroa_ | 108 | Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116 | 98.98 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.98 | |
| d1exra_ | 146 | Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI | 98.97 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.97 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.95 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.94 | |
| d1zfsa1 | 93 | Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 | 98.93 | |
| d1yuta1 | 98 | Calcyclin (S100) {Human (Homo sapiens), s100a13 [T | 98.93 | |
| d1cb1a_ | 78 | Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | 98.93 | |
| d1a4pa_ | 92 | Calcyclin (S100) {Human (Homo sapiens), P11 s100a1 | 98.92 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.9 | |
| d1wlza1 | 83 | DJ-1-binding protein, DJBP {Human (Homo sapiens) [ | 98.9 | |
| d1c07a_ | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.9 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.9 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.89 | |
| d1ksoa_ | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta | 98.89 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.88 | |
| d3c1va1 | 93 | Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta | 98.88 | |
| d1xk4a1 | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.86 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.85 | |
| d1fi6a_ | 92 | Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | 98.84 | |
| d2obha1 | 141 | Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | 98.84 | |
| d2mysc_ | 145 | Myosin Regulatory Chain {Chicken (Gallus gallus) [ | 98.81 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.8 | |
| d1wdcb_ | 142 | Myosin Essential Chain {Bay scallop (Aequipecten i | 98.79 | |
| d1dtla_ | 156 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.79 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.77 | |
| d1snla_ | 99 | Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax | 98.77 | |
| d1k8ua_ | 89 | Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta | 98.76 | |
| d1topa_ | 162 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.76 | |
| d1m45a_ | 146 | Myosin Light Chain Mlc1p {Baker's yeast (Saccharom | 98.76 | |
| d1psra_ | 100 | Calcyclin (S100) {Human (Homo sapiens), psoriasin | 98.76 | |
| d1ggwa_ | 140 | Cdc4p {Fission yeast (Schizosaccharomyces pombe) [ | 98.75 | |
| d1qv0a_ | 189 | Calcium-regulated photoprotein {Hydrozoa (Obelia l | 98.74 | |
| d1iq3a_ | 110 | Pob1 {Human (Homo sapiens) [TaxId: 9606]} | 98.72 | |
| d1lkja_ | 146 | Calmodulin {Baker's yeast (Saccharomyces cerevisia | 98.71 | |
| d2jxca1 | 95 | Eps15 {Human (Homo sapiens) [TaxId: 9606]} | 98.71 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.7 | |
| d2mysb_ | 145 | Myosin Essential Chain {Chicken (Gallus gallus) [T | 98.69 | |
| d2scpa_ | 174 | Sarcoplasmic calcium-binding protein {Sandworm (Ne | 98.69 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.68 | |
| d1uhka1 | 187 | Calcium-regulated photoprotein {Jellyfish (Aequore | 98.67 | |
| d1s6ia_ | 182 | Calcium-dependent protein kinase sk5 CLD {Soybean | 98.67 | |
| d1e8aa_ | 87 | Calcyclin (S100) {Human (Homo sapiens), calgranuli | 98.66 | |
| d2sasa_ | 185 | Sarcoplasmic calcium-binding protein {Amphioxus (B | 98.66 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.65 | |
| d1w7jb1 | 139 | Myosin Essential Chain {Human (Homo sapiens) [TaxI | 98.64 | |
| d1wdcc_ | 152 | Myosin Regulatory Chain {Bay scallop (Aequipecten | 98.62 | |
| d1qjta_ | 99 | Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | 98.57 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.57 | |
| d1nyaa_ | 176 | Calerythrin {Saccharopolyspora erythraea [TaxId: 1 | 98.5 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.4 | |
| d2zkmx1 | 170 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 98.29 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.27 | |
| d3cr5x1 | 90 | Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: | 98.26 | |
| d1ij5a_ | 321 | Cbp40 (plasmodial specific CaII-binding protein LA | 98.23 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 98.19 | |
| d2hf5a1 | 33 | Troponin C {Human (Homo sapiens), cardiac isoform | 98.17 | |
| d1qlsa_ | 95 | Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1 | 98.15 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.09 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.09 | |
| d1j55a_ | 94 | Calcyclin (S100) {Human (Homo sapiens), s100p [Tax | 98.08 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 98.05 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 98.01 | |
| d1xk4c1 | 83 | Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr | 97.99 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.94 | |
| d1ctda_ | 34 | Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | 97.88 | |
| d1tuza_ | 118 | Diacylglycerol kinase alpha, N-terminal domain {Hu | 97.54 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 97.13 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.11 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.99 | |
| d1sraa_ | 151 | C-terminal (EC) domain of BM-40/SPARC/osteonectin | 96.48 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 95.7 | |
| d1j7qa_ | 86 | Calcium vector protein {Amphioxus (Branchiostoma l | 94.58 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 92.39 | |
| d1h8ba_ | 73 | alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | 90.2 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 89.43 | |
| d2cclb1 | 59 | Endo-1,4-beta-xylanase Y {Clostridium thermocellum | 89.14 | |
| d1qasa1 | 94 | Phosphoinositide-specific phospholipase C, isozyme | 88.19 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 86.22 | |
| d1dava_ | 71 | Cellulosome endoglucanase SS {Clostridium thermoce | 85.01 | |
| d1pula1 | 103 | Hypothetical protein c32e8.3 {Caenorhabditis elega | 83.18 |
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.2e-62 Score=486.66 Aligned_cols=290 Identities=38% Similarity=0.676 Sum_probs=231.4
Q ss_pred ccccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 91 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
.+++.++|++++.||+|+||+||+|+++.+|+.||||++.+... ......+.+|+.+|+.| +|||
T Consensus 4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--------------~~~~~~~~~Ei~il~~l-~Hpn 68 (307)
T d1a06a_ 4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--------------EGKEGSMENEIAVLHKI-KHPN 68 (307)
T ss_dssp CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------------------CHHHHHHHTC-CCTT
T ss_pred CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh--------------hhHHHHHHHHHHHHHhC-CCCC
Confidence 34577889999999999999999999999999999999976521 11234678999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCC
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 250 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~ 250 (574)
||++++++.+++.+|||||||+||+|.+++. ..+.+++..+..++.||+.||.|||++|||||||||+|||+....++
T Consensus 69 Iv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~ 146 (307)
T d1a06a_ 69 IVALDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDED 146 (307)
T ss_dssp BCCEEEEEECSSEEEEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTT
T ss_pred CCcEEEEEEECCEEEEEEeccCCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCC
Confidence 9999999999999999999999999999884 45689999999999999999999999999999999999999865567
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
+.+||+|||+|+.........+.+||+.|+|||++.+. ++.++|||||||++|+|++|++||.+....+....+.....
T Consensus 147 ~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~ 226 (307)
T d1a06a_ 147 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY 226 (307)
T ss_dssp CCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC
T ss_pred ceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC
Confidence 89999999999987766666778999999999998764 68999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCCccHHHHHHHHhhhhhhhh
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRL 398 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~~~~~~l~~l~~~~~~s~l 398 (574)
.++.+.++.+|+++.+||.+||.+||.+|||+.|+|+||||+..... ...........+++....+++
T Consensus 227 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 294 (307)
T d1a06a_ 227 EFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTAL-DKNIHQSVSEQIKKNFAKSKW 294 (307)
T ss_dssp CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSCCC-CCCCHHHHHHHHHHHSCCCTT
T ss_pred CCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCCcc-ccccchhHHHHHHHHHHHhhh
Confidence 87777788999999999999999999999999999999999864322 223333444445544333333
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-61 Score=465.27 Aligned_cols=255 Identities=29% Similarity=0.574 Sum_probs=227.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+.... .....+.+.+|+.+|+.+ +|||||+++
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~------------~~~~~~~~~~E~~il~~l-~hpnIv~~~ 72 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE------------KAGVEHQLRREVEIQSHL-RHPNILRLY 72 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHcc------------ChHHHHHHHHHHHHHHhc-CCCCCCeEE
Confidence 4699999999999999999999999999999999764211 123456788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|||||||+||+|.+++.. ...+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 73 ~~~~~~~~~~ivmEy~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~~kl 147 (263)
T d2j4za1 73 GYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKI 147 (263)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEEECCEEEEEEeecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec---CCCCEee
Confidence 999999999999999999999998854 35799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||+|...... .....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus 148 ~DFG~a~~~~~~-~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p-- 224 (263)
T d2j4za1 148 ADFGWSVHAPSS-RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP-- 224 (263)
T ss_dssp CCCCSCSCCCCC-CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC--
T ss_pred cccceeeecCCC-cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--
Confidence 999999876543 34567899999999999875 58899999999999999999999999998889888888765443
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+.+|+++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus 225 --~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~ 261 (263)
T d2j4za1 225 --DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 261 (263)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred --ccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence 4589999999999999999999999999999999853
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-61 Score=468.36 Aligned_cols=258 Identities=33% Similarity=0.575 Sum_probs=218.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++++.||+|+||+||+|+++.+|+.||||++..... ....+.+.+|+.+|+.+ +|||||++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--------------~~~~~~~~~Ei~~l~~l-~HpnIv~~ 68 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--------------VDCPENIKKEICINKML-NHENVVKF 68 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------------------CHHHHHHHHHTC-CCTTBCCE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--------------chHHHHHHHHHHHHHhC-CCCCEeeE
Confidence 4579999999999999999999999999999999976421 12335688999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+++.+|||||||+||+|.+++ .....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+|
T Consensus 69 ~~~~~~~~~~~ivmEy~~gg~L~~~l--~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~K 143 (271)
T d1nvra_ 69 YGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLK 143 (271)
T ss_dssp EEEEEETTEEEEEEECCTTEEGGGGS--BTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEE
T ss_pred eeeeccCceeEEEEeccCCCcHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEE
Confidence 99999999999999999999999987 4456899999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCC---CCccccccCccccchHhhhcC-C-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 255 ATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 255 l~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
|+|||+|+..... ......+||+.|+|||++.+. + +.++|||||||++|+|++|++||.................
T Consensus 144 L~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~ 223 (271)
T d1nvra_ 144 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223 (271)
T ss_dssp ECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTC
T ss_pred EccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC
Confidence 9999999876432 224567899999999998765 3 5679999999999999999999977655443333333332
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
. ....++.+|+++.+||.+||+.||.+|||++++|+||||++.
T Consensus 224 ~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 224 T-YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp T-TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred C-CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 2 334467789999999999999999999999999999999864
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-59 Score=463.76 Aligned_cols=257 Identities=28% Similarity=0.491 Sum_probs=224.2
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++.+.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.+ +|||||++
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~---------------~~~~~~~~~E~~il~~l-~HpnIv~~ 82 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---------------QPKKELIINEILVMREN-KNPNIVNY 82 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG---------------CSCHHHHHHHHHHHHHC-CCTTBCCE
T ss_pred ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc---------------ChHHHHHHHHHHHHHhC-CCCCEeeE
Confidence 357999999999999999999999999999999987542 12346789999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++|.+++.+|||||||+||+|.+++.. ..+++..++.++.||+.||.|||++|||||||||+|||++ .++.+|
T Consensus 83 ~~~~~~~~~~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vk 156 (293)
T d1yhwa1 83 LDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVK 156 (293)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEE
T ss_pred eEEEEECCEEEEEEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEe
Confidence 9999999999999999999999986632 4699999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCC-CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||+|+.+... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+.......+...... .
T Consensus 157 l~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~ 235 (293)
T d1yhwa1 157 LTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-E 235 (293)
T ss_dssp ECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-C
T ss_pred eccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-C
Confidence 9999999876543 344567899999999998765 588999999999999999999999988877777766655432 2
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
...++.+|+++++||.+||..||.+|||+.|+|+||||+...
T Consensus 236 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~~ 277 (293)
T d1yhwa1 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277 (293)
T ss_dssp CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCC
Confidence 223457899999999999999999999999999999998543
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-59 Score=467.02 Aligned_cols=270 Identities=36% Similarity=0.623 Sum_probs=238.0
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+++.++|++++.||+|+||+||+|+++.+|+.||||++.+.... ........+.+.+|+.+|++| +||||
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~---------~~~~~~~~~~~~~E~~il~~l-~HpnI 75 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK---------SSRRGVSREDIEREVSILKEI-QHPNV 75 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSST---------TCSSSBCHHHHHHHHHHHHHC-CCTTB
T ss_pred CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcc---------hhhhhHHHHHHHHHHHHHHhC-CCCCC
Confidence 34667899999999999999999999999999999999765321 011123457899999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC-CC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-ED 250 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~-~~ 250 (574)
|+++++|.+++.+|||||||+||+|.+++... +.+++..++.++.||+.||.|||++|||||||||+|||++..+ ..
T Consensus 76 v~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~ 153 (293)
T d1jksa_ 76 ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 153 (293)
T ss_dssp CCEEEEEECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSS
T ss_pred CcEEEEEEECCEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcc
Confidence 99999999999999999999999999988543 5799999999999999999999999999999999999998532 23
Q ss_pred CCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 251 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 251 ~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
..+||+|||+|............+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 154 ~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~ 233 (293)
T d1jksa_ 154 PRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233 (293)
T ss_dssp CCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC
T ss_pred cceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC
Confidence 46999999999988777777778999999999999764 68999999999999999999999999999999999988877
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.++...++.+|+++++||.+||+.||.+|||+.++|+||||+..
T Consensus 234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred CCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 66655567899999999999999999999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.7e-59 Score=473.80 Aligned_cols=264 Identities=35% Similarity=0.595 Sum_probs=237.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||.||+|+++.+|+.||||++.+.. ....+.+.+|+.+|++| +|||||+
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---------------~~~~~~~~~Ei~il~~l-~HpnIv~ 90 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---------------PLDKYTVKNEISIMNQL-HHPKLIN 90 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---------------HHHHHHHHHHHHHHTTC-CSTTBCC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---------------hhHHHHHHHHHHHHHhC-CCCCCCc
Confidence 4467999999999999999999999999999999987642 12345678999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++|.+++.+|||||||+||+|.+.+.. ...++++..++.++.||+.||.|||++|||||||||+|||++.. .++.+
T Consensus 91 ~~~~~~~~~~~~ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~-~~~~v 168 (352)
T d1koba_ 91 LHDAFEDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSV 168 (352)
T ss_dssp EEEEEECSSEEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCE
T ss_pred EEEEEEECCEEEEEEEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc-CCCeE
Confidence 99999999999999999999999987643 34579999999999999999999999999999999999999742 36799
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
||+|||+|............+||+.|+|||++.+. ++.++|||||||++|+|+||++||.+.+..+.+..+......++
T Consensus 169 kL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~ 248 (352)
T d1koba_ 169 KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 248 (352)
T ss_dssp EECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred EEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 99999999988777767778999999999998765 68899999999999999999999999999999999999888888
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
...++.+|+++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 249 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 249 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 7778899999999999999999999999999999999986543
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=3.4e-59 Score=472.69 Aligned_cols=263 Identities=34% Similarity=0.624 Sum_probs=236.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+-++|++++.||+|+||.||+|+++.+|+.||||++.+.. ....+.+.+|+.+|++| +|||||+
T Consensus 24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---------------~~~~~~~~~E~~il~~l-~HpnIv~ 87 (350)
T d1koaa2 24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---------------ESDKETVRKEIQTMSVL-RHPTLVN 87 (350)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---------------HHHHHHHHHHHHHHHHT-CCTTBCC
T ss_pred CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---------------hhhHHHHHHHHHHHHhC-CCCCCCc
Confidence 4468999999999999999999999999999999997642 12346788999999999 5999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++++|.+++.+|||||||+||+|.+++.. ..+++++..++.++.||+.||.|||++|||||||||+|||++.. .++.+
T Consensus 88 ~~~~~~~~~~~~ivmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~-~~~~v 165 (350)
T d1koaa2 88 LHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNEL 165 (350)
T ss_dssp EEEEEEETTEEEEEECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TSCCE
T ss_pred EEEEEEECCEEEEEEEcCCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC-CCCeE
Confidence 99999999999999999999999998743 34579999999999999999999999999999999999999742 35789
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
||+|||+|+.+.........+||+.|||||++.+. ++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus 166 kL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~ 245 (350)
T d1koaa2 166 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 245 (350)
T ss_dssp EECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC
T ss_pred EEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 99999999988777767778999999999998765 57899999999999999999999999999999999998887777
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
...++.+|+++++||.+||+.||.+|||+.++|+||||+...
T Consensus 246 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 246 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 666778999999999999999999999999999999999754
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.4e-59 Score=456.38 Aligned_cols=269 Identities=32% Similarity=0.594 Sum_probs=237.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
|.++|++.+.||+|+||+||+|+++.+|+.||||++.+...... .........+.+.+|+.+|++|..|||||+
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~------~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~ 74 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF------SAEEVQELREATLKEVDILRKVSGHPNIIQ 74 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTC------CHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccch------hHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 34689999999999999999999999999999999977532110 001112344678899999999966999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++++.+++.+|||||||+||+|.+++.. .+++++..++.++.||+.||+|||++||+||||||+|||++ .++.+
T Consensus 75 ~~~~~~~~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~~ 149 (277)
T d1phka_ 75 LKDTYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNI 149 (277)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCE
T ss_pred EEeecccCcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc---CCCCe
Confidence 99999999999999999999999999854 36799999999999999999999999999999999999998 58899
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc-------CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
||+|||+|+.+.........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+..
T Consensus 150 kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~ 229 (277)
T d1phka_ 150 KLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 229 (277)
T ss_dssp EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHh
Confidence 9999999998877666677899999999998853 247789999999999999999999999999889999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
+...++.+.++.+|+++.+||.+||++||.+|||+.++|+||||++.
T Consensus 230 ~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 230 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 88777777778899999999999999999999999999999999863
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-59 Score=461.36 Aligned_cols=257 Identities=31% Similarity=0.481 Sum_probs=223.9
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.+.|++++.||+|+||+||+|+++.+|+.||||++.+.. ....+.+.+|+++|++| +|||||++
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---------------~~~~~~~~~E~~il~~l-~HpnIv~l 74 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---------------EEELEDYMVEIDILASC-DHPNIVKL 74 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---------------SGGGGGTHHHHHHHHHC-CCTTBCCE
T ss_pred ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---------------HHHHHHHHHHHHHHHhC-CCCCCCeE
Confidence 357999999999999999999999999999999987642 12335678999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
++++.+++.+|||||||+||+|.+++... ..++++..++.++.||+.||.|||++|||||||||+|||++ .++.+|
T Consensus 75 ~~~~~~~~~~~lvmEy~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~K 150 (288)
T d2jfla1 75 LDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIK 150 (288)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEE
T ss_pred EEEEeeCCeEEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEE
Confidence 99999999999999999999999876543 46799999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCC-CCccccccCccccchHhhh------cCCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~------~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
|+|||+|...... ......+||+.|+|||++. ..++.++|||||||++|+|++|++||.+.+..+.+..+...
T Consensus 151 l~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~ 230 (288)
T d2jfla1 151 LADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 230 (288)
T ss_dssp ECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS
T ss_pred EEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence 9999999765322 2234578999999999984 23578999999999999999999999999988898888887
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
..... ...+.+|+++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus 231 ~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 231 EPPTL-AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp CCCCC-SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred CCCCC-CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 64322 223568999999999999999999999999999999975
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-59 Score=461.07 Aligned_cols=256 Identities=34% Similarity=0.578 Sum_probs=223.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+... ......+.+.+|+.+|+++ +|||||+++
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~------------~~~~~~~~~~~E~~il~~l-~HpnIv~l~ 74 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI------------IKENKVPYVTRERDVMSRL-DHPFFVKLY 74 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH------------HHTTCHHHHHHHHHHHHHC-CSTTBCCEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc------------cCHHHHHHHHHHHHHHHHc-CCCCeeEEE
Confidence 469999999999999999999999999999999976421 1123456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+++.+|||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 75 ~~~~~~~~~~ivmEy~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~---~~~~vkl 149 (288)
T d1uu3a_ 75 FTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQI 149 (288)
T ss_dssp EEEECSSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEE
T ss_pred EEEEECCEEEEEEEccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC---CCceEEe
Confidence 999999999999999999999998744 36799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC---CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+.+... ......+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++.++......+
T Consensus 150 ~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~ 229 (288)
T d1uu3a_ 150 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229 (288)
T ss_dssp CCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCC
T ss_pred cccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCC
Confidence 999999876432 233467899999999998764 6889999999999999999999999999999999998876554
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHH------HhcCcccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVREG 373 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~------~l~hp~~~~~ 373 (574)
+ ..+|+++++||.+||+.||.+|||++| +++||||+..
T Consensus 230 p----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 230 P----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp C----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred C----ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 3 468999999999999999999999987 5889999864
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-59 Score=453.94 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=215.8
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNA 177 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~ 177 (574)
|++.+.||+|+||+||+|+++.+++.||||++.... ......+.+.+|+++|+++ +|||||+++++
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~-------------~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~ 76 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK-------------LTKSERQRFKEEAEMLKGL-QHPNIVRFYDS 76 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG-------------SCHHHHHHHHHHHHHHTTC-CCTTBCCEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh-------------CCHHHHHHHHHHHHHHHhC-CCCCeeeEEEE
Confidence 478889999999999999999999999999987642 1223456789999999999 59999999999
Q ss_pred EEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEeecCCCCcEEEccCCCCC
Q 008197 178 FED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 178 ~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--iiHrDlkp~Nill~~~~~~~ 251 (574)
|.+ +..+|||||||+||+|.+++... ..+++..++.++.||+.||.|||+++ ||||||||+|||++. .++
T Consensus 77 ~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~--~~~ 152 (270)
T d1t4ha_ 77 WESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTG 152 (270)
T ss_dssp EEEESSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTS
T ss_pred EeeccccCCEEEEEEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC--CCC
Confidence 875 46789999999999999988543 67999999999999999999999998 999999999999973 467
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcCCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHhCCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPD 330 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~ 330 (574)
.+||+|||+|+.... ......+||+.|+|||++.+.++.++|||||||++|||++|+.||.+.... .++..+..+..
T Consensus 153 ~~Kl~DFGla~~~~~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~- 230 (270)
T d1t4ha_ 153 SVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK- 230 (270)
T ss_dssp CEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-
T ss_pred CEEEeecCcceeccC-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC-
Confidence 899999999986543 334567999999999999999999999999999999999999999776544 44455544322
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
+.......++++.+||.+||+.||++|||+.|+|+||||+
T Consensus 231 -~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 231 -PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp -CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred -CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 1222345789999999999999999999999999999996
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.3e-59 Score=462.93 Aligned_cols=260 Identities=27% Similarity=0.427 Sum_probs=225.4
Q ss_pred cccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 92 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
+++.+.|++++.||+|+||+||+|+++.+|+.||||++.+... ......+.+.+|+.+|++| +||||
T Consensus 11 ~dp~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~------------~~~~~~~~~~~Ei~il~~l-~HpnI 77 (309)
T d1u5ra_ 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK------------QSNEKWQDIIKEVRFLQKL-RHPNT 77 (309)
T ss_dssp SCHHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSS------------CHHHHHHHHHHHHHHHTTC-CCTTB
T ss_pred cCcHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhc------------cCHHHHHHHHHHHHHHHHC-CCCCE
Confidence 3455679999999999999999999999999999999976521 1123456789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
|++++++.+++.+|||||||+||+|...+ ....++++..++.++.||+.||.|||++|||||||||+|||++ .++
T Consensus 78 v~~~~~~~~~~~~~iv~E~~~~g~l~~~~--~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~ 152 (309)
T d1u5ra_ 78 IQYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPG 152 (309)
T ss_dssp CCEEEEEEETTEEEEEEECCSEEHHHHHH--HHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTT
T ss_pred eeEEEEEEECCEEEEEEEecCCCchHHHH--HhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC---CCC
Confidence 99999999999999999999999886554 3346899999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.+||+|||+|..... ....+||+.|+|||++.+ .++.++|||||||++|||++|+.||.+.+....+..+..+
T Consensus 153 ~~Kl~DFG~a~~~~~---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~ 229 (309)
T d1u5ra_ 153 LVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 229 (309)
T ss_dssp EEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred CEEEeecccccccCC---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence 999999999987543 245689999999999853 4688999999999999999999999998888888888776
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
..... ....+|+++.+||.+||+.||.+|||++++|+||||+...
T Consensus 230 ~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~ 274 (309)
T d1u5ra_ 230 ESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (309)
T ss_dssp CCCCC--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred CCCCC--CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence 54332 2346899999999999999999999999999999998643
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-58 Score=463.17 Aligned_cols=256 Identities=30% Similarity=0.527 Sum_probs=228.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+.... .....+.+.+|+.+|+.+ +|||||+++
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~------------~~~~~~~~~~E~~il~~l-~hp~Iv~l~ 71 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII------------AKDEVAHTVTESRVLQNT-RHPFLTALK 71 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH------------HTTCHHHHHHHHHHHHSC-CCTTBCCEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhcc------------CHHHHHHHHHHHHHHHhC-CCCCEEEEE
Confidence 4699999999999999999999999999999999875221 122456788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+++.+|+|||||+||+|.+++.. ...+++..++.++.||+.||+|||++|||||||||+|||++ .++.+||
T Consensus 72 ~~~~~~~~~~iv~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~---~~g~vkl 146 (337)
T d1o6la_ 72 YAFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKI 146 (337)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred eeeccccccccceeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec---CCCCEEE
Confidence 999999999999999999999998754 46799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+.... .......+||+.|+|||++.+ .++.++|||||||++|||++|++||.+.+..+++..+..+...++
T Consensus 147 ~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p- 225 (337)
T d1o6la_ 147 TDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP- 225 (337)
T ss_dssp CCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-
T ss_pred eecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC-
Confidence 99999987543 444567899999999999875 468999999999999999999999999999999999988876554
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
+.+|+++++||.+||++||.+||+ +.++++||||+..
T Consensus 226 ---~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 226 ---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred ---ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 468999999999999999999994 9999999999863
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-58 Score=463.79 Aligned_cols=263 Identities=29% Similarity=0.548 Sum_probs=236.2
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++-++|++++.||+|+||+||+|+++.+|+.||||++++.. .....+.+|+.+|+.+ +|||||
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----------------~~~~~~~~Ei~il~~l-~HpnIv 64 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----------------TDQVLVKKEISILNIA-RHRNIL 64 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----------------HHHHHHHHHHHHHHHS-CCTTBC
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----------------ccHHHHHHHHHHHHhC-CCCCCC
Confidence 35578999999999999999999999999999999997652 1234578999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++|.+++.+|||||||+||+|.+++.. ...++++.+++.++.||+.||.|||++||+||||||+|||++.. ....
T Consensus 65 ~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~-~~~~ 142 (321)
T d1tkia_ 65 HLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSST 142 (321)
T ss_dssp CEEEEEEETTEEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCC
T ss_pred eEEEEEEECCEEEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC-CceE
Confidence 999999999999999999999999998743 23479999999999999999999999999999999999999842 3568
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+||+|||++............+||+.|+|||.+.+. ++.++|||||||++|+|++|..||.+.+..+.+..+......+
T Consensus 143 ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~ 222 (321)
T d1tkia_ 143 IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF 222 (321)
T ss_dssp EEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC
T ss_pred EEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 999999999987766666778999999999988754 5889999999999999999999999999999999999988777
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
+...|+.+|+++++||.+||..||.+|||+.++|+||||++..
T Consensus 223 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 265 (321)
T d1tkia_ 223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCc
Confidence 7777788999999999999999999999999999999998643
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-58 Score=451.12 Aligned_cols=255 Identities=26% Similarity=0.472 Sum_probs=211.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++..... .+...+.+.+|+.+|+++ +|||||+++
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-------------~~~~~~~~~~E~~il~~l-~HpnIv~~~ 69 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-------------TEAEKQMLVSEVNLLREL-KHPNIVRYY 69 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-------------CHHHHHHHHHHHHHTTSC-CCTTBCCEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-------------CHHHHHHHHHHHHHHHHC-CCCCEeeEE
Confidence 479999999999999999999999999999999976521 223456789999999999 599999999
Q ss_pred EEEEc--CCEEEEEEeccCCCchHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEeecCCCCcEEEcc
Q 008197 176 NAFED--DNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFKS 246 (574)
Q Consensus 176 ~~~~~--~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-----iiHrDlkp~Nill~~ 246 (574)
+++.+ .+.+|||||||+||+|.+++.. .....+++..++.++.||+.||.|||+.| ||||||||+|||++
T Consensus 70 ~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~- 148 (269)
T d2java1 70 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD- 148 (269)
T ss_dssp EEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC-
T ss_pred EEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC-
Confidence 99865 5678999999999999998854 23567999999999999999999999976 99999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCC-CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
.++.+||+|||+|+...... .....+||+.|+|||++.+ .++.++|||||||++|||+||+.||.+.+..++...+
T Consensus 149 --~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i 226 (269)
T d2java1 149 --GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 226 (269)
T ss_dssp --TTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred --CCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 47899999999998765433 3456799999999999865 4688999999999999999999999999988888888
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
..+.... ....+|+++.+||.+||+.||.+|||+.|+|+|||+
T Consensus 227 ~~~~~~~---~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 227 REGKFRR---IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred HcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 8765432 224689999999999999999999999999999996
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-57 Score=455.32 Aligned_cols=254 Identities=28% Similarity=0.556 Sum_probs=226.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+... ......+.+.+|+.+|+.+ +|||||+++
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~------------~~~~~~~~~~~E~~il~~l-~HpnIv~~~ 70 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV------------VRLKQVEHTNDERLMLSIV-THPFIIRMW 70 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH------------HHTTCHHHHHHHHHHHHSC-CBTTBCCEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHc------------cCHHHHHHHHHHHHHHHhc-cCcChhhee
Confidence 369999999999999999999999999999999976521 1123456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+|||||+||+|...+. ....+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 71 ~~~~~~~~~~ivmE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~---~~g~vkL 145 (316)
T d1fota_ 71 GTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKI 145 (316)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEE
T ss_pred eeEeeCCeeeeEeeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc---CCCCEEE
Confidence 99999999999999999999988774 446789999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||+|+..... ....+||+.|+|||++.+. ++.++|||||||++|+|++|+.||.+.+..+++..+..+...++
T Consensus 146 ~DFG~a~~~~~~--~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p-- 221 (316)
T d1fota_ 146 TDFGFAKYVPDV--TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP-- 221 (316)
T ss_dssp CCCSSCEECSSC--BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC--
T ss_pred ecCccceEeccc--cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC--
Confidence 999999876533 3467999999999999765 68999999999999999999999999999999999988765543
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.+|+++.++|.+||..||.+|+ |++++++||||++.
T Consensus 222 --~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 222 --PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp --TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred --CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 46899999999999999999996 99999999999874
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-58 Score=466.00 Aligned_cols=267 Identities=30% Similarity=0.567 Sum_probs=223.9
Q ss_pred cccceeecc-cccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 94 FDRRYTIGK-LLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 94 ~~~~y~~~~-~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+-++|.+.. .||+|+||+||+|+++.+|+.||||++... ..+.+|+.++.++.+|||||
T Consensus 9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------------------~~~~~E~~~~~~~~~hpnIv 68 (335)
T d2ozaa1 9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------------------PKARREVELHWRASQCPHIV 68 (335)
T ss_dssp GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------------------HHHHHHHHHHHHHTTSTTBC
T ss_pred cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------------------HHHHHHHHHHHHhcCCCCCC
Confidence 345798875 699999999999999999999999998653 34678999987776799999
Q ss_pred eEEEEEEc----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 173 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 173 ~~~~~~~~----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++|.+ ...+|||||||+||+|.+++......++++..++.++.||+.||.|||++||+||||||+|||++...
T Consensus 69 ~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~ 148 (335)
T d2ozaa1 69 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR 148 (335)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred eEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccc
Confidence 99999975 56799999999999999998655456799999999999999999999999999999999999999765
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh-
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR- 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~- 326 (574)
..+.+||+|||+|+...........+||+.|+|||++.+ .++.++|||||||++|+|+||++||.+.+.......+..
T Consensus 149 ~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~ 228 (335)
T d2ozaa1 149 PNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 228 (335)
T ss_dssp TTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------C
T ss_pred ccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHH
Confidence 678899999999998777666677899999999999876 468899999999999999999999987765554444333
Q ss_pred ---CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCCCCCC
Q 008197 327 ---NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 380 (574)
Q Consensus 327 ---~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~~~~ 380 (574)
....++.+.++.+|+++.+||.+||+.||.+|||+.++|+||||++.......+
T Consensus 229 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~~~ 285 (335)
T d2ozaa1 229 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 285 (335)
T ss_dssp CCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSCCCE
T ss_pred HhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCCCCC
Confidence 333444444557899999999999999999999999999999998765544433
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-58 Score=461.30 Aligned_cols=256 Identities=27% Similarity=0.407 Sum_probs=213.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|+.+ +|||||++
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--------------~~~~~~~~~~Ei~il~~l-~HpnIv~l 69 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--------------KPAIRNQIIRELQVLHEC-NSPYIVGF 69 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--------------CTTHHHHHHHHGGGGGGC-CCTTBCCE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--------------CHHHHHHHHHHHHHHHhC-CCCCCCcE
Confidence 468999999999999999999999999999999987541 123456789999999999 59999999
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEeecCCCCcEEEccCCCCCCe
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+++|.+++++|||||||+||+|.+++... +.+++..++.++.||+.||.|||+ +||+||||||+|||++ .++.+
T Consensus 70 ~~~~~~~~~~~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~---~~~~v 144 (322)
T d1s9ja_ 70 YGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEI 144 (322)
T ss_dssp EEEEECSSEEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCE
T ss_pred EEEEEECCEEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC---CCCCE
Confidence 99999999999999999999999988543 579999999999999999999997 5999999999999998 47899
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH---------
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE--------- 323 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~--------- 323 (574)
||+|||+|+..... ...+.+||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.+.......
T Consensus 145 kl~DFGla~~~~~~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 223 (322)
T d1s9ja_ 145 KLCDFGVSGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223 (322)
T ss_dssp EECCCCCCHHHHHH-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------
T ss_pred EEeeCCCccccCCC-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCc
Confidence 99999999865432 2345799999999999876 578999999999999999999999977654322111
Q ss_pred ---------------------------------HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccc
Q 008197 324 ---------------------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 370 (574)
Q Consensus 324 ---------------------------------i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~ 370 (574)
+.... .+..+...+|+++.+||.+||+.||.+|||++|+|+||||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~ 301 (322)
T d1s9ja_ 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301 (322)
T ss_dssp ----------------------CCCCHHHHHHHHHTSC--CCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ccCCcccccccccccccccccccchhHHHHHhhhhccC--CccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhh
Confidence 00000 0011112367899999999999999999999999999999
Q ss_pred ccc
Q 008197 371 REG 373 (574)
Q Consensus 371 ~~~ 373 (574)
++.
T Consensus 302 ~~~ 304 (322)
T d1s9ja_ 302 KRS 304 (322)
T ss_dssp HHH
T ss_pred CcC
Confidence 864
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.4e-57 Score=455.89 Aligned_cols=254 Identities=28% Similarity=0.502 Sum_probs=226.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+... ......+.+.+|+.+|+.+ +|||||+++
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~------------~~~~~~~~~~~E~~il~~l-~hpnIv~~~ 107 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV------------VKLKQIEHTLNEKRILQAV-NFPFLVKLE 107 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH------------HHTTCHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc------------cCHHHHHHHHHHHHHHHHc-CCCcEeecc
Confidence 479999999999999999999999999999999976421 1123456789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+.+.+++||||+.||+|.+.+... +.+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 108 ~~~~~~~~~~~v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~---~~g~ikL 182 (350)
T d1rdqe_ 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQV 182 (350)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEE
T ss_pred cccccccccccccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC---CCCCEEe
Confidence 9999999999999999999999988544 5799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC
Q 008197 256 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 334 (574)
Q Consensus 256 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~ 334 (574)
+|||+|+.+... ....+||+.|||||++.+. ++.++|||||||++|+|+||+.||.+.+...++..+..+...++
T Consensus 183 ~DFG~a~~~~~~--~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p-- 258 (350)
T d1rdqe_ 183 TDFGFAKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP-- 258 (350)
T ss_dssp CCCTTCEECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--
T ss_pred eeceeeeecccc--cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC--
Confidence 999999877533 3467899999999998765 58899999999999999999999999998889999988765443
Q ss_pred CCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 335 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 335 ~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
+.+|+++.+||.+||..||.+|+ |++++++||||+..
T Consensus 259 --~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 259 --SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp --TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred --ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 56899999999999999999995 99999999999864
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-56 Score=449.06 Aligned_cols=257 Identities=28% Similarity=0.495 Sum_probs=224.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++.+... ......+.+..|..++.+..+|||||+++
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~------------~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~ 69 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV------------LMDDDVECTMVEKRVLSLAWEHPFLTHMF 69 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH------------HHTTCHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhc------------cChHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 469999999999999999999999999999999976521 11234456778888776433799999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|||||||+||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 70 ~~~~~~~~~yivmEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~---~~~~~kl 144 (320)
T d1xjda_ 70 CTFQTKENLFFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKI 144 (320)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEE
T ss_pred EEEccCCceeEEEeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec---CCCceec
Confidence 999999999999999999999998854 46799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCC-CCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 256 TDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 256 ~DFG~a~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|||+|+.... .......+||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+.+...++..+..+.+.++
T Consensus 145 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p- 223 (320)
T d1xjda_ 145 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP- 223 (320)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC-
T ss_pred cccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-
Confidence 99999986543 333455789999999999876 468899999999999999999999999999999999988765543
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHH-HHhcCcccccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREG 373 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~-~~l~hp~~~~~ 373 (574)
+.+|+++.+||.+||+.||.+|||+. ++++||||++.
T Consensus 224 ---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 224 ---RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp ---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred ---ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 46899999999999999999999995 89999999863
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.7e-56 Score=451.78 Aligned_cols=258 Identities=23% Similarity=0.369 Sum_probs=214.2
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHH---HHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKRE---VKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E---~~il~~l~~hpniv 172 (574)
++|++++.||+|+||.||+|+++.+|+.||||++.+..... ......+.+| +.+++.+ +|||||
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~------------~~~~~~~~~e~~~~~~l~~~-~hpnIv 70 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM------------KQGETLALNERIMLSLVSTG-DCPFIV 70 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH------------HTCHHHHHHHHHHHHHHSSS-CCTTBC
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcch------------hhHHHHHHHHHHHHHHHhcC-CCCcEE
Confidence 46999999999999999999999999999999997653211 1112233444 5566666 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
+++++|.+++.+|||||||+||+|.+++.. ...+++..++.++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 71 ~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~---~~g~ 145 (364)
T d1omwa3 71 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGH 145 (364)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---SSSC
T ss_pred EEEEEEEECCEEEEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc---CCCc
Confidence 999999999999999999999999998854 36789999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCCCccccccCccccchHhhh-c-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCC
Q 008197 253 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 330 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~ 330 (574)
+||+|||+|+..... .....+||+.|+|||++. + .++.++|||||||++|+|+||+.||.+........ +......
T Consensus 146 iKl~DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~~ 223 (364)
T d1omwa3 146 VRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT 223 (364)
T ss_dssp EEECCCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSSS
T ss_pred EEEeeeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccc
Confidence 999999999876543 345668999999999985 3 36889999999999999999999998765443332 2222222
Q ss_pred CCCCCCCCCCHHHHHHHHHccccCCCCCCC-----HHHHhcCcccccc
Q 008197 331 FRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG 373 (574)
Q Consensus 331 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-----~~~~l~hp~~~~~ 373 (574)
.....++.+|+++.+||.+||.+||.+||| |+++++||||+..
T Consensus 224 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 224 MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp CCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 333344678999999999999999999999 7999999999864
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-55 Score=437.09 Aligned_cols=262 Identities=26% Similarity=0.437 Sum_probs=218.5
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+++|+++ +|||||+++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-------------~~~~~~~~~~Ei~il~~l-~Hp~Iv~~~ 67 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-------------TEGVPSTAIREISLLKEL-NHPNIVKLL 67 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------------------CCHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-------------ChHHHHHHHHHHHHHHhC-CCCcEEEec
Confidence 479999999999999999999999999999999965421 112346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+++.+|+|||||.+ .+.+.+.......+++..++.++.||+.||.|||++|||||||||+|||++ .++.+||
T Consensus 68 ~~~~~~~~~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~---~~~~~kl 143 (298)
T d1gz8a_ 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKL 143 (298)
T ss_dssp EEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEE
T ss_pred cccccccceeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec---ccCccee
Confidence 999999999999999965 566666556667899999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||+|+..... ......+||+.|+|||++... ++.++|||||||++|+|++|+.||.+.+....+..+........
T Consensus 144 ~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~ 223 (298)
T d1gz8a_ 144 ADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223 (298)
T ss_dssp CSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred ccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999999876543 344567899999999987543 47889999999999999999999998887776666654211111
Q ss_pred CC-------------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 333 RK-------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 333 ~~-------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
.. .++.+|+++.+||.+||+.||.+|||++|+|+||||++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~ 291 (298)
T d1gz8a_ 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291 (298)
T ss_dssp TTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred hhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCC
Confidence 11 12356889999999999999999999999999999987643
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-56 Score=440.35 Aligned_cols=259 Identities=25% Similarity=0.359 Sum_probs=212.2
Q ss_pred ecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 100 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
.+++||+|+||+||+|+++.+|+.||||++...... .......+.+.+|+.+|+.+ +|||||++++++.
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~----------~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~ 70 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS----------EAKDGINRTALREIKLLQEL-SHPNIIGLLDAFG 70 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC----------------------CTHHHHHHHHHHHC-CCTTBCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhh----------hhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeec
Confidence 457899999999999999999999999999764211 00111234688999999999 5999999999999
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeec
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG 259 (574)
+++++|||||||.|+++.... .....+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus 71 ~~~~~~ivmE~~~~~~~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~---~~~~~KL~DFG 145 (299)
T d1ua2a_ 71 HKSNISLVFDFMETDLEVIIK--DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFG 145 (299)
T ss_dssp CTTCCEEEEECCSEEHHHHHT--TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCG
T ss_pred cCCceeehhhhhcchHHhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec---CCCccccccCc
Confidence 999999999999887665433 4557799999999999999999999999999999999999998 47899999999
Q ss_pred cccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCCCC--
Q 008197 260 LSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-- 334 (574)
Q Consensus 260 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~-- 334 (574)
+|+..... ......+||+.|+|||++.. .++.++|||||||++|||++|.+||.+.+..+.+..+..........
T Consensus 146 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~ 225 (299)
T d1ua2a_ 146 LAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 225 (299)
T ss_dssp GGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred cccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 99876543 33456789999999998864 35889999999999999999999999988888777776421111000
Q ss_pred ----------------------CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 335 ----------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 335 ----------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.++.+++++.+||.+||+.||++||||.|+|+||||++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 226 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP 287 (299)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred cchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence 0235688999999999999999999999999999999754
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-56 Score=433.50 Aligned_cols=256 Identities=29% Similarity=0.525 Sum_probs=213.0
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc-CCCCcc
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA-GHENVV 172 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~-~hpniv 172 (574)
+.++|++++.||+|+||.||+|+++.+|+.||||++.+...... ........+.+|+.+|+++. .|||||
T Consensus 2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~---------~~~~~~~~~~~E~~il~~l~~~h~nIv 72 (273)
T d1xwsa_ 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW---------GELPNGTRVPMEVVLLKKVSSGFSGVI 72 (273)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCE---------EECTTCCEEEHHHHHHHHHCSSSCSBC
T ss_pred CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccch---------hhhhHHHHHHHHHHHHHHhccCCCCcc
Confidence 45689999999999999999999999999999999976522100 00011223568999999995 389999
Q ss_pred eEEEEEEcCCEEEEEEeccCC-CchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
++++++.+++.+|+||||+.+ +++.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++. +.+
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--~~~ 148 (273)
T d1xwsa_ 73 RLLDWFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRG 148 (273)
T ss_dssp CEEEEEECSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTT
T ss_pred EEEEEEeeCCeEEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--CCC
Confidence 999999999999999999976 567776643 367999999999999999999999999999999999999984 357
Q ss_pred CeEEEeeccccccCCCCCccccccCccccchHhhhcC-C-CCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCC
Q 008197 252 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 329 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~-~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~ 329 (574)
.+||+|||+|..... ....+.+||+.|+|||++.+. + +.++|||||||++|+|++|+.||.+. ..+..+..
T Consensus 149 ~vkl~DFG~a~~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~ 221 (273)
T d1xwsa_ 149 ELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQV 221 (273)
T ss_dssp EEEECCCTTCEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCC
T ss_pred eEEECccccceeccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhccc
Confidence 899999999986543 334567899999999998754 3 56789999999999999999999653 23555544
Q ss_pred CCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 330 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 330 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.++ +.+|+++.+||.+||+.||.+|||++|+|+||||++.
T Consensus 222 ~~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 261 (273)
T d1xwsa_ 222 FFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261 (273)
T ss_dssp CCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred CCC----CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 333 4689999999999999999999999999999999864
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-54 Score=433.21 Aligned_cols=265 Identities=26% Similarity=0.365 Sum_probs=217.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCC-CCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc--CCCCc
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKAN-GDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--GHENV 171 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--~hpni 171 (574)
.++|++++.||+|+||+||+|++..+ ++.||||++...... ......+.+|+.+|+.|. +||||
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~-------------~~~~~~~~~E~~~l~~l~~~~HpnI 72 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-------------EGMPLSTIREVAVLRHLETFEHPNV 72 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT-------------TSCBCTHHHHHHHHHHHHHTCCTTB
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc-------------chHHHHHHHHHHHHHHHhhcCCCCc
Confidence 46899999999999999999999765 667999998764210 111224567888887764 69999
Q ss_pred ceEEEEEEc-----CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEcc
Q 008197 172 VKFYNAFED-----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 246 (574)
Q Consensus 172 v~~~~~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~ 246 (574)
++++++|.. ...++++||||.++.+. .........+++..++.++.||+.||+|||++|||||||||+|||++
T Consensus 73 v~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~- 150 (305)
T d1blxa_ 73 VRLFDVCTVSRTDRETKLTLVFEHVDQDLTT-YLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT- 150 (305)
T ss_dssp CCEEEEEEEEECSSEEEEEEEEECCSCBHHH-HHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-
T ss_pred ceeeeeecccccccCceEEEEEEeccCCchh-hhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEc-
Confidence 999999853 45799999999887654 34445567799999999999999999999999999999999999998
Q ss_pred CCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 247 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 247 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
..+.+||+|||++............+||+.|+|||++.+ .++.++||||+||++|||++|++||.+.+..+.+..++
T Consensus 151 --~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 228 (305)
T d1blxa_ 151 --SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 228 (305)
T ss_dssp --TTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred --CCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 478999999999987665566677899999999998865 56899999999999999999999999988887777765
Q ss_pred hCCCCC-----------------------CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCCC
Q 008197 326 RNKPDF-----------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 376 (574)
Q Consensus 326 ~~~~~~-----------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~~ 376 (574)
...... ....++.+++.+.+||.+||+.||++|||+.|+|+||||++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~ 302 (305)
T d1blxa_ 229 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC 302 (305)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred HhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhh
Confidence 421100 001234678999999999999999999999999999999986543
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=9.5e-55 Score=427.83 Aligned_cols=261 Identities=28% Similarity=0.437 Sum_probs=217.6
Q ss_pred ccccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 93 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
.+.++|++.+.||+|+||.||+|+++.+|+.||||++.+... ......+.+.+|+.+|+.+ +|||||
T Consensus 4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------------~~~~~~~~~~~E~~~l~~~-~hpniv 70 (277)
T d1o6ya_ 4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLA------------RDPSFYLRFRREAQNAAAL-NHPAIV 70 (277)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTT------------TCHHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhc------------cCHHHHHHHHHHHHHHHhc-CCCCCC
Confidence 356789999999999999999999999999999999976521 1233456789999999999 599999
Q ss_pred eEEEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 173 KFYNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 173 ~~~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
++++++...+ .+|||||||+||+|.+.+.. .+++++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 71 ~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~--- 145 (277)
T d1o6ya_ 71 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--- 145 (277)
T ss_dssp CEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---
T ss_pred cccceeeeccCCCceEEEEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---
Confidence 9999997643 48999999999999987744 36799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCC----CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 323 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~ 323 (574)
.++.++|+|||++...... ......+||+.|+|||++.+. ++.++|||||||++|+|+||++||.+.+..+....
T Consensus 146 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~ 225 (277)
T d1o6ya_ 146 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 225 (277)
T ss_dssp TTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 4788999999998754322 233456899999999998764 68899999999999999999999999998888888
Q ss_pred HHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccc
Q 008197 324 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 371 (574)
Q Consensus 324 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~ 371 (574)
++...+.++...++.+|+++.+||.+||++||.+||+..+.|.|+|.+
T Consensus 226 ~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 226 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp HHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence 888877666666788999999999999999999999544555677764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.2e-54 Score=423.03 Aligned_cols=248 Identities=21% Similarity=0.298 Sum_probs=212.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++.+.||+|+||+||+|+++.+|+.||||++.... ...+.+.+|+.+|++| +|||||+++
T Consensus 17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----------------~~~~~~~~E~~il~~l-~HpnIv~~~ 79 (287)
T d1opja_ 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----------------MEVEEFLKEAAVMKEI-KHPNLVQLL 79 (287)
T ss_dssp GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----------------SCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----------------chHHHHHHHHHHHHhC-CCCCEecCC
Confidence 57999999999999999999999999999999987541 2346789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+++.+|||||||++|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||
T Consensus 80 ~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~---~~~~Kl 156 (287)
T d1opja_ 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE---NHLVKV 156 (287)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCEEE
T ss_pred ccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECC---CCcEEE
Confidence 99999999999999999999999987766778999999999999999999999999999999999999984 789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+....... .....||+.|+|||++. +.++.++|||||||++|||++|..||... +...+...+ .....
T Consensus 157 ~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i-~~~~~- 234 (287)
T d1opja_ 157 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKDYR- 234 (287)
T ss_dssp CCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HTTCC-
T ss_pred ccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH-hcCCC-
Confidence 99999987654332 23456899999999876 56788999999999999999977666554 444444444 33322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
....+.+|+++.+||.+||+.||.+|||+.++++
T Consensus 235 -~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 235 -MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 2233568999999999999999999999999965
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=8.4e-54 Score=423.34 Aligned_cols=257 Identities=28% Similarity=0.423 Sum_probs=211.8
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++ +|+.||||++..... .....+.+.+|+.+|+++ +|||||+++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-------------~~~~~~~~~~E~~il~~l-~hpnIv~~~ 66 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-------------DEGIPSTTIREISILKEL-KHSNIVKLY 66 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-------------GGCCCHHHHHHHHGGGGC-CCTTBCCEE
T ss_pred CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-------------ChHHHHHHHHHHHHHHhC-CCCcEEeee
Confidence 58999999999999999999985 789999999976421 122346788999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|..++..|++|||+.++.+.... ...+.+++..++.++.||+.||+|||++|||||||||+|||++ .++.+||
T Consensus 67 ~~~~~~~~~~i~~e~~~~~~~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~---~~~~~kl 141 (286)
T d1ob3a_ 67 DVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKI 141 (286)
T ss_dssp EEEECSSCEEEEEECCSEEHHHHHH--TSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEE
T ss_pred eecccCCceeEEEEeehhhhHHHHH--hhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc---CCCCEEe
Confidence 9999999999999999776554433 4457899999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC-CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 256 TDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 256 ~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
+|||+|...... ......+||+.|+|||.+.+ .++.++|||||||++|||++|+.||.+.+..+.+.++........
T Consensus 142 ~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~ 221 (286)
T d1ob3a_ 142 ADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPN 221 (286)
T ss_dssp CCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCC
Confidence 999999876533 23445689999999998864 358999999999999999999999998887777666553211111
Q ss_pred C-------------------------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 333 R-------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 333 ~-------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
. ...+.+++++.+||.+||++||++|||+.|+|+||||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred hhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence 0 112457889999999999999999999999999999985
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-53 Score=427.44 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=213.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC-----EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD-----RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++++.||+|+||+||+|++..+++ .||||.+.... .......+.+|+.+|.++.+|||
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~Hpn 102 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--------------DSSEREALMSELKMMTQLGSHEN 102 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------------------CHHHHHHHHHHHHHCCCTT
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--------------CHHHHHHHHHHHHHHHHhcCCCc
Confidence 579999999999999999999876554 69999886541 12234578899999999967999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHH
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECHL 229 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~l~~LH~ 229 (574)
||++++++.+.+.+|||||||+||+|.+++..... ..+++..++.++.||+.||.|||+
T Consensus 103 Iv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~ 182 (325)
T d1rjba_ 103 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 182 (325)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999865431 358999999999999999999999
Q ss_pred CCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHH
Q 008197 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYIL 305 (574)
Q Consensus 230 ~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~el 305 (574)
++||||||||+|||++ .++.+||+|||+|+....... ..+.+||+.|||||++. +.++.++|||||||++|||
T Consensus 183 ~~IiHRDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~em 259 (325)
T d1rjba_ 183 KSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 259 (325)
T ss_dssp TTEEETTCSGGGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CCeeeccCchhccccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHH
Confidence 9999999999999998 478999999999987654332 23567899999999875 5678899999999999999
Q ss_pred Hh-CCCCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 306 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 306 lt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
+| |++||.+.+....+..++.....++. .+.+|+++.+||.+||+.||++|||+++|++|
T Consensus 260 lt~g~~Pf~~~~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 260 FSLGVNPYPGIPVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp TTTSCCSSTTCCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HhCCCCCCCCCCHHHHHHHHHhcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 98 89999988777777777776544332 35689999999999999999999999999875
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.5e-53 Score=428.38 Aligned_cols=253 Identities=26% Similarity=0.508 Sum_probs=212.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|+++++||+|+||+||+|+++.+|+.||||++.+. ..+.+.+|+.+|+.+.+||||++++
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------------------~~~~~~~Ei~il~~l~~hpnIv~~~ 96 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------------------KKKKIKREIKILENLRGGPNIITLA 96 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------------------CHHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------------------HHHHHHHHHHHHHhccCCCCCcEEE
Confidence 5799999999999999999999999999999998754 2356789999999997799999999
Q ss_pred EEEEc--CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 176 NAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 176 ~~~~~--~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
++|.. ...+++|||||.+++|.... ..+++..++.++.||+.||.|||++|||||||||+|||++. ++..+
T Consensus 97 ~~~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~v 169 (328)
T d3bqca1 97 DIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKL 169 (328)
T ss_dssp EEEECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEE
T ss_pred EEEEecCCCceeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCee
Confidence 99984 46799999999999986542 57999999999999999999999999999999999999985 34579
Q ss_pred EEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChh-HHHHHHHh----
Q 008197 254 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR---- 326 (574)
Q Consensus 254 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~---- 326 (574)
||+|||+|............+||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+..
T Consensus 170 kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~ 249 (328)
T d3bqca1 170 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249 (328)
T ss_dssp EECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCH
T ss_pred eecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCC
Confidence 9999999998877777778899999999998765 3588999999999999999999999765432 21111110
Q ss_pred ---------CCCC--------------------CCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 327 ---------NKPD--------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 327 ---------~~~~--------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.... +....+..+++++.+||.+||+.||.+|||++|+|+||||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 250 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp HHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred chhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 0000 0111123478899999999999999999999999999999874
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-53 Score=417.00 Aligned_cols=252 Identities=21% Similarity=0.327 Sum_probs=213.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++ +++.||||++.... ...+.+.+|+.+|+++ +|||||+++
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----------------~~~~~~~~E~~~l~~l-~HpnIv~~~ 74 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----------------MSPDAFLAEANLMKQL-QHQRLVRLY 74 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----------------SCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----------------CCHHHHHHHHHHHHhC-CCCCEeEEE
Confidence 58999999999999999999975 57789999987541 2345789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+ +.+|||||||++|+|.+++......++++..+..++.||+.||.|||+++|+||||||+||||+ .++.+||
T Consensus 75 g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~---~~~~~Kl 150 (272)
T d1qpca_ 75 AVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKI 150 (272)
T ss_dssp EEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEE
T ss_pred eeecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee---cccceee
Confidence 98765 5579999999999999987655556799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhC-CCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg-~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+....... .....||+.|+|||++.. .++.++|||||||++|||+|| .+||...+..++...+..+....
T Consensus 151 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~ 230 (272)
T d1qpca_ 151 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230 (272)
T ss_dssp CCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred ccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC
Confidence 99999987754432 345689999999998874 568899999999999999995 55566666667777776653222
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc--Cccccc
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVRE 372 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~--hp~~~~ 372 (574)
..+.+|+++.+||.+||+.||.+|||++++++ |+||..
T Consensus 231 ---~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 231 ---RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence 22568899999999999999999999999998 788863
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=417.73 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=203.7
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+.. ..||||+++... ......+.+.+|+.+|+++ +|||||+++
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~-------------~~~~~~~~~~~E~~~l~~l-~HpnIv~~~ 70 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-------------PTPQQLQAFKNEVGVLRKT-RHVNILLFM 70 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSS-------------CCTTHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEccc-------------CCHHHHHHHHHHHHHHHhC-CCCCEeeee
Confidence 57999999999999999999743 369999987542 1223567889999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.. +.++||||||+||+|.+++... ..++++..+..++.||+.||.|||+++||||||||+|||++ .++.+||
T Consensus 71 ~~~~~-~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~~Kl 145 (276)
T d1uwha_ 71 GYSTA-PQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKI 145 (276)
T ss_dssp EEECS-SSCEEEEECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSSEEE
T ss_pred EEEec-cEEEEEEecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCCEEE
Confidence 98754 5689999999999999988543 45799999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCC---CCccccccCccccchHhhhc----CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhCC
Q 008197 256 TDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 256 ~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~----~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+|||+|+..... ......+||+.|||||++.+ .++.++|||||||++|||+||+.||.+.+.......++...
T Consensus 146 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~ 225 (276)
T d1uwha_ 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225 (276)
T ss_dssp CCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT
T ss_pred ccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcC
Confidence 999999876432 23346789999999999863 35778999999999999999999998877665554444433
Q ss_pred -CCCC-CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 329 -PDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 329 -~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.... ....+.+|+++.+||.+||..||.+|||+.+++++
T Consensus 226 ~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp SCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 2211 12345688999999999999999999999999875
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-52 Score=427.12 Aligned_cols=255 Identities=28% Similarity=0.421 Sum_probs=212.4
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
+|+.+++||+|+||+||+|+++.+|+.||||++.+... ...+|+.+|++| +||||+++++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------------------~~~~Ei~il~~l-~h~niv~~~~ 80 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------------------FKNRELQIMRKL-DHCNIVRLRY 80 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------------------SCCHHHHHHHHC-CCTTBCCEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------------------HHHHHHHHHHhc-CCCCCCcEEE
Confidence 69999999999999999999999999999999976421 123799999999 5999999999
Q ss_pred EEEc------CCEEEEEEeccCCCchHHHHH--hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 177 AFED------DNYVYIAMELCEGGELLDRIL--AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 177 ~~~~------~~~~~lv~e~~~gg~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+|.. ..++|||||||+++ +.+.+. ......+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 81 ~~~~~~~~~~~~~~~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~-- 157 (350)
T d1q5ka_ 81 FFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-- 157 (350)
T ss_dssp EEEEC--CCSCCEEEEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--
T ss_pred EEEecCccCCceEEEEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--
Confidence 9853 34689999999765 444332 234567999999999999999999999999999999999999984
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
+...+||+|||+|..........+.+||+.|+|||.+.+ .++.++||||+||++|||++|++||...+....+..+..
T Consensus 158 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~ 237 (350)
T d1q5ka_ 158 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237 (350)
T ss_dssp TTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHH
T ss_pred CCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHH
Confidence 345899999999988776666677899999999998754 468999999999999999999999988887776666543
Q ss_pred CC-----------------CCCCC--------CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 327 NK-----------------PDFRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 327 ~~-----------------~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
.. ..++. ...+.+++++.+||.+||..||.+|||+.|+|+||||++..
T Consensus 238 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp HHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 10 00110 11245789999999999999999999999999999998753
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-52 Score=420.85 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=210.6
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.+ +||||++++
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~-------------~~~~~~~~~~E~~il~~l-~h~nii~~~ 75 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-------------KEGFPITALREIKILQLL-KHENVVNLI 75 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C-------------TTSSCHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-------------chHHHHHHHHHHHHHHHh-cCCCccceE
Confidence 689999999999999999999999999999999866421 122345678999999999 599999999
Q ss_pred EEEEc--------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 176 NAFED--------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 176 ~~~~~--------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
+++.. ++.+|+|||||.++.+... ......+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~--~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~-- 151 (318)
T d3blha1 76 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLL--SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 151 (318)
T ss_dssp EEEEC----------CEEEEEECCCEEHHHHH--TCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC--
T ss_pred eeeecccccccccCceEEEEEeccCCCccchh--hhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec--
Confidence 98854 4568999999987655432 34457899999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCC-----CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHH
Q 008197 248 KEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI 320 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~ 320 (574)
.++.+||+|||+|...... ......+||+.|+|||++.+ .++.++||||+||++|||++|++||.+.+....
T Consensus 152 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~ 230 (318)
T d3blha1 152 -RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 230 (318)
T ss_dssp -TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred -CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHH
Confidence 4789999999999765432 22345689999999998864 468999999999999999999999998887777
Q ss_pred HHHHHhCCCCCCCCCCCC----------------------------CCHHHHHHHHHccccCCCCCCCHHHHhcCccccc
Q 008197 321 FKEVLRNKPDFRRKPWPS----------------------------ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 372 (574)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~ 372 (574)
...+......+....+.. .++++.+||.+||+.||++|||+.|+|+||||++
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~ 310 (318)
T d3blha1 231 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310 (318)
T ss_dssp HHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred HHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence 666654332222221111 2667889999999999999999999999999996
Q ss_pred c
Q 008197 373 G 373 (574)
Q Consensus 373 ~ 373 (574)
.
T Consensus 311 ~ 311 (318)
T d3blha1 311 D 311 (318)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9e-53 Score=417.19 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=202.4
Q ss_pred cceeecccccccCCeEEEEEEEcCCCC---EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~---~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++.+.||+|+||+||+|+++.+|+ .||||.+.... .....+.+.+|+.+|++| +|||||
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~HpnIv 90 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--------------TEKQRRDFLSEASIMGQF-DHPNVI 90 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--------------CHHHHHHHHHHHHHHTTC-CCTTBC
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--------------CHHHHHHHHHHHHHHHhC-CCCCCc
Confidence 479999999999999999999887764 58899876531 123456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+++.+|+|||||+||+|.+++.. ..+.+++..+..++.||+.||.|||+++||||||||+|||++ .++.
T Consensus 91 ~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~---~~~~ 166 (299)
T d1jpaa_ 91 HLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN---SNLV 166 (299)
T ss_dssp CEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCC
T ss_pred cEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC---CCCc
Confidence 999999999999999999999999987643 345799999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCCCC------ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHH
Q 008197 253 LKATDFGLSDFIKPGKK------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i 324 (574)
+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |++||.+.+..++...+
T Consensus 167 ~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i 246 (299)
T d1jpaa_ 167 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 246 (299)
T ss_dssp EEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred EEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 99999999987654322 123468999999999864 56889999999999999998 89999999888888887
Q ss_pred HhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 325 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
..+.. .+....+|+++.+||.+||+.||.+|||+.+++++
T Consensus 247 ~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 247 EQDYR---LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HTTCC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HcCCC---CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 76532 22335689999999999999999999999998763
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=413.19 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=212.8
Q ss_pred cceeeccc-ccccCCeEEEEEEEcC--CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKL-LGHGQFGYTYVATDKA--NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~-lG~G~~g~Vy~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|.+.+. ||+|+||.||+|.++. ++..||||+++... .....+.+.+|+++|+++ +|||||
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--------------~~~~~~~~~~E~~il~~l-~HpnIv 72 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--------------EKADTEEMMREAQIMHQL-DNPYIV 72 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--------------CHHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--------------CHHHHHHHHHHHHHHHhC-CCCCEe
Confidence 46788874 9999999999998764 44579999987541 123456799999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.++ .+|||||||+||+|.+++.. ....+++..+..++.||+.||.|||++|||||||||+|||++. ++.
T Consensus 73 ~l~g~~~~~-~~~lvmE~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~---~~~ 147 (285)
T d1u59a_ 73 RLIGVCQAE-ALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN---RHY 147 (285)
T ss_dssp CEEEEEESS-SEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE---TTE
T ss_pred eEeeeeccC-eEEEEEEeCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeecc---CCc
Confidence 999999765 58999999999999987643 3467999999999999999999999999999999999999984 789
Q ss_pred eEEEeeccccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+||+|||+|+....... ....+||+.|+|||++.. .++.++|||||||++|||+| |+.||.+.+..++...+..
T Consensus 148 ~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~ 227 (285)
T d1u59a_ 148 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 227 (285)
T ss_dssp EEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT
T ss_pred eeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 99999999987654332 234578999999998864 56889999999999999998 9999998888888887776
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHH---hcCccccc
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWVRE 372 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~---l~hp~~~~ 372 (574)
+... ...+.+|+++.+||.+||..||++|||+.++ |+|+|+.-
T Consensus 228 ~~~~---~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 228 GKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp TCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC---CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 5432 2235789999999999999999999999887 56788753
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-53 Score=410.23 Aligned_cols=247 Identities=21% Similarity=0.367 Sum_probs=202.3
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|+++ +++.||||++.... ...+.+.+|+.+++++ +|||||+++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~----------------~~~~~~~~E~~~l~~l-~HpnIv~~~ 66 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGA----------------MSEEDFIEEAEVMMKL-SHPKLVQLY 66 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSS----------------SCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCc----------------CcHHHHHHHHHHHHhc-CCCCccccc
Confidence 46999999999999999999975 56789999987642 2346789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++..++.+|||||||++|+|.+++... ...+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||
T Consensus 67 g~~~~~~~~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~---~~~~~Kl 142 (263)
T d1sm2a_ 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKV 142 (263)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC---GGGCEEE
T ss_pred ceeccCCceEEEEEecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec---CCCCeEe
Confidence 9999999999999999999999987543 46789999999999999999999999999999999999999 4789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||...+..+++..+..+....
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~ 222 (263)
T d1sm2a_ 143 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY 222 (263)
T ss_dssp CSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCC
T ss_pred cccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCC
Confidence 99999987654332 234689999999999875 56889999999999999999 577777777777888777764332
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
. ....++++.+||.+||+.||.+|||++++++|
T Consensus 223 ~---p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 223 K---PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp C---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred C---ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 2 24578999999999999999999999999875
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-52 Score=425.46 Aligned_cols=258 Identities=29% Similarity=0.487 Sum_probs=209.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+.. ......+.+.+|+.+|+.+ +|||||+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-------------~~~~~~~~~~~Ei~il~~l-~hpniv~ 81 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-------------QSELFAKRAYRELRLLKHM-RHENVIG 81 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-------------SSHHHHHHHHHHHHHHHHC-CBTTBCC
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-------------cChHHHHHHHHHHHHHHhc-CCCCeeE
Confidence 5679999999999999999999999999999999997541 1223456789999999999 5999999
Q ss_pred EEEEEEcCC------EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccC
Q 008197 174 FYNAFEDDN------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 247 (574)
Q Consensus 174 ~~~~~~~~~------~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~ 247 (574)
++++|...+ ++|+||||| +.+|...+. ..++++..++.++.||+.||.|||++|||||||||+|||++
T Consensus 82 l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~-- 155 (346)
T d1cm8a_ 82 LLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-- 155 (346)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC--
T ss_pred EEEEeccCccccccceEEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcc--
Confidence 999998654 579999999 666666542 35799999999999999999999999999999999999998
Q ss_pred CCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHH
Q 008197 248 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 325 (574)
Q Consensus 248 ~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 325 (574)
.++.+||+|||+|+.... .....+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+....+..+.
T Consensus 156 -~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~ 232 (346)
T d1cm8a_ 156 -EDCELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 232 (346)
T ss_dssp -TTCCEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred -cccccccccccceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHH
Confidence 588999999999987643 3356789999999998864 34789999999999999999999998887665554443
Q ss_pred hCC-----------------------CCCCCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccC
Q 008197 326 RNK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 374 (574)
Q Consensus 326 ~~~-----------------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~ 374 (574)
... +..... ..+.+++++.+||.+||+.||.+|||+.++|+||||++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 233 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred hccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence 211 111111 2356789999999999999999999999999999998753
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-52 Score=405.53 Aligned_cols=247 Identities=22% Similarity=0.342 Sum_probs=214.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++ +++.||||++++.. ...+.+.+|+.+++++ +||||++++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~----------------~~~~~~~~Ev~~~~~l-~HpnIv~~~ 65 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS----------------MSEDEFIEEAKVMMNL-SHEKLVQLY 65 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSS----------------SCHHHHHHHHHHHHTC-CCTTBCCEE
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCc----------------CCHHHHHHHHHHHHhc-CCCceeeEE
Confidence 46899999999999999999974 77899999997652 2345789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+++.+++||||+++|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 66 g~~~~~~~~~iv~Ey~~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~---~~~~~kl 141 (258)
T d1k2pa_ 66 GVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKV 141 (258)
T ss_dssp EEECCSSSEEEEEECCTTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC---TTCCEEE
T ss_pred EEEeeCCceEEEEEccCCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc---CCCcEEE
Confidence 9999999999999999999998886544 35789999999999999999999999999999999999998 4789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+....... .....||+.|+|||++. ..++.++|||||||++|||+| |+.||.+.+..++...+..+....
T Consensus 142 ~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~ 221 (258)
T d1k2pa_ 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY 221 (258)
T ss_dssp CCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred CcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 99999987654332 23467999999999886 456889999999999999998 899999999888888887754322
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.....++++.+||.+||+.||++|||+.++++|
T Consensus 222 ---~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 222 ---RPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp ---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred ---CcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 224678999999999999999999999999986
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=411.98 Aligned_cols=246 Identities=22% Similarity=0.296 Sum_probs=203.8
Q ss_pred ccccccCCeEEEEEEEc--CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEEEEE
Q 008197 102 KLLGHGQFGYTYVATDK--ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYNAFE 179 (574)
Q Consensus 102 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~~~~ 179 (574)
++||+|+||.||+|.++ .+++.||||++.... ..+...+.+.+|+.+|++| +|||||++++++.
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-------------~~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~ 78 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-------------NDPALKDELLAEANVMQQL-DNPYIVRMIGICE 78 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------------------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEE
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-------------CCHHHHHHHHHHHHHHHhC-CCCCCceEEEEec
Confidence 46999999999999864 356789999986531 1123456799999999999 5999999999997
Q ss_pred cCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEEEeec
Q 008197 180 DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 259 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG 259 (574)
++ .+|||||||++|+|.+++. ...++++..+..++.||+.||.|||+++||||||||+|||++. ++.+||+|||
T Consensus 79 ~~-~~~lvmE~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~---~~~~kl~DFG 152 (277)
T d1xbba_ 79 AE-SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFG 152 (277)
T ss_dssp SS-SEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCT
T ss_pred cC-CEEEEEEcCCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccc---cCcccccchh
Confidence 65 4789999999999999874 4467999999999999999999999999999999999999984 7899999999
Q ss_pred cccccCCCCC----ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCCC
Q 008197 260 LSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR 333 (574)
Q Consensus 260 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~ 333 (574)
+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |++||.+.+..++...+..+...
T Consensus 153 la~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~--- 229 (277)
T d1xbba_ 153 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM--- 229 (277)
T ss_dssp TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---
T ss_pred hhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC---
Confidence 9987654332 224579999999998864 46889999999999999998 89999998888888777765422
Q ss_pred CCCCCCCHHHHHHHHHccccCCCCCCCHHHH---hcCccc
Q 008197 334 KPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWV 370 (574)
Q Consensus 334 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~---l~hp~~ 370 (574)
+..+.+|+++.+||.+||+.||.+|||+.++ |+|+|+
T Consensus 230 ~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 269 (277)
T d1xbba_ 230 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269 (277)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence 2225689999999999999999999999998 456664
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-52 Score=423.42 Aligned_cols=260 Identities=28% Similarity=0.462 Sum_probs=209.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+..+|++++.||+|+||+||+|+++.+|+.||||++.+.. .....+.+.+|+.+|+.| +||||++
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--------------~~~~~~~~~~Ei~il~~l-~hp~iv~ 70 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--------------HQTYCQRTLREIKILLRF-RHENIIG 70 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--------------CHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--------------ChHHHHHHHHHHHHHHHc-CCCCCCc
Confidence 4468999999999999999999999999999999997541 123456788999999999 5999999
Q ss_pred EEEEEEcCC-----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~~~-----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++.... .+|++ +|+.||+|.+++.. .++++..++.++.||+.||+|||++|||||||||+|||++
T Consensus 71 ~~~~~~~~~~~~~~~~~l~-~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~--- 143 (345)
T d1pmea_ 71 INDIIRAPTIEQMKDVYLV-THLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN--- 143 (345)
T ss_dssp CCEEECCSSTTTCCCEEEE-EECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---
T ss_pred EEEEEeeccccccceEEEE-EeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC---
Confidence 999997543 34554 55669999998843 4699999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCC----CCccccccCccccchHhhhc--CCCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHH
Q 008197 249 EDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK 322 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~ 322 (574)
.++.+||+|||+|...... ......+||+.|+|||++.. .++.++||||+||++|+|++|+.||.+........
T Consensus 144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~ 223 (345)
T d1pmea_ 144 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN 223 (345)
T ss_dssp TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred CCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHH
Confidence 4789999999999765432 22355689999999998743 35788999999999999999999998877655444
Q ss_pred HHHhC-----------------------CCCCCC----CCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 323 EVLRN-----------------------KPDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 323 ~i~~~-----------------------~~~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..... ...... ..++.+++++.+||.+||+.||.+|||+.++|+||||+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~ 303 (345)
T d1pmea_ 224 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303 (345)
T ss_dssp HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred HHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence 43221 000011 124578899999999999999999999999999999996544
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=420.79 Aligned_cols=262 Identities=27% Similarity=0.470 Sum_probs=216.3
Q ss_pred cceeecccccccCCeEEEEEEE---cCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATD---KANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++++.||+|+||+||+|++ +.+|+.||||++.+.... ......+.+.+|+.+|+++.+||||+
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~-----------~~~~~~~~~~~E~~il~~l~h~pnIv 92 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV-----------QKAKTTEHTRTERQVLEHIRQSPFLV 92 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEE-----------EEESSGGGCCCHHHHHHHHHTCTTBC
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhc-----------cchHHHHHHHHHHHHHHhccCCCeEE
Confidence 5699999999999999999987 447899999999764210 00112345779999999997569999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+...+++||||+.||+|.+++... +.+++..+..++.||+.||.|||++|||||||||+|||++ .++.
T Consensus 93 ~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~ 167 (322)
T d1vzoa_ 93 TLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGH 167 (322)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSC
T ss_pred EeeeeeccCCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCC
Confidence 9999999999999999999999999988543 5788999999999999999999999999999999999998 4789
Q ss_pred eEEEeeccccccCCC--CCccccccCccccchHhhhcC---CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 253 LKATDFGLSDFIKPG--KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
+||+|||+|+.+... .......||+.|+|||.+.+. ++.++|||||||+||+|++|+.||.+.........+...
T Consensus 168 vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~ 247 (322)
T d1vzoa_ 168 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR 247 (322)
T ss_dssp EEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH
T ss_pred EEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999999999865432 233567899999999998643 477899999999999999999999877655544444433
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCC-----CHHHHhcCcccccc
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG 373 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~~~l~hp~~~~~ 373 (574)
.........+.+|+++.+||.+||.+||.+|| |++|+++||||+..
T Consensus 248 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 248 ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred cccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 22222222356899999999999999999999 58999999999863
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-51 Score=407.99 Aligned_cols=259 Identities=24% Similarity=0.403 Sum_probs=216.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+|+.||||+++... ........+.+|+.+|+.+ +||||++++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------~~~~~~~~~~~E~~il~~l-~h~niv~~~ 67 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-------------DDEGVPSSALREICLLKEL-KHKNIVRLH 67 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-------------SSTTHHHHHHHHHHHHTTC-CCTTBCCEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh-------------CChHHHHHHHHHHHHHHhc-CcCCEEeec
Confidence 47999999999999999999999999999999996542 1123567889999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
++|.+...+++|++++.|++|...+ ...+.+++..++.++.|++.||+|||++|||||||||+|||++. ++.+||
T Consensus 68 ~~~~~~~~~~iv~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~---~~~~kl 142 (292)
T d1unla_ 68 DVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKL 142 (292)
T ss_dssp EEEECSSEEEEEEECCSEEHHHHHH--HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---TCCEEE
T ss_pred cccccccceeEEeeecccccccccc--ccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccccc---CCceee
Confidence 9999999999999999988887655 45578999999999999999999999999999999999999984 678999
Q ss_pred EeeccccccCCCC-CccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~~~~~ 331 (574)
+|||.|....... ......+++.|+|||++... ++.++|||||||++|||++|+.||... +..+.+..+.......
T Consensus 143 ~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (292)
T d1unla_ 143 ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222 (292)
T ss_dssp CCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCC
T ss_pred eecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCC
Confidence 9999998765433 33455788999999988653 478999999999999999999997544 4444555443211110
Q ss_pred -------------------------CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCcccccc
Q 008197 332 -------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 373 (574)
Q Consensus 332 -------------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~ 373 (574)
.....+.+++.+.+||.+||+.||.+||||+|+|+||||++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~ 289 (292)
T d1unla_ 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp CTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred ChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence 011224578899999999999999999999999999999864
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-52 Score=407.63 Aligned_cols=255 Identities=23% Similarity=0.330 Sum_probs=209.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||+||+|+++.+ ..||||++.... ...+.+.+|+.+|+++ +|||||+++
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~----------------~~~~~~~~E~~~l~~l-~h~nIv~~~ 78 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT----------------MSPEAFLQEAQVMKKL-RHEKLVQLY 78 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS----------------SCHHHHHHHHHHHHHC-CCTTBCCEE
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECccc----------------CCHHHHHHHHHHHHhc-ccCCEeEEE
Confidence 5799999999999999999998654 579999987541 2346789999999999 599999999
Q ss_pred EEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeEE
Q 008197 176 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 255 (574)
Q Consensus 176 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vkl 255 (574)
+++.+ +.+++|||||++|+|...+.......+++..+..++.||+.||.|||++||+||||||+||||+. ++.+||
T Consensus 79 g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~---~~~~kl 154 (285)
T d1fmka3 79 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE---NLVCKV 154 (285)
T ss_dssp EEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG---GGCEEE
T ss_pred EEEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECC---CCcEEE
Confidence 99865 45789999999999998887666677999999999999999999999999999999999999984 789999
Q ss_pred EeeccccccCCCCC--ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCC-CCCCCCChhHHHHHHHhCCCCC
Q 008197 256 TDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDF 331 (574)
Q Consensus 256 ~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~-~Pf~~~~~~~~~~~i~~~~~~~ 331 (574)
+|||+|+....... .....||+.|+|||++. +.++.++|||||||++|||++|. +||.+....+++..+..+..
T Consensus 155 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~-- 232 (285)
T d1fmka3 155 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-- 232 (285)
T ss_dssp CCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC--
T ss_pred cccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC--
Confidence 99999987654332 23467999999999886 45688999999999999999955 44555566667766665432
Q ss_pred CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc--CccccccCC
Q 008197 332 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREGGD 375 (574)
Q Consensus 332 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~--hp~~~~~~~ 375 (574)
.+..+.+|+++.+||.+||+.||++|||+++++. ++||+...+
T Consensus 233 -~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p 277 (285)
T d1fmka3 233 -MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 277 (285)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred -CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCC
Confidence 2234678999999999999999999999999988 899987543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-51 Score=403.23 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=201.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCC---CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++++.||+|+||.||+|++..++ ..||||.+.... .....+.+.+|+.+|+++ +|||||
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--------------~~~~~~~~~~E~~~l~~l-~HpnIv 71 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--------------SDSVREKFLQEALTMRQF-DHPHIV 71 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--------------SHHHHHHHHHHHHHHHTC-CCTTBC
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--------------CHHHHHHHHHHHHHHHhC-CCCCEe
Confidence 58999999999999999999986543 568999876431 123456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++. ++.+|+|||||++|+|.+++.. ....+++..+..++.||+.||.|||+++||||||||+|||++. ++.
T Consensus 72 ~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~---~~~ 146 (273)
T d1mp8a_ 72 KLIGVIT-ENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDC 146 (273)
T ss_dssp CEEEEEC-SSSCEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTE
T ss_pred eEEEEEe-cCeEEEEEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecC---CCc
Confidence 9999996 4678999999999999987643 3467999999999999999999999999999999999999994 789
Q ss_pred eEEEeeccccccCCCC--CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCC
Q 008197 253 LKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK 328 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~ 328 (574)
+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|||++ |.+||.+.+..+++..+..+.
T Consensus 147 ~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~ 226 (273)
T d1mp8a_ 147 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 226 (273)
T ss_dssp EEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred EEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999998765332 2345678999999999864 56889999999999999998 899999999988888887764
Q ss_pred CCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 329 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 329 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.. +.++.+|+++.+||.+||..||.+|||+.++++|
T Consensus 227 ~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 227 RL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 32 3346789999999999999999999999999764
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-51 Score=418.55 Aligned_cols=260 Identities=30% Similarity=0.427 Sum_probs=212.6
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.| +|||||+
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------------~~~~~~~~~~Ei~il~~l-~h~~iv~ 81 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-------------SIIHAKRTYRELRLLKHM-KHENVIG 81 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-------------SHHHHHHHHHHHHHHHHC-CCTTBCC
T ss_pred CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-------------ChHHHHHHHHHHHHHHhc-CCCCeee
Confidence 45689999999999999999999999999999999976421 123456788999999999 5999999
Q ss_pred EEEEEEcC-----CEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 174 FYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 174 ~~~~~~~~-----~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++++... ...++|++|+.||+|.+++. ..++++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~--- 155 (348)
T d2gfsa1 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--- 155 (348)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---
T ss_pred EEEEEeeccccccCceEEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc---
Confidence 99999643 33466677788999998772 35799999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC--CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHh
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~ 326 (574)
.++.+|++|||+|.... ......+||+.|+|||++.+. ++.++|||||||++|+|++|++||.+.+.......+..
T Consensus 156 ~~~~~kl~dfg~a~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~ 233 (348)
T d2gfsa1 156 EDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233 (348)
T ss_dssp TTCCEEECCC----CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred ccccccccccchhcccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 47899999999997653 334567899999999986653 47899999999999999999999998887766666654
Q ss_pred CCCCC-----------------------CCC----CCCCCCHHHHHHHHHccccCCCCCCCHHHHhcCccccccCC
Q 008197 327 NKPDF-----------------------RRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 375 (574)
Q Consensus 327 ~~~~~-----------------------~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~~~~~~~ 375 (574)
..... +.. .+..+++++.+||.+||+.||.+|||+.|+|+||||++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~ 309 (348)
T d2gfsa1 234 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309 (348)
T ss_dssp HHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred hcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence 32111 111 12467899999999999999999999999999999997543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-51 Score=417.59 Aligned_cols=257 Identities=28% Similarity=0.447 Sum_probs=200.6
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|+++++||+|+||+||+|+++.+|+.||||++.+.. ........+.+|+.+|+++ +|||||++
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~-------------~~~~~~~~~~~Ei~il~~l-~hpnIv~~ 81 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-------------QNQTHAKRAYRELVLMKCV-NHKNIISL 81 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT-------------SSHHHHHHHHHHHHHHHHC-CCTTBCCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh-------------cCHHHHHHHHHHHHHHHhc-CCCCeeEE
Confidence 368999999999999999999999999999999997642 1123456788999999999 59999999
Q ss_pred EEEEEc------CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC
Q 008197 175 YNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 248 (574)
Q Consensus 175 ~~~~~~------~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~ 248 (574)
+++|.. ..++|+|||||.+ ++++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 82 ~~~f~~~~~~~~~~~~~iv~Ey~~~-~l~~~~----~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~--- 153 (355)
T d2b1pa1 82 LNVFTPQKTLEEFQDVYLVMELMDA-NLCQVI----QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--- 153 (355)
T ss_dssp SEEECSCCSTTTCCEEEEEEECCSE-EHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---
T ss_pred EEEEecccccccCceeEEEEeccch-HHHHhh----hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---
Confidence 999963 4789999999965 455544 25689999999999999999999999999999999999998
Q ss_pred CCCCeEEEeeccccccCCCCCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHHHhC
Q 008197 249 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 249 ~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~ 327 (574)
.++.+|++|||+++...........+||+.|+|||++.+. +++++||||+||++|+|++|++||.+.+.......++..
T Consensus 154 ~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~ 233 (355)
T d2b1pa1 154 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233 (355)
T ss_dssp TTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHh
Confidence 4788999999999887766666778999999999998754 688999999999999999999999887766555554321
Q ss_pred ----------------------CCCCCCCCC----------------CCCCHHHHHHHHHccccCCCCCCCHHHHhcCcc
Q 008197 328 ----------------------KPDFRRKPW----------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 369 (574)
Q Consensus 328 ----------------------~~~~~~~~~----------------~~~~~~~~~li~~~L~~dp~~Rps~~~~l~hp~ 369 (574)
........+ ...++++.+||.+||..||++||||+|+|+|||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw 313 (355)
T d2b1pa1 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313 (355)
T ss_dssp HCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred ccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcc
Confidence 111111100 013567899999999999999999999999999
Q ss_pred cccc
Q 008197 370 VREG 373 (574)
Q Consensus 370 ~~~~ 373 (574)
|++.
T Consensus 314 ~~~~ 317 (355)
T d2b1pa1 314 INVW 317 (355)
T ss_dssp TGGG
T ss_pred cCCC
Confidence 9863
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-50 Score=398.23 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=199.9
Q ss_pred cceeecccccccCCeEEEEEEEcCCC----CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG----DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV 171 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~----~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni 171 (574)
..|++.++||+|+||.||+|.++.++ ..||||++.... .......+.+|+.+|++| +||||
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~~E~~il~~l-~H~nI 71 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--------------TEKQRVDFLGEAGIMGQF-SHHNI 71 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHTC-CCTTB
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--------------ChHHHHHHHHHHHHHHhc-CCCCE
Confidence 46999999999999999999987654 479999986541 123445789999999999 59999
Q ss_pred ceEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCC
Q 008197 172 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 251 (574)
Q Consensus 172 v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~ 251 (574)
|++++++.+.+.+++|||||.+|++.+.+.. ....+++..+..++.||+.||+|||+++|+||||||+|||++ .++
T Consensus 72 v~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~---~~~ 147 (283)
T d1mqba_ 72 IRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNL 147 (283)
T ss_dssp CCEEEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTC
T ss_pred eeeeEEEecCCceEEEEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC---CCC
Confidence 9999999999999999999999999887643 446799999999999999999999999999999999999998 478
Q ss_pred CeEEEeeccccccCCCC----CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCC-CCCCCChhHHHHHHH
Q 008197 252 SLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR-PFWDKTEDGIFKEVL 325 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~-Pf~~~~~~~~~~~i~ 325 (574)
.+||+|||+|+...... ......||+.|+|||++.+ .++.++|||||||++|||++|.. ||...+..+++..+.
T Consensus 148 ~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~ 227 (283)
T d1mqba_ 148 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 227 (283)
T ss_dssp CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred eEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHh
Confidence 99999999998764432 1234578999999998865 56889999999999999999554 455556666666665
Q ss_pred hCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 326 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+.. .+....+|+.+.+||.+||..||.+|||+.++++
T Consensus 228 ~~~~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 228 DGFR---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp TTCC---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ccCC---CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 5432 2223568899999999999999999999999875
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=402.15 Aligned_cols=253 Identities=24% Similarity=0.304 Sum_probs=200.8
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++++.||+|+||.||+|++.. +++.||||++.... .....+.+.+|..++.++.+|||
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--------------~~~~~~~~~~e~~~l~~~~~h~~ 78 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--------------THSEHRALMSELKILIHIGHHLN 78 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------------------CHHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--------------CcHHHHHHHHHHHHHHhhcCCCe
Confidence 579999999999999999999754 45689999986541 12345677889999999878999
Q ss_pred cceEEEEEEc-CCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEee
Q 008197 171 VVKFYNAFED-DNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 235 (574)
Q Consensus 171 iv~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHr 235 (574)
|+.+++++.. +..+++|||||++|+|.+++.... ...+++..+..++.||+.||.|||++|||||
T Consensus 79 iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHr 158 (299)
T d1ywna1 79 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 158 (299)
T ss_dssp BCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred EEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 9999998865 557999999999999999986542 2358999999999999999999999999999
Q ss_pred cCCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhC-CC
Q 008197 236 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RR 310 (574)
Q Consensus 236 Dlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg-~~ 310 (574)
||||+|||++ .++.+||+|||+|+...... .....+||+.|+|||++.+ .++.++|||||||++|||++| .+
T Consensus 159 DlKp~NILl~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~ 235 (299)
T d1ywna1 159 DLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 235 (299)
T ss_dssp CCCGGGEEEC---GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cCCccceeEC---CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCC
Confidence 9999999998 47899999999998654332 2345689999999998865 468899999999999999986 56
Q ss_pred CCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 311 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 311 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
||.+......+..++.....+. ..+.+++++.+||.+||+.||.+|||+.++++|
T Consensus 236 p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 236 PYPGVKIDEEFCRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp SSTTCCCSHHHHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCCCCC--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 7877766665555554433322 234688999999999999999999999999876
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-50 Score=404.30 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=204.8
Q ss_pred ceeecccccccCCeEEEEEEEcCCCC----EEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGD----RVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
+|++++.||+|+||+||+|++..+|+ .||||.+.... .....+.+.+|+.+|+++ +|||||
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~HpnIv 74 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--------------SPKANKEILDEAYVMASV-DNPHVC 74 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------------------CTHHHHHHHHHHHHHC-CCTTBC
T ss_pred HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--------------CHHHHHHHHHHHHHHHhC-CCCCEe
Confidence 69999999999999999999988876 57888775431 123456789999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.+++ .++++||+.+|+|.+.+.. ....+++..+..++.||+.||.|||++|||||||||+|||++. ++.
T Consensus 75 ~l~g~~~~~~-~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~---~~~ 149 (317)
T d1xkka_ 75 RLLGICLTST-VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---PQH 149 (317)
T ss_dssp CEEEEEESSS-EEEEEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---TTE
T ss_pred eEEEEEecCC-eeEEEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCC---CCC
Confidence 9999998755 6788899999999987754 3567999999999999999999999999999999999999984 789
Q ss_pred eEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhC
Q 008197 253 LKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN 327 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~ 327 (574)
+||+|||+|+....... .....||+.|+|||++.+ .++.++|||||||++|||+| |.+||.+.+..++...+..+
T Consensus 150 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~ 229 (317)
T d1xkka_ 150 VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 229 (317)
T ss_dssp EEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT
T ss_pred eEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC
Confidence 99999999987654332 234578999999998764 56889999999999999998 89999888888877777665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
... +..+.+|+++.+||.+||..||.+|||+.+++.|
T Consensus 230 ~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 230 ERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp CCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCC---CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 422 2225688999999999999999999999999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-50 Score=395.09 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=202.1
Q ss_pred cceeecccccccCCeEEEEEEEcC-CC--CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcc
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-NG--DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVV 172 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~--~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv 172 (574)
++|++.+.||+|+||.||+|++.. ++ ..||||++.+... ......+.+.+|+.+|+++ +|||||
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~------------~~~~~~~~~~~Ei~~l~~l-~H~nIv 74 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL------------SQPEAMDDFIREVNAMHSL-DHRNLI 74 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------------------CHHHHHHHHHHHHHHHC-CCTTBC
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhc------------CCHHHHHHHHHHHHHHHhC-CCCCEE
Confidence 469999999999999999998643 33 3689999876421 1223456799999999999 599999
Q ss_pred eEEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCC
Q 008197 173 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 252 (574)
Q Consensus 173 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~ 252 (574)
++++++.++ .+++|||||++|++.+.+... ...+++..+..++.||+.||.|||++||+||||||+|||++. ++.
T Consensus 75 ~~~g~~~~~-~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~---~~~ 149 (273)
T d1u46a_ 75 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDL 149 (273)
T ss_dssp CEEEEECSS-SCEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTE
T ss_pred EEEEEEeec-chheeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc---ccc
Confidence 999999764 678999999999999887654 356999999999999999999999999999999999999995 679
Q ss_pred eEEEeeccccccCCCCC----ccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHh
Q 008197 253 LKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR 326 (574)
Q Consensus 253 vkl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~ 326 (574)
+||+|||+++....... .....||+.|+|||++.+. ++.++|||||||++|||+| |++||.+.+..+....+..
T Consensus 150 vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~ 229 (273)
T d1u46a_ 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229 (273)
T ss_dssp EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT
T ss_pred eeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh
Confidence 99999999987654332 2345688899999988764 5788999999999999998 8999999999999888887
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHh
Q 008197 327 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 365 (574)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l 365 (574)
....++ ..+.+|+++.+||.+||..||.+|||+.+++
T Consensus 230 ~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~ 266 (273)
T d1u46a_ 230 EGERLP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266 (273)
T ss_dssp SCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 754432 3467899999999999999999999999986
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-50 Score=393.90 Aligned_cols=243 Identities=22% Similarity=0.328 Sum_probs=201.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
++|++++.||+|+||.||+|++ +|..||||++++. ...+.+.+|+.+++++ +||||++++
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~-----------------~~~~~~~~E~~~l~~l-~HpnIv~~~ 66 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----------------ATAQAFLAEASVMTQL-RHSNLVQLL 66 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-----------------C--HHHHHTHHHHTTC-CCTTBCCEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcH-----------------HHHHHHHHHHHHHHhC-CCCCEeeEE
Confidence 4699999999999999999986 4789999999764 2345788999999999 599999999
Q ss_pred EEEEc-CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++.+ .+.+|+||||+++|+|.+++.......+++..+..++.||+.||.|||+.+|+||||||+|||++ .++.+|
T Consensus 67 g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~---~~~~~k 143 (262)
T d1byga_ 67 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAK 143 (262)
T ss_dssp EEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEE
T ss_pred EEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec---CCCCEe
Confidence 99854 56789999999999999998665545689999999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCCccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CCCCCCCCChhHHHHHHHhCCCCCC
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR 332 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~ 332 (574)
|+|||+++..... .....+|+.|+|||++. +.+++++|||||||++|||+| |++||...+..++...+..+...
T Consensus 144 l~dfg~s~~~~~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~-- 219 (262)
T d1byga_ 144 VSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-- 219 (262)
T ss_dssp ECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC--
T ss_pred ecccccceecCCC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC--
Confidence 9999999875433 34457899999999875 567889999999999999998 79999888888888887654322
Q ss_pred CCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 333 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 333 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+..+.+++++.+||.+||..||.+|||+.++++
T Consensus 220 -~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 220 -DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 223467899999999999999999999999966
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=403.55 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=211.1
Q ss_pred cceeecccccccCCeEEEEEEEcCCCCE--EEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANGDR--VAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~--vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
++|++.+.||+|+||.||+|+++.+|.. ||||.+.... .....+.+.+|+.+|+++.+|||||+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~~HpnIv~ 75 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--------------SKDDHRDFAGELEVLCKLGHHPNIIN 75 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------------------CHHHHHHHHHTTCCCCTTBCC
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--------------ChHHHHHHHHHHHHHHhccCCCCEee
Confidence 5799999999999999999999888864 6777765431 12234578999999999866999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP 239 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp 239 (574)
+++++.+++.+|+|||||+||+|.+++... ....+++..+..++.||+.||.|||+++|+||||||
T Consensus 76 ~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp 155 (309)
T d1fvra_ 76 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAA 155 (309)
T ss_dssp EEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred EEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCcccccccc
Confidence 999999999999999999999999988543 246799999999999999999999999999999999
Q ss_pred CcEEEccCCCCCCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCC-CCCCCCCh
Q 008197 240 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTE 317 (574)
Q Consensus 240 ~Nill~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~-~Pf~~~~~ 317 (574)
+|||++. ++.+||+|||+|+............||+.|+|||.+.+ .++.++|||||||++|||++|. +||.+.+.
T Consensus 156 ~NIL~~~---~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~ 232 (309)
T d1fvra_ 156 RNILVGE---NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 232 (309)
T ss_dssp GGEEECG---GGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred ceEEEcC---CCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH
Confidence 9999984 78999999999987665555556689999999998864 5688999999999999999965 67888888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
.+++..+..+.. ...+..+|+++.+||.+||+.||++|||+.+++++
T Consensus 233 ~~~~~~i~~~~~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 233 AELYEKLPQGYR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp HHHHHHGGGTCC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHhcCC---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 888887766532 23345789999999999999999999999999875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-49 Score=394.48 Aligned_cols=251 Identities=25% Similarity=0.389 Sum_probs=209.0
Q ss_pred cceeecccccccCCeEEEEEEEcCCC-------CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKANG-------DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH 168 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~~~-------~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h 168 (574)
++|++++.||+|+||.||+|++..++ ..||||++++.. .......+.+|..++.++.+|
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~~e~~~l~~~~~H 78 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--------------TEKDLSDLISEMEMMKMIGKH 78 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--------------CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--------------ChHHHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999876554 479999987642 123456788999999999779
Q ss_pred CCcceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 169 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 169 pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
||||+++++|.+++.+++|||||++|+|.+++.... ...+++..+..++.||+.||+|||+++|||
T Consensus 79 pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivH 158 (299)
T d1fgka_ 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 158 (299)
T ss_dssp TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEe
Confidence 999999999999999999999999999999986443 246899999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCC---CccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||+++...... .....+||+.|+|||++. +.++.++|||||||++|||++ |.
T Consensus 159 rDiKp~NiLl~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~ 235 (299)
T d1fgka_ 159 RDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235 (299)
T ss_dssp SCCSGGGEEEC---TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred eeecccceeec---CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCC
Confidence 99999999998 47899999999998764332 234568999999999875 567899999999999999998 79
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+||.+.+...++..+..+. .+ ...+.+|+++.+||.+||+.||.+|||+.++++
T Consensus 236 ~p~~~~~~~~~~~~i~~~~-~~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 236 SPYPGVPVEELFKLLKEGH-RM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp CSSTTCCHHHHHHHHHTTC-CC--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCC-CC--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 9998888887777766543 22 223568999999999999999999999999976
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.6e-49 Score=394.86 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=211.0
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++++.||+|+||+||+|+++ .+++.||||++.... .....+.+.+|+.+|+++ +|||
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--------------~~~~~~~~~~E~~il~~l-~h~n 77 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--------------SADMQADFQREAALMAEF-DNPN 77 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--------------CHHHHHHHHHHHHHHHTC-CCTT
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--------------ChHHHHHHHHHHHHHHhc-CCCC
Confidence 57999999999999999999875 356789999986541 123456789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHH
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECH 228 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~l~~LH 228 (574)
|+++++++.+.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||
T Consensus 78 iv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH 157 (301)
T d1lufa_ 78 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS 157 (301)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999885421 234889999999999999999999
Q ss_pred HCCCEeecCCCCcEEEccCCCCCCeEEEeeccccccCCC---CCccccccCccccchHhhhc-CCCCCcchHhHHHHHHH
Q 008197 229 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYI 304 (574)
Q Consensus 229 ~~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~e 304 (574)
+++||||||||+|||++. ++.+||+|||+|+...+. ......+||+.|+|||++.+ .++.++|||||||++||
T Consensus 158 ~~~ivHrDlKp~NILld~---~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~e 234 (301)
T d1lufa_ 158 ERKFVHRDLATRNCLVGE---NMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 234 (301)
T ss_dssp HTTCCCSCCSGGGEEECG---GGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred cCCeEeeEEcccceEECC---CCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHH
Confidence 999999999999999984 789999999999865432 22345689999999998865 56889999999999999
Q ss_pred HHhCC-CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 305 LLCGR-RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 305 lltg~-~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
|++|. +||.+.+..++...+..+... +....+|+++.+||.+||+.||++|||+.++++
T Consensus 235 ll~~~~~p~~~~~~~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 235 IFSYGLQPYYGMAHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp HHTTTCCTTTTSCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHccCCCCCCCCCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99985 688888888888888776532 223568999999999999999999999999854
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-49 Score=392.64 Aligned_cols=252 Identities=26% Similarity=0.324 Sum_probs=212.4
Q ss_pred cceeecccccccCCeEEEEEEEc-----CCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDK-----ANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|++++.||+|+||.||+|++. .+++.||||+++... .......+.+|+.+++.+.+|||
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--------------~~~~~~~~~~E~~~~~~l~~Hpn 88 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--------------HLTEREALMSELKVLSYLGNHMN 88 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--------------CHHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--------------CHHHHHHHHHHHHHHHhccCCCC
Confidence 58999999999999999999863 466799999997642 12345678999999999977999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEe
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK----------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVH 234 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiH 234 (574)
||++++++.+.+.+|||||||++|+|.+++.... ...+++..+..++.||+.||.|||+++|||
T Consensus 89 Iv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivH 168 (311)
T d1t46a_ 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIH 168 (311)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 9999999999999999999999999999886542 236899999999999999999999999999
Q ss_pred ecCCCCcEEEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHh-CC
Q 008197 235 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GR 309 (574)
Q Consensus 235 rDlkp~Nill~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~ellt-g~ 309 (574)
|||||+|||++ .++.+||+|||+++....... ....+||+.|+|||++.. .++.++|||||||++|||+| |.
T Consensus 169 rDLKp~NIl~~---~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~ 245 (311)
T d1t46a_ 169 RDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245 (311)
T ss_dssp SCCSGGGEEEE---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccccccccc---ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCC
Confidence 99999999998 478999999999987654332 234689999999998864 56889999999999999998 66
Q ss_pred CCCCCCChhHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 310 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 310 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
+||......+.+..++........ ...+|+.+.+||.+||+.||.+|||+.++++
T Consensus 246 p~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 246 SPYPGMPVDSKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp CSSTTCCSSHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 667676776666666655433222 2457899999999999999999999999875
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-49 Score=392.03 Aligned_cols=256 Identities=20% Similarity=0.302 Sum_probs=216.2
Q ss_pred cceeecccccccCCeEEEEEEEcC-----CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCC
Q 008197 96 RRYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHEN 170 (574)
Q Consensus 96 ~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpn 170 (574)
++|.+++.||+|+||.||+|.++. ++..||||+++... .......+.+|+.+++++ +|||
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--------------~~~~~~~~~~E~~il~~l-~h~n 84 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--------------SMRERIEFLNEASVMKEF-NCHH 84 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--------------CHHHHHHHHHHHHHGGGC-CCTT
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--------------ChHHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999998753 35789999987542 123345789999999999 5999
Q ss_pred cceEEEEEEcCCEEEEEEeccCCCchHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcE
Q 008197 171 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 242 (574)
Q Consensus 171 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Ni 242 (574)
||++++++..++..++|||||++|+|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+||
T Consensus 85 Iv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~Ni 164 (308)
T d1p4oa_ 85 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 164 (308)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGE
T ss_pred EeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCce
Confidence 9999999999999999999999999999875432 23578999999999999999999999999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCCC---ccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhC-CCCCCCCCh
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTE 317 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg-~~Pf~~~~~ 317 (574)
|++ .++.+||+|||+|+....... ....+||+.|+|||.+.+ .++.++|||||||++|||+|| .+||.+.+.
T Consensus 165 Lld---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~ 241 (308)
T d1p4oa_ 165 MVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 241 (308)
T ss_dssp EEC---TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred eec---CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH
Confidence 998 578999999999986643322 234579999999998865 457899999999999999998 588888888
Q ss_pred hHHHHHHHhCCCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc------Cccccc
Q 008197 318 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE 372 (574)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~------hp~~~~ 372 (574)
.+.+..+..+... ...+.+|+.+.+||.+||+.||.+|||+.++++ +|+|++
T Consensus 242 ~~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~ 299 (308)
T d1p4oa_ 242 EQVLRFVMEGGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299 (308)
T ss_dssp HHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred HHHHHHHHhCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence 8888888776532 222568899999999999999999999999987 666654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.1e-49 Score=392.96 Aligned_cols=261 Identities=21% Similarity=0.301 Sum_probs=205.9
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||+||+|++..+|+.||||++.... ..+.+..|+++++.+.+|++|+.
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----------------~~~~~~~E~~i~~~l~~~~~i~~ 67 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----------------KHPQLHIESKIYKMMQGGVGIPT 67 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-----------------TSCCHHHHHHHHHHSTTSTTCCC
T ss_pred ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-----------------cCHHHHHHHHHHHHccCCCcccE
Confidence 3468999999999999999999999999999999876541 11246789999999975556677
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCe
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 253 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~v 253 (574)
+..++.+.+..++||||+ +++|.+.+. .....+++..+..++.||+.||+|||++|||||||||+|||++..+.+..+
T Consensus 68 ~~~~~~~~~~~~ivme~~-~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~v 145 (299)
T d1ckia_ 68 IRWCGAEGDYNVMVMELL-GPSLEDLFN-FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 145 (299)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCE
T ss_pred EEEEEecCCEEEEEEEEc-CCchhhhhh-hccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCcee
Confidence 777778899999999999 556666553 345689999999999999999999999999999999999999865567789
Q ss_pred EEEeeccccccCCCC--------CccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChhHHHHHH
Q 008197 254 KATDFGLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 324 (574)
Q Consensus 254 kl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~i 324 (574)
||+|||+|+...... .....+||+.|+|||++.+. ++.++|||||||++|||++|+.||...........+
T Consensus 146 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~ 225 (299)
T d1ckia_ 146 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 225 (299)
T ss_dssp EECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------H
T ss_pred eeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHH
Confidence 999999998765332 23456899999999998765 688999999999999999999999776544333222
Q ss_pred H---hCCCCC-CCCCCCCCCHHHHHHHHHccccCCCCCCCHH---HHhcCcccccc
Q 008197 325 L---RNKPDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREG 373 (574)
Q Consensus 325 ~---~~~~~~-~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~---~~l~hp~~~~~ 373 (574)
. ...... .....+.+|+++.+||.+||..+|.+||++. ++|+|+|.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~ 281 (299)
T d1ckia_ 226 ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281 (299)
T ss_dssp HHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence 1 111111 1112356889999999999999999999987 45678776543
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-47 Score=380.13 Aligned_cols=247 Identities=21% Similarity=0.247 Sum_probs=199.6
Q ss_pred eecccccccCCeEEEEEEEcCCC---CEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEE
Q 008197 99 TIGKLLGHGQFGYTYVATDKANG---DRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFY 175 (574)
Q Consensus 99 ~~~~~lG~G~~g~Vy~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~ 175 (574)
...++||+|+||+||+|++..++ ..||||++.+.. .....+.+.+|+++|++| +|||||+++
T Consensus 30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~~E~~~l~~l-~HpnIv~~~ 94 (311)
T d1r0pa_ 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--------------DIGEVSQFLTEGIIMKDF-SHPNVLSLL 94 (311)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--------------CHHHHHHHHHHHHHHHTC-CCTTBCCCC
T ss_pred ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc--------------CHHHHHHHHHHHHHHHhC-CCCCEeEEe
Confidence 33578999999999999986643 368999986431 234457899999999999 599999999
Q ss_pred EEEEc-CCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 176 NAFED-DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 176 ~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++.. ++.+++|||||++|+|.+++.. ....+++..+..++.|++.||.|||+.+|+||||||+|||++ +++.+|
T Consensus 95 g~~~~~~~~~~lv~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~---~~~~~k 170 (311)
T d1r0pa_ 95 GICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVK 170 (311)
T ss_dssp EEEEETTTEEEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEE
T ss_pred EEEEecCCceEEEEEEeecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC---CCCCEE
Confidence 99765 6789999999999999987643 445678899999999999999999999999999999999998 478999
Q ss_pred EEeeccccccCCCCC-----ccccccCccccchHhhh-cCCCCCcchHhHHHHHHHHHhCCCCCCCC-ChhHHHHHHHhC
Q 008197 255 ATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRN 327 (574)
Q Consensus 255 l~DFG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~-~~~~~~~DvwSlG~il~elltg~~Pf~~~-~~~~~~~~i~~~ 327 (574)
|+|||+++....... .....||+.|+|||++. +.++.++|||||||++|||+||..||... +...+...+..+
T Consensus 171 L~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g 250 (311)
T d1r0pa_ 171 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 250 (311)
T ss_dssp ECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTT
T ss_pred EecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC
Confidence 999999987643322 23457999999999876 56788999999999999999977777654 344455566665
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhcC
Q 008197 328 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 367 (574)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~h 367 (574)
..... .+.+++++.+||.+||..||.+|||+.++++|
T Consensus 251 ~~~~~---p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 251 RRLLQ---PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp CCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCC---cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 43221 24578999999999999999999999999876
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.1e-47 Score=377.84 Aligned_cols=254 Identities=20% Similarity=0.315 Sum_probs=206.8
Q ss_pred cccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 94 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
+.++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+|+++++.|.+|+|++.
T Consensus 3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-----------------~~~~~~~e~~~~~~l~~~~~i~~ 65 (293)
T d1csna_ 3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----------------DAPQLRDEYRTYKLLAGCTGIPN 65 (293)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----------------TSCCHHHHHHHHHHTTTCTTCCC
T ss_pred CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-----------------CcHHHHHHHHHHHHhcCCCCCCE
Confidence 4578999999999999999999999999999999886531 12346789999999987799999
Q ss_pred EEEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCC--CCC
Q 008197 174 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDS 251 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~--~~~ 251 (574)
+++++......|+||||+ +++|.+.+. .....+++..+..++.|++.||+|||++|||||||||+|||++... ..+
T Consensus 66 ~~~~~~~~~~~~~vme~~-~~~l~~~~~-~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~ 143 (293)
T d1csna_ 66 VYYFGQEGLHNVLVIDLL-GPSLEDLLD-LCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 143 (293)
T ss_dssp EEEEEEETTEEEEEEECC-CCBHHHHHH-HTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTT
T ss_pred EEEEeecCCccEEEEEec-CCCHHHHHH-hhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCC
Confidence 999999999999999999 789988764 3456799999999999999999999999999999999999997422 357
Q ss_pred CeEEEeeccccccCCC--------CCccccccCccccchHhhhcC-CCCCcchHhHHHHHHHHHhCCCCCCCCChh---H
Q 008197 252 SLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED---G 319 (574)
Q Consensus 252 ~vkl~DFG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~DvwSlG~il~elltg~~Pf~~~~~~---~ 319 (574)
.+||+|||+|+..... ......+||+.|||||++.+. ++.++|||||||++|||++|+.||.+.... .
T Consensus 144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~ 223 (293)
T d1csna_ 144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 223 (293)
T ss_dssp CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence 8999999999875432 123456899999999998765 688999999999999999999999765432 2
Q ss_pred HHHHHHhCCCCC-CCCCCCCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 320 IFKEVLRNKPDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 320 ~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
.+..+....... .....+.+|+++.+++..|+..+|.+||+++.+.+
T Consensus 224 ~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 224 KYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 333333221111 11123568899999999999999999999877643
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-47 Score=377.26 Aligned_cols=247 Identities=22% Similarity=0.283 Sum_probs=187.4
Q ss_pred ccceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 95 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
.++|.+.+.||+|+||.||+|++ +|+.||||++.... ........|+..+..+ +|||||++
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~----------------~~~~~~e~ei~~~~~~-~HpnIv~~ 62 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----------------ERSWFREAEIYQTVML-RHENILGF 62 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG----------------HHHHHHHHHHHTSTTC-CCTTBCCE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----------------hhHHHHHHHHHHHhhC-CCCcCcce
Confidence 46799999999999999999974 68999999986541 1112223455555567 59999999
Q ss_pred EEEEEcCC----EEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEeecCCCCcE
Q 008197 175 YNAFEDDN----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--------HGLVHRDMKPENF 242 (574)
Q Consensus 175 ~~~~~~~~----~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--------~~iiHrDlkp~Ni 242 (574)
++++.+.+ .+|+|||||++|+|.+++.. ..+++..+..++.|++.||.|||+ +|||||||||+||
T Consensus 63 ~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NI 139 (303)
T d1vjya_ 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139 (303)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGE
T ss_pred EEEEEeCCCcceEEEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccce
Confidence 99997643 68999999999999998853 368999999999999999999996 5999999999999
Q ss_pred EEccCCCCCCeEEEeeccccccCCCC-----CccccccCccccchHhhhcC-------CCCCcchHhHHHHHHHHHhCCC
Q 008197 243 LFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRR 310 (574)
Q Consensus 243 ll~~~~~~~~vkl~DFG~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-------~~~~~DvwSlG~il~elltg~~ 310 (574)
|++ .++.+||+|||+++...... .....+||+.|+|||++.+. ++.++|||||||+||||+||.+
T Consensus 140 Ll~---~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~ 216 (303)
T d1vjya_ 140 LVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216 (303)
T ss_dssp EEC---TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred EEc---CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCC
Confidence 998 47899999999998764432 23456899999999998754 3557899999999999999988
Q ss_pred CCCCCC--------------hhHHHHHHH-hCCCCCCC-CCC--CCCCHHHHHHHHHccccCCCCCCCHHHHhc
Q 008197 311 PFWDKT--------------EDGIFKEVL-RNKPDFRR-KPW--PSISNSAKDFVKKLLVKDPRARLTAAQALS 366 (574)
Q Consensus 311 Pf~~~~--------------~~~~~~~i~-~~~~~~~~-~~~--~~~~~~~~~li~~~L~~dp~~Rps~~~~l~ 366 (574)
||.... ......... ........ ..+ ...+..+.+|+.+||..||.+|||+.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 873211 112222222 22211110 011 112235889999999999999999999865
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.4e-45 Score=371.56 Aligned_cols=269 Identities=25% Similarity=0.418 Sum_probs=201.2
Q ss_pred ccccc-cceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhc---
Q 008197 91 DKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALA--- 166 (574)
Q Consensus 91 ~~~~~-~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~--- 166 (574)
++.+. .+|++++.||+|+||+||+|+++.+|+.||||++++.. ...+.+.+|+.+++.+.
T Consensus 7 g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----------------~~~~~~~~Ei~~l~~l~~~~ 70 (362)
T d1q8ya_ 7 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----------------VYTEAAEDEIKLLQRVNDAD 70 (362)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----------------HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----------------cchHHHHHHHHHHHHhcchh
Confidence 34443 47999999999999999999999999999999997652 23356778888888774
Q ss_pred -------CCCCcceEEEEEEc--CCEEEEEEeccCCCch-HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEee
Q 008197 167 -------GHENVVKFYNAFED--DNYVYIAMELCEGGEL-LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHR 235 (574)
Q Consensus 167 -------~hpniv~~~~~~~~--~~~~~lv~e~~~gg~L-~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~iiHr 235 (574)
.||||+++++++.. ....+++++++..+.. ...........+++..++.++.||+.||.|||+ .||+||
T Consensus 71 ~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHr 150 (362)
T d1q8ya_ 71 NTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHT 150 (362)
T ss_dssp CSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECS
T ss_pred hhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccc
Confidence 36889999998864 4567777777655543 333444556789999999999999999999998 899999
Q ss_pred cCCCCcEEEccCCCC---CCeEEEeeccccccCCCCCccccccCccccchHhhhc-CCCCCcchHhHHHHHHHHHhCCCC
Q 008197 236 DMKPENFLFKSAKED---SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP 311 (574)
Q Consensus 236 Dlkp~Nill~~~~~~---~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DvwSlG~il~elltg~~P 311 (574)
||||+|||++..+.. ..++|+|||.|..... .....+||+.|+|||++.. .++.++||||+||++++|++|+.|
T Consensus 151 DlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~p 228 (362)
T d1q8ya_ 151 DIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 228 (362)
T ss_dssp CCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred cCChhHeeeeccCcccccceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCC
Confidence 999999999852211 2499999999976543 2345689999999998764 568899999999999999999999
Q ss_pred CCCCChh------HHHHHHHh--CC-------------------------CCCC-----------CCCCCCCCHHHHHHH
Q 008197 312 FWDKTED------GIFKEVLR--NK-------------------------PDFR-----------RKPWPSISNSAKDFV 347 (574)
Q Consensus 312 f~~~~~~------~~~~~i~~--~~-------------------------~~~~-----------~~~~~~~~~~~~~li 347 (574)
|...... ......+. +. .... ...++..++++.+||
T Consensus 229 F~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll 308 (362)
T d1q8ya_ 229 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFL 308 (362)
T ss_dssp C---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHH
Confidence 9654321 11111110 00 0000 000122456789999
Q ss_pred HHccccCCCCCCCHHHHhcCccccccCCCC
Q 008197 348 KKLLVKDPRARLTAAQALSHPWVREGGDAS 377 (574)
Q Consensus 348 ~~~L~~dp~~Rps~~~~l~hp~~~~~~~~~ 377 (574)
.+||..||.+||||+|+|+||||++.....
T Consensus 309 ~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~~ 338 (362)
T d1q8ya_ 309 SPMLQLDPRKRADAGGLVNHPWLKDTLGME 338 (362)
T ss_dssp GGGGCSSTTTCBCHHHHHTCGGGTTCTTCT
T ss_pred HHHCCCChhHCcCHHHHhcCcccCCCCCcc
Confidence 999999999999999999999999764433
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=2.3e-26 Score=211.37 Aligned_cols=178 Identities=21% Similarity=0.189 Sum_probs=125.4
Q ss_pred eeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhh-hh--hhhccchhhHHHHHHHHHHHHHhcCCCCcceE
Q 008197 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVS-FQ--DLKMILPIAVEDVKREVKILQALAGHENVVKF 174 (574)
Q Consensus 98 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~ 174 (574)
+.++++||+|+||.||+|++. +|+.||||+++......+... .. ..............+|+..+.++ .|++++..
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~ 79 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKV 79 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceE
Confidence 468899999999999999974 789999998865432111000 00 00011112334567789999999 59999998
Q ss_pred EEEEEcCCEEEEEEeccCCCchHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCEeecCCCCcEEEccCCCCCCeE
Q 008197 175 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 254 (574)
Q Consensus 175 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~vk 254 (574)
+++.. .++||||++++.+.+ ++...+..++.||+.+|.|||++||+||||||+|||++ +..++
T Consensus 80 ~~~~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~----~~~~~ 142 (191)
T d1zara2 80 YAWEG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIW 142 (191)
T ss_dssp EEEET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEE
T ss_pred EEecC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee----CCCEE
Confidence 87532 279999998865432 45566788999999999999999999999999999998 34599
Q ss_pred EEeeccccccCCCCCccccccCccccc------hHhhhcCCCCCcchHhHHHH
Q 008197 255 ATDFGLSDFIKPGKKFQDIVGSAYYVA------PEVLKRKSGPESDVWSIGVI 301 (574)
Q Consensus 255 l~DFG~a~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~~DvwSlG~i 301 (574)
|+|||+|........ ..|.. .+.+...++.++|+||+.--
T Consensus 143 liDFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~ 188 (191)
T d1zara2 143 IIDFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDR 188 (191)
T ss_dssp ECCCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred EEECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence 999999976542221 11222 23455677899999998643
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=99.87 E-value=3.7e-22 Score=174.54 Aligned_cols=138 Identities=29% Similarity=0.534 Sum_probs=122.4
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++++++++|+++|..+|.|++|+|+.+||..++.. .+..++...+..++..+|.+++|.|+|+||+..+.......
T Consensus 2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-- 78 (146)
T d1exra_ 2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQ-- 78 (146)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHh-cCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhcc--
Confidence 478899999999999999999999999999999955 78899999999999999999999999999998765432211
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
.....++.+|+.+|.|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+++|.
T Consensus 79 ---~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 79 ---DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp ---HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred ---ChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 1234688899999999999999999999998776 489999999999999999999999985
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=3.3e-22 Score=174.89 Aligned_cols=139 Identities=30% Similarity=0.505 Sum_probs=123.5
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++++++++|..||.|++|+|+.+||..++.. .|..+++..+..++..++.++++.++|++|+..+........
T Consensus 2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T d1lkja_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND 80 (146)
T ss_dssp CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh-cCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence 5689999999999999999999999999999999955 899999999999999999999999999999987654433222
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
....++.||+.||+|++|+|+.+||+.++..+| ++..+|+.+| |+||+|+|+||+++|.+
T Consensus 81 -----~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k 146 (146)
T d1lkja_ 81 -----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 146 (146)
T ss_dssp -----HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred -----HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence 134678899999999999999999999998777 4899999999 99999999999999863
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.86 E-value=3.2e-22 Score=173.95 Aligned_cols=134 Identities=19% Similarity=0.369 Sum_probs=116.2
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
++++++++++++|..||.|++|.|+..||..+| +.+|..++..++..++. +++|.|+|+||+..+...... ..
T Consensus 1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l-~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~--~~ 73 (142)
T d1wdcb_ 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAIS-EQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG--TD 73 (142)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHH-HHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS--CC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHH-HHhhcCCCHHHHHHHHH----hccCccccccccccccccccc--cc
Confidence 478999999999999999999999999999999 45899999999998884 578999999999887643222 22
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
. ...++.+|+.||+|++|+|+.+||+.++..+| +++++|+.+|.| +|+|+|+||+.+|++.
T Consensus 74 ~---~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~ 140 (142)
T d1wdcb_ 74 S---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS 140 (142)
T ss_dssp C---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred h---hhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence 2 23678899999999999999999999998877 489999999998 6999999999999853
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.86 E-value=6.3e-22 Score=176.35 Aligned_cols=143 Identities=28% Similarity=0.476 Sum_probs=125.0
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++++++++|+++|..+|+|++|+|+.+||..++. .++..+++..+..++..+|.+++|.|+|.||+..+...... .
T Consensus 13 ~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~--~ 89 (162)
T d1topa_ 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE--D 89 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH--H
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHh-ccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhh--h
Confidence 47889999999999999999999999999999995 58999999999999999999999999999998766543221 1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
....+...++.+|+.+|.|++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+++|.+.
T Consensus 90 ~~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 161 (162)
T d1topa_ 90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred cccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence 2223445778899999999999999999999998776 48999999999999999999999999864
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.85 E-value=1.8e-21 Score=172.23 Aligned_cols=146 Identities=26% Similarity=0.468 Sum_probs=124.1
Q ss_pred hccccchHHhhhhccccccccCCC-CCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~-~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
....++++++++++++|..||.|+ ||.|+..||..+|. .+|..++..++..++..++.+++|.+++++|...+.....
T Consensus 4 ~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (156)
T d1dtla_ 4 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK 82 (156)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC
T ss_pred HHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHH-HcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccc
Confidence 345789999999999999999995 89999999999995 5999999999999999999999999999999876554322
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.... ......++.+|+.||.|++|+|+.+||+.++...+ ++..+|+.+|.|+||.|+|+||+++|+++
T Consensus 83 ~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g~ 156 (156)
T d1dtla_ 83 DDSK--GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 156 (156)
T ss_dssp -------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred cccc--ccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcCC
Confidence 2111 11234688899999999999999999999998877 48999999999999999999999999863
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.85 E-value=1e-21 Score=168.95 Aligned_cols=130 Identities=25% Similarity=0.370 Sum_probs=113.8
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHH
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 498 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~ 498 (574)
..+|..+|.|+||.|+..||..++. .++..+++++++.+|..+|.+++|.|+|+||+..+..... .........++
T Consensus 3 e~~F~~~D~d~dG~is~~E~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~---~~~~~~~~~~~ 78 (134)
T d1jfja_ 3 EALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQG---QDLSDDKIGLK 78 (134)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHH-TTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSC---CSSHHHHHHHH
T ss_pred HHHHHHHcCCCcCCCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhhhcccccccccccccccccccc---ccccccccccc
Confidence 4689999999999999999999995 5899999999999999999999999999999987654322 12223345688
Q ss_pred HHHHhcCCCCCCcccHHHHHHhhcccCc--HHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 499 AAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 499 ~~F~~~D~d~~G~I~~~El~~~l~~~~~--~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
.+|+.+|.|++|+|+.+|++.++...+. +.++|..+|.|+||.|+|+||+++|.
T Consensus 79 ~~F~~~D~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~D~d~dG~is~~EF~~~~l 134 (134)
T d1jfja_ 79 VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFSL 134 (134)
T ss_dssp HHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHHC
T ss_pred ccccccccccCCcccHHHHHHHHHhcCcHHHHHHHHHHCCCCCCCCCHHHHHHHhC
Confidence 8999999999999999999999988874 88899999999999999999999873
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.5e-21 Score=168.13 Aligned_cols=135 Identities=27% Similarity=0.478 Sum_probs=120.0
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccch
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 490 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~ 490 (574)
++++.++|+++|..+|+|++|+|+..||..++. ..|..++...+..++..+|.+++|.|+|+||+..+......
T Consensus 1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~----- 74 (141)
T d2obha1 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMR-ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE----- 74 (141)
T ss_dssp CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHH-hcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhh-----
Confidence 467888999999999999999999999999995 48999999999999999999999999999999876543221
Q ss_pred HHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 491 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 491 ~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
......++.+|+.+|.+++|.|+.+||+.++...| ++..+|+.+|.|+||.|+|+||+++|
T Consensus 75 ~~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m 141 (141)
T d2obha1 75 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141 (141)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred hccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence 11235688999999999999999999999998877 49999999999999999999999987
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.84 E-value=1.3e-21 Score=170.84 Aligned_cols=134 Identities=16% Similarity=0.268 Sum_probs=113.3
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC--CCcceehhchHHHHhhhhcccccchHH
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLEEHDSEK 492 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d--~dg~I~f~EF~~~~~~~~~~~~~~~~~ 492 (574)
.++++++|..||.|++|+|+.+||..+| +.+|..++..++..++..++.+ ++|.|+|+||+..+..........
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l-~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~--- 78 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIA-RALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQG--- 78 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHH-HHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccc---
Confidence 4678999999999999999999999999 5589999999999999988766 688999999998776433222111
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 493 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 493 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
....++.+|+.||+|++|+|+.+||+.++..+| +++.+++. |.|+||.|+|+||+++|..
T Consensus 79 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~eF~~~ll~ 144 (145)
T d2mysc_ 79 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS 144 (145)
T ss_pred hHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHHHHHHHHhc
Confidence 133688899999999999999999999998877 38888874 8899999999999998863
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=99.84 E-value=1.4e-21 Score=171.90 Aligned_cols=138 Identities=22% Similarity=0.397 Sum_probs=116.8
Q ss_pred cchHHhhhhccccccccC--CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 410 LDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~--d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
++++++++++++|..||. |++|.|+..||..+| +.+|..++++++..+. ..|.+++|.|+|+||+.++........
T Consensus 1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l-~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~ 78 (152)
T d1wdcc_ 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQ 78 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHH-HHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHhccCccHhhhhhhh-hhhccccccccccccccccccccccch
Confidence 477899999999999995 899999999999999 5599999999998764 468889999999999988765433222
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCC--CCCcccHHHHHHHHHh
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADID--KDGRISLSEFRRLLRT 553 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d--~dG~i~~~EF~~~~~~ 553 (574)
.. ...+..+|+.||.|++|+|+.+||+.++..+| +++++++.+|.+ ++|.|+|+||++.|..
T Consensus 79 ~~----~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~ 148 (152)
T d1wdcc_ 79 GT----FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148 (152)
T ss_dssp CC----HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred hH----HHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence 21 23577899999999999999999999998887 489999999865 5689999999999873
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.83 E-value=1.9e-21 Score=176.46 Aligned_cols=141 Identities=35% Similarity=0.639 Sum_probs=124.7
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++++++++|+++|+.+|.|++|+|+.+||..++ +.++..++..+++.++..+|.+++|.|+|.+|+..+........
T Consensus 2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l-~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 80 (182)
T d1s6ia_ 2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER 80 (182)
T ss_dssp CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHH-TTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHH-HHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence 46788999999999999999999999999999999 45899999999999999999999999999999987655433322
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
. ..++.+|+.+|.+++|+|+.+||+.++...+ +++.+|+.+|.|+||.|+|+||+++|++..
T Consensus 81 ~------e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~ 146 (182)
T d1s6ia_ 81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (182)
T ss_dssp C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred H------HHHHHHHHHHhhcCCCccchhhhhhhhhhcCccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCc
Confidence 1 1466799999999999999999999998766 589999999999999999999999998654
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.83 E-value=2.8e-21 Score=167.43 Aligned_cols=129 Identities=20% Similarity=0.309 Sum_probs=110.2
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
..+++++|..||.|++|.|+..||..+| +.+|..++.+++..+ +.+++|.|+|+||+.++........... .
T Consensus 4 ~~~fke~F~~~D~d~dG~I~~~el~~~l-~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~---~ 75 (140)
T d1ggwa_ 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGD---P 75 (140)
T ss_dssp CTTTHHHHHHTCSSSSSEECHHHHHHHH-HHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCC---H
T ss_pred HHHHHHHHHHHCCCCCCeECHHHHHHHH-HHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhH---H
Confidence 3688999999999999999999999999 559999999887654 6788999999999998764433222222 2
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..++.+|+.||+|++|+|+.+||+.++..+| +++.+++.+|.| ||.|+|+||+++|.
T Consensus 76 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~ 138 (140)
T d1ggwa_ 76 EEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence 3678899999999999999999999998776 489999999988 99999999999986
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=5e-21 Score=170.86 Aligned_cols=145 Identities=28% Similarity=0.459 Sum_probs=120.5
Q ss_pred hccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 406 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
|.+.++++++++|+++|..+|+|++|+|+.+||..++.. +.. +.++.+|..+|.+++|.|+|+||+..+......
T Consensus 6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~--~~~---~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~ 80 (165)
T d1auib_ 6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL--QQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK 80 (165)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHH--HTC---TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT
T ss_pred HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhc--cCC---HHHHHHHHHHccccchhhhhhhhhhhccccccc
Confidence 567899999999999999999999999999999887633 222 356789999999999999999999887654322
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.. ....++.+|+.+|.|++|+|+.+||+.++.... .+..+|..+|.|+||.|+|+||+.+|.+.
T Consensus 81 ~~-----~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 81 GD-----KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp CC-----HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred hh-----hHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 11 134678899999999999999999998875431 26789999999999999999999999987
Q ss_pred ccCCCC
Q 008197 555 SISSRN 560 (574)
Q Consensus 555 ~~~~~~ 560 (574)
.+..+.
T Consensus 156 ~~~~k~ 161 (165)
T d1auib_ 156 DIHKKM 161 (165)
T ss_dssp CGGGGC
T ss_pred ChhhCc
Confidence 766554
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.82 E-value=3.6e-21 Score=168.13 Aligned_cols=136 Identities=18% Similarity=0.261 Sum_probs=111.9
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHh-hcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~-~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
.++++|..||.|++|+|+.+||..+|. .+|..++.++++.++.. .+.+.+|.|+|+||+..+................
T Consensus 3 ~~k~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~ 81 (146)
T d1m45a_ 3 ANKDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE 81 (146)
T ss_dssp CCTTCHHHHCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHH-HcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHH
Confidence 579999999999999999999999995 58999999999999975 4556678999999998876443222111111123
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.+..+|+.||.+++|+|+.+||+.++...| ++..+|..+|.|+||.|+|+||++.|.+
T Consensus 82 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~ 145 (146)
T d1m45a_ 82 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR 145 (146)
T ss_dssp HHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred HHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence 678899999999999999999999998877 4899999999999999999999988763
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.82 E-value=8.2e-21 Score=165.55 Aligned_cols=136 Identities=18% Similarity=0.281 Sum_probs=113.2
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
|+++++.+++++|..+|.|++|+|+..||..+| +.+|..++..+ ++..++.+++|.|+|+||+..+........
T Consensus 1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l-~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~-- 74 (145)
T d2mysb_ 1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETF-AAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGAD-- 74 (145)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccc--
Confidence 578899999999999999999999999999999 55887655443 344556678999999999987754322211
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
. ...++.+|+.||.+++|+|+.+||+.++...| ++..+++.+|.|+||.|+|.||+++|...
T Consensus 75 ~---~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~ 142 (145)
T d2mysb_ 75 P---EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG 142 (145)
T ss_pred h---HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccC
Confidence 1 23688899999999999999999999998877 48999999999999999999999999743
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.80 E-value=6.3e-20 Score=166.24 Aligned_cols=126 Identities=25% Similarity=0.396 Sum_probs=113.8
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
+.++|+++|..+|.|++|+|+.+||..+| +.+|..++..+++.+++.+|.|++|.|+|+||+..+...
T Consensus 16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l-~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~----------- 83 (182)
T d1y1xa_ 16 DNQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI----------- 83 (182)
T ss_dssp TTSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-----------
T ss_pred cHHHHHHHHHHHcCCCcCCCCHHHHHHHH-HHhcccCchhhhhhhhccccccccccccccccccccccc-----------
Confidence 34689999999999999999999999999 558999999999999999999999999999998765321
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..+..+|+.+|.+++|+|+.+||+.++...| +++.+|+.+|.|+||.|+|+||+.++.
T Consensus 84 -~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~ 147 (182)
T d1y1xa_ 84 -LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI 147 (182)
T ss_dssp -HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred -cccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHH
Confidence 2466789999999999999999999998887 389999999999999999999999874
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.78 E-value=3.9e-19 Score=163.93 Aligned_cols=139 Identities=20% Similarity=0.268 Sum_probs=114.2
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+.++..++..|.+.|. +.+++|.|+.+||..++....+...+...++.+|+.+|.|++|.|+|.||+.++........
T Consensus 20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~ 97 (201)
T d1omra_ 20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT 97 (201)
T ss_dssp CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence 5688999999888884 55679999999999999775555666778899999999999999999999987765543322
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC--------------------cHHHHHHHhCCCCCCcccHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------------------SIDPLLEEADIDKDGRISLSEF 547 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------------------~~~~~~~~~D~d~dG~i~~~EF 547 (574)
. ..++.+|+.||.|++|+|+.+|+..++.... .++.+|+.+|.|+||.|+|+||
T Consensus 98 ~------~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF 171 (201)
T d1omra_ 98 N------QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF 171 (201)
T ss_dssp G------GSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred H------HHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHH
Confidence 1 2577899999999999999999987765321 1577999999999999999999
Q ss_pred HHHHHhc
Q 008197 548 RRLLRTA 554 (574)
Q Consensus 548 ~~~~~~~ 554 (574)
++.+...
T Consensus 172 ~~~~~~~ 178 (201)
T d1omra_ 172 IEGTLAN 178 (201)
T ss_dssp HHHHHHC
T ss_pred HHHHHHC
Confidence 9988653
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.78 E-value=2.9e-19 Score=163.08 Aligned_cols=138 Identities=25% Similarity=0.313 Sum_probs=113.1
Q ss_pred cchHHhhhhccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 410 LDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.+....++|+++|..|+.+ ++|+|+.+||..++ +..+...+...++.+|+.+|.|++|.|+|.||+..+........
T Consensus 15 ~~~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l-~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~- 92 (189)
T d1jbaa_ 15 VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL- 92 (189)
T ss_dssp CCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHH-HCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC-
T ss_pred cCccCHHHHHHHHHHhcccCCCCeeeHHHHHHHH-HHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch-
Confidence 3445556677777777655 59999999999999 55888888999999999999999999999999988876543222
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------------------cHHHHHHHhCCCCCCcccHH
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------------------SIDPLLEEADIDKDGRISLS 545 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------------------~~~~~~~~~D~d~dG~i~~~ 545 (574)
...++.+|+.||.|++|.|+.+|+..++.... .++.+|+.+|.|+||.|+|+
T Consensus 93 -----~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~ 167 (189)
T d1jbaa_ 93 -----EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLN 167 (189)
T ss_dssp -----THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHH
T ss_pred -----HHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHH
Confidence 13677899999999999999999988664321 16789999999999999999
Q ss_pred HHHHHHHhc
Q 008197 546 EFRRLLRTA 554 (574)
Q Consensus 546 EF~~~~~~~ 554 (574)
||+++|++.
T Consensus 168 EF~~~~~~~ 176 (189)
T d1jbaa_ 168 EFVEGARRD 176 (189)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHhC
Confidence 999999753
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=2.2e-20 Score=161.67 Aligned_cols=130 Identities=20% Similarity=0.311 Sum_probs=107.6
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcC--CCCcceehhchHHHHhhhhcccccchHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC--NTDGLVDFSEFVAATLHVHQLEEHDSEKWH 494 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~--d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~ 494 (574)
+++++|..||.|++|.|+.+||..+| +.+|..+++.++..++..++. +++|.|+|.||...+.......... ..
T Consensus 1 e~ke~F~~~D~d~~G~I~~~el~~~l-~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~---~~ 76 (139)
T d1w7jb1 1 EFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG---TY 76 (139)
T ss_dssp CHHHHHHHHCCSSSSEEESTTHHHHH-HHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----------
T ss_pred CHHHHHHHHhCCCCCeECHHHHHHHH-HHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcccc---HH
Confidence 47899999999999999999999999 459999999999999988774 5799999999998775433222111 12
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
..+..+|+.+|+|++|+|+.+||+.++...| +++.++. .|.|+||.|+|+||+++|
T Consensus 77 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 77 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFLKHI 138 (139)
T ss_dssp -CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT-TCCCTTSEEEHHHHHHHT
T ss_pred HHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHh-hCCCCCCeEeHHHHHHHh
Confidence 3477899999999999999999999998887 3777776 488999999999999986
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.77 E-value=3.4e-19 Score=161.43 Aligned_cols=139 Identities=22% Similarity=0.396 Sum_probs=115.1
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+.++.++++.+.+.|. +.+++|+|+..||..++....+.......++++|+.+|.+++|.|+|+||+..+........
T Consensus 16 t~fs~~ei~~l~~~F~--~~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~ 93 (181)
T d1bjfa_ 16 TDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL 93 (181)
T ss_dssp SSCCHHHHHHHHHHHH--HHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred cCCCHHHHHHHHHHHH--hhCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence 5689999999988885 45679999999999999554344445677899999999999999999999988776543221
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
...++.+|+.+|.|++|+|+.+|+..++.... .++.+|+.+|.|+||.|+|+||++
T Consensus 94 ------~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~ 167 (181)
T d1bjfa_ 94 ------EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 167 (181)
T ss_dssp ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHH
T ss_pred ------HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 24678899999999999999999998775321 278899999999999999999999
Q ss_pred HHHhc
Q 008197 550 LLRTA 554 (574)
Q Consensus 550 ~~~~~ 554 (574)
++.+.
T Consensus 168 ~~~~~ 172 (181)
T d1bjfa_ 168 GAKSD 172 (181)
T ss_dssp HHHHC
T ss_pred HHHhC
Confidence 99754
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=4.9e-19 Score=160.64 Aligned_cols=141 Identities=26% Similarity=0.397 Sum_probs=116.3
Q ss_pred ccccchHHhhhhccccccccCC--CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 407 ASTLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 407 ~~~~~~~~~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
.+.++.+++..|+++|..+|.+ ++|.|+.+||..++. ..+..+. ..++.+|+.+|.|++|.|+|+||+.++.....
T Consensus 8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~-~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~ 85 (183)
T d2zfda1 8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALF-KTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHP 85 (183)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHH-SCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHH-hcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhc
Confidence 4679999999999999999876 699999999999984 3555544 47899999999999999999999987754432
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc----C----------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------SIDPLLEEADIDKDGRISLSEFRRL 550 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~----~----------~~~~~~~~~D~d~dG~i~~~EF~~~ 550 (574)
... ...+++.+|+.||.|++|+|+.+|++.++... + .+..+|..+|.|+||.|+|+||..+
T Consensus 86 ~~~-----~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~ 160 (183)
T d2zfda1 86 NAP-----IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSL 160 (183)
T ss_dssp TSC-----HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHH
T ss_pred cCc-----HHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence 111 12367889999999999999999999876432 1 1677899999999999999999999
Q ss_pred HHhc
Q 008197 551 LRTA 554 (574)
Q Consensus 551 ~~~~ 554 (574)
+...
T Consensus 161 ~~~~ 164 (183)
T d2zfda1 161 VLRH 164 (183)
T ss_dssp HHHS
T ss_pred HHHC
Confidence 9764
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=2.9e-19 Score=161.61 Aligned_cols=127 Identities=28% Similarity=0.392 Sum_probs=111.2
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~-~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
.+.++|..+|..+|.|++|+|+.+||..+|.. ++. ..+.++++.+++.+|.|++|.|+|+||+.++...
T Consensus 16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~-~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~--------- 85 (181)
T d1hqva_ 16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI--------- 85 (181)
T ss_dssp SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCC-SSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH---------
T ss_pred ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH-cCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc---------
Confidence 44578999999999999999999999999954 554 4688999999999999999999999999876432
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
..++.+|+.+|++++|+|+.+||+.++...+ ++..+++.+|.+++|.|+|+||+.++.
T Consensus 86 ---~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~ 149 (181)
T d1hqva_ 86 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI 149 (181)
T ss_dssp ---HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHH
T ss_pred ---cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 2456799999999999999999999987766 388999999999999999999998874
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=6.1e-19 Score=160.92 Aligned_cols=138 Identities=21% Similarity=0.353 Sum_probs=114.2
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+.++..++.+|.+.|. +.+++|.|+..||..++....+.......++.+|+.+|.+++|.|+|.||+.++........
T Consensus 20 t~fs~~Ei~~l~~~F~--~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~ 97 (190)
T d1fpwa_ 20 TYFDRREIQQWHKGFL--RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL 97 (190)
T ss_dssp CCSTHHHHHHHHHHHH--HHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS
T ss_pred cCCCHHHHHHHHHHHH--HHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCch
Confidence 4588889998888885 45578999999999999765555555667899999999999999999999988765433221
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
..+++.+|+.||.|++|.|+.+|+..++.... .++.+|+.+|.|+||.|+|+||.+
T Consensus 98 ------~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~ 171 (190)
T d1fpwa_ 98 ------EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE 171 (190)
T ss_dssp ------THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred ------HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 23678899999999999999999998775331 278899999999999999999999
Q ss_pred HHHh
Q 008197 550 LLRT 553 (574)
Q Consensus 550 ~~~~ 553 (574)
++.+
T Consensus 172 ~~~~ 175 (190)
T d1fpwa_ 172 GSKV 175 (190)
T ss_dssp HHHS
T ss_pred HHHH
Confidence 9875
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=9.6e-19 Score=159.25 Aligned_cols=139 Identities=21% Similarity=0.325 Sum_probs=114.7
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+.++..++..|.+.|... +++|.|+..+|..++....+.......++.+|+.+|.+++|.|+|+||+..+........
T Consensus 17 t~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~ 94 (187)
T d1g8ia_ 17 TYFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL 94 (187)
T ss_dssp SSSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred cCCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCch
Confidence 357888888888888644 578999999999999765555556677889999999999999999999988776543221
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
..+++.+|+.||.|++|+|+.+||..++.... .++.+|+.+|.|+||.|+|+||++
T Consensus 95 ------~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~ 168 (187)
T d1g8ia_ 95 ------DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE 168 (187)
T ss_dssp ------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred ------hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 24688899999999999999999998775321 277899999999999999999999
Q ss_pred HHHhc
Q 008197 550 LLRTA 554 (574)
Q Consensus 550 ~~~~~ 554 (574)
++.+.
T Consensus 169 ~~~~~ 173 (187)
T d1g8ia_ 169 GSKAD 173 (187)
T ss_dssp HHHHC
T ss_pred HHHHC
Confidence 99864
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=99.75 E-value=3.8e-18 Score=155.58 Aligned_cols=164 Identities=17% Similarity=0.292 Sum_probs=123.4
Q ss_pred ccc-chHHhhhhccccccccCCCCCCcCHHHHHHHHH----hhCCCCccHHHHHHH-----HHhhcCCCCcceehhchHH
Q 008197 408 STL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEI-----LQAIDCNTDGLVDFSEFVA 477 (574)
Q Consensus 408 ~~~-~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~----~~~~~~~~~~~~~~~-----~~~~D~d~dg~I~f~EF~~ 477 (574)
+.+ +++.+++++++|..||.|++|+|+.+||..++. +.+|..++..++..+ +...+.+.++.|+++||+.
T Consensus 5 ~~f~~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~ 84 (189)
T d1qv0a_ 5 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLD 84 (189)
T ss_dssp CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHH
Confidence 344 567889999999999999999999999987653 346777776665443 3445677889999999998
Q ss_pred HHhhhhcc-----cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHH
Q 008197 478 ATLHVHQL-----EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSE 546 (574)
Q Consensus 478 ~~~~~~~~-----~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~E 546 (574)
.+...... ...........+..+|+.+|+|++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~E 164 (189)
T d1qv0a_ 85 GWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 164 (189)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHH
T ss_pred HHHHHHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence 77653221 1111122334677899999999999999999999998776 389999999999999999999
Q ss_pred HHHHHHhcccCCCCCCCCCCCCCCC
Q 008197 547 FRRLLRTASISSRNVPPSPSGHRNP 571 (574)
Q Consensus 547 F~~~~~~~~~~~~~~~~~~~~~~~~ 571 (574)
|++++.+.....++..+|-.+.+-|
T Consensus 165 F~~~~~~~~~~~d~~~~g~~~~~~~ 189 (189)
T d1qv0a_ 165 MTRQHLGFWYTLDPEADGLYGNGVP 189 (189)
T ss_dssp HHHHHHHHHTTCCGGGTTTTTTSCC
T ss_pred HHHHHHHhCCCCCCCCCCcCCCCCC
Confidence 9999999888877776775555544
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.74 E-value=3.3e-18 Score=154.33 Aligned_cols=138 Identities=25% Similarity=0.366 Sum_probs=112.1
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
+.++..+++.+.+.|. +.+++|.|+.+||..++....+.......++.+|..+|.|++|.|+|+||+.++........
T Consensus 8 t~ft~~ei~~l~~~F~--~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~ 85 (178)
T d1s6ca_ 8 TNFTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV 85 (178)
T ss_dssp SSCCHHHHHHHHHHHH--HHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence 5678888888877775 45678999999999999765555556677899999999999999999999988765433221
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------------------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 488 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 488 ~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------------------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
..+++.+|+.||.|++|.|+.+|+..++.... .++.+|+.+|.|+||.|||+||.+
T Consensus 86 ------~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~ 159 (178)
T d1s6ca_ 86 ------HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE 159 (178)
T ss_dssp ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred ------HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 24678899999999999999999987654321 167899999999999999999999
Q ss_pred HHHh
Q 008197 550 LLRT 553 (574)
Q Consensus 550 ~~~~ 553 (574)
++.+
T Consensus 160 ~i~~ 163 (178)
T d1s6ca_ 160 SCQE 163 (178)
T ss_dssp HTTS
T ss_pred HHHH
Confidence 8864
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.73 E-value=3.5e-18 Score=155.18 Aligned_cols=152 Identities=17% Similarity=0.208 Sum_probs=117.6
Q ss_pred cchHHhhhhcccccc-ccCCCCCCcCHHHHHHHHHhhC---CCCcc-----------HHHHHHHHHhhcCCCCcceehhc
Q 008197 410 LDDEELADLRDQFDA-IDVDKNGSISLEEMRQALAKDL---PWKLK-----------ESRVLEILQAIDCNTDGLVDFSE 474 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~-~D~d~~G~i~~~El~~~l~~~~---~~~~~-----------~~~~~~~~~~~D~d~dg~I~f~E 474 (574)
+++.+..+++++|+. +|.|+||.|+.+||..++.+.. ..... ......++...|.+++|.|++++
T Consensus 2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~ 81 (185)
T d2sasa_ 2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE 81 (185)
T ss_dssp CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence 567788999999997 5999999999999999885421 11111 12234567778999999999999
Q ss_pred hHHHHhhhhcccc---cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHH
Q 008197 475 FVAATLHVHQLEE---HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEF 547 (574)
Q Consensus 475 F~~~~~~~~~~~~---~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF 547 (574)
|+..+........ .........+..+|+.+|.|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~d~dG~i~~~EF 161 (185)
T d2sasa_ 82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY 161 (185)
T ss_dssp HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHHHHcCCCCCCCCcHHHH
Confidence 9988764332111 11122234678899999999999999999999998776 5999999999999999999999
Q ss_pred HHHHHhcccCCCCC
Q 008197 548 RRLLRTASISSRNV 561 (574)
Q Consensus 548 ~~~~~~~~~~~~~~ 561 (574)
+.++.......+..
T Consensus 162 ~~~~~~f~~~~~~d 175 (185)
T d2sasa_ 162 KELYYRLLTSPAAD 175 (185)
T ss_dssp HHHHHHHHHCSSCS
T ss_pred HHHHHHHhcCCCCC
Confidence 99998766555543
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.72 E-value=1.2e-18 Score=157.74 Aligned_cols=131 Identities=21% Similarity=0.369 Sum_probs=93.1
Q ss_pred ccchHHhh-hhccccccccCCCCCCcCHHHHHHHHHhhCCCC--------ccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 409 TLDDEELA-DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK--------LKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 409 ~~~~~~~~-~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~--------~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
.++++++. +++++|..+| +++|.|+..||+.+|.+ .+.. .+.+.++.++..+|.|++|.|+|+||..++
T Consensus 12 ~ls~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~ 89 (188)
T d1qxpa2 12 VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILW 89 (188)
T ss_dssp ---------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHH-hCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 45666654 5999999999 55899999999988743 3332 356789999999999999999999999876
Q ss_pred hhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 480 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
... ..++.+|+.||+|++|+|+..||+.++...| ++..++-..|.|++|.|+|+||+.+|..
T Consensus 90 ~~~------------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~~~~dg~i~f~eFi~~~~~ 156 (188)
T d1qxpa2 90 NRI------------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 156 (188)
T ss_dssp HHH------------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHHH
T ss_pred hhh------------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Confidence 432 2466799999999999999999999998877 2445555567899999999999998743
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.72 E-value=2.1e-18 Score=156.70 Aligned_cols=130 Identities=18% Similarity=0.306 Sum_probs=108.7
Q ss_pred cchHHh-hhhccccccccCCCCCCcCHHHHHHHHHhhCC--------CCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 410 LDDEEL-ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 410 ~~~~~~-~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~--------~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.+++++ +.++++|..+| |+||.|+..||..+|.. +| ...+.+.+..++..+|.|++|.|+|+||+..+.
T Consensus 11 ~~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~ 88 (186)
T d1df0a1 11 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRR-VLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT 88 (186)
T ss_dssp CCCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHH-HHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH-hcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHH
Confidence 344454 45899999999 99999999999999954 32 234678899999999999999999999987654
Q ss_pred hhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 481 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.. ..+..+|+.||+|++|+|+.+||+.++...| ++.+++..+|.|+||.|+|+||+.+|.+
T Consensus 89 ~~------------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~ 154 (186)
T d1df0a1 89 KI------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR 154 (186)
T ss_dssp HH------------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred hH------------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence 32 2466799999999999999999999998777 3667777899999999999999998754
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=99.71 E-value=1.1e-17 Score=150.20 Aligned_cols=146 Identities=18% Similarity=0.230 Sum_probs=111.3
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHhh---CCCCccH-H----HHHHHHHh--hcCCCCcceehhchHHHHhh
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKD---LPWKLKE-S----RVLEILQA--IDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~---~~~~~~~-~----~~~~~~~~--~D~d~dg~I~f~EF~~~~~~ 481 (574)
+-.+++|+++|..+|.|+||.|+.+||..++.+. .+..... . .....+.. .|.+++|.|+++||+..+..
T Consensus 2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~ 81 (174)
T d2scpa_ 2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE 81 (174)
T ss_dssp HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence 4567899999999999999999999999988552 1222221 1 12223333 26788999999999988765
Q ss_pred hhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHhcccC
Q 008197 482 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 557 (574)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~~ 557 (574)
...... ........+..+|+.+|+|++|+|+.+||+.++...+ ++..+|..+|.|+||.|+|+||+.++.....+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~~~ 160 (174)
T d2scpa_ 82 MVKNPE-AKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMN 160 (174)
T ss_dssp HTSCGG-GTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHHHC
T ss_pred hhcchh-hHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHhhc
Confidence 433221 2222344678899999999999999999999887665 59999999999999999999999999876555
Q ss_pred C
Q 008197 558 S 558 (574)
Q Consensus 558 ~ 558 (574)
.
T Consensus 161 ~ 161 (174)
T d2scpa_ 161 D 161 (174)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=9.1e-18 Score=148.44 Aligned_cols=119 Identities=19% Similarity=0.323 Sum_probs=99.8
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCCCCc-----cHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~-----~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
..+|+.+ .+.||.|+.+||+.+|.. +|.++ +.+.++.++..+|.|++|.|+|+||+.++...
T Consensus 3 ~~~F~~~-a~~dG~I~~~EL~~~L~~-~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~----------- 69 (165)
T d1k94a_ 3 YTYFSAV-AGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL----------- 69 (165)
T ss_dssp HHHHHHH-HGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-----------
T ss_pred HHHHHHh-cCCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc-----------
Confidence 4456666 588999999999999955 66554 56789999999999999999999999876432
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.||+|++|+|+.+||+.++...| +++.++..+|. ||.|+|+||+.+|.+
T Consensus 70 -~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~ 132 (165)
T d1k94a_ 70 -NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVK 132 (165)
T ss_dssp -HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred -chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence 2567799999999999999999999999887 38889999864 689999999987754
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.70 E-value=8.2e-18 Score=150.90 Aligned_cols=127 Identities=23% Similarity=0.332 Sum_probs=105.4
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC--------CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhc
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 484 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~--------~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~ 484 (574)
+++.+++++|..+|. .||.|+..||..+|.+ +|. ..+.+.+..++..+|.|++|.|+|+||+.++...
T Consensus 1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~-~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~-- 76 (173)
T d1alva_ 1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-- 76 (173)
T ss_dssp CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHH-HHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHH-hCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh--
Confidence 467899999999995 4899999999999955 332 2457889999999999999999999998765422
Q ss_pred ccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCc-----HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 485 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----IDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 485 ~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~-----~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..+..+|+.||+|++|.|+.+||+.++...|. ..+.|..+|.|++|.|+|+||+.+|..
T Consensus 77 ----------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~ 140 (173)
T d1alva_ 77 ----------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVR 140 (173)
T ss_dssp ----------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred ----------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHH
Confidence 24567999999999999999999999987772 445555677799999999999998854
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=99.70 E-value=7.9e-18 Score=166.78 Aligned_cols=144 Identities=21% Similarity=0.301 Sum_probs=117.4
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 487 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~ 487 (574)
..++.++...++++|..+|.|++|.|+.+||..+|.. +|..++..++..+|..+|.|++|.|+|.||+..+........
T Consensus 114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~ 192 (321)
T d1ij5a_ 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192 (321)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH-cCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhH
Confidence 3567788899999999999999999999999999955 888899999999999999999999999999754322110000
Q ss_pred ---------------------------cc--------------------------hHHHHHHHHHHHHhcCCCCCCcccH
Q 008197 488 ---------------------------HD--------------------------SEKWHLRSQAAFEKFDIDRDGFITP 514 (574)
Q Consensus 488 ---------------------------~~--------------------------~~~~~~~~~~~F~~~D~d~~G~I~~ 514 (574)
.. .......+..+|..+|.|++|+|+.
T Consensus 193 ~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~ 272 (321)
T d1ij5a_ 193 DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSK 272 (321)
T ss_dssp CHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEH
T ss_pred HHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcH
Confidence 00 0001233456899999999999999
Q ss_pred HHHHHhhcccC-------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 515 EELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 515 ~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
.||+.++...+ ++..+|..+|.|+||.|+|+||+++|.
T Consensus 273 ~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 273 EEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp HHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 99999886554 489999999999999999999999985
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=99.69 E-value=2.9e-17 Score=149.26 Aligned_cols=154 Identities=19% Similarity=0.246 Sum_probs=118.9
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHh----hCCCCccHHHHHHHHHh-----hcCCCCcceehhchHHHHhh
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQA-----IDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~----~~~~~~~~~~~~~~~~~-----~D~d~dg~I~f~EF~~~~~~ 481 (574)
++..+++++++|..+|.|+||+|+.+||..++.. .++..++..++...+.. .+...++.+++.+|+..+..
T Consensus 7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T d1uhka1 7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK 86 (187)
T ss_dssp CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence 3556889999999999999999999999876643 46777776655444433 34556778999999877654
Q ss_pred hhcccc-----cchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHH
Q 008197 482 VHQLEE-----HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 550 (574)
Q Consensus 482 ~~~~~~-----~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~ 550 (574)
...... .........+..+|+.+|+|++|+|+.+||+.++...| +++.+|+.+|.|+||.|+|+||+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~ 166 (187)
T d1uhka1 87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166 (187)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence 322110 11112334578899999999999999999999998766 3899999999999999999999999
Q ss_pred HHhcccCCCCCCCC
Q 008197 551 LRTASISSRNVPPS 564 (574)
Q Consensus 551 ~~~~~~~~~~~~~~ 564 (574)
+.+...+.++..++
T Consensus 167 ~~~~~~~~d~~~~~ 180 (187)
T d1uhka1 167 HLGFWYTMDPACEK 180 (187)
T ss_dssp HHHHHTTCCGGGTT
T ss_pred HHHhcccCCccccc
Confidence 99988877766544
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.68 E-value=9.6e-17 Score=144.07 Aligned_cols=148 Identities=16% Similarity=0.214 Sum_probs=115.8
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhh---CCCCccHHH-----------HHHHHHhhcCCCCcceehhchHHHH
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKD---LPWKLKESR-----------VLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~---~~~~~~~~~-----------~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
..++|+++|..+|.|++|.|+.+||..++.+. ++..+...+ ...++...|.+++|.|++.+++..+
T Consensus 5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 84 (176)
T d1nyaa_ 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT 84 (176)
T ss_dssp HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 34678999999999999999999999998542 343443222 2456677789999999999998876
Q ss_pred hhhhccccc--chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 480 LHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 480 ~~~~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
......... ........++.+|..||.|++|.|+.+||+.++...+ +++.+|..+|.|+||.|+|+||+.+|+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~ 164 (176)
T d1nyaa_ 85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 544322211 1122235688899999999999999999999887766 4899999999999999999999999998
Q ss_pred cccCCCCC
Q 008197 554 ASISSRNV 561 (574)
Q Consensus 554 ~~~~~~~~ 561 (574)
...+....
T Consensus 165 ~~~~~~d~ 172 (176)
T d1nyaa_ 165 FHFGRLDV 172 (176)
T ss_dssp CSSSCSSC
T ss_pred HhcCCCCc
Confidence 88776654
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.7e-17 Score=147.31 Aligned_cols=126 Identities=19% Similarity=0.353 Sum_probs=100.1
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCC-----ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 485 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~-----~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~ 485 (574)
+.++...+++.|..++ ++||.|+..||..+|.+ +|.. .+.+.++.+++.+|.|++|.|+|+||+.++...
T Consensus 2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~-~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~--- 76 (172)
T d1juoa_ 2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--- 76 (172)
T ss_dssp TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh---
Confidence 4556678999999997 88999999999999955 5654 357899999999999999999999999765422
Q ss_pred cccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 486 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 486 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
.....+|+.||.|++|.|+.+|++.++...+ ++..+++.+| .+|.|+|+||+.+|.
T Consensus 77 ---------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d--~~g~i~~~eF~~~~~ 138 (172)
T d1juoa_ 77 ---------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCV 138 (172)
T ss_dssp ---------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTC--SSSSEEHHHHHHHHH
T ss_pred ---------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHH--hcCCcCHHHHHHHHH
Confidence 2355689999999999999999999987766 2666666664 345666666666654
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1.1e-17 Score=150.77 Aligned_cols=137 Identities=25% Similarity=0.372 Sum_probs=106.4
Q ss_pred cccchHHhhhhccccccccCCCCCC--------cCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCC-CCcceehhchHHH
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGS--------ISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAA 478 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~--------i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d-~dg~I~f~EF~~~ 478 (574)
+.++++++..|++.|..+|++++|. ++.++|..... +..+ ..++++|+.+|.+ ++|.|+|+||+.+
T Consensus 9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~--l~~~---~~~~rif~~fd~~~~~g~I~f~EFv~~ 83 (180)
T d1xo5a_ 9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE--LKAN---PFKERICRVFSTSPAKDSLSFEDFLDL 83 (180)
T ss_dssp CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHH--HHTC---TTHHHHHHHHCCSTTCCEECHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcc--cccC---hHHHHHHHhccCCCCCCcCcHHHHHHH
Confidence 5789999999999999998888765 55666644321 1111 2467899999987 6999999999988
Q ss_pred HhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------c----HHHHHHHhCCCCCCccc
Q 008197 479 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------S----IDPLLEEADIDKDGRIS 543 (574)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~----~~~~~~~~D~d~dG~i~ 543 (574)
+........ ...+++.+|+.||.|++|+|+.+||..++..+- + ++.+|+.+|.|+||.||
T Consensus 84 l~~~~~~~~-----~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is 158 (180)
T d1xo5a_ 84 LSVFSDTAT-----PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN 158 (180)
T ss_dssp HHHHSTTSC-----HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBC
T ss_pred HHHHhhcCC-----HHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCc
Confidence 765432211 124788899999999999999999998776431 1 56689999999999999
Q ss_pred HHHHHHHHHhc
Q 008197 544 LSEFRRLLRTA 554 (574)
Q Consensus 544 ~~EF~~~~~~~ 554 (574)
|+||..++.+.
T Consensus 159 ~~EF~~~~~~~ 169 (180)
T d1xo5a_ 159 LSEFQHVISRS 169 (180)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999864
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.67 E-value=9.9e-17 Score=130.69 Aligned_cols=94 Identities=29% Similarity=0.449 Sum_probs=77.1
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc---C-
Q 008197 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G- 525 (574)
Q Consensus 450 ~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~- 525 (574)
++.++|.+++..+| ++|.|+|+||+.++.... .. ...++.+|+.||+|++|+|+.+||+.++..+ |
T Consensus 6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~~--~~------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~ 75 (109)
T d1pvaa_ 6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLKA--MS------ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR 75 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCTT--SC------HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC
T ss_pred CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHcc--CC------HHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC
Confidence 45678888888775 568899999998764321 11 1357789999999999999999999988755 2
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 526 -----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 526 -----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 76 ~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 76 DLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence 3889999999999999999999999975
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.64 E-value=2.1e-16 Score=128.70 Aligned_cols=94 Identities=28% Similarity=0.431 Sum_probs=76.8
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc---C-
Q 008197 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G- 525 (574)
Q Consensus 450 ~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~---~- 525 (574)
.+.++|.+++..+| .+|.|+|.||+..+... ... ...++.+|+.||+|++|+|+.+||+.++..+ |
T Consensus 6 l~~~di~~~~~~~~--~~G~idf~eF~~~~~~~----~~~----~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~ 75 (109)
T d5pala_ 6 LKADDINKAISAFK--DPGTFDYKRFFHLVGLK----GKT----DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75 (109)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT----TCC----HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred ccHHHHHHHHHhcC--CCCcCcHHHHHHHHHhc----CCC----HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccC
Confidence 45678888888876 46789999999766421 111 1368889999999999999999999887543 3
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 526 -----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 526 -----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
+++++|+.+|.|+||.|+|+||+.+|.+
T Consensus 76 ~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~ 108 (109)
T d5pala_ 76 DLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 3899999999999999999999999975
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.57 E-value=4.4e-15 Score=120.43 Aligned_cols=94 Identities=27% Similarity=0.385 Sum_probs=77.9
Q ss_pred CccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC---
Q 008197 449 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--- 525 (574)
Q Consensus 449 ~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--- 525 (574)
..++.++..++..++.+ |.|+|.||+..+... ... ..+++.+|+.||+|++|+|+.+||+.++..++
T Consensus 4 gls~~di~~~~~~~~~~--gsi~~~eF~~~~~l~----~~~----~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~ 73 (107)
T d2pvba_ 4 GLKDADVAAALAACSAA--DSFKHKEFFAKVGLA----SKS----LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA 73 (107)
T ss_dssp TSCHHHHHHHHHHTCST--TCCCHHHHHHHHTGG----GSC----HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTS
T ss_pred CCCHHHHHHHHHhccCC--CCcCHHHHHHHHhcc----cCC----HHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhccc
Confidence 35678899999998755 569999999866421 111 23688899999999999999999999887763
Q ss_pred ------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 526 ------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 526 ------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
++.++|+.+|.|+||.|+|+||+.+|+
T Consensus 74 ~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 74 RALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 389999999999999999999999986
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.55 E-value=4.9e-15 Score=120.84 Aligned_cols=94 Identities=22% Similarity=0.321 Sum_probs=77.2
Q ss_pred ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----
Q 008197 450 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 525 (574)
Q Consensus 450 ~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---- 525 (574)
.+.+++..++..++. +|.|+|+||+..+.... .. ...++.+|+.||+|++|+|+.+||+.++..++
T Consensus 6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~~----~~----~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~ 75 (109)
T d1rwya_ 6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLKK----KS----ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75 (109)
T ss_dssp SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGGG----SC----HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred cCHHHHHHHHHhccc--CCCcCHHHHHHHHcccc----CC----HHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccc
Confidence 457788888888754 57899999998764321 11 23677899999999999999999999886543
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 526 -----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 526 -----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
++..+|+.+|.|+||+|+|+||+.+|..
T Consensus 76 ~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~ 108 (109)
T d1rwya_ 76 DLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 3899999999999999999999999974
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=1.6e-14 Score=117.31 Aligned_cols=96 Identities=20% Similarity=0.303 Sum_probs=78.1
Q ss_pred CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-
Q 008197 447 PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 525 (574)
Q Consensus 447 ~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~- 525 (574)
+...+.++|..++..++ .+|.|+|.+|+..+... ... ...++.+|+.||+|++|+|+.+||+.++..++
T Consensus 3 ~d~ls~~dI~~~l~~~~--~~~s~~~~~F~~~~~~~----~~~----~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~ 72 (108)
T d1rroa_ 3 TDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS----KMS----ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS 72 (108)
T ss_dssp GGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG----GSC----HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT
T ss_pred hhhCCHHHHHHHHHhcc--cCCCccHHHHHHHHccC----cCC----HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHh
Confidence 44567888999988876 45679999998654321 111 23678899999999999999999999987653
Q ss_pred --------cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 526 --------SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 526 --------~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
++..+|+.+|.|+||.|+|+||+.+|+
T Consensus 73 ~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 73 DARELTESETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp TSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 389999999999999999999999986
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.47 E-value=1.8e-14 Score=110.54 Aligned_cols=69 Identities=28% Similarity=0.482 Sum_probs=63.5
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
+++++++++++|..||.|++|+|+..||..+|. .+| .++..++..+|+.+|.|++|.|+|+||+.++..
T Consensus 1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~-~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 1 TPQDIADRERIFKRFDTNGDGKISSSELGDALK-TLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHH-TTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH-Hhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 468899999999999999999999999999994 588 689999999999999999999999999987653
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.46 E-value=1.8e-14 Score=109.62 Aligned_cols=72 Identities=32% Similarity=0.553 Sum_probs=68.1
Q ss_pred cccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 408 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.+++++++++++++|..||.|++|+|+..||..+|. .+|..+++.++..+++.+|.|++|.|+|+||+.+|.
T Consensus 2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~ 73 (77)
T d1f54a_ 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR-SLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73 (77)
T ss_dssp CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHH-HHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 578999999999999999999999999999999995 589999999999999999999999999999998764
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.45 E-value=4.1e-14 Score=108.53 Aligned_cols=72 Identities=26% Similarity=0.498 Sum_probs=67.6
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.++++++++++++|..||.|++|+|+..||..+| +.+|..+++.++..+|+.+|.|++|.|+|+||+.+|..
T Consensus 7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHH-HHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 4689999999999999999999999999999999 45999999999999999999999999999999987753
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.45 E-value=3.8e-14 Score=108.67 Aligned_cols=74 Identities=24% Similarity=0.458 Sum_probs=68.6
Q ss_pred hccccchHHhhhhccccccccCCC-CCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 406 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 406 ~~~~~~~~~~~~l~~~F~~~D~d~-~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
....++++++++++++|..||+|+ +|+|+..||..+| +.+|..+++.+++.+++.+|.|++|.|+|+||+.+|.
T Consensus 5 ~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l-~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~ 79 (82)
T d1wrka1 5 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 79 (82)
T ss_dssp HHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHH-HHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred HHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 345689999999999999999995 7999999999999 5599999999999999999999999999999998875
|
| >d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), M-type [TaxId: 10116]
Probab=99.44 E-value=1.6e-13 Score=123.95 Aligned_cols=122 Identities=16% Similarity=0.128 Sum_probs=101.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+.+..++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+.+|+..++........ .
T Consensus 61 ~~~~~l~~~~D~d~~G~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~---~---- 126 (186)
T d1df0a1 61 ETCKIMVDMLDEDGSGKLGLKEFYILWTK-------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP---C---- 126 (186)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECC---H----
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHh-------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhccc---H----
Confidence 34677788999999999999999988743 357889999999999999999999988765432211 1
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 551 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~~ 551 (574)
.+..+|..+|.|++|.|+.+||..++..+..+..+|+.+|+|++|.| +|+||+.+.
T Consensus 127 ~~~~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~ef~~~~ 184 (186)
T d1df0a1 127 QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFS 184 (186)
T ss_dssp HHHHHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence 23457778899999999999999988877788999999999999987 899999875
|
| >d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Apoptosis-linked protein alg-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.44 E-value=2.5e-13 Score=121.94 Aligned_cols=123 Identities=15% Similarity=0.238 Sum_probs=102.5
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+.+..+|..+|.|++|.|+.+||..++.. ...+..+|+.+|.+++|.|+.+||..++........ ..
T Consensus 56 ~~~~~l~~~~D~d~~g~i~~~EFl~~~~~-------~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~------~e 122 (181)
T d1hqva_ 56 VTVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLS------DQ 122 (181)
T ss_dssp HHHHHHHHHHCCSSSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCC------HH
T ss_pred HHHHHHhhccccccccchhhhHHHhhhhh-------ccccccccccccccccchhhhHHHHHHHHHcCCcch------hH
Confidence 45667788899999999999999998843 356788999999999999999999988765422111 23
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL 551 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~~ 551 (574)
.+..+++.+|.+++|.|+.+||..++.....+.++|+.+|+++||.| +++||+.+|
T Consensus 123 ~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~~~D~~~dG~i~~~~~ef~~~~ 180 (181)
T d1hqva_ 123 FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180 (181)
T ss_dssp HHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence 56778999999999999999999888766678899999999999965 799999886
|
| >d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Grancalcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2.2e-13 Score=119.80 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=96.0
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+.++.++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+.+||..++.......+ ..
T Consensus 40 ~~~~~li~~~D~~~~G~i~~~EF~~l~~~-------~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~------~~ 106 (165)
T d1k94a_ 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLS------PQ 106 (165)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCC------HH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHhhc-------cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCC------HH
Confidence 34556677789999999999999888743 357888999999999999999999887765432111 12
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLR 552 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~~~ 552 (574)
.+..+|+.+|+ +|.|+.+||...+..+..+.+.|+.+|+|++|.| +++||+.++.
T Consensus 107 ~~~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~ 163 (165)
T d1k94a_ 107 TLTTIVKRYSK--NGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTM 163 (165)
T ss_dssp HHHHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred HHHHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 56678888875 5889999998877766667888999999999977 7899998875
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.43 E-value=1.8e-14 Score=112.04 Aligned_cols=75 Identities=33% Similarity=0.673 Sum_probs=69.2
Q ss_pred hhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
..|+..++++++.+++++|..||+|++|+|+..||..+|. .+|..+++.+++.+|+.+|.|++|.|+|+||+.+|
T Consensus 11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am 85 (87)
T d1s6ja_ 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 85 (87)
T ss_dssp HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH-TTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 3466788999999999999999999999999999999995 59999999999999999999999999999998654
|
| >d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain small (regulatory) subunit (domain VI) species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.43 E-value=2.4e-13 Score=121.24 Aligned_cols=123 Identities=17% Similarity=0.182 Sum_probs=100.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+..+.++..+|.|++|.|+.+||..++.. ...+..+|+.+|.|++|.|+..||..++.......+ +
T Consensus 47 ~~~~~l~~~~d~d~~g~i~~~ef~~~~~~-------~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~---~---- 112 (173)
T d1alva_ 47 DTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN---E---- 112 (173)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCC---H----
T ss_pred HHHHHHHHHhccCCCCcccchhhhhhhhh-------hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhH---H----
Confidence 34567788999999999999999988743 356788999999999999999999987765432111 1
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLR 552 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~~~ 552 (574)
.+..+|..+|.|++|.|+.+||..++.....+..+|+.+|.|+||.| +|+||+.+..
T Consensus 113 ~~~~~~~~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~~~D~d~~G~it~~~~efl~~~~ 171 (173)
T d1alva_ 113 HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTM 171 (173)
T ss_dssp HHHHHHHHHHTCSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEEHHHHHHHHH
T ss_pred HHHHHhhccccCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 23446777778999999999999988777778899999999999987 6899998764
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.43 E-value=4.1e-14 Score=106.31 Aligned_cols=70 Identities=24% Similarity=0.571 Sum_probs=66.4
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
++++++.+++++|..||.|++|+|+..||..++. .+|..++++++..+++.+|.|++|.|+|+||+.+|.
T Consensus 2 Ls~eei~el~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~ 71 (73)
T d2pq3a1 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 71 (73)
T ss_dssp CCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 6889999999999999999999999999999995 599999999999999999999999999999998764
|
| >d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Sorcin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=6.6e-13 Score=118.15 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=100.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
+.++.+|..+|.|++|.|+..||..++.. .......|+.+|.|++|.|+.+|+..++........ ..
T Consensus 47 ~~v~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls------~~ 113 (172)
T d1juoa_ 47 ETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLS------PQ 113 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCC------HH
T ss_pred HHHHHHHHHHCCCCCCceehHHHHHHHHh-------hhhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhh------HH
Confidence 44566788999999999999999988843 356778999999999999999999987754332111 12
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLR 552 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~~~ 552 (574)
.+..+|+.+|. +|.|+.+||..++.....+..+|+.+|+|+||.| +|+||+.++.
T Consensus 114 ~~~~l~~~~d~--~g~i~~~eF~~~~~~~~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l 170 (172)
T d1juoa_ 114 AVNSIAKRYST--NGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVM 170 (172)
T ss_dssp HHHHHHHHTCS--SSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEEHHHHHHHHT
T ss_pred HHHHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence 56778999964 5889999999988887788999999999999987 8899998875
|
| >d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Programmed cell death 6 protein-like protein species: Leishmania major [TaxId: 5664]
Probab=99.36 E-value=2.2e-12 Score=115.71 Aligned_cols=126 Identities=19% Similarity=0.204 Sum_probs=98.1
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++..+ +..+|..+|.|++|.|+..||...+.. ...+...|..+|.+++|.|+.+||..++.......
T Consensus 50 ~~s~~~---~~~l~~~~d~d~~~~i~~~ef~~~~~~-------~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~l-- 117 (182)
T d1y1xa_ 50 PFSLAT---TEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQV-- 117 (182)
T ss_dssp CCCHHH---HHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCC--
T ss_pred cCchhh---hhhhhcccccccccccccccccccccc-------ccccccchhccccccchhhhhHHHHHHHHHhCCch--
Confidence 445443 456677889999999999999887743 35678889999999999999999987765432111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHH
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL 550 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~ 550 (574)
. ...+..+|+.+|.|++|.|+.+||..++..+..+.++|+.+|.+++|.| +|+||+..
T Consensus 118 -s---~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l~~~~~~F~~~D~~~~G~is~~~~~f~~~ 177 (182)
T d1y1xa_ 118 -S---EQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGG 177 (182)
T ss_dssp -C---HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred -h---HHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence 1 1256778999999999999999999887766678889999999999995 68999864
|
| >d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.36 E-value=4.7e-13 Score=121.22 Aligned_cols=117 Identities=26% Similarity=0.371 Sum_probs=95.6
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc------ccchH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------EHDSE 491 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~------~~~~~ 491 (574)
...+|..+|.|++|.|+..||..++.. ++....++.++.+|+.+|.|++|.|+++||..++....... .....
T Consensus 65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~-~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~ 143 (190)
T d1fpwa_ 65 ANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA 143 (190)
T ss_dssp HHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCC
T ss_pred HHHHHHHhCcCCCCcccHHHHHHHHHH-HccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhh
Confidence 356899999999999999999999954 66777889999999999999999999999998876543211 11112
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhC
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 535 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 535 (574)
.....+..+|+.+|.|+||.|+.+||++++.....+-..|..+|
T Consensus 144 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~~~d 187 (190)
T d1fpwa_ 144 TPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD 187 (190)
T ss_dssp CHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHHHHHHhhhhc
Confidence 23456788999999999999999999999988877877777665
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=3.3e-13 Score=98.64 Aligned_cols=63 Identities=35% Similarity=0.604 Sum_probs=58.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
++|+++|..||+|++|+|+.+||+.++. .+|..+++.+++.+++.+|.|++|.|+|+||+.+|
T Consensus 3 eel~~aF~~fD~d~~G~I~~~el~~~l~-~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 3 EEIREAFRVFDKDGNGYISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 4689999999999999999999999995 59999999999999999999999999999998753
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.33 E-value=3.1e-13 Score=103.49 Aligned_cols=64 Identities=30% Similarity=0.482 Sum_probs=60.2
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
++|+++|..||.|++|+|+..||..+|. .+|..++..+++.+|+.+|.|+||.|+|+||+.++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~ 78 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 78 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHH-TSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHH-hcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 5789999999999999999999999995 599999999999999999999999999999998764
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=5.5e-14 Score=124.71 Aligned_cols=128 Identities=12% Similarity=0.109 Sum_probs=87.5
Q ss_pred hcccccc--ccCCCCCCcCHHHHHHHHHhhCCCC--ccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHH
Q 008197 418 LRDQFDA--IDVDKNGSISLEEMRQALAKDLPWK--LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 493 (574)
Q Consensus 418 l~~~F~~--~D~d~~G~i~~~El~~~l~~~~~~~--~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~ 493 (574)
|+++|.. +|.|++|.|+..||.+++ +..+.. .....+..++...|.+++|.|+|+||...+..... .
T Consensus 7 l~k~~~k~~~d~n~dG~Is~~el~k~l-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~---r----- 77 (170)
T d2zkmx1 7 LDKILVKLKMQLNSEGKIPVKNFFQMF-PADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP---R----- 77 (170)
T ss_dssp HHHHHHHHHHSCCTTSCEEHHHHHHHS-CSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC---C-----
T ss_pred HHHHHHHHhcccCCCCCCcHHHHHHHH-HHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCC---H-----
Confidence 3344444 799999999999999988 323222 23346667788889999999999999988754321 1
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC----------------cHHHHHHHhCCCCC----CcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADIDKD----GRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------~~~~~~~~~D~d~d----G~i~~~EF~~~~~~ 553 (574)
.++..+|+.||.|++|+||.+||+.++.... .+.+++..++.+.+ |.|++++|..+|..
T Consensus 78 -~ei~~~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S 156 (170)
T d2zkmx1 78 -PEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCG 156 (170)
T ss_dssp -HHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHS
T ss_pred -HHHHHHHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcC
Confidence 2466799999999999999999999886432 37888998887654 88999999999974
Q ss_pred cc
Q 008197 554 AS 555 (574)
Q Consensus 554 ~~ 555 (574)
..
T Consensus 157 ~e 158 (170)
T d2zkmx1 157 PE 158 (170)
T ss_dssp TT
T ss_pred cc
Confidence 43
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.33 E-value=5.1e-13 Score=100.58 Aligned_cols=65 Identities=26% Similarity=0.440 Sum_probs=60.7
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
++|+++|..||.|++|+|+..||..+|. .+|..++.++++.+++.+|.|++|.|+|+||+.+|..
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~-~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~ 73 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 73 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHH-HSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHH-hcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 4789999999999999999999999995 5999999999999999999999999999999987753
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.31 E-value=6.2e-13 Score=97.91 Aligned_cols=58 Identities=31% Similarity=0.536 Sum_probs=54.1
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC-------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
.++.+|+.||+|++|+|+.+||+.++..+| +++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 3 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r 67 (68)
T d1c7va_ 3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 67 (68)
T ss_dssp HHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 577899999999999999999999998886 3899999999999999999999999975
|
| >d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Penta-EF-hand proteins domain: Calpain large subunit, C-terminal domain (domain IV) species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]
Probab=99.31 E-value=1.7e-12 Score=116.70 Aligned_cols=120 Identities=18% Similarity=0.181 Sum_probs=83.9
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
.++.++..+|.|++|.|+..||..++.. ...+..+|+.+|.|++|.|+..||..++.......+ . ..
T Consensus 64 ~~~~li~~~D~d~~G~i~~~EF~~l~~~-------~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~---~---~~ 130 (188)
T d1qxpa2 64 SCRSMVNLMDRDGNGKLGLVEFNILWNR-------IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP---C---QL 130 (188)
T ss_dssp HHHHHHHHHCC--CCCCCSSSHHHHHHH-------HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECC---H---HH
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHhh-------hHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCC---H---HH
Confidence 4566677788888888888888877643 256778888888888888888888877654322111 1 12
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcc--cHHHHHHH
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL 550 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i--~~~EF~~~ 550 (574)
+..++..+ .|++|.|+.+||..++..+..+.++|+.+|++++|.| +++||+.+
T Consensus 131 ~~~l~~~~-~~~dg~i~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~efl~~ 185 (188)
T d1qxpa2 131 HQVIVARF-ADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSF 185 (188)
T ss_dssp HHHHHHHT-SCSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred HHHHHHHh-cCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence 33445554 5888888888888777666667778888888888865 78888765
|
| >d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.30 E-value=1.3e-12 Score=98.20 Aligned_cols=60 Identities=33% Similarity=0.578 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.+++.+|+.||+|++|+|+.+||+.++..+| ++..+|+.+|.|+||.|+|+||+.+|...
T Consensus 9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~ 74 (75)
T d1jc2a_ 9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV 74 (75)
T ss_dssp HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence 4688899999999999999999999999888 49999999999999999999999999753
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.30 E-value=8.1e-13 Score=97.19 Aligned_cols=63 Identities=21% Similarity=0.451 Sum_probs=58.8
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.++++|..||.|++|+|+..||..++. .+|..+++++++.+|+.+|.|+||.|+|+||+.++.
T Consensus 2 ~~r~~F~~~D~d~~G~I~~~El~~~l~-~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~ 64 (67)
T d1tiza_ 2 SAKRVFEKFDKNKDGKLSLDEFREVAL-AFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHH-HTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred hHHHHHHHHCCCCcCcCcHHHHHHHHH-HhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 467899999999999999999999994 599999999999999999999999999999998764
|
| >d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]
Probab=99.29 E-value=1.7e-12 Score=99.31 Aligned_cols=60 Identities=32% Similarity=0.598 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
..++.+|+.||+|++|+|+.+||+.++..+| +++.+|..+|.|+||+|+|+||+.+|++.
T Consensus 15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~ 80 (81)
T d1fi5a_ 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV 80 (81)
T ss_dssp HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence 4688899999999999999999999999887 49999999999999999999999999753
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.29 E-value=8.4e-13 Score=94.99 Aligned_cols=61 Identities=26% Similarity=0.585 Sum_probs=57.4
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 477 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~ 477 (574)
++|+++|..||++++|+|+..||..+|. .+|..+++.++..+|+.+|.|++|.|+|+||+.
T Consensus 1 Eel~~aF~~fD~~~~G~I~~~el~~~l~-~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 1 EDFVKAFQVFDKESTGKVSVGDLRYMLT-GLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHHCTTCCSCEEHHHHHHHHH-HTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred ChHHHHHHHHCCCCCCeEeHHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 4688999999999999999999999995 599999999999999999999999999999973
|
| >d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.29 E-value=1.2e-12 Score=95.66 Aligned_cols=56 Identities=38% Similarity=0.682 Sum_probs=52.6
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
.++.+|+.||+|++|+|+.+||+.++..+| ++..+++.+|.|+||.|+|+||+++|
T Consensus 4 el~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m 65 (65)
T d1fw4a_ 4 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65 (65)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence 678899999999999999999999999888 48999999999999999999999875
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.29 E-value=1.5e-12 Score=98.73 Aligned_cols=63 Identities=32% Similarity=0.469 Sum_probs=57.3
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
...++++|+.||+|++|+|+.+||+.++..++ ++..+|+.+|.|+||.|+|+||+.+|.+.++
T Consensus 8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~~ 76 (77)
T d1oqpa_ 8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 76 (77)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccCC
Confidence 34788999999999999999999999998877 4899999999999999999999999987653
|
| >d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=99.27 E-value=7e-13 Score=97.64 Aligned_cols=64 Identities=20% Similarity=0.452 Sum_probs=58.5
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~-~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
++|+++|..||.|++|+|+.+||..+| +.+|.. .++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus 2 eel~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 66 (68)
T d1c7va_ 2 EEILRAFKVFDANGDGVIDFDEFKFIM-QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK 66 (68)
T ss_dssp HHHHHHHHHHSCSGGGEECHHHHHHHS-STTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCeEcHHHHHHHH-HHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 468899999999999999999999999 558875 6999999999999999999999999998764
|
| >d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Caltractin (centrin 2) species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.26 E-value=1.5e-12 Score=98.79 Aligned_cols=67 Identities=24% Similarity=0.426 Sum_probs=61.6
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..++|+++|..||.|++|+|+..||..+|. .+|..++..++..+|+.+|.|++|.|+|+||+.+|..
T Consensus 7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k 73 (77)
T d1oqpa_ 7 SREEILKAFRLFDDDNSGTITIKDLRRVAK-ELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73 (77)
T ss_dssp HHHHHHHHHHHHCTTCSSSEEHHHHHHHHH-HHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEechHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence 346789999999999999999999999995 5899999999999999999999999999999987753
|
| >d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin-related protein T21P5.17 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.25 E-value=2.8e-12 Score=94.25 Aligned_cols=57 Identities=30% Similarity=0.518 Sum_probs=53.4
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
++++|+.||+|++|+|+.+||+.++..+| ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~ 65 (67)
T d1tiza_ 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 56799999999999999999999998887 4999999999999999999999999975
|
| >d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.25 E-value=4.6e-12 Score=96.79 Aligned_cols=60 Identities=33% Similarity=0.512 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.||+|++|+|+.+||+.++..+| ++..+|..+|.|+||.|+|+||+.+|.+
T Consensus 13 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~ 78 (81)
T d1avsa_ 13 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 78 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 34688899999999999999999999999887 4999999999999999999999999975
|
| >d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Polcalcin domain: Polcalcin Che a 3 species: Pigweed (Chenopodium album) [TaxId: 3559]
Probab=99.24 E-value=5.6e-12 Score=96.32 Aligned_cols=60 Identities=32% Similarity=0.493 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++++|+.||+|++|+|+.+||+.++..+| ++.++|+.+|.|+||.|+|+||+.+|..
T Consensus 5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~ 69 (81)
T d2opoa1 5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 69 (81)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 35788999999999999999999999998887 4899999999999999999999999875
|
| >d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.22 E-value=3.9e-12 Score=91.42 Aligned_cols=54 Identities=28% Similarity=0.470 Sum_probs=50.5
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHH
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRR 549 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~ 549 (574)
+++++|+.||++++|+|+.+||+.++...| ++..+|+.+|.|+||.|+|+||++
T Consensus 2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~ 61 (61)
T d2fcea1 2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 61 (61)
T ss_dssp HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence 567899999999999999999999999887 499999999999999999999985
|
| >d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Guanylate cyclase activating protein 2, GCAP-2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.22 E-value=8.8e-12 Score=112.54 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=91.6
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc-------
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------- 488 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~------- 488 (574)
..+..+|..+|.|++|.|+..||..++.. +.....++.++.+|+.+|.|++|.|++.||..++.........
T Consensus 58 ~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~-~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~ 136 (189)
T d1jbaa_ 58 QYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA 136 (189)
T ss_dssp HHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTS
T ss_pred HHHHHHHHHhccCCCCeEeehhHHHHHHh-hcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchh
Confidence 35678899999999999999999999965 4556677899999999999999999999998876543211000
Q ss_pred ----chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHH
Q 008197 489 ----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 532 (574)
Q Consensus 489 ----~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 532 (574)
........+..+|+.+|+|+||.|+.+||..++.....+..+|.
T Consensus 137 ~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~ 184 (189)
T d1jbaa_ 137 EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQ 184 (189)
T ss_dssp STTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHH
T ss_pred hhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhc
Confidence 00011235678999999999999999999999988877777665
|
| >d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Rattus norvegicus [TaxId: 10116]
Probab=99.21 E-value=6.8e-12 Score=93.83 Aligned_cols=60 Identities=32% Similarity=0.488 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.||+|++|+|+.+||+.++...| ++..+++.+|.|++|.|+|+||+.+|.+
T Consensus 7 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~ 72 (73)
T d2pq3a1 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 72 (73)
T ss_dssp HHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 35788899999999999999999999998887 3899999999999999999999999864
|
| >d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.21 E-value=6.9e-12 Score=94.97 Aligned_cols=60 Identities=32% Similarity=0.481 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++++|+.||.|++|+|+.+||+.++...| ++.+++..+|.|++|.|+|+||+.+|.+
T Consensus 9 i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~ 74 (77)
T d1f54a_ 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSR 74 (77)
T ss_dssp HHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 34688899999999999999999999998887 4999999999999999999999999864
|
| >d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium- and integrin-binding protein, CIB species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=1.5e-11 Score=109.86 Aligned_cols=115 Identities=14% Similarity=0.139 Sum_probs=88.7
Q ss_pred hccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc---cccchHHH
Q 008197 418 LRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKW 493 (574)
Q Consensus 418 l~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~---~~~~~~~~ 493 (574)
..++|+.||.| ++|.|+..||..++.........++.++.+|+.+|.|++|.|+.+|+..++...... ......+.
T Consensus 59 ~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~ 138 (180)
T d1xo5a_ 59 KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 138 (180)
T ss_dssp HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTH
T ss_pred HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHH
Confidence 35689999987 699999999999996544566667899999999999999999999999876643211 11112233
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHH
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE 532 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~ 532 (574)
...+..+|+.+|.|++|.|+.+||.+++....++-+.|.
T Consensus 139 ~~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P~~~~~f~ 177 (180)
T d1xo5a_ 139 KQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFK 177 (180)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCHHHHhhCe
Confidence 445778999999999999999999998876655555443
|
| >d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=99.20 E-value=1.3e-11 Score=94.25 Aligned_cols=60 Identities=27% Similarity=0.465 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcCCCC-CCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDR-DGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~-~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...++.+|+.||+|+ +|.|+..||+.++..+| ++.++++.+|.|+||.|+|+||+.+|.+
T Consensus 14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~ 80 (82)
T d1wrka1 14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVR 80 (82)
T ss_dssp HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence 457888999999996 79999999999999888 4999999999999999999999999975
|
| >d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Frequenin (neuronal calcium sensor 1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.19 E-value=4.5e-12 Score=114.29 Aligned_cols=116 Identities=22% Similarity=0.255 Sum_probs=90.4
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcc------cccchHH
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------EEHDSEK 492 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~------~~~~~~~ 492 (574)
..+|..+|.+++|.|+..||..++.. +.....++.++.+|+.+|.|++|.|+.+|+..++...... .......
T Consensus 63 ~~if~~~d~~~dg~I~~~EF~~~l~~-~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~ 141 (187)
T d1g8ia_ 63 TFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT 141 (187)
T ss_dssp HHHHHHHCTTCSSEEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred HHHHHHhCcCCCCCCcHHHHHHHHHH-hccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence 45799999999999999999999854 4444567789999999999999999999998876543211 0111112
Q ss_pred HHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhC
Q 008197 493 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD 535 (574)
Q Consensus 493 ~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D 535 (574)
....+..+|+.+|.|+||.|+.+||.+++.....+-++|..+|
T Consensus 142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~~~~~l~~~~ 184 (187)
T d1g8ia_ 142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYD 184 (187)
T ss_dssp HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCCBT
T ss_pred HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHHHHhh
Confidence 2346788999999999999999999998887766666665554
|
| >d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=99.17 E-value=1.3e-12 Score=101.40 Aligned_cols=79 Identities=30% Similarity=0.396 Sum_probs=63.4
Q ss_pred CCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCC
Q 008197 465 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDK 538 (574)
Q Consensus 465 d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~ 538 (574)
+++|.|+.++.. +. ..+.... ...++.+|+.||+|++|+|+.+||+.++..+| ++..+|+.+|.|+
T Consensus 1 ~~~g~id~~~~~--ma--~~l~~~~----i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~ 72 (87)
T d1s6ja_ 1 HSSGHIDDDDKH--MA--ERLSEEE----IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72 (87)
T ss_dssp CCSSSSSSHHHH--SS--SSSCSSS----TTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred CCCCccCchHHH--HH--hhCCHHH----HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCC
Confidence 367889998864 22 1222211 12467799999999999999999999999887 4999999999999
Q ss_pred CCcccHHHHHHHH
Q 008197 539 DGRISLSEFRRLL 551 (574)
Q Consensus 539 dG~i~~~EF~~~~ 551 (574)
+|.|+|+||+.+|
T Consensus 73 ~g~I~~~EFl~am 85 (87)
T d1s6ja_ 73 SGTIDYGEFIAAT 85 (87)
T ss_dssp SSEECHHHHTTCC
T ss_pred CCeEeHHHHHHHH
Confidence 9999999998755
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.15 E-value=1.6e-11 Score=92.60 Aligned_cols=60 Identities=30% Similarity=0.511 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCC--CCCcccHHHHHHhhcccC--------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 495 LRSQAAFEKFDID--RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 495 ~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
++++.+|+.||.+ ++|+|+.+||+.++..+| ++..+|+.+|.|+||.|+|+||+.+|.+.
T Consensus 5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~ 74 (76)
T d1qx2a_ 5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence 3688899999654 579999999999987654 48999999999999999999999999764
|
| >d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.15 E-value=6.4e-11 Score=95.68 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=67.9
Q ss_pred CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCC
Q 008197 428 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 507 (574)
Q Consensus 428 d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 507 (574)
+++|.|+..||...+. + ...+...++.+|+.+|.|++|.|+.+|+..++........... ...+..+|+.+|.|
T Consensus 19 d~dG~idf~EF~~~~~--~-~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls---~~ev~~~~~~~D~d 92 (109)
T d1pvaa_ 19 KAEGSFNHKKFFALVG--L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT---DAETKAFLKAADKD 92 (109)
T ss_dssp CSTTCCCHHHHHHHHT--C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC---HHHHHHHHHHHCTT
T ss_pred CCCCCCcHHHHHHHHH--H-ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCC---HHHHHHHHHHHCCC
Confidence 4678899999988772 1 2345778999999999999999999999866644321111111 13567799999999
Q ss_pred CCCcccHHHHHHhhcc
Q 008197 508 RDGFITPEELRMHTGL 523 (574)
Q Consensus 508 ~~G~I~~~El~~~l~~ 523 (574)
+||.|+.+||..++..
T Consensus 93 ~dG~I~~~EF~~~m~~ 108 (109)
T d1pvaa_ 93 GDGKIGIDEFETLVHE 108 (109)
T ss_dssp CSSSBCHHHHHHHHHC
T ss_pred CcCcEeHHHHHHHHHh
Confidence 9999999999987753
|
| >d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin B-like protein 2 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.14 E-value=3.6e-11 Score=107.77 Aligned_cols=108 Identities=21% Similarity=0.218 Sum_probs=84.8
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc--ccchHHHHH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE--EHDSEKWHL 495 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~--~~~~~~~~~ 495 (574)
...+|..+|.|++|.|+..||..++.........++.++.+|+.+|.|++|.|+.+|+..++....... .........
T Consensus 56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (183)
T d2zfda1 56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED 135 (183)
T ss_dssp HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence 467899999999999999999999855333445677899999999999999999999998765432111 112223345
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
.+..+|+.+|.|++|.|+.+||..++....
T Consensus 136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~~p 165 (183)
T d2zfda1 136 IIDKTFEEADTKHDGKIDKEEWRSLVLRHP 165 (183)
T ss_dssp HHHHHHHHHCSSCSSEECHHHHHHHHHHSG
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHCH
Confidence 577899999999999999999998876543
|
| >d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: EHCABP species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Probab=99.14 E-value=8.6e-11 Score=99.33 Aligned_cols=94 Identities=23% Similarity=0.370 Sum_probs=77.6
Q ss_pred HHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC---------
Q 008197 455 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------- 525 (574)
Q Consensus 455 ~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------- 525 (574)
++.+|+.+|.|+||.|+++||..++....... . ...+..+|+.+|.+++|.|+.+||..++....
T Consensus 2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~---~---~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~ 75 (134)
T d1jfja_ 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIK---N---EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSS---H---HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCC---C---HHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 47899999999999999999988775442211 1 23577799999999999999999999886443
Q ss_pred cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 526 SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 526 ~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
.+..+|+.+|.|++|.|+.+||..++...
T Consensus 76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~ 104 (134)
T d1jfja_ 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH 104 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred cccccccccccccCCcccHHHHHHHHHhc
Confidence 26789999999999999999999998643
|
| >d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Kchip1, Kv4 potassium channel-interacting protein species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.13 E-value=2.2e-11 Score=108.71 Aligned_cols=115 Identities=20% Similarity=0.277 Sum_probs=87.6
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc------chH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------DSE 491 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~------~~~ 491 (574)
+..+|..+|.|++|.|+.+||..++.. +......+.+..+|+.+|.|++|.|+++|+...+......... ...
T Consensus 53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~-~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~ 131 (178)
T d1s6ca_ 53 AHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED 131 (178)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC----------
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHH-HhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHH
Confidence 356899999999999999999998844 4445567889999999999999999999998766543221110 011
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHH
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 533 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~ 533 (574)
.....+..+|+.+|.|+||.||.+||.+++....++-+++..
T Consensus 132 ~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~~~~~~l~~ 173 (178)
T d1s6ca_ 132 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 173 (178)
T ss_dssp -CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHhhh
Confidence 112356789999999999999999999998877766555543
|
| >d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Recoverin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.13 E-value=1.9e-11 Score=111.46 Aligned_cols=110 Identities=15% Similarity=0.191 Sum_probs=85.1
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc--------
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-------- 488 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~-------- 488 (574)
.+..+|..+|.|++|.|+..||..++.. +.....++.++.+|+.+|.|++|.|+++||...+.........
T Consensus 64 ~~~~if~~~D~~~~G~I~f~EF~~~~~~-~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~ 142 (201)
T d1omra_ 64 YAQHVFRSFDANSDGTLDFKEYVIALHM-TSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPE 142 (201)
T ss_dssp HHHHHHHTTTSCSSSEEEHHHHHHHHHH-HHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCG
T ss_pred HHHHHHHHhccCCCCeEeehhHHHHHHh-hcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhh
Confidence 3467899999999999999999999855 4555667789999999999999999999998877543322110
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcH
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSI 527 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~ 527 (574)
........+..+|+.+|+|+||.|+.+||.+.+.....+
T Consensus 143 ~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~~~~ 181 (201)
T d1omra_ 143 DENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLANKEI 181 (201)
T ss_dssp GGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHCHHH
T ss_pred hhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHCHHH
Confidence 111123456789999999999999999999877654333
|
| >d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Leopard shark (Triakis semifasciata) [TaxId: 30493]
Probab=99.11 E-value=1.5e-10 Score=93.53 Aligned_cols=102 Identities=16% Similarity=0.266 Sum_probs=69.3
Q ss_pred cchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccc
Q 008197 410 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 489 (574)
Q Consensus 410 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~ 489 (574)
++.+++ .+++..+| .+|.|+..||...+. + ...+++++..+|+.+|.|++|.|+.+|+..++.........-
T Consensus 6 l~~~di---~~~~~~~~--~~G~idf~eF~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~ 77 (109)
T d5pala_ 6 LKADDI---NKAISAFK--DPGTFDYKRFFHLVG--L-KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL 77 (109)
T ss_dssp SCHHHH---HHHHHHTC--STTCCCHHHHHHHHT--C-TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred ccHHHH---HHHHHhcC--CCCcCcHHHHHHHHH--h-cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcC
Confidence 344444 34444444 458899999987662 2 234567889999999999999999999877664332111111
Q ss_pred hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 490 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 490 ~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
. ...+..+|+.+|.|+||.|+.+||..++.
T Consensus 78 ~---~~e~~~~~~~~D~d~dG~I~~~EF~~~m~ 107 (109)
T d5pala_ 78 N---DTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred C---HHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence 1 12567788999999999999999987764
|
| >d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Neurocalcin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.07 E-value=7.4e-11 Score=105.51 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=86.3
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccc------cchH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDSE 491 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~------~~~~ 491 (574)
..++|..+|.+++|.|+.+||..++.. +.....++.+..+|+.+|.|++|.|+.+||..++........ ....
T Consensus 61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~-~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~ 139 (181)
T d1bjfa_ 61 AEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 139 (181)
T ss_dssp HHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGS
T ss_pred HHHHHHhcCCCCCCcEeHHHHHHHHHH-HhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccc
Confidence 467899999999999999999999855 444556778999999999999999999999988765432111 1111
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHH
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSID 528 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~ 528 (574)
.....+..+|+.+|.|+||.|+.+||.+++....++-
T Consensus 140 ~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~~~ 176 (181)
T d1bjfa_ 140 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIV 176 (181)
T ss_dssp SHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHH
T ss_pred cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHH
Confidence 1234677899999999999999999999887655433
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=4.8e-11 Score=93.98 Aligned_cols=70 Identities=23% Similarity=0.219 Sum_probs=62.6
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.+++++.++++++|+.+|+|++|+|+.+|+..++.+ .+ .+..++..+++.+|.|+||.|+|+||+.+|..
T Consensus 3 ~lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 3 VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp SSCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-cC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 367889999999999999999999999999999955 44 56789999999999999999999999977643
|
| >d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Rat (Rattus rattus) [TaxId: 10117]
Probab=99.06 E-value=1.7e-10 Score=93.35 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=70.2
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhccccc
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 488 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~ 488 (574)
.++.+++..+. ..++ .+|.|+..||...+.. ...+...++.+|+.+|.|++|.|+++||..++.........
T Consensus 5 ~~~~~~i~~~~---~~~~--~~~~i~f~eF~~~~~~---~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~ 76 (109)
T d1rwya_ 5 LLSAEDIKKAI---GAFT--AADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD 76 (109)
T ss_dssp HSCHHHHHHHH---HTTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred hcCHHHHHHHH---Hhcc--cCCCcCHHHHHHHHcc---ccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhcccccc
Confidence 34555544444 3333 3578999999887732 12356788889999999999999999998777543221111
Q ss_pred chHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 489 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 489 ~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.. ...+..+|+.+|.|+||.|+.+||..++.
T Consensus 77 ~~---~~e~~~~~~~~D~d~dG~i~~~EF~~~m~ 107 (109)
T d1rwya_ 77 LS---AKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp CC---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CC---HHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 11 12466789999999999999999988765
|
| >d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Parvalbumin species: Pike (Esox lucius) [TaxId: 8010]
Probab=99.05 E-value=5.1e-11 Score=95.99 Aligned_cols=66 Identities=29% Similarity=0.448 Sum_probs=58.5
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhC---CCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~---~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
..++++++|+.||.|++|+|+..||..++.. + +...++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus 38 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~ 106 (107)
T d2pvba_ 38 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQN-FSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106 (107)
T ss_dssp CHHHHHHHHHHHCTTCSSSBCHHHHHTGGGG-TCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHhhccCCCCcCcHHHHHHHHHH-hhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 3457899999999999999999999999854 5 4567899999999999999999999999997764
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=5.7e-11 Score=91.25 Aligned_cols=65 Identities=18% Similarity=0.347 Sum_probs=59.8
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
....+.++|..+|.+++|+|+.+||..+|.. ++..++++++..+|..+|.|++|.|+|.||+..+
T Consensus 18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~-~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 18 HYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCceEChhHHHHHHHH-hCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 3467889999999999999999999999964 8999999999999999999999999999999654
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.04 E-value=1.1e-10 Score=91.30 Aligned_cols=70 Identities=27% Similarity=0.324 Sum_probs=62.7
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.+++++.++++++|+.+|+|++|+|+.+|+..++.+ .+ .+..++..|++.+|.|++|.|+|+||+.++..
T Consensus 2 ~ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHH-cc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 468899999999999999999999999999999966 44 56789999999999999999999999876543
|
| >d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcineurin regulatory subunit (B-chain) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=2.9e-10 Score=99.88 Aligned_cols=106 Identities=19% Similarity=0.197 Sum_probs=84.2
Q ss_pred hccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHH
Q 008197 418 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 497 (574)
Q Consensus 418 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~ 497 (574)
+.++|..+|.+++|.|+.+||..++............+..+|+.+|.|++|.|+.+|+...+...... ..........+
T Consensus 50 ~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~-~~~~~~~~~~~ 128 (165)
T d1auib_ 50 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIV 128 (165)
T ss_dssp HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTT-SSCHHHHHHHH
T ss_pred HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccc-cCchHHHHHHH
Confidence 34578899999999999999999996544455566789999999999999999999999877543221 11222334567
Q ss_pred HHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 498 QAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 498 ~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
..+|..+|.|++|.|+.+||.+++...
T Consensus 129 ~~~~~~~D~~~dG~Is~~EF~~i~~~~ 155 (165)
T d1auib_ 129 DKTIINADKDGDGRISFEEFCAVVGGL 155 (165)
T ss_dssp HHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred HHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence 789999999999999999999888644
|
| >d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.01 E-value=3.9e-11 Score=90.38 Aligned_cols=66 Identities=26% Similarity=0.405 Sum_probs=55.2
Q ss_pred hhhhccccccccCC--CCCCcCHHHHHHHHHhhCCCCcc--HHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 415 LADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 415 ~~~l~~~F~~~D~d--~~G~i~~~El~~~l~~~~~~~~~--~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.++|+++|+.||.+ ++|+|+.+||..+|.. +|..++ ..+++.+++.+|.|+||.|+|+||+.+|..
T Consensus 4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~-lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~ 73 (76)
T d1qx2a_ 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQT-LGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHH-HGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHH-hCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence 35788999999764 4799999999999955 676654 457999999999999999999999987653
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=1.1e-10 Score=92.78 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=50.4
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhcccC----------------------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------------------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~~~~----------------------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
++.+|+.+|.||||+|+.+||+.++...+ .+..+|..+|.|+||.|||+||+.++++.
T Consensus 18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~ 97 (99)
T d1snla_ 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK 97 (99)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence 45699999999999999999998885421 16779999999999999999999998864
|
| >d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Parvalbumin domain: Oncomodulin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.98 E-value=7.2e-10 Score=89.29 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=55.0
Q ss_pred CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCC
Q 008197 428 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 507 (574)
Q Consensus 428 d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 507 (574)
+.+|.++..+|...+ . + ...+.++++.+|+.+|.|++|.|+++||..++........... ...+..+|+.+|.|
T Consensus 19 ~~~~s~~~~~F~~~~-~-~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~---~~~~~~~~~~~D~d 92 (108)
T d1rroa_ 19 QDPDTFEPQKFFQTS-G-L-SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT---ESETKSLMDAADND 92 (108)
T ss_dssp CSTTCCCHHHHHHHH-S-G-GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC---HHHHHHHHHHHCCS
T ss_pred ccCCCccHHHHHHHH-c-c-CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCC---HHHHHHHHHHhCCC
Confidence 455667777776554 1 1 1234567777777788888888888877766543221111111 12456677777888
Q ss_pred CCCcccHHHHHHhhc
Q 008197 508 RDGFITPEELRMHTG 522 (574)
Q Consensus 508 ~~G~I~~~El~~~l~ 522 (574)
+||.|+.+||..+++
T Consensus 93 ~dG~I~~~EF~~~m~ 107 (108)
T d1rroa_ 93 GDGKIGADEFQEMVH 107 (108)
T ss_dssp SSSSEEHHHHHHHHT
T ss_pred CCCeEeHHHHHHHHc
Confidence 888888887777664
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.98 E-value=2.6e-10 Score=89.30 Aligned_cols=70 Identities=27% Similarity=0.404 Sum_probs=59.4
Q ss_pred HHhhhhccccccc-cCCCC-CCcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 413 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~-G~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..++.|.++|..+ |.|++ |+|+.+||+.+|..... ...+++.++.+|+.+|.|+||.|+|+||+.++...
T Consensus 6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 4467899999988 88875 99999999999976432 34678999999999999999999999999887543
|
| >d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]
Probab=98.97 E-value=2.6e-10 Score=97.92 Aligned_cols=101 Identities=24% Similarity=0.360 Sum_probs=79.3
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 495 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~ 495 (574)
..+..+|..+|.+++|.|+..||..++..........+.+..+|+.+|.|++|.|+.+||...+........ ..
T Consensus 45 ~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~ 118 (146)
T d1exra_ 45 AELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLT------DD 118 (146)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCC------HH
T ss_pred HHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCC------HH
Confidence 455777888999999999999999988543333334568889999999999999999999887764432111 13
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
.+..+|+.+|.|++|.|+.+||.+++.
T Consensus 119 ~~~~i~~~~D~d~dG~i~~~eF~~~l~ 145 (146)
T d1exra_ 119 EVDEMIREADIDGDGHINYEEFVRMMV 145 (146)
T ss_dssp HHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence 567799999999999999999988764
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.97 E-value=5.5e-10 Score=87.97 Aligned_cols=60 Identities=17% Similarity=0.295 Sum_probs=52.2
Q ss_pred HHHHHHHHHhc-CCCCC-CcccHHHHHHhhcccC--------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...+..+|..| |.||+ |+|+.+||+.++...+ .++++|+.+|.|+||.|+|+||+.+|.+
T Consensus 13 i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 13 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 35678899988 88885 9999999999886532 4999999999999999999999999975
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.95 E-value=3.1e-10 Score=88.30 Aligned_cols=60 Identities=25% Similarity=0.443 Sum_probs=52.1
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|..||.| +|+|+.+||+.++.... .++.+|+.+|.|+||.|+|+||+.+|.+.
T Consensus 8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 35688899999987 89999999999886422 38999999999999999999999998653
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.94 E-value=2.7e-10 Score=85.84 Aligned_cols=60 Identities=27% Similarity=0.464 Sum_probs=51.5
Q ss_pred HHHHHHHHhcCC-C-CCCcccHHHHHHhhcccC--------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 495 LRSQAAFEKFDI-D-RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 495 ~~~~~~F~~~D~-d-~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
..++.+|..||. | ++|+|+.+||+.++.... +++.+|+.+|.|+||.|+|+||+.+|.+.
T Consensus 7 ~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l 76 (78)
T d1cb1a_ 7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 468889999964 4 469999999999887652 48999999999999999999999999864
|
| >d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]
Probab=98.93 E-value=3.8e-10 Score=88.31 Aligned_cols=61 Identities=20% Similarity=0.266 Sum_probs=52.3
Q ss_pred HHHHHHHHHhc-CCCCC-CcccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|..| |+||+ |+|+.+||+.++...+ .+..+|+.+|.|+||.|+|+||+.+|.+.
T Consensus 8 i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l 81 (93)
T d1zfsa1 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (93)
T ss_dssp HHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 35688899998 88875 9999999999886543 38899999999999999999999999653
|
| >d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a13 [TaxId: 9606]
Probab=98.93 E-value=2.9e-10 Score=89.64 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=58.5
Q ss_pred HHhhhhccccccc-cCCCC-CCcCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~-G~i~~~El~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..++.+.++|..| |.|++ |+|+..||+.+|.+.++ ...+...++.+|+.+|.|+||.|+|+||+.++..
T Consensus 11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~ 82 (98)
T d1yuta1 11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 82 (98)
T ss_dssp HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4577899999998 78875 99999999999976544 3455667999999999999999999999988764
|
| >d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calbindin D9K domain: Calbindin D9K species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.93 E-value=8.8e-11 Score=88.56 Aligned_cols=69 Identities=23% Similarity=0.387 Sum_probs=57.6
Q ss_pred HHhhhhccccccccC-C-CCCCcCHHHHHHHHHhhC-CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDV-D-KNGSISLEEMRQALAKDL-PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~-d-~~G~i~~~El~~~l~~~~-~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
...++|+.+|..||. + ++|+|+..||+.+|...+ +...+..+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~ 75 (78)
T d1cb1a_ 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 456789999999975 3 458999999999997754 34556678999999999999999999999987754
|
| >d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]
Probab=98.92 E-value=1.4e-10 Score=90.35 Aligned_cols=69 Identities=20% Similarity=0.332 Sum_probs=58.0
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..++.+..+|..+|.| +|+|+.+||..+|.... +...+...++++|+.+|.|+||.|+|+||+.++...
T Consensus 6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l 78 (92)
T d1a4pa_ 6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (92)
T ss_dssp HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence 4578899999999987 89999999999996532 223456789999999999999999999999877543
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.90 E-value=2.3e-10 Score=87.87 Aligned_cols=69 Identities=20% Similarity=0.383 Sum_probs=60.7
Q ss_pred HHhhhhccccccc-cCCCCCC-cCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAI-DVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~G~-i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..++.+..+|..+ |+||+|. ++.+||+.++...+|...+++.++.+++.+|.|+||.|+|+||+.++..
T Consensus 7 ~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~ 77 (87)
T d1xk4a1 7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4567888999888 8999986 5999999999777887788889999999999999999999999987754
|
| >d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: DJ-1-binding protein, DJBP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=5.8e-10 Score=85.44 Aligned_cols=57 Identities=25% Similarity=0.394 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cHHHHHHHhCCCCCCcccHHHHHHHH
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 551 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~~~~~~~~D~d~dG~i~~~EF~~~~ 551 (574)
..+.++|+.||.+++|+|+.+||+.++...+ ++..++..+|.|++|.|+|.||+..+
T Consensus 20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f 82 (83)
T d1wlza1 20 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF 82 (83)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence 3677899999999999999999999998776 48999999999999999999999875
|
| >d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=5.6e-10 Score=87.70 Aligned_cols=59 Identities=24% Similarity=0.300 Sum_probs=53.4
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..++.+|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+|+||+.+|+-
T Consensus 10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~L 72 (95)
T d1c07a_ 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 3677899999999999999999999998776 4899999999999999999999987753
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.90 E-value=6.3e-10 Score=86.41 Aligned_cols=70 Identities=23% Similarity=0.383 Sum_probs=59.5
Q ss_pred HHhhhhccccccc-cCCCCC-CcCHHHHHHHHHhhC----CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 413 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~G-~i~~~El~~~l~~~~----~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..++.+..+|..+ |.||+| +|+..||+.+|.+.+ +...+...++++++.+|.|+||.|+|+||+.++...
T Consensus 6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l 81 (93)
T d1ksoa_ 6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 81 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 4567888999987 999999 599999999997643 334568899999999999999999999999877543
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=6.4e-10 Score=87.22 Aligned_cols=69 Identities=23% Similarity=0.351 Sum_probs=61.0
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.+++++.+++.++|+.+| +++|+|+.+|+..+|.+ .| .+..+++.|++.+|.|++|.|+++||+.++..
T Consensus 3 ~ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~-~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 3 AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp SSCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTT-SS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 468889999999999999 89999999999999944 55 56789999999999999999999999876543
|
| >d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a3 [TaxId: 9606]
Probab=98.89 E-value=6.2e-10 Score=86.45 Aligned_cols=62 Identities=16% Similarity=0.192 Sum_probs=53.2
Q ss_pred HHHHHHHHHhc-CCCCCC-cccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 494 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
...+..+|..| |+||+| .|+.+||++++.... ++..+|+.+|.|+||.|+|+||+.+|.+..
T Consensus 8 i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~ 82 (93)
T d1ksoa_ 8 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence 34677899988 999999 599999999886432 389999999999999999999999998643
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.88 E-value=1.3e-09 Score=84.77 Aligned_cols=62 Identities=16% Similarity=0.251 Sum_probs=52.1
Q ss_pred HHHHHHHHHhc-CCCCCC-cccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 494 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
...+..+|..| |.||+| +|+.+||+.++.... ++.++|+.+|.|+||.|+|+||+.+|.+..
T Consensus 8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~ 82 (93)
T d3c1va1 8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Confidence 34688899998 777755 799999999986532 388999999999999999999999998643
|
| >d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a4 [TaxId: 9606]
Probab=98.88 E-value=1e-09 Score=85.49 Aligned_cols=69 Identities=19% Similarity=0.354 Sum_probs=58.1
Q ss_pred HHhhhhccccccc-cCCCCC-CcCHHHHHHHHHhh----CCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~G-~i~~~El~~~l~~~----~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..++.+.++|..| |.|++| +|+.+||+.+|... ++...++++++++|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~ 80 (93)
T d3c1va1 6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 80 (93)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence 3567899999998 677655 79999999999653 345678899999999999999999999999987754
|
| >d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]
Probab=98.86 E-value=2.4e-09 Score=82.04 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=51.9
Q ss_pred HHHHHHHHhc-CCCCCCc-ccHHHHHHhhcc-cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 495 LRSQAAFEKF-DIDRDGF-ITPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 495 ~~~~~~F~~~-D~d~~G~-I~~~El~~~l~~-~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
..+..+|..| |+||+|. ++.+||+.++.. .+ .++++|+++|.|+||.|+|+||+.+|.+.
T Consensus 10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l 78 (87)
T d1xk4a1 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (87)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4677889888 9999996 499999998864 34 49999999999999999999999999863
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.85 E-value=6e-10 Score=85.75 Aligned_cols=69 Identities=22% Similarity=0.386 Sum_probs=59.4
Q ss_pred HHhhhhccccccc-cCCCCC-CcCHHHHHHHHHhhC--CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDL--PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~G-~i~~~El~~~l~~~~--~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..+.++|..+ |+|++| +|+..||+.++...+ +...+++.++.+++.+|.|+||.|+|+||+.++..
T Consensus 6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~ 78 (89)
T d1k8ua_ 6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA 78 (89)
T ss_dssp HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 4567889999988 999999 699999999997643 45566789999999999999999999999987754
|
| >d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Reps1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.84 E-value=1.7e-09 Score=84.42 Aligned_cols=59 Identities=24% Similarity=0.350 Sum_probs=52.8
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...+.+|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+|+||+.+|+-
T Consensus 9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~l 71 (92)
T d1fi6a_ 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHL 71 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHHHHHHH
Confidence 4677899999999999999999999998766 4899999999999999999999976653
|
| >d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=6.4e-09 Score=88.29 Aligned_cols=98 Identities=16% Similarity=0.214 Sum_probs=80.2
Q ss_pred HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------
Q 008197 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 525 (574)
Q Consensus 452 ~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------ 525 (574)
.++++++|..+|.|++|.|++.||..++........ ...+...|..+|.+++|.|+.+||...+....
T Consensus 5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~------~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~ 78 (141)
T d2obha1 5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK------KEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK 78 (141)
T ss_dssp HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchh------HHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccH
Confidence 357899999999999999999999987654322211 23566789999999999999999988765432
Q ss_pred -cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 526 -SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 526 -~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
.+..+|..+|.+++|.|+.+||..++...+
T Consensus 79 ~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g 109 (141)
T d2obha1 79 EEILKAFKLFDDDETGKISFKNLKRVAKELG 109 (141)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccCCCCccHHHHHHHHHHhC
Confidence 378899999999999999999999998654
|
| >d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.81 E-value=5e-09 Score=89.53 Aligned_cols=98 Identities=16% Similarity=0.087 Sum_probs=76.0
Q ss_pred HHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCC--CCCcccHHHHHHhhcccC----
Q 008197 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID--RDGFITPEELRMHTGLKG---- 525 (574)
Q Consensus 452 ~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d--~~G~I~~~El~~~l~~~~---- 525 (574)
.++++++|..+|.|++|.|+.+||..++........ ...+..++..+|.+ ++|.|+.+||..++....
T Consensus 3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~------~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~ 76 (145)
T d2mysc_ 3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPT------NAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD 76 (145)
T ss_pred HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcch------hhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc
Confidence 468899999999999999999999987754322111 12455567766554 689999999988764321
Q ss_pred -----cHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 526 -----SIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 526 -----~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
++..+|+.+|.|++|.|+.+||..+|...+
T Consensus 77 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g 111 (145)
T d2mysc_ 77 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG 111 (145)
T ss_pred cchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhC
Confidence 377899999999999999999999997643
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.80 E-value=2.8e-09 Score=84.29 Aligned_cols=59 Identities=25% Similarity=0.314 Sum_probs=50.9
Q ss_pred HHHHHHHHHhcCCCCCCcccHHHHHHhhcccC-------------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 494 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 494 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~-------------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...+..+|..|| +++|.|+.+||+.++.... .++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus 9 i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 9 IIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 446777888887 7899999999999887532 3889999999999999999999999976
|
| >d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.79 E-value=1.6e-08 Score=85.89 Aligned_cols=90 Identities=7% Similarity=0.057 Sum_probs=61.8
Q ss_pred CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCC
Q 008197 428 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID 507 (574)
Q Consensus 428 d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 507 (574)
+++|.|+..||..++...+....+.+.+...|+.+|.|++|.|+.+||..++....... . ..++..+|+.+|.|
T Consensus 51 ~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~l--t----~~e~~~l~~~~d~~ 124 (142)
T d1wdcb_ 51 EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNF--N----KDEMRMTFKEAPVE 124 (142)
T ss_dssp TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCC--C----HHHHHHHHHHCCEE
T ss_pred hccCccccccccccccccccccchhhhHHHhhhhhcccCCCcccHHHHHHHHHHccccC--C----HHHHHHHHHHhCCC
Confidence 56778888888877766565556677788888888888888888888877664432111 1 12455677788876
Q ss_pred CCCcccHHHHHHhhccc
Q 008197 508 RDGFITPEELRMHTGLK 524 (574)
Q Consensus 508 ~~G~I~~~El~~~l~~~ 524 (574)
+|.|+.+||..+++..
T Consensus 125 -~G~I~y~eF~~~l~~~ 140 (142)
T d1wdcb_ 125 -GGKFDYVKFTAMIKGS 140 (142)
T ss_dssp -TTEECHHHHHHHHHTS
T ss_pred -CCEEcHHHHHHHHhcC
Confidence 4888888887777544
|
| >d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.79 E-value=1.3e-09 Score=94.66 Aligned_cols=66 Identities=29% Similarity=0.463 Sum_probs=58.7
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
..++++.+|..||.|++|+|+.+||..++ ..+|...++++++.+|+.+|.|+||.|+|+||+.+|.
T Consensus 89 ~~~~l~~~F~~~D~d~~G~I~~~e~~~~~-~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~ 154 (156)
T d1dtla_ 89 SEEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154 (156)
T ss_dssp HHHHHHHHHHHHCTTCSSEEEHHHHGGGG-TTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCCcCcHHHHHHHH-hhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence 34678899999999999999999999998 5689999999999999999999999999999998763
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=7e-10 Score=89.44 Aligned_cols=70 Identities=23% Similarity=0.269 Sum_probs=61.6
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.+++++.+.+.++|+.+|+|++|+|+.+|+..+|.+ .| .+..++..|++.+|.|++|.|+++||+.+|..
T Consensus 15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~-s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L 84 (110)
T d1iq3a_ 15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-SK--LSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-SS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHh-hc--cchHHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence 578888999999999999999999999999999844 44 45568999999999999999999999876653
|
| >d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Nucleobindin 1 (CALNUC) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=1.4e-09 Score=86.30 Aligned_cols=64 Identities=23% Similarity=0.365 Sum_probs=51.4
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhC---CC------------CccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDL---PW------------KLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~---~~------------~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.++.+|..+|.|+||+|+.+||..++.+.. .. ......++.+|..+|.|+||.||++||+.++.
T Consensus 17 ~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~ 95 (99)
T d1snla_ 17 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95 (99)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 367899999999999999999999985421 10 11234678899999999999999999997653
|
| >d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a6 [TaxId: 9606]
Probab=98.76 E-value=2.8e-09 Score=81.90 Aligned_cols=61 Identities=25% Similarity=0.338 Sum_probs=52.6
Q ss_pred HHHHHHHHHhc-CCCCCC-cccHHHHHHhhcc---cC------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGL---KG------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~---~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|..| |+||+| .|+..||+.++.. .+ +++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 8 i~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l 79 (89)
T d1k8ua_ 8 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 79 (89)
T ss_dssp HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 34677899988 999999 6999999998864 22 39999999999999999999999999764
|
| >d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.76 E-value=1.5e-08 Score=88.15 Aligned_cols=96 Identities=20% Similarity=0.219 Sum_probs=76.0
Q ss_pred HHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc---------
Q 008197 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------- 524 (574)
Q Consensus 454 ~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~--------- 524 (574)
+++++|..+|.|++|.|+++||..++........ ...+..+|..+|.+++|.++..|+...+...
T Consensus 21 el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 94 (162)
T d1topa_ 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT------KEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKS 94 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCC------HHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchh------HHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCc
Confidence 5778999999999999999999876654322211 2356779999999999999999986544211
Q ss_pred -CcHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 525 -GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 525 -~~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
..+..+|+.+|.|++|.|+.+||..++....
T Consensus 95 ~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~ 126 (162)
T d1topa_ 95 EEELANCFRIFDKNADGFIDIEELGEILRATG 126 (162)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhC
Confidence 1366789999999999999999999998643
|
| >d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Light Chain Mlc1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=2.3e-09 Score=91.90 Aligned_cols=65 Identities=26% Similarity=0.556 Sum_probs=59.8
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.+.+.++|..+|.+++|+|+.+||..+|.. +|...+++++..++..+|.|+||.|+|+||+..+.
T Consensus 80 ~~~l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~ 144 (146)
T d1m45a_ 80 TEDFVKAFQVFDKESTGKVSVGDLRYMLTG-LGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 144 (146)
T ss_dssp THHHHHHHHTTCSSSSSEEEHHHHHHHHHH-STTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccccchhhhhhhhcc-cCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 356888999999999999999999999954 89999999999999999999999999999997654
|
| >d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]
Probab=98.76 E-value=7.2e-10 Score=87.82 Aligned_cols=70 Identities=19% Similarity=0.343 Sum_probs=56.8
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCC------CccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~------~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.+..+..+.++|+.+| +++|.|+..||..+|...++. ..+...++.+|+.+|.|+||.|+|+||+.++..
T Consensus 5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~ 80 (100)
T d1psra_ 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 3456778888999987 789999999999999664432 123456899999999999999999999987754
|
| >d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Cdc4p species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.75 E-value=2.2e-09 Score=91.29 Aligned_cols=65 Identities=29% Similarity=0.537 Sum_probs=59.3
Q ss_pred HhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 414 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 414 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
..+++.++|..+|.|++|+|+.+||..+|.. +|...++++++.+++.+|.+ ||.|+|+||+..|.
T Consensus 74 ~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~ 138 (140)
T d1ggwa_ 74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138 (140)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHH-HHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcchHHHHHHHHHH-cCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence 3457889999999999999999999999954 89999999999999999988 99999999998764
|
| >d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
Probab=98.74 E-value=4.5e-09 Score=94.22 Aligned_cols=68 Identities=19% Similarity=0.143 Sum_probs=56.8
Q ss_pred HHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.....+..+|..+|.|++|+|+.+||..++. .+|..+++++++.+|+.+|.|+||.|+|+||+..+..
T Consensus 104 ~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~-~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~ 171 (189)
T d1qv0a_ 104 LIREWGDAVFDIFDKDGSGTITLDEWKAYGK-ISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG 171 (189)
T ss_dssp HHHHHHHHHHHHTC----CEECHHHHHHHHH-HHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCCcccchhhHHHHH-hcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 3345677789999999999999999999995 4899999999999999999999999999999987654
|
| >d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Pob1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=8.6e-09 Score=82.90 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..+..+|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+++||+.+|+-
T Consensus 22 ~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L 84 (110)
T d1iq3a_ 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHL 84 (110)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence 3677899999999999999999999998766 5999999999999999999999977753
|
| >d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calmodulin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.71 E-value=1.5e-08 Score=86.55 Aligned_cols=99 Identities=21% Similarity=0.317 Sum_probs=59.0
Q ss_pred hhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHH
Q 008197 417 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 496 (574)
Q Consensus 417 ~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~ 496 (574)
.+..++..++.++++.++.+++..++........+.+.+..+|+.+|.|++|.|+.+||..++........ ...
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~------~~~ 120 (146)
T d1lkja_ 47 EVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT------DAE 120 (146)
T ss_dssp HHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCC------HHH
T ss_pred HHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCccc------HHH
Confidence 34445566666677777777776666443333334556666777777777777777777665543321111 124
Q ss_pred HHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 497 SQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 497 ~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
+..+|+.+| |++|.|+.+||..++.
T Consensus 121 ~~~~~~~~d-d~dG~I~~~eF~~~m~ 145 (146)
T d1lkja_ 121 VDDMLREVS-DGSGEINIQQFAALLS 145 (146)
T ss_dssp HHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred HHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence 555667776 7777777777766654
|
| >d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=1.2e-08 Score=79.81 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=52.1
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
...+++|+.+| +++|+|+.+|++.++...| ++..+++.+|.|+||.|+++||+.+|+-
T Consensus 10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~L 71 (95)
T d2jxca1 10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFL 71 (95)
T ss_dssp HHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHH
Confidence 46788999999 8999999999999998877 4899999999999999999999876653
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.70 E-value=1e-08 Score=78.11 Aligned_cols=69 Identities=29% Similarity=0.386 Sum_probs=56.7
Q ss_pred HHhhhhccccccc-cCCCCC-CcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~G-~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..+.++|..+ +.++++ +|+++||+.+|.+.++ ...+++.++.+|+.+|.|+||.|+|+||+.++..
T Consensus 5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~ 79 (87)
T d1e8aa_ 5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 79 (87)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence 4567889999988 556665 6999999999976543 3446789999999999999999999999987654
|
| >d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.69 E-value=6e-09 Score=89.05 Aligned_cols=66 Identities=18% Similarity=0.248 Sum_probs=60.5
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
...+.++|+.||.+++|+|+..||..+|. .+|...+++++..+++.+|.|++|.|+|.||+.++..
T Consensus 76 ~~~l~~aF~~fD~~~~g~I~~~el~~~l~-~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~ 141 (145)
T d2mysb_ 76 EDVIMGAFKVLDPDGKGSIKKSFLEELLT-TGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 141 (145)
T ss_pred HHHHHHHHHhhhhcccchhhHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence 34688899999999999999999999995 5899999999999999999999999999999987753
|
| >d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Sandworm (Nereis diversicolor) [TaxId: 126592]
Probab=98.69 E-value=3.7e-08 Score=86.67 Aligned_cols=105 Identities=11% Similarity=0.166 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhcCCCCcceehhchHHHHhhhhccc---ccchHHHHHHHHHHHHhc--CCCCCCcccHHHHHHhhcccC-
Q 008197 452 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE---EHDSEKWHLRSQAAFEKF--DIDRDGFITPEELRMHTGLKG- 525 (574)
Q Consensus 452 ~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~---~~~~~~~~~~~~~~F~~~--D~d~~G~I~~~El~~~l~~~~- 525 (574)
..+++.+|+.+|.|+||.|+++||..++....... ..............|..+ |.+++|.|+.+|+...+....
T Consensus 5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~ 84 (174)
T d2scpa_ 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK 84 (174)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence 35788999999999999999999988765432211 111122223334445543 778899999999987664321
Q ss_pred ----------cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 526 ----------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 526 ----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
.+..+|+.+|.|+||.|+.+||..++.....
T Consensus 85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~ 125 (174)
T d2scpa_ 85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGL 125 (174)
T ss_dssp CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC
T ss_pred chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhh
Confidence 2778999999999999999999999876543
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.68 E-value=7.3e-09 Score=62.04 Aligned_cols=31 Identities=35% Similarity=0.508 Sum_probs=28.4
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccC
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG 525 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~ 525 (574)
+++++||++||+||+|+|+..||+.++..+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence 3688899999999999999999999998775
|
| >d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-regulated photoprotein species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
Probab=98.67 E-value=1.1e-08 Score=91.43 Aligned_cols=70 Identities=21% Similarity=0.223 Sum_probs=61.6
Q ss_pred chHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 411 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 411 ~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
.......+..+|..+|.|++|+|+.+||..+|. .+|...+.++++.+|+.+|.|+||.|+|+||+..+..
T Consensus 100 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~-~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~ 169 (187)
T d1uhka1 100 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTK-AAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLG 169 (187)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCcccchHHHHHHHH-HhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 334445678899999999999999999999995 4888999999999999999999999999999876543
|
| >d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium-dependent protein kinase sk5 CLD species: Soybean (Glycine max) [TaxId: 3847]
Probab=98.67 E-value=2.3e-08 Score=88.85 Aligned_cols=96 Identities=21% Similarity=0.255 Sum_probs=78.9
Q ss_pred HHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC------cH
Q 008197 454 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SI 527 (574)
Q Consensus 454 ~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~------~~ 527 (574)
+++++|+.+|.|++|.|+++||..++.....-. . ...+..+|+.+|.+++|.|+.+|+..++.... .+
T Consensus 11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~---~---~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l 84 (182)
T d1s6ia_ 11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSEL---M---ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENL 84 (182)
T ss_dssp SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCC---C---HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCST
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCcc---c---cccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHH
Confidence 578899999999999999999998876542211 1 13577799999999999999999987654433 48
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 528 DPLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 528 ~~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
..+|..+|.+++|.|+.+||..++....
T Consensus 85 ~~aF~~~D~d~~G~i~~~el~~~l~~~g 112 (182)
T d1s6ia_ 85 VSAFSYFDKDGSGYITLDEIQQACKDFG 112 (182)
T ss_dssp HHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred HHHHHHHhhcCCCccchhhhhhhhhhcC
Confidence 8899999999999999999999887654
|
| >d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]
Probab=98.66 E-value=2e-08 Score=76.49 Aligned_cols=61 Identities=18% Similarity=0.216 Sum_probs=50.8
Q ss_pred HHHHHHHHHhc-CCCCCC-cccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~G-~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|..| +++|++ +|+.+||+.++.... .++++|+.+|.|+||.|+|+||+.+|.+.
T Consensus 7 i~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l 80 (87)
T d1e8aa_ 7 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 80 (87)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 34677899988 667665 699999999886421 39999999999999999999999999753
|
| >d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Sarcoplasmic calcium-binding protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=98.66 E-value=2.7e-08 Score=88.47 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=77.0
Q ss_pred HHHHHHHHHh-hcCCCCcceehhchHHHHhhhhccccc---c------hHHHHHHHHHHHHhcCCCCCCcccHHHHHHhh
Q 008197 452 ESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEH---D------SEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 521 (574)
Q Consensus 452 ~~~~~~~~~~-~D~d~dg~I~f~EF~~~~~~~~~~~~~---~------~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l 521 (574)
..+++.+|.. +|.|+||.|+++||..++......... . ...........+...|.+++|.|+.+++..++
T Consensus 7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~ 86 (185)
T d2sasa_ 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW 86 (185)
T ss_dssp HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence 3468899997 499999999999998876543221110 0 01112223456888899999999999998766
Q ss_pred cccC---------------cHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 008197 522 GLKG---------------SIDPLLEEADIDKDGRISLSEFRRLLRTASI 556 (574)
Q Consensus 522 ~~~~---------------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~~~ 556 (574)
.... .+..+|+.+|.|++|.|+.+||..++....+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l 136 (185)
T d2sasa_ 87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL 136 (185)
T ss_dssp HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCC
Confidence 4221 2788999999999999999999999975543
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.65 E-value=1.4e-08 Score=79.93 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=52.4
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..+++|+.+|+|++|+|+.+|++.++...+ ++..+++.+|.|+||.|+++||+.+|+-
T Consensus 12 ~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~L 73 (99)
T d1qjta_ 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence 345689999999999999999999998776 4899999999999999999999988863
|
| >d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Essential Chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=8.2e-09 Score=87.43 Aligned_cols=66 Identities=23% Similarity=0.424 Sum_probs=56.1
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHH
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT 479 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~ 479 (574)
....+++.++|..+|.|++|+|+.+||+.+|.. +|...++++++.++.. |.|+||.|+|+||+..+
T Consensus 73 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l 138 (139)
T d1w7jb1 73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTT-LGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI 138 (139)
T ss_dssp -----CCHHHHHTTCTTSSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred ccHHHHHHHhhhhccCCCCCeEeHHHHHHHHHH-hCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence 344567889999999999999999999999954 8999999999999975 88999999999999754
|
| >d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Myosin Regulatory Chain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=98.62 E-value=1.1e-07 Score=81.57 Aligned_cols=109 Identities=14% Similarity=0.130 Sum_probs=76.1
Q ss_pred hhhccccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCC-CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 404 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~-~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
+.+....+.+++..+. ..|.+++|.|+.+||..++..... ...+..++...|+.+|.+++|.|+.+||..++...
T Consensus 36 ~~lG~~~t~~e~~~~~----~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~ 111 (152)
T d1wdcc_ 36 RCLGINPRNEDVFAVG----GTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTAL 111 (152)
T ss_dssp HHTTCCCCHHHHHHTT----CCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS
T ss_pred HHhccCccHhhhhhhh----hhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHc
Confidence 3344445666655443 357788999999999988865443 33556788899999999999999999998877543
Q ss_pred hcccccchHHHHHHHHHHHHhcCC--CCCCcccHHHHHHhhc
Q 008197 483 HQLEEHDSEKWHLRSQAAFEKFDI--DRDGFITPEELRMHTG 522 (574)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~F~~~D~--d~~G~I~~~El~~~l~ 522 (574)
....+ ..++..+++.+|. |++|.|+.+||.+.+.
T Consensus 112 g~~ls------~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~ 147 (152)
T d1wdcc_ 112 GERLS------DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM 147 (152)
T ss_dssp SSCCC------HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred CCCCC------HHHHHHHHHHhccCCCCCCEEEHHHHHHHHh
Confidence 22111 1246678888875 4568999999987653
|
| >d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Eps15 homology domain (EH domain) domain: Eps15 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.57 E-value=1.4e-08 Score=80.05 Aligned_cols=63 Identities=16% Similarity=0.200 Sum_probs=55.5
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+.++|+.+|.|++|+|+.+|+..++.+ .| .+..++..|++.+|.|++|.|+++||+.+|..
T Consensus 11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~L 73 (99)
T d1qjta_ 11 PVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp THHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHH-cC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHH
Confidence 35668899999999999999999999954 44 57889999999999999999999999977654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.57 E-value=1.6e-07 Score=88.47 Aligned_cols=86 Identities=17% Similarity=0.140 Sum_probs=63.7
Q ss_pred ceeecccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcceEEE
Q 008197 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVKFYN 176 (574)
Q Consensus 97 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~~~~ 176 (574)
.|++.+..+.++.+.||++. ..+..++||....... .....+.+|..++..|..+--+++++.
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~---------------~~~~~~~~E~~~l~~l~~~vpvP~vl~ 77 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYK---------------GTTYDVEREKDMMLWLEGKLPVPKVLH 77 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGT---------------TSTTCHHHHHHHHHHHTTTSCCCCEEE
T ss_pred ceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcc---------------cchhhHHHHHHHHHHHhccCCCCcEEE
Confidence 56777766666678999985 4566788898754311 122346789999998865655788899
Q ss_pred EEEcCCEEEEEEeccCCCchHHH
Q 008197 177 AFEDDNYVYIAMELCEGGELLDR 199 (574)
Q Consensus 177 ~~~~~~~~~lv~e~~~gg~L~~~ 199 (574)
+...++..++||++++|.++.+.
T Consensus 78 ~~~~~~~~~lv~~~l~G~~~~~~ 100 (263)
T d1j7la_ 78 FERHDGWSNLLMSEADGVLCSEE 100 (263)
T ss_dssp EEEETTEEEEEEECCSSEEHHHH
T ss_pred EEecCCceEEEEEeccccccccc
Confidence 88889999999999999887543
|
| >d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calerythrin species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.50 E-value=1e-07 Score=83.70 Aligned_cols=98 Identities=19% Similarity=0.185 Sum_probs=72.4
Q ss_pred ccccccccCCCCCCcCHHHHHHHHHhhCCCCc-------cHHHHHHHHHhhcCCCCcceehhchHHHHhhhhcccccchH
Q 008197 419 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKL-------KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 491 (574)
Q Consensus 419 ~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~-------~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~ 491 (574)
...+...|.+++|.|+..++...+........ ....+..+|..+|.|++|.|+.+||..++... .+.
T Consensus 61 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~-~~~----- 134 (176)
T d1nyaa_ 61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL-GMS----- 134 (176)
T ss_dssp HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT-TCC-----
T ss_pred HHHHHHhcCCCCCcccHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc-CCc-----
Confidence 34566778899999999998887755322221 13457789999999999999999998776532 111
Q ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 492 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 492 ~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
...+..+|+.+|.|++|.|+.+||..++...
T Consensus 135 --~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~ 165 (176)
T d1nyaa_ 135 --KAEAAEAFNQVDTNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp --HHHHHHHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred --HHHHHHHHHHHCCCCCCcEeHHHHHHHHHHH
Confidence 1357778999999999999999998877643
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.40 E-value=2.3e-07 Score=70.67 Aligned_cols=69 Identities=20% Similarity=0.369 Sum_probs=55.6
Q ss_pred HHhhhhccccccc-cCCCC-CCcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~-D~d~~-G~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..+..+|..+ ..+|+ ++|++.||+.+|.+.++ ....+..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 3466788899988 45555 57999999999987554 3344678999999999999999999999977654
|
| >d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phospholipase C-beta-2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.29 E-value=4.4e-08 Score=85.79 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=68.2
Q ss_pred HHHHHHHh--hcCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhcccC---cHH
Q 008197 454 RVLEILQA--IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---SID 528 (574)
Q Consensus 454 ~~~~~~~~--~D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~---~~~ 528 (574)
.+++.+.. +|.|++|.|+++|+..++..... ........+..+|...|.+++|.|+.+||..++..+. ++.
T Consensus 6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~----~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~ 81 (170)
T d2zkmx1 6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRK----RVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEID 81 (170)
T ss_dssp HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHH----HHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhh----hHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHH
Confidence 44555554 79999999999999877643211 1111233566689999999999999999998776544 588
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHhcc
Q 008197 529 PLLEEADIDKDGRISLSEFRRLLRTAS 555 (574)
Q Consensus 529 ~~~~~~D~d~dG~i~~~EF~~~~~~~~ 555 (574)
.+|..+|.|++|.||.+||..+|...+
T Consensus 82 ~~F~~~d~d~~~~it~~el~~fL~~~Q 108 (170)
T d2zkmx1 82 EIFTSYHAKAKPYMTKEHLTKFINQKQ 108 (170)
T ss_dssp TTCC--------CCCHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCcccHHHHHHHHHHHh
Confidence 899999999999999999999998654
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.27 E-value=1.2e-06 Score=67.19 Aligned_cols=61 Identities=23% Similarity=0.354 Sum_probs=50.1
Q ss_pred HHHHHHHHHhc-CCCCC-CcccHHHHHHhhcccC-----------cHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 494 HLRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 494 ~~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~~-----------~~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
...+..+|..| .++|+ +.|+..||+.++...- .++.+|+.+|.|+||.|+|+||+.++.+.
T Consensus 8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 8 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 34677789887 55665 6799999999886521 39999999999999999999999998753
|
| >d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Cow (Bos taurus), s100b [TaxId: 9913]
Probab=98.26 E-value=1.2e-06 Score=66.67 Aligned_cols=59 Identities=20% Similarity=0.323 Sum_probs=49.4
Q ss_pred HHHHHHHHhc-CCCCC-CcccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKF-DIDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..+..+|..| .++|+ +.|+..||+.++.. .+ .++.+|+.+|.|+||.|+|+||+.++.+
T Consensus 9 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (90)
T d3cr5x1 9 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM 80 (90)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4677899998 56665 57999999998864 11 2899999999999999999999999875
|
| >d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2) species: Physarum polycephalum [TaxId: 5791]
Probab=98.23 E-value=1.3e-06 Score=84.37 Aligned_cols=102 Identities=23% Similarity=0.292 Sum_probs=72.8
Q ss_pred hhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccH-----------------------------HHHHHHHHhhcCC
Q 008197 415 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE-----------------------------SRVLEILQAIDCN 465 (574)
Q Consensus 415 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~-----------------------------~~~~~~~~~~D~d 465 (574)
...+...|..+|.+++|.++..++..++.. .+..... ..+..+|..+|.|
T Consensus 187 ~~~~~~~F~~~d~d~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d 265 (321)
T d1ij5a_ 187 LAALVADFRKIDTNSNGTLSRKEFREHFVR-LGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFD 265 (321)
T ss_dssp HHTSCCCHHHHCTTCCSEECHHHHHHHHHH-TTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred hhhhhHHHHHHhhcccccchhHHHhhhhhc-ccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcC
Confidence 345667788888888888888888887744 4433221 1223468888999
Q ss_pred CCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 466 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 466 ~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
++|.|+..||..++....... ... ..+..+|+.+|.|+||+|+.+||..++-
T Consensus 266 ~~G~Is~~E~~~~l~~~~~~~-~~~----~~~~~l~~~~D~d~dG~Is~~EF~~~ml 317 (321)
T d1ij5a_ 266 KSGQLSKEEVQKVLEDAHIPE-SAR----KKFEHQFSVVDVDDSKSLSYQEFVMLVL 317 (321)
T ss_dssp SCSSEEHHHHHHHHHHTTCCG-GGC----STHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCCc-CcH----HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 999999999988776543211 111 1456799999999999999999998764
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=98.19 E-value=5.1e-07 Score=51.25 Aligned_cols=30 Identities=33% Similarity=0.382 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhccc
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLK 524 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~ 524 (574)
+++.+.|++||+|+||+|+.+||..+++..
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr~t 33 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILRAT 33 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHHhc
Confidence 467789999999999999999999888643
|
| >d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]
Probab=98.17 E-value=2.3e-07 Score=55.40 Aligned_cols=31 Identities=35% Similarity=0.651 Sum_probs=27.2
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCC
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP 447 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~ 447 (574)
++|+++|+.||+|++|+|+..||+.+| +.+|
T Consensus 3 eel~eAF~~FDkDg~G~Is~~EL~~vm-~~lG 33 (33)
T d2hf5a1 3 EEIREAFRVFDKDGNGYISAAELRHVM-TNLG 33 (33)
T ss_dssp HHHHHHHHHHSSSCCSCBCHHHHHHHT-TSCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcC
Confidence 478999999999999999999999998 3354
|
| >d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]
Probab=98.15 E-value=5.5e-07 Score=69.11 Aligned_cols=69 Identities=22% Similarity=0.290 Sum_probs=54.0
Q ss_pred Hhhhhcccccccc-CCCC-CCcCHHHHHHHHHhhCC----CCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 414 ELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 414 ~~~~l~~~F~~~D-~d~~-G~i~~~El~~~l~~~~~----~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
.+..+..+|..+. .+|+ ++|++.||+.+|.+.++ .......++.+|+.+|.|+||.|+|+||+.++...
T Consensus 7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l 81 (95)
T d1qlsa_ 7 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 81 (95)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 4667888898874 4565 68999999999965332 22345679999999999999999999998876543
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.09 E-value=3.4e-06 Score=64.54 Aligned_cols=59 Identities=20% Similarity=0.330 Sum_probs=48.5
Q ss_pred HHHHHHHHhc-CCCCC-CcccHHHHHHhhcc-----cC------cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKF-DIDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~-----~~------~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..+..+|..| .++|+ +.|+..||+.++.. ++ .++.+|+.+|.|+||.|+|+||+.++.+
T Consensus 9 ~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4677789998 44554 58999999998864 11 3999999999999999999999999865
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.09 E-value=4.4e-06 Score=83.17 Aligned_cols=86 Identities=15% Similarity=0.264 Sum_probs=52.5
Q ss_pred cccccccCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC--CCcceEEEEE
Q 008197 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH--ENVVKFYNAF 178 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h--pniv~~~~~~ 178 (574)
.+.||.|....||++.+..+++.|+||.-....... ....+....+...|...|+.+..+ ..+++++.+
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~--------g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~- 101 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVV--------GESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS- 101 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC----------CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhccc--------CCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE-
Confidence 346899999999999887778899999754321000 000112334566788888877543 345666654
Q ss_pred EcCCEEEEEEeccCCCch
Q 008197 179 EDDNYVYIAMELCEGGEL 196 (574)
Q Consensus 179 ~~~~~~~lv~e~~~gg~L 196 (574)
++...++|||++++..+
T Consensus 102 -d~~~~~lvmE~L~~~~~ 118 (392)
T d2pula1 102 -DTEMAVTVMEDLSHLKI 118 (392)
T ss_dssp -ETTTTEEEECCCTTSEE
T ss_pred -cCCCCEEEEeccCCccc
Confidence 33445789999987654
|
| >d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100p [TaxId: 9606]
Probab=98.08 E-value=1.8e-06 Score=66.12 Aligned_cols=69 Identities=25% Similarity=0.400 Sum_probs=53.4
Q ss_pred HHhhhhcccccccc-CCCC-CCcCHHHHHHHHHhhCCCC----ccHHHHHHHHHhhcCCCCcceehhchHHHHhh
Q 008197 413 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPWK----LKESRVLEILQAIDCNTDGLVDFSEFVAATLH 481 (574)
Q Consensus 413 ~~~~~l~~~F~~~D-~d~~-G~i~~~El~~~l~~~~~~~----~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~ 481 (574)
..+..+..+|..+. .+++ ++|++.||+..+.+.++.- ..+..++.+|+.+|.|+||.|+|+||+.++..
T Consensus 6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 80 (94)
T d1j55a_ 6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (94)
T ss_dssp HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 34567888899873 4444 5899999999998766532 23457999999999999999999999987654
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=98.05 E-value=4.9e-06 Score=61.92 Aligned_cols=59 Identities=17% Similarity=0.264 Sum_probs=47.7
Q ss_pred HHHHHHHHhc-CCCCC-CcccHHHHHHhhccc--------C----cHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKF-DIDRD-GFITPEELRMHTGLK--------G----SIDPLLEEADIDKDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~-D~d~~-G~I~~~El~~~l~~~--------~----~~~~~~~~~D~d~dG~i~~~EF~~~~~~ 553 (574)
..+..+|..| .++|+ +.++..||+.++... . .++.+|+.+|.|+||.|+|+||+.++.+
T Consensus 10 ~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~ 82 (83)
T d1xk4c1 10 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 82 (83)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence 4677789988 34543 689999999887631 1 2789999999999999999999998864
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.01 E-value=3.1e-06 Score=68.25 Aligned_cols=79 Identities=13% Similarity=0.137 Sum_probs=63.9
Q ss_pred cccchHHhhhhcccccccc---CCCCCCcCHHHHHHHHHhhCCCC-ccHHHHHHHHHhhcCCCC--------cceehhch
Q 008197 408 STLDDEELADLRDQFDAID---VDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTD--------GLVDFSEF 475 (574)
Q Consensus 408 ~~~~~~~~~~l~~~F~~~D---~d~~G~i~~~El~~~l~~~~~~~-~~~~~~~~~~~~~D~d~d--------g~I~f~EF 475 (574)
+.++..+++.|.+.|.... .+.+|.|+.++|+.++...++.. .++..++.+|+.+|.++| |.|+|.||
T Consensus 20 T~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~ef 99 (118)
T d1tuza_ 20 MEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDV 99 (118)
T ss_dssp HHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHH
T ss_pred cCCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHH
Confidence 3578888999999997543 25689999999999997766655 357899999999999977 88999999
Q ss_pred HHHHhhhhccc
Q 008197 476 VAATLHVHQLE 486 (574)
Q Consensus 476 ~~~~~~~~~~~ 486 (574)
+..+.......
T Consensus 100 v~~LS~l~~G~ 110 (118)
T d1tuza_ 100 SCYFSLLEGGR 110 (118)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHcCCC
Confidence 98887665433
|
| >d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: S100 proteins domain: Calcyclin (S100) species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]
Probab=97.99 E-value=3.2e-06 Score=62.94 Aligned_cols=67 Identities=19% Similarity=0.325 Sum_probs=52.9
Q ss_pred Hhhhhcccccccc-CCC-CCCcCHHHHHHHHHhhCCCC-----ccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 414 ELADLRDQFDAID-VDK-NGSISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 414 ~~~~l~~~F~~~D-~d~-~G~i~~~El~~~l~~~~~~~-----~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.+..+..+|..+- .+| .+++++.||+..+.+.++.- ..+..++.+|+..|.|+||.|+|+||+.++.
T Consensus 8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~ 81 (83)
T d1xk4c1 8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA 81 (83)
T ss_dssp HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence 4567788898884 333 36899999999998866532 2345689999999999999999999997654
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.94 E-value=1e-05 Score=75.13 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=52.4
Q ss_pred ccccC-CeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCC-CCcceEEEEEEcC
Q 008197 104 LGHGQ-FGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGH-ENVVKFYNAFEDD 181 (574)
Q Consensus 104 lG~G~-~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~h-pniv~~~~~~~~~ 181 (574)
+..|. -+.||++.. ..+..+++|..... ....+..|...++.|..+ -.+++++.+..++
T Consensus 18 ~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~------------------~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~ 78 (255)
T d1nd4a_ 18 QTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------------------ALNELQDEAARLSWLATTGVPCAAVLDVVTEA 78 (255)
T ss_dssp CSCTTSSCEEEEEEC-TTSCCEEEEEECSC------------------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred cCCcccCCeEEEEEe-CCCCEEEEEeCCcc------------------CHhHHHHHHHHHHHHHhcCCCCCceeeecccc
Confidence 34444 468999873 45667888976543 112467888888887543 2267788888888
Q ss_pred CEEEEEEeccCCCch
Q 008197 182 NYVYIAMELCEGGEL 196 (574)
Q Consensus 182 ~~~~lv~e~~~gg~L 196 (574)
+..++||++++|.++
T Consensus 79 ~~~~~v~~~i~G~~~ 93 (255)
T d1nd4a_ 79 GRDWLLLGEVPGQDL 93 (255)
T ss_dssp SCEEEEEECCSSEET
T ss_pred cceEEEEEeeecccc
Confidence 899999999988765
|
| >d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Troponin C species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.88 E-value=2e-06 Score=48.79 Aligned_cols=28 Identities=29% Similarity=0.564 Sum_probs=25.3
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHH
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALA 443 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~ 443 (574)
++|.++|..||+|+||+|+.+||...+.
T Consensus 4 eELae~FRifDkNaDGyiD~eEl~~ilr 31 (34)
T d1ctda_ 4 EELANAFRIFDKNADGYIDIEELGEILR 31 (34)
T ss_dssp HHHHHHHHTTCCSSSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCcccccHHHHHHHHH
Confidence 5788899999999999999999999884
|
| >d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Diacylglycerol kinase alpha, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.54 E-value=4.5e-05 Score=61.18 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=65.9
Q ss_pred CCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhc------CCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHH
Q 008197 428 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID------CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 501 (574)
Q Consensus 428 d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D------~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F 501 (574)
+..+.|+.++|..+... . ..+..+|+.+++.|- ...+|.|++++|..++.......... ..-+..+|
T Consensus 3 ~~~s~l~p~~l~~L~~~-T--~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~----~~l~~rlF 75 (118)
T d1tuza_ 3 KERGLISPSDFAQLQKY-M--EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVP----RHLSLALF 75 (118)
T ss_dssp CCCSCSCHHHHHHHHHH-H--HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCC----HHHHHHHH
T ss_pred cccCCCCHHHHHHHHHH-c--CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCch----HHHHHHHH
Confidence 45678999999988744 2 345567888888873 23578999999998775443322111 12567799
Q ss_pred HhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 502 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 502 ~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
+.||+++++.++ ..++|.|+|.||+..|.
T Consensus 76 ~~FD~~~d~~~~----------------------~~~~g~I~f~efv~~LS 104 (118)
T d1tuza_ 76 QSFETGHCLNET----------------------NVTKDVVCLNDVSCYFS 104 (118)
T ss_dssp HHSCCCCCTTCC----------------------CCCSCCEEHHHHHHHHH
T ss_pred HHHccccccccc----------------------cCCCceeeHHHHHHHHH
Confidence 999999874443 33567777777777665
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.00019 Score=59.13 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=47.8
Q ss_pred HHHHHHhcCCC-CCCcccHHHHHHhhcccC----cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 497 SQAAFEKFDID-RDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 497 ~~~~F~~~D~d-~~G~I~~~El~~~l~~~~----~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
+.--|..+|.| +||.|+..|++.+...+- -+..+++..|.|+||.||+.||...+.
T Consensus 79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred ceeehhhcCCCCCCCccCHHHHHHHHHhhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 44469999999 599999999998765332 288999999999999999999999886
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00065 Score=65.06 Aligned_cols=71 Identities=13% Similarity=0.193 Sum_probs=47.1
Q ss_pred cCCeEEEEEEEcCCCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCc--ceEE-----EEEE
Q 008197 107 GQFGYTYVATDKANGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENV--VKFY-----NAFE 179 (574)
Q Consensus 107 G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpni--v~~~-----~~~~ 179 (574)
|.--.||++.. .+|..|++|+.+... ...+++..|...+..|..+ .| +..+ ..+.
T Consensus 33 s~EN~vy~v~~-~dg~~~VlK~~rp~~----------------~s~~~i~~E~~~l~~L~~~-gipv~~p~~~~g~~~~~ 94 (325)
T d1zyla1 33 SYENRVYQFQD-EDRRRFVVKFYRPER----------------WTADQILEEHQFALQLVND-EVPVAAPVAFNGQTLLN 94 (325)
T ss_dssp CSSSEEEEECC-TTCCCEEEEEECTTT----------------SCHHHHHHHHHHHHHHHHT-TCSBCCCCCBTTBSCEE
T ss_pred cccceeEEEEc-CCCCEEEEEEeCCCC----------------CCHHHHHHHHHHHHHHHhc-CCCCCCceecCCCeeee
Confidence 34468999974 578899999987642 1346678899988888522 22 1111 1234
Q ss_pred cCCEEEEEEeccCCCc
Q 008197 180 DDNYVYIAMELCEGGE 195 (574)
Q Consensus 180 ~~~~~~lv~e~~~gg~ 195 (574)
..+..+.|+++++|..
T Consensus 95 ~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 95 HQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp ETTEEEEEEECCCCEE
T ss_pred eeeEEEEEEeecCCcC
Confidence 5677899999997643
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.99 E-value=0.00093 Score=65.84 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=52.1
Q ss_pred cccccccCCeEEEEEEEcC-------CCCEEEEEEeccchhhhhhhhhhhhhccchhhHHHHHHHHHHHHHhcCCCCcce
Q 008197 101 GKLLGHGQFGYTYVATDKA-------NGDRVAVKKIEKNKILIRVVSFQDLKMILPIAVEDVKREVKILQALAGHENVVK 173 (574)
Q Consensus 101 ~~~lG~G~~g~Vy~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~~hpniv~ 173 (574)
++.|+.|-.-.+|++.... ..+.|.+++.-.. .......+|..+++.+..+.-.++
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-----------------~~~idr~~E~~i~~~ls~~gl~Pk 109 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-----------------ETESHLVAESVIFTLLSERHLGPK 109 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-----------------CCHHHHHHHHHHHHHHHHTTSSSC
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-----------------chhhHHHHHHHHHHHHHhCCCCCe
Confidence 3568889999999997643 3456777765422 112245689999999876655568
Q ss_pred EEEEEEcCCEEEEEEeccCCCch
Q 008197 174 FYNAFEDDNYVYIAMELCEGGEL 196 (574)
Q Consensus 174 ~~~~~~~~~~~~lv~e~~~gg~L 196 (574)
+++++.+ .+|+||++|.+|
T Consensus 110 ll~~~~~----g~I~efi~g~~l 128 (395)
T d1nw1a_ 110 LYGIFSG----GRLEEYIPSRPL 128 (395)
T ss_dssp EEEEETT----EEEECCCCEEEC
T ss_pred EEEEcCC----ceEEEEeccccC
Confidence 8887753 679999987654
|
| >d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Osteonectin domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.00025 Score=58.43 Aligned_cols=59 Identities=19% Similarity=0.245 Sum_probs=48.4
Q ss_pred ccccccccCC-CCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhhcCCCCcceehhchHHHHh
Q 008197 419 RDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 480 (574)
Q Consensus 419 ~~~F~~~D~d-~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~ 480 (574)
.-.|..+|.| .||.|+..||..+. + ...+.+.-+..+++.+|.|+||.|++.|+...+.
T Consensus 80 ~W~F~~LD~n~~D~~L~~~EL~~l~-~--~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~ 139 (151)
T d1sraa_ 80 HWQFGQLDQHPIDGYLSHTELAPLR-A--PLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHCCTTCSSEECTTTTGGGG-S--TTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred eeehhhcCCCCCCCccCHHHHHHHH-H--hhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence 3449999999 59999999998764 2 2345566789999999999999999999997654
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.70 E-value=0.011 Score=55.81 Aligned_cols=30 Identities=27% Similarity=0.439 Sum_probs=24.8
Q ss_pred CCCEeecCCCCcEEEccCCCCCCeEEEeecccc
Q 008197 230 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 262 (574)
Q Consensus 230 ~~iiHrDlkp~Nill~~~~~~~~vkl~DFG~a~ 262 (574)
.|+||+|+.++||+++. +..+-|+||+.|.
T Consensus 183 ~giIHgDl~~dNvl~~~---~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLG---DELSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEET---TEEEEECCCTTCE
T ss_pred cccccCCcchhhhhccc---ccceeEecccccc
Confidence 37999999999999983 4445799999875
|
| >d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: Calmodulin-like domain: Calcium vector protein species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
Probab=94.58 E-value=0.067 Score=35.63 Aligned_cols=73 Identities=16% Similarity=0.182 Sum_probs=59.5
Q ss_pred ccchHHhhhhccccccccCCCCCCcCHHHHHHHHHhhCCCCccHHHHHHHHHhh-cCCCCc-ceehhchHHHHhhh
Q 008197 409 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDG-LVDFSEFVAATLHV 482 (574)
Q Consensus 409 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~-D~d~dg-~I~f~EF~~~~~~~ 482 (574)
.+.+++..+-..+|+.||.|....-...+-...|.+ +|...+..+.+.++++. .+.+|. .|.-+|++.++...
T Consensus 7 algpeekdecmkifdifdrnaeniapvsdtmdmltk-lgqtytkreteaimkeargpkgdkknigpeewltlcskw 81 (86)
T d1j7qa_ 7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK-LGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW 81 (86)
T ss_dssp CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH-TSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHH-hhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence 455677788889999999999998899999999966 99999999999999886 344443 48999999876543
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.39 E-value=0.054 Score=40.63 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=50.9
Q ss_pred hhhccccccccCCCCCCcCHHHHHHHHHhhCCC-CccHHHHHHHHHhhcCCC----CcceehhchHHHHhh
Q 008197 416 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNT----DGLVDFSEFVAATLH 481 (574)
Q Consensus 416 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~-~~~~~~~~~~~~~~D~d~----dg~I~f~EF~~~~~~ 481 (574)
.++.++|..+-. +.+.++.++|..+|...-+. ..+.+.+..++..+.++. .|.+++++|...+..
T Consensus 8 ~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S 77 (94)
T d1qasa1 8 AEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 77 (94)
T ss_dssp HHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred HHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence 466778888844 44689999999999775554 457888999999997764 367999999987654
|
| >d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: alpha-Actinin species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.20 E-value=0.38 Score=33.36 Aligned_cols=57 Identities=18% Similarity=0.209 Sum_probs=44.7
Q ss_pred HHHHHHHHhcCCCCCCcccHHHHHHhhcccCcHHHHHHHhCC----C-CCCcccHHHHHHHHHh
Q 008197 495 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI----D-KDGRISLSEFRRLLRT 553 (574)
Q Consensus 495 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~D~----d-~dG~i~~~EF~~~~~~ 553 (574)
+.+..+|+.+ .++..+|+.+||++.|... +++-++..|-. + ..|..+|..|...+-+
T Consensus 8 Eqv~~aFr~l-A~~KpyVT~~dL~~~L~pe-qaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g 69 (73)
T d1h8ba_ 8 EQVIASFRIL-ASDKPYILAEELRRELPPD-QAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 69 (73)
T ss_dssp HHHHHHHHHH-TTSCSSBCHHHHHHHSCHH-HHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred HHHHHHHHHH-hCCCCeeCHHHHHhhcCHH-HHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence 3678899999 5678999999999988754 47777777743 2 3678999999988753
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=89.43 E-value=0.24 Score=33.13 Aligned_cols=48 Identities=31% Similarity=0.425 Sum_probs=37.2
Q ss_pred CCCCCCcccHHHHHHhhccc-C---cHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008197 505 DIDRDGFITPEELRMHTGLK-G---SIDPLLEEADIDKDGRISLSEFRRLLR 552 (574)
Q Consensus 505 D~d~~G~I~~~El~~~l~~~-~---~~~~~~~~~D~d~dG~i~~~EF~~~~~ 552 (574)
|.|+||.|+.-++..+..-. + --..-+..+|.|+||.|+..+...+++
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTDDAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCHHHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCChhhhhccccCCCCCCCHHHHHHHHH
Confidence 77999999999998655422 2 134567789999999999999887765
|
| >d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Endo-1,4-beta-xylanase Y species: Clostridium thermocellum [TaxId: 1515]
Probab=89.14 E-value=0.26 Score=33.02 Aligned_cols=52 Identities=19% Similarity=0.312 Sum_probs=35.4
Q ss_pred cCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 463 D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
|.|+||.|+.-+.+.+............ ..|...|.|+||.|+..++..+.+
T Consensus 2 DvN~Dg~vni~D~~~l~~~il~~~~~~~--------~~~~aaDvn~Dg~i~i~D~~~l~~ 53 (59)
T d2cclb1 2 DVNGDGTINSTDLTMLKRSVLRAITLTD--------DAKARADVDKNGSINAADVLLLSR 53 (59)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCCH--------HHHHHHCTTCSSCCSHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCh--------hhhhccccCCCCCCCHHHHHHHHH
Confidence 6788888888888765443322222111 157889999999999999876543
|
| >d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: EF-hand modules in multidomain proteins domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.19 E-value=0.26 Score=36.57 Aligned_cols=59 Identities=17% Similarity=0.157 Sum_probs=45.5
Q ss_pred HHHHHHHhcCCCCCCcccHHHHHHhhcccC--------cHHHHHHHhCCCC----CCcccHHHHHHHHHhcc
Q 008197 496 RSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEEADIDK----DGRISLSEFRRLLRTAS 555 (574)
Q Consensus 496 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~--------~~~~~~~~~D~d~----dG~i~~~EF~~~~~~~~ 555 (574)
++..+|+.+- ++.+.+++++|...|...- .+..+|..+.++. .|.+++++|..+|....
T Consensus 9 ei~~if~~ys-~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~ 79 (94)
T d1qasa1 9 EIDRAFEEAA-GSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 79 (94)
T ss_dssp HHHHHHHHHH-TTSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSST
T ss_pred HHHHHHHHHh-CCCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCcc
Confidence 5677899984 3457899999999887532 1678898887764 37799999999997543
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=86.22 E-value=0.099 Score=36.71 Aligned_cols=50 Identities=24% Similarity=0.376 Sum_probs=36.0
Q ss_pred CCCCCCcccHHHHHHhhccc-Cc-HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 008197 505 DIDRDGFITPEELRMHTGLK-GS-IDPLLEEADIDKDGRISLSEFRRLLRTA 554 (574)
Q Consensus 505 D~d~~G~I~~~El~~~l~~~-~~-~~~~~~~~D~d~dG~i~~~EF~~~~~~~ 554 (574)
|.|+||.|+..++..++... +. -..-...+|.|+||.|+..++..+.+..
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~~~~aDvn~DG~Id~~D~~~l~~~i 59 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGISINTDNADLNEDGRVNSTDLGILKRYI 59 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSCCCGGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCcCCCcceecCCCCCcCHHHHHHHHHHH
Confidence 88999999999987655422 11 0111235899999999999999877644
|
| >d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Type I dockerin domain superfamily: Type I dockerin domain family: Type I dockerin domain domain: Cellulosome endoglucanase SS species: Clostridium thermocellum [TaxId: 1515]
Probab=85.01 E-value=0.37 Score=33.58 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=34.1
Q ss_pred cCCCCcceehhchHHHHhhhhcccccchHHHHHHHHHHHHhcCCCCCCcccHHHHHHhhc
Q 008197 463 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 522 (574)
Q Consensus 463 D~d~dg~I~f~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~ 522 (574)
|.|+||.|+..+...++.......... -+...|.|+||.|+..++..+.+
T Consensus 8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~----------~~~~aDvn~DG~Id~~D~~~l~~ 57 (71)
T d1dava_ 8 DVNDDGKVNSTDAVALKRYVLRSGISI----------NTDNADLNEDGRVNSTDLGILKR 57 (71)
T ss_dssp CSSSSSBSSGGGHHHHHHHHHCSCSCC----------CGGGTCSSSSSSCSSHHHHHHHH
T ss_pred ccCCCCCCcHHHHHHHHHHHcCCCCcC----------CCcceecCCCCCcCHHHHHHHHH
Confidence 678889999888876554332211111 13457999999999999976554
|
| >d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: EF Hand-like superfamily: EF-hand family: p25-alpha domain: Hypothetical protein c32e8.3 species: Caenorhabditis elegans [TaxId: 6239]
Probab=83.18 E-value=1.8 Score=32.26 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=51.3
Q ss_pred hHHhhhhccccccccCCCCCCcCHHHHHHHHHh--hC-CCCccHHHHHHHHHhhcCCCCcceehhchHHHHhhh
Q 008197 412 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DL-PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV 482 (574)
Q Consensus 412 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~--~~-~~~~~~~~~~~~~~~~D~d~dg~I~f~EF~~~~~~~ 482 (574)
..+++...+.|..|-.-..-.++..-|..++.. .+ +...+...++-+|..+-..+ .+|+|++|..++...
T Consensus 4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~l 76 (103)
T d1pula1 4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFV 76 (103)
T ss_dssp HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHH
Confidence 345666667777775322236999999999965 34 35688899999999996554 569999999877644
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