Citrus Sinensis ID: 008224
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 573 | 2.2.26 [Sep-21-2011] | |||||||
| P80065 | 661 | Beta-fructofuranosidase, | N/A | no | 0.949 | 0.822 | 0.611 | 0.0 | |
| P29000 | 636 | Acid beta-fructofuranosid | N/A | no | 0.895 | 0.806 | 0.627 | 0.0 | |
| P93761 | 640 | Acid beta-fructofuranosid | N/A | no | 0.900 | 0.806 | 0.640 | 0.0 | |
| P29001 | 649 | Acid beta-fructofuranosid | N/A | no | 0.924 | 0.816 | 0.584 | 0.0 | |
| Q39041 | 664 | Acid beta-fructofuranosid | yes | no | 0.909 | 0.784 | 0.582 | 0.0 | |
| Q43348 | 648 | Acid beta-fructofuranosid | no | no | 0.888 | 0.785 | 0.583 | 1e-178 | |
| Q43857 | 642 | Acid beta-fructofuranosid | N/A | no | 0.820 | 0.732 | 0.630 | 1e-178 | |
| O24509 | 651 | Acid beta-fructofuranosid | N/A | no | 0.839 | 0.738 | 0.617 | 1e-173 | |
| P49175 | 670 | Beta-fructofuranosidase 1 | N/A | no | 0.808 | 0.691 | 0.630 | 1e-169 | |
| Q9FSV7 | 654 | Sucrose:sucrose 1-fructos | N/A | no | 0.856 | 0.750 | 0.508 | 1e-140 |
| >sp|P80065|INVB_DAUCA Beta-fructofuranosidase, soluble isoenzyme I OS=Daucus carota GN=INV*DC4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/569 (61%), Positives = 421/569 (73%), Gaps = 25/569 (4%)
Query: 1 MDTPYHHL------HAPPYYP-PLLPEEQPS-DAGTPASHRKPFKGFAAILASAIFLLSL 52
MDT YH L HA Y P P PE + D ++R+P K +++L S + L +
Sbjct: 1 MDT-YHFLPSRDLEHASSYTPRPDSPETRHEPDPDRSKTNRRPIKIVSSVLLSTLILSFV 59
Query: 53 VALIIN----QTQKPLPSQN----NIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIK 104
+ L++N Q + S+N + SK P RGV++GVS KS +
Sbjct: 60 IFLLVNPNVQQVVRKKVSKNSNGEDRNKASKSPEMLGPPSRGVSQGVSEKSFRQA--TAE 117
Query: 105 GSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHA 164
SY WTN M +WQRTSFHFQP++NWMNDPNGPLF+ GWYHLFYQYNPDSA+WGNITWGHA
Sbjct: 118 PSYPWTNDMLSWQRTSFHFQPQENWMNDPNGPLFHMGWYHLFYQYNPDSAIWGNITWGHA 177
Query: 165 VSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPA 224
+S DLI+WL+LP AM PDQWYDINGVWTGSAT+LPDG+IVMLYTG TD VQVQNLAYPA
Sbjct: 178 ISRDLINWLHLPFAMQPDQWYDINGVWTGSATVLPDGKIVMLYTGDTDDLVQVQNLAYPA 237
Query: 225 DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284
+ SDPLLLDW+KYP NPV+ PP IG DFRDPTTAW G DGKWR+TIGSK+ KTGISL+
Sbjct: 238 NLSDPLLLDWIKYPDNPVMFPPPGIGSTDFRDPTTAWIGRDGKWRITIGSKVNKTGISLM 297
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344
Y+TTDF TYELLD LHAVPGTGMWECVDFYPV++ GS GLDTS GPG+KHVLK+SLDD
Sbjct: 298 YKTTDFITYELLDNLLHAVPGTGMWECVDFYPVSVTGSNGLDTSVNGPGVKHVLKSSLDD 357
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
+ D+YA+GTY+P NDKWTPDNPE DVGIGL+ DYG+YYASK+FYD K+RR++WGWI E
Sbjct: 358 DRHDYYALGTYDPINDKWTPDNPELDVGIGLRLDYGKYYASKTFYDQDKERRLLWGWIGE 417
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSV 464
TD+ES DL KGWASVQ+IPRTV++D KTG+N++QWPV+E+ESLR S ++V ++PGS+
Sbjct: 418 TDSESADLLKGWASVQSIPRTVVFDKKTGTNILQWPVKEVESLRSRSYEIDDVELKPGSL 477
Query: 465 VPLDIGVATQLDISAEFETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDS 519
VPL I A QLDI A FE + G+ + Y C S GA R +GPFG+LV A D
Sbjct: 478 VPLKISSAAQLDIVASFEVDEEAFKGTYEADASYNCTASEGAAGRGILGPFGILVLADDP 537
Query: 520 LSELTPIFFRSSNTTKG-TNTYFCADETR 547
LSELTP++F + G TYFCAD++R
Sbjct: 538 LSELTPVYFYIAKGVDGNAKTYFCADQSR 566
|
May participate in the regulation of the hexose level in mature tissues and in the utilization of sucrose stored in vacuoles. Daucus carota (taxid: 4039) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 6 |
| >sp|P29000|INVA_SOLLC Acid beta-fructofuranosidase OS=Solanum lycopersicum GN=TIV1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/543 (62%), Positives = 410/543 (75%), Gaps = 30/543 (5%)
Query: 17 LLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKP 76
LLP+ QP D+G HRK K + I S LLS+ I Q P ++ P
Sbjct: 17 LLPD-QP-DSG----HRKSLKIISGIFLSVFLLLSVAFFPILNNQSPDLQIDSRSPA--- 67
Query: 77 TSFSNPEPRGVAEGVSAKSNSHLLRNIKG----SYNWTNAMFTWQRTSFHFQPEKNWMND 132
P RGV++GVS K+ R++ G SY W+NAM +WQRT++HFQP+KNWMND
Sbjct: 68 -----PPSRGVSQGVSDKT----FRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWMND 118
Query: 133 PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWT 192
PNGPL++KGWYHLFYQYNPDSA+WGNITWGHAVS DLIHWLYLP AMVPDQWYDINGVWT
Sbjct: 119 PNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWT 178
Query: 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252
GSATILPDGQI+MLYTG TD VQVQNLAYPA+ SDPLLLDWVK+ GNPVLVPP IG K
Sbjct: 179 GSATILPDGQIMMLYTGDTDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVK 238
Query: 253 DFRDPTTAWAGP-DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311
DFRDPTTAW GP +G+W LTIGSKIGKTG++LVY+T++F +++LLD LHAVPGTGMWEC
Sbjct: 239 DFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSNFTSFKLLDGVLHAVPGTGMWEC 298
Query: 312 VDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDV 371
VDFYPV+ + GLDTS GPG+KHVLKASLDD K DHYAIGTY+ +KWTPDNPE D
Sbjct: 299 VDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPELDC 358
Query: 372 GIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431
GIGL+ DYG+YYASK+FYDP K+RR++WGWI ETD+ES DL+KGWASVQ+IPRTVLYD K
Sbjct: 359 GIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKK 418
Query: 432 TGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAM 491
TG++++QWPVEEIESLR ++V ++PGS+ L + A +LDI A FE + + +
Sbjct: 419 TGTHLLQWPVEEIESLRVGDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGI 478
Query: 492 EE----GYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKG-TNTYFCAD 544
E G+ C SGGA R +GPFG++V A +LSELTP++F S G T+FCAD
Sbjct: 479 IEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSELTPVYFYISKGADGRAETHFCAD 538
Query: 545 ETR 547
+TR
Sbjct: 539 QTR 541
|
Solanum lycopersicum (taxid: 4081) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P93761|INV1_CAPAN Acid beta-fructofuranosidase AIV-18 OS=Capsicum annuum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/529 (64%), Positives = 401/529 (75%), Gaps = 13/529 (2%)
Query: 27 GTPAS-HRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPR 85
G P S HRK K + IL S+ FLL L A +I Q P + N P++ T R
Sbjct: 22 GQPDSGHRKSIKVVSVILLSSFFLLYLAAFVILNNQPP--NLQNKSPSASETLTPATPSR 79
Query: 86 GVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHL 145
GV++GVS K+ + + SY W+NAM WQRT++HFQP+KNWMNDPNGPL++KGWYHL
Sbjct: 80 GVSQGVSEKTFKDVSGTSQVSYTWSNAMLNWQRTAYHFQPQKNWMNDPNGPLYHKGWYHL 139
Query: 146 FYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205
FYQYNPDSA+WGNITWGHAVS DLIHWLYLP AMVPDQWYDINGVWTGSATILPDG I+M
Sbjct: 140 FYQYNPDSAIWGNITWGHAVSTDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGLIMM 199
Query: 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP- 264
LYTG TD VQVQNLAYPA+ SDPLLLDWVKY GNPVLVPP IG KDFRDPTTAW GP
Sbjct: 200 LYTGDTDDYVQVQNLAYPANLSDPLLLDWVKYQGNPVLVPPPGIGVKDFRDPTTAWTGPQ 259
Query: 265 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 324
+G+W LTIGSK+GKTGI+LVY+T++FK LLD LHAVPGTGMWECVDFYPV+ + G
Sbjct: 260 NGQWLLTIGSKVGKTGIALVYETSNFK---LLDGVLHAVPGTGMWECVDFYPVSTLDANG 316
Query: 325 LDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYA 384
LDTS GPGIKHVLKASLDD K DHY IGTY+P +K++PDNP+ D GIGL+ DYGRYYA
Sbjct: 317 LDTSYNGPGIKHVLKASLDDNKQDHYVIGTYDPVKNKFSPDNPDLDCGIGLRLDYGRYYA 376
Query: 385 SKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEI 444
SK+FYDP K+RR++WGWI ETD+ES DL+KGWASVQ+IPRTVL+D KTG++++QWPV EI
Sbjct: 377 SKTFYDPKKQRRVLWGWIGETDSESADLQKGWASVQSIPRTVLFDKKTGTHLLQWPVAEI 436
Query: 445 ESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE---LLGSGAMEEGYGC--SG 499
ESLR +EV ++PGS+ L + A Q DI A FE + L G + GY C SG
Sbjct: 437 ESLRSGDPKVKEVNLQPGSIELLHVDSAAQFDIEASFEVDRVTLEGIIEADVGYNCSTSG 496
Query: 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKG-TNTYFCADETR 547
GA R +GPFG++V A +LSELTP++F S G +FCAD+TR
Sbjct: 497 GAASRGILGPFGVVVIADQTLSELTPVYFYISRGADGRAEAHFCADQTR 545
|
Capsicum annuum (taxid: 4072) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P29001|INVA_VIGRR Acid beta-fructofuranosidase OS=Vigna radiata var. radiata GN=INVA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/554 (58%), Positives = 398/554 (71%), Gaps = 24/554 (4%)
Query: 13 YYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI------INQTQKPLPS 66
++ PLLP S A +S RK +L +FL SLVA + P+
Sbjct: 3 HHKPLLPTS--SHAAPTSSTRKDL---LFVLCGLLFLSSLVAYGGYRASGVPHAHLSSPT 57
Query: 67 ----QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGS---YNWTNAMFTWQRT 119
Q++ PTS P+S P RGV+ GVS KS++ L G+ + W N+M +WQRT
Sbjct: 58 SNHQQDHQSPTSLPSSKWYPVSRGVSSGVSEKSSNLLFAGEGGASEAFPWDNSMLSWQRT 117
Query: 120 SFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM 179
SFHFQPEKNWMNDPNGP++YKGWYH FYQYNP+ AVWG+I WGHAVS D+IHWL+LP+AM
Sbjct: 118 SFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAM 177
Query: 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPG 239
V DQWYD GVWTGSATILP+G+I+MLYTGST++SVQVQNLAYPADPSDPLLLDW+K+ G
Sbjct: 178 VADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHTG 237
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEY 299
NPVLVPP IG KDFRDPTTAW +GKWR+TIGSK+ KTGI+LVY T DFKTYEL +
Sbjct: 238 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGL 297
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
L AVPGTGMWECVDF+PV+ GLDTS G +KHV+K SLDD + D+YAIGTY+
Sbjct: 298 LRAVPGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDDNK 357
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
+TPD+ + DVG+GL++DYG +YASK+FYD K RRI+WGWI E+D+E D+ KGWASV
Sbjct: 358 VLFTPDDVKNDVGVGLRYDYGIFYASKTFYDQNKDRRILWGWIGESDSEYADVTKGWASV 417
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISA 479
Q+IPRTV D KTGSN++QWPV+E+ESLR S F+ + +PGSVV LDI ATQLD+ A
Sbjct: 418 QSIPRTVRLDTKTGSNLLQWPVDEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVA 477
Query: 480 EFETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTT 534
EFE + L + E + C SGGA R A+GPFGLLV A + LSE TP++F
Sbjct: 478 EFEIDTESLEKTAESNEEFTCSSSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGR 537
Query: 535 KGT-NTYFCADETR 547
G T FC+D++R
Sbjct: 538 NGNLRTSFCSDQSR 551
|
Possible role in the continued mobilization of sucrose to sink organs. Vigna radiata var. radiata (taxid: 3916) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q39041|INVA4_ARATH Acid beta-fructofuranosidase 4, vacuolar OS=Arabidopsis thaliana GN=BFRUCT4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/549 (58%), Positives = 389/549 (70%), Gaps = 28/549 (5%)
Query: 18 LPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPT 77
LP P+ R+PFKG A+ +F+ VALI + I T T
Sbjct: 24 LPMADPNQETHGPRRRRPFKGLLAVSFGLLFIAFYVALIATH-DGSRSNDEGIDETETIT 82
Query: 78 SFSNPEPRGVAEGVSAKSNSHLLRNIKG-----SYNWTNAMFTWQRTSFHFQPEKNWMND 132
S R GVS K N L + + G ++ W N+M +WQRT+FHFQPE+NWMND
Sbjct: 83 S------RARLAGVSEKRNDGLWK-LSGDRNTPAFEWNNSMLSWQRTAFHFQPEQNWMND 135
Query: 133 PNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWT 192
PNGPLFYKGWYH FYQYNP++AVWG+I WGHAVS DLIHW++LPIAMV DQWYD NGVWT
Sbjct: 136 PNGPLFYKGWYHFFYQYNPNAAVWGDIVWGHAVSRDLIHWVHLPIAMVADQWYDSNGVWT 195
Query: 193 GSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPK 252
GSAT LPDG IVMLYTGSTDK+VQVQNLAYP DP+DPLLL WVK+PGNPVLVPP I PK
Sbjct: 196 GSATFLPDGSIVMLYTGSTDKAVQVQNLAYPEDPNDPLLLKWVKFPGNPVLVPPPGILPK 255
Query: 253 DFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECV 312
DFRDPTTAW +GKWR+TIGSK+ KTGISLVY T DFKTYE LD LH VP TGMWECV
Sbjct: 256 DFRDPTTAWKTSEGKWRITIGSKLNKTGISLVYDTIDFKTYEKLDTLLHRVPNTGMWECV 315
Query: 313 DFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVG 372
DFYPV+ GLDTS GP +KH++KAS+DDT+ DHYA+GTY +N W PD+P DVG
Sbjct: 316 DFYPVSKTAGNGLDTSVNGPDVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDDPTIDVG 375
Query: 373 I--GLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDN 430
+ L++DYG++YASKSFYD K RR++W WI E+D+E+ D++KGW+S+Q IPRTV+ D
Sbjct: 376 MTASLRYDYGKFYASKSFYDQNKGRRVLWSWIGESDSEASDVQKGWSSLQGIPRTVVLDT 435
Query: 431 KTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFET------E 484
KTG N+VQWPVEEI+SLR +S F ++ V PGSVVP+D+G A QLDI AEFE +
Sbjct: 436 KTGKNLVQWPVEEIKSLRLSSKQF-DLEVGPGSVVPVDVGSAAQLDIEAEFEINKESLDK 494
Query: 485 LLGSG---AMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFR-SSNTTKGTN 538
++G+ A E + C SGG+ R A+GPFG V A +SLSE TP++F +
Sbjct: 495 IIGNASVVAEAEEFSCEKSGGSTVRGALGPFGFSVLATESLSEQTPVYFYVAKGKDSELK 554
Query: 539 TYFCADETR 547
T+FC D +R
Sbjct: 555 TFFCTDTSR 563
|
Possible role in the continued mobilization of sucrose to sink organs. Regulates root elongation. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43348|INVA3_ARATH Acid beta-fructofuranosidase 3, vacuolar OS=Arabidopsis thaliana GN=BFRUCT3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 626 bits (1615), Expect = e-178, Method: Compositional matrix adjust.
Identities = 319/547 (58%), Positives = 384/547 (70%), Gaps = 38/547 (6%)
Query: 21 EQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFS 80
E SD R+P K A+ + + + V LI+ S+ I S+P
Sbjct: 19 ESRSDQIPETRRRRPIKVHLAVYSGLLLIALYVTLIVTHDG----SKAEIATESRPR--- 71
Query: 81 NPEPRGVAEGVSAKSNSHL-LRNIKG---SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGP 136
GVS KSN + + + G ++ W N + +WQRT+FHFQPEKNWMNDPNGP
Sbjct: 72 -------MAGVSEKSNDGVWISSDDGKVEAFPWNNTILSWQRTAFHFQPEKNWMNDPNGP 124
Query: 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196
LFYKGWYH FYQYNP++AVWG+I WGHAVS DLIHWLYLPIAMVPDQWYD NGVWTGSAT
Sbjct: 125 LFYKGWYHFFYQYNPNAAVWGDIVWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSAT 184
Query: 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRD 256
L DG IVMLYTGSTD+ VQVQNLAYP DPSDPLLL WVK+ GNPVLVPP IG KDFRD
Sbjct: 185 FLDDGSIVMLYTGSTDEFVQVQNLAYPEDPSDPLLLKWVKFSGNPVLVPPPGIGAKDFRD 244
Query: 257 PTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316
PTTAW GKWR+TIGSKI +TGISL+Y TTDFKTYE + LH VP TGMWECVDFYP
Sbjct: 245 PTTAWKTSSGKWRITIGSKINRTGISLIYDTTDFKTYEKHETLLHQVPNTGMWECVDFYP 304
Query: 317 VAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGI--G 374
V+ GLDTS GP +KHV+KAS+DDT++DHYAIGTY+ +N W PDNP DVGI G
Sbjct: 305 VSKTQLNGLDTSVNGPDVKHVIKASMDDTRIDHYAIGTYDDSNATWVPDNPSIDVGISTG 364
Query: 375 LKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGS 434
L++DYG+YYASK+FYD K RRI+WGWI E+D+E+ D++KGW+SVQ IPRTV+ D +T
Sbjct: 365 LRYDYGKYYASKTFYDQNKGRRILWGWIGESDSEAADVQKGWSSVQGIPRTVVLDTRTHK 424
Query: 435 NVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE--------LL 486
N+VQWPVEEI+SLR +S F ++ + PG+VVP+D+G ATQLDI AEFE +
Sbjct: 425 NLVQWPVEEIKSLRLSSKKF-DMTIGPGTVVPVDVGSATQLDIEAEFEIKTDDLKLFFDD 483
Query: 487 GSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT----NTY 540
S + + C +GG+ R A+GPFG V A + LSE TP++F TKG NT
Sbjct: 484 DSVEADNKFSCETNGGSTARGALGPFGFSVLADEGLSEQTPVYFY---VTKGKHSKLNTV 540
Query: 541 FCADETR 547
FC D +R
Sbjct: 541 FCTDTSR 547
|
Possible role in the continued mobilization of sucrose to sink organs. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q43857|INVA_VICFA Acid beta-fructofuranosidase OS=Vicia faba GN=VCINV PE=2 SV=1 | Back alignment and function description |
|---|
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 305/484 (63%), Positives = 370/484 (76%), Gaps = 14/484 (2%)
Query: 74 SKPTSFSNPEPRGVAEGVSAKSNSHLLR-NI---KGSYNWTNAMFTWQRTSFHFQPEKNW 129
++PT+ S RGV+ GVS KSN+ LL N+ GS+ W N M +WQRT+FHFQPEKNW
Sbjct: 64 TRPTTLS----RGVSSGVSEKSNTFLLSGNLVGEGGSFPWNNTMLSWQRTAFHFQPEKNW 119
Query: 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDING 189
MNDPNGPL+YKGWYH FYQYNP+ AVWG+I WGHAVS DLIHWL+LP+AMV DQWYD NG
Sbjct: 120 MNDPNGPLYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDSNG 179
Query: 190 VWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249
VWTGSATILPDGQ++MLYTGST++ VQVQNLAYPAD +DPLL+DW+KYP NPVLVPP I
Sbjct: 180 VWTGSATILPDGQVIMLYTGSTNEFVQVQNLAYPADLNDPLLVDWIKYPSNPVLVPPPGI 239
Query: 250 GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMW 309
PKDFRDPTTAW +GKWR+TIGSKI KTG++LVY T DFKTYE D L+AVPGTGMW
Sbjct: 240 LPKDFRDPTTAWLTTEGKWRITIGSKINKTGVALVYDTVDFKTYERKDMLLNAVPGTGMW 299
Query: 310 ECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEE 369
ECVDF+PV++ GLDTS TG +KHV+K SLDD + D+YA+GTY+ K+ D+ E
Sbjct: 300 ECVDFFPVSMKSENGLDTSFTGDEVKHVMKVSLDDDRHDYYALGTYDEKKVKFIADDFEN 359
Query: 370 DVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429
DVGIGL++DYG +YASK+FYD K RR++WGWI E+D+E D+ KGWASVQ+IPR V D
Sbjct: 360 DVGIGLRYDYGIFYASKTFYDQKKDRRVLWGWIGESDSEYADVAKGWASVQSIPRIVKLD 419
Query: 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE---LL 486
KTGSN++QWPV E+ESLR S F+ + V+PG+VV +DI ATQLDI AEFE + L
Sbjct: 420 KKTGSNLLQWPVAEVESLRLRSDEFQNLKVKPGAVVSVDIETATQLDIVAEFEIDKEALE 479
Query: 487 GSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCA 543
+ Y C SGGA R A+GPFGL V A + LSE TP++F G +T FC+
Sbjct: 480 KTAQSNVEYECNTSGGASRRGALGPFGLYVLADNGLSEYTPVYFYVVKGINGKLHTSFCS 539
Query: 544 DETR 547
D++R
Sbjct: 540 DQSR 543
|
Vicia faba (taxid: 3906) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|O24509|INVA_PHAVU Acid beta-fructofuranosidase OS=Phaseolus vulgaris PE=2 SV=1 | Back alignment and function description |
|---|
Score = 608 bits (1569), Expect = e-173, Method: Compositional matrix adjust.
Identities = 304/492 (61%), Positives = 373/492 (75%), Gaps = 11/492 (2%)
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGS---YNWTNAMFTWQRTSFHF 123
Q + PTS P+S + RGV+ GVS KS+S L G+ + W N+M +WQRTSFHF
Sbjct: 62 QEHQSPTSLPSSKWHAVSRGVSSGVSEKSSSMLFSGEGGASEAFPWDNSMLSWQRTSFHF 121
Query: 124 QPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ 183
QPEKNWMNDPNGP++YKGWYH FYQYNP+ AVWG+I WGHAVS D+IHWL+LP+AMV DQ
Sbjct: 122 QPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQ 181
Query: 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243
WYD GVWTGSATILP+G+I+MLYTGST++SVQVQNLAYPADPSDPLL+DW+K+PGNPVL
Sbjct: 182 WYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKHPGNPVL 241
Query: 244 VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV 303
VPP IG KDFRDPTTAW +GKWR+TIGSK+ KTGI+LVY T DFKTYEL + +L AV
Sbjct: 242 VPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTDDFKTYELKNGHLRAV 301
Query: 304 PGTGMWECVDFYPVAINGSVGLDTSAT--GPGIKHVLKASLDDTKVDHYAIGTYNPANDK 361
PGTGMWECVDF+PV+ GLDTS + G +K+V+K SLDD + D+Y IGTY+
Sbjct: 302 PGTGMWECVDFFPVSKKNENGLDTSLSINGAEVKYVMKVSLDDDRHDYYTIGTYDENKVL 361
Query: 362 WTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQT 421
+TPD+ + DVG+GL++DYG +YASK+FYD RRI+WGWI E+D+E D+ KGWASVQ+
Sbjct: 362 FTPDDVKNDVGVGLRYDYGIFYASKTFYDQNMDRRILWGWIGESDSEYADVTKGWASVQS 421
Query: 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEF 481
IPRTV D KTGSN++QWPV E+ESLR S F+ + +PGSVV LDI ATQLD+ AEF
Sbjct: 422 IPRTVRLDKKTGSNLLQWPVAEVESLRLRSDEFKSLKAKPGSVVSLDIETATQLDVVAEF 481
Query: 482 ETE---LLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKG 536
E + L + E + C SGGA R A+GPFGLLV A + LSE TP++F G
Sbjct: 482 EIDAESLQKTAQSNEEFTCSTSGGAAQRGALGPFGLLVLADEGLSEYTPVYFYVIKGRNG 541
Query: 537 T-NTYFCADETR 547
T FC+D++R
Sbjct: 542 NLKTSFCSDQSR 553
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P49175|INV1_MAIZE Beta-fructofuranosidase 1 OS=Zea mays GN=IVR1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 595 bits (1534), Expect = e-169, Method: Compositional matrix adjust.
Identities = 304/482 (63%), Positives = 359/482 (74%), Gaps = 19/482 (3%)
Query: 85 RGVAEGVSAKSNSHLL-RNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWY 143
RGVAEGVS KS + LL ++WTNAM WQRT+FHFQP KNWMNDPNGPL++KGWY
Sbjct: 91 RGVAEGVSEKSTAPLLGSGALQDFSWTNAMLAWQRTAFHFQPPKNWMNDPNGPLYHKGWY 150
Query: 144 HLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQI 203
HLFYQ+NPDSAVWGNITWGHAVS DL+HWL+LP+AMVPD YD NGVW+GSAT LPDG+I
Sbjct: 151 HLFYQWNPDSAVWGNITWGHAVSRDLLHWLHLPLAMVPDHPYDANGVWSGSATRLPDGRI 210
Query: 204 VMLYTGST-DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW- 261
VMLYTGST + S QVQNLA PAD SDPLL +WVK NPVLVPP IGP DFRDPTTA
Sbjct: 211 VMLYTGSTAESSAQVQNLAEPADASDPLLREWVKSDANPVLVPPPGIGPTDFRDPTTACR 270
Query: 262 --AGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
AG D WR+ IGSK G++LVY+T DF Y+ +HAVPGTGMWECVDFYPVA
Sbjct: 271 TPAGNDTAWRVAIGSKDRDHAGLALVYRTEDFVRYDPAPALMHAVPGTGMWECVDFYPVA 330
Query: 319 INGSVG------LDTSAT-GPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDV 371
L+TSA GPG+KHVLKASLDD K D+YAIGTY+PA D WTPD+ E+DV
Sbjct: 331 AGSGAAAGSGDGLETSAAPGPGVKHVLKASLDDDKHDYYAIGTYDPATDTWTPDSAEDDV 390
Query: 372 GIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431
GIGL++DYG+YYASK+FYDP +RR++WGW+ ETD+E D+ KGWASVQ+IPRTVL D K
Sbjct: 391 GIGLRYDYGKYYASKTFYDPVLRRRVLWGWVGETDSERADILKGWASVQSIPRTVLLDTK 450
Query: 432 TGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAM 491
TGSN++QWPV E+E+LR + F+ V ++ GSVVPLD+G ATQLDI A FE + + +
Sbjct: 451 TGSNLLQWPVVEVENLRMSGKSFDGVALDRGSVVPLDVGKATQLDIEAVFEVDASDAAGV 510
Query: 492 EEG---YGC--SGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADE 545
E + C S GA R +GPFGLLV A D LSE T ++F T G+ T+FC DE
Sbjct: 511 TEADVTFNCSTSAGAAGRGLLGPFGLLVLADDDLSEQTAVYFYLLKGTDGSLQTFFCQDE 570
Query: 546 TR 547
R
Sbjct: 571 LR 572
|
Zea mays (taxid: 4577) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9FSV7|SST_FESAR Sucrose:sucrose 1-fructosyltransferase OS=Festuca arundinacea GN=1-SST PE=1 SV=1 | Back alignment and function description |
|---|
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 258/507 (50%), Positives = 331/507 (65%), Gaps = 16/507 (3%)
Query: 52 LVALIINQTQKPLPSQNNIVPTSKPTS-FSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWT 110
+V L+ P+ ++ + P P RG GVS K++ + G + W+
Sbjct: 57 VVGLLAGGRVDRGPAGGDVASAAVPAVPMEIPRSRGKDFGVSEKASGAY--SADGGFPWS 114
Query: 111 NAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI 170
NAM WQRT FHFQPEK++MNDPNGP++Y GWYHLFYQYNP WGNI W HAVS D++
Sbjct: 115 NAMLQWQRTGFHFQPEKHYMNDPNGPVYYGGWYHLFYQYNPKGDSWGNIAWAHAVSKDMV 174
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPL 230
+W +LP+AMVPDQWYD NGV TGS T+LPDGQ+++LYTG+TD QVQ LA PADPSDPL
Sbjct: 175 NWRHLPLAMVPDQWYDSNGVLTGSITVLPDGQVILLYTGNTDTLAQVQCLATPADPSDPL 234
Query: 231 LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG-PDGKWRLTIGSK--IGKTGISLVYQT 287
L +W+K+P NP+L PP IG KDFRDP TAW D WR IGSK G GI L Y+T
Sbjct: 235 LREWIKHPANPILYPPPGIGLKDFRDPLTAWFDHSDNTWRTVIGSKDDDGHAGIILSYKT 294
Query: 288 TDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGS--VGLDTSATGPGIKHVLKASLDD 344
DF YEL+ +H P GTGM+EC+D YPV N S +G D S P + VLK S DD
Sbjct: 295 KDFVNYELMPGNMHRGPDGTGMYECIDLYPVGGNSSEMLGGDDS---PDVLFVLKESSDD 351
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
+ D+YA+G ++ A + WTP + E D+GIGL++D+G+YYASKSFYD K RRIVW +I E
Sbjct: 352 ERHDYYALGRFDAAANIWTPIDQELDLGIGLRYDWGKYYASKSFYDQKKNRRIVWAYIGE 411
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSV 464
TD+E D+ KGWA++ TIPRTV D KT +N++QWPVEE+++LR+NST + V+ GSV
Sbjct: 412 TDSEQADITKGWANLMTIPRTVELDKKTRTNLIQWPVEELDTLRRNSTDLSGITVDAGSV 471
Query: 465 VPLDIGVATQLDISAEFETELLGSGAMEEG---YGCS-GGAIDRSAMGPFGLLVNAHDSL 520
+ L + Q+DI A F+ A+ E Y CS GA R A+GPFGLLV A+
Sbjct: 472 IRLPLHQGAQIDIEASFQLNSSDVDALTEADVSYNCSTSGAAVRGALGPFGLLVLANGRT 531
Query: 521 SELTPIFFRSSNTTKGTNTYFCADETR 547
+ F+ S T+FC DE+R
Sbjct: 532 EQTAVYFYVSKGVDGALQTHFCHDESR 558
|
Transferase involved in fructan biosynthesis that catalyzes the production of 1-kestose (fructose and nystose to a lower extent) from sucrose. Exhibits also some hydrolase activity toward 1-kestose, thus producing fructose and sucrose. A weak fructosyltransferase activity leads to the formation of nystose from 1-kestose. Festuca arundinacea (taxid: 4606) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 9 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 573 | ||||||
| 115548295 | 642 | beta-fructofuranosidase [Citrus sinensis | 0.954 | 0.852 | 0.996 | 0.0 | |
| 19705584 | 588 | vacuolar invertase [Citrus sinensis] | 0.860 | 0.838 | 0.882 | 0.0 | |
| 399138442 | 643 | soluble acid invertase [Litchi chinensis | 0.937 | 0.835 | 0.766 | 0.0 | |
| 384371334 | 639 | vacuolar invertase [Manihot esculenta] | 0.914 | 0.820 | 0.754 | 0.0 | |
| 255539759 | 639 | Beta-fructofuranosidase, soluble isoenzy | 0.924 | 0.829 | 0.751 | 0.0 | |
| 229597364 | 645 | vacuolar invertase [Gossypium hirsutum] | 0.891 | 0.792 | 0.723 | 0.0 | |
| 310722811 | 648 | vacuolar invertase 1 [Gossypium hirsutum | 0.891 | 0.788 | 0.723 | 0.0 | |
| 268526570 | 618 | vacuolar invertase 2 [Gossypium hirsutum | 0.905 | 0.839 | 0.697 | 0.0 | |
| 116744388 | 645 | Soluble acid invertase [Pyrus pyrifolia | 0.940 | 0.835 | 0.675 | 0.0 | |
| 186397271 | 645 | soluble acid invertase [Pyrus pyrifolia] | 0.940 | 0.835 | 0.677 | 0.0 |
| >gi|115548295|dbj|BAF34363.1| beta-fructofuranosidase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/547 (99%), Positives = 545/547 (99%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT
Sbjct: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS
Sbjct: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHA S DLIHWLYLPIAMV
Sbjct: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAASTDLIHWLYLPIAMV 180
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN
Sbjct: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL
Sbjct: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND
Sbjct: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ
Sbjct: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE
Sbjct: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
Query: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 540
FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY
Sbjct: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 540
Query: 541 FCADETR 547
FCADETR
Sbjct: 541 FCADETR 547
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|19705584|gb|AAL27709.3|AF433643_1 vacuolar invertase [Citrus sinensis] | Back alignment and taxonomy information |
|---|
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/547 (88%), Positives = 485/547 (88%), Gaps = 54/547 (9%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDTPYHHLH+PP YPPLLPEEQPSDAG PASHRKPFKGFAAILAS IFLLSLVALIINQT
Sbjct: 1 MDTPYHHLHSPPQYPPLLPEEQPSDAGPPASHRKPFKGFAAILASVIFLLSLVALIINQT 60
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS
Sbjct: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV
Sbjct: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN
Sbjct: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVL+PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL
Sbjct: 241 PVLMPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH GTYNP ND
Sbjct: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHNKTGTYNPEND 360
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ
Sbjct: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
LDI SAE
Sbjct: 421 ----------------------------------------------LDI--------SAE 426
Query: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 540
FETELLGSGA EEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY
Sbjct: 427 FETELLGSGAPEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTY 486
Query: 541 FCADETR 547
FCADETR
Sbjct: 487 FCADETR 493
|
Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138442|gb|AFP23357.1| soluble acid invertase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/548 (76%), Positives = 463/548 (84%), Gaps = 11/548 (2%)
Query: 7 HLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALII-NQTQKPLP 65
HLHAP YY PL E PS G PA+ R+P KGFA ILAS IFLLSLV LII NQ+++PL
Sbjct: 8 HLHAP-YYTPL--PEHPSTGGPPATLRRPLKGFALILASVIFLLSLVGLIIINQSRQPLQ 64
Query: 66 SQNNIV-----PTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
+ + V + P SFS PRGV EGVSAKSN + SYNWTNAMF+WQRTS
Sbjct: 65 NSTSNVNIPSLLSPPPPSFSRRVPRGVEEGVSAKSNPSPFDQ-ESSYNWTNAMFSWQRTS 123
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
FHFQP +NWMNDP+GPL++ GWYHLFYQYNPDSAVWGNITWGHAVS DLIHWLYLPIAMV
Sbjct: 124 FHFQPTRNWMNDPDGPLYHMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIAMV 183
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PDQ YDINGVWTGSAT+LPDGQIVMLYTG T + VQVQNLAYPA+ SDPLLL WVKY GN
Sbjct: 184 PDQPYDINGVWTGSATLLPDGQIVMLYTGDTAELVQVQNLAYPANLSDPLLLHWVKYSGN 243
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300
PVLVPP HI PKDFRDPTT W GPDGKWR+TIGSKI TG SL+Y TTDFKTYELLD L
Sbjct: 244 PVLVPPTHIAPKDFRDPTTGWIGPDGKWRITIGSKINGTGFSLIYHTTDFKTYELLDHVL 303
Query: 301 HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAND 360
HAVPGTGMWECVDFYPVAINGS+GLDTSA GPGIKHVLKASLDDTK+DHYA+GTY+P +D
Sbjct: 304 HAVPGTGMWECVDFYPVAINGSMGLDTSAGGPGIKHVLKASLDDTKLDHYALGTYDPDSD 363
Query: 361 KWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQ 420
WTPDNPEEDVGIGL++D GRYYASK+FYD Y+KRRI+WGWINETDTE DDLEKGWASVQ
Sbjct: 364 TWTPDNPEEDVGIGLRYDNGRYYASKTFYDQYRKRRILWGWINETDTEYDDLEKGWASVQ 423
Query: 421 TIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAE 480
TIPRTVL+DNKTG N+VQWPV+E+ESLRQ S FE+V++EPGS+VPLDIG ATQLDI AE
Sbjct: 424 TIPRTVLFDNKTGINIVQWPVQEVESLRQRSIEFEDVLIEPGSIVPLDIGTATQLDIFAE 483
Query: 481 FETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NT 539
FETELL S EEGY C GGAI+R+ +GPFGLLV A DSLSELTP+FFR +NTT GT +T
Sbjct: 484 FETELLESAGEEEGYSCKGGAINRNKLGPFGLLVIADDSLSELTPVFFRPTNTTNGTLDT 543
Query: 540 YFCADETR 547
YFC DETR
Sbjct: 544 YFCTDETR 551
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|384371334|gb|AFH77956.1| vacuolar invertase [Manihot esculenta] | Back alignment and taxonomy information |
|---|
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/530 (75%), Positives = 451/530 (85%), Gaps = 6/530 (1%)
Query: 22 QPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQN-NIVP-TSKPTSF 79
QPS AG P R+P K F+ AS IFLLSLV LIINQ+Q+PLP+ N N P T K TSF
Sbjct: 20 QPSTAGPPIKLRRPLKVFSVTFASFIFLLSLVTLIINQSQEPLPTPNKNPSPSTPKATSF 79
Query: 80 SNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFY 139
+ EPRGVAEGVSAKSN + SYNWTNAMF WQRT++HFQPE+NWMN P+GPLF+
Sbjct: 80 AKREPRGVAEGVSAKSNPSFFSD-GVSYNWTNAMFYWQRTAYHFQPERNWMNGPDGPLFH 138
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP 199
GWYHLFYQYNPDSAVWGNITWGHAVS DLIHW +LP AMVPDQWYDINGVWTGSAT+LP
Sbjct: 139 MGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWFHLPFAMVPDQWYDINGVWTGSATLLP 198
Query: 200 DGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259
DGQI+MLYTG T SVQVQNLAYPA+ SDPLL+DW+KYPGNPVLVPP I +FRDPTT
Sbjct: 199 DGQIMMLYTGDTIDSVQVQNLAYPANLSDPLLIDWIKYPGNPVLVPPPGIETDEFRDPTT 258
Query: 260 AWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
W GPDGKWR+TIGS++ +T G+SLVYQTT+F TYELL+ +LHAVPGTGMWECVDFYPVA
Sbjct: 259 GWLGPDGKWRITIGSRVNETIGVSLVYQTTNFTTYELLEGFLHAVPGTGMWECVDFYPVA 318
Query: 319 INGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWD 378
INGS+GLDTSA GP KHVLKASLDDTK+DHYA+GTY+P D+WTPDNP+EDVGIGL+ D
Sbjct: 319 INGSLGLDTSANGPDTKHVLKASLDDTKIDHYALGTYDPVTDRWTPDNPKEDVGIGLRVD 378
Query: 379 YGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQ 438
YGRYYASK+FYD KKRRI+WGWINETDTE DDLEKGWASVQTIPR VL+DNKTG+N++Q
Sbjct: 379 YGRYYASKTFYDQQKKRRILWGWINETDTEEDDLEKGWASVQTIPRAVLFDNKTGTNLLQ 438
Query: 439 WPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCS 498
WPVEEIESLR NST FEE+++ PGSVVPLDIGVATQLDI AEFETEL+ +EE Y CS
Sbjct: 439 WPVEEIESLRLNSTDFEEILIGPGSVVPLDIGVATQLDIFAEFETELISDSVVEE-YDCS 497
Query: 499 GGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETR 547
GGA+DRS +GPFG+LV A +LSELTP+FFR N+T GT TYFCADETR
Sbjct: 498 GGAVDRSPLGPFGILVIADQTLSELTPVFFRPVNSTDGTLKTYFCADETR 547
|
Source: Manihot esculenta Species: Manihot esculenta Genus: Manihot Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255539759|ref|XP_002510944.1| Beta-fructofuranosidase, soluble isoenzyme I precursor, putative [Ricinus communis] gi|223550059|gb|EEF51546.1| Beta-fructofuranosidase, soluble isoenzyme I precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/543 (75%), Positives = 455/543 (83%), Gaps = 13/543 (2%)
Query: 9 HAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPSQN 68
HAP PLL EQPS G R+P K F AS IFLLSLV LI+NQ+Q PLP+ N
Sbjct: 11 HAP--CTPLL--EQPSLLGPSTKLRRPLKVFTVTFASLIFLLSLVTLIMNQSQGPLPTPN 66
Query: 69 -NIVP-TSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPE 126
N P T K TSFS PRGVAEGVSAKSN N SYNWTNAM +WQRT++HFQPE
Sbjct: 67 KNRSPSTPKSTSFSEHVPRGVAEGVSAKSNPSFFSN-GVSYNWTNAMLSWQRTAYHFQPE 125
Query: 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD 186
KNWMN GPLFY GWYHLFYQYNPDSAVWGNITWGHAVS DLIHWLYLP+AMVPD+WYD
Sbjct: 126 KNWMN---GPLFYMGWYHLFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPMAMVPDKWYD 182
Query: 187 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP 246
INGVWTGSAT+LPDGQIVMLYTG T+ SVQVQNLAYPA+ SDPLL+DW+KYPGNPVLVPP
Sbjct: 183 INGVWTGSATLLPDGQIVMLYTGDTNASVQVQNLAYPANLSDPLLIDWIKYPGNPVLVPP 242
Query: 247 RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYLHAVPG 305
I +FRDPTTAW GPDG WR+T+GS++ +T GISLVYQTT+F TYELLD LHAVPG
Sbjct: 243 PGIETDEFRDPTTAWMGPDGTWRITLGSRMNETVGISLVYQTTNFTTYELLDGLLHAVPG 302
Query: 306 TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPD 365
TGMWECVDFYPVAINGS GLDTS GPG+KHVLKASLD+TK+D+YA+GTY+P DKWTPD
Sbjct: 303 TGMWECVDFYPVAINGSKGLDTSVNGPGVKHVLKASLDNTKLDYYALGTYDPVTDKWTPD 362
Query: 366 NPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRT 425
NPEEDVGIGL+ DYGRYYASKSFYD YK+RRI+WGWINETDTE DDL+KGWASVQTIPR
Sbjct: 363 NPEEDVGIGLRVDYGRYYASKSFYDQYKQRRILWGWINETDTEQDDLQKGWASVQTIPRN 422
Query: 426 VLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETEL 485
VL+DNKTG+N++QWPVEEIESLR NST F+E+V+ PGSVVPL+IG ATQLDI AEFETEL
Sbjct: 423 VLFDNKTGANLLQWPVEEIESLRVNSTDFQEIVIAPGSVVPLEIGTATQLDIFAEFETEL 482
Query: 486 LGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCAD 544
+ + EE YGCSGGA+DRS++GPFGLLV A +SLSELTP+FFR N+T T TYFCAD
Sbjct: 483 ISESSTEE-YGCSGGAVDRSSLGPFGLLVLADESLSELTPVFFRPVNSTDDTLKTYFCAD 541
Query: 545 ETR 547
ETR
Sbjct: 542 ETR 544
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|229597364|gb|ACQ82802.1| vacuolar invertase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/517 (72%), Positives = 436/517 (84%), Gaps = 6/517 (1%)
Query: 34 KPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSA 93
+P KGFA I S +FLLSLV LI+NQ+ +PL S + V + S + +PRG+AEGVSA
Sbjct: 28 RPLKGFAVIFGSVVFLLSLVILIVNQSPEPLASNPSSVTEAGSYSMA-AQPRGIAEGVSA 86
Query: 94 KSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDS 153
KSN L + +NWTNAMF WQRT++HFQP+KNWMNDP+GPL++KGWYHLFYQYNPDS
Sbjct: 87 KSNPSLFDKV--GFNWTNAMFYWQRTAYHFQPQKNWMNDPDGPLYHKGWYHLFYQYNPDS 144
Query: 154 AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213
A+WGNITWGHAVS DLIHW YLP+AMVPDQWYDING WTGSAT+LPDG+IVMLYTGST++
Sbjct: 145 AIWGNITWGHAVSKDLIHWFYLPLAMVPDQWYDINGCWTGSATLLPDGRIVMLYTGSTNE 204
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
SVQVQNLAYPA+ SDPLLL W+KYPGNPV+VPP I +FRDPTTAW GPDG WR+T+G
Sbjct: 205 SVQVQNLAYPANLSDPLLLQWLKYPGNPVVVPPTGIEDNEFRDPTTAWLGPDGSWRITVG 264
Query: 274 SKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP 332
++ T G +LV+QTT+F Y+LLD LHAVPGTGMWECVDFYPVAINGSVGLDT+A GP
Sbjct: 265 TRFNTTIGTALVFQTTNFSDYQLLDGVLHAVPGTGMWECVDFYPVAINGSVGLDTTALGP 324
Query: 333 GIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPY 392
GIKHVLKASLDDTKVDHYAIGTY+ DKWTPDNPEEDVGIGLK DYGRYYASK+F+D
Sbjct: 325 GIKHVLKASLDDTKVDHYAIGTYDMITDKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQS 384
Query: 393 KKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
K+RRI++GW+NETDTE+DDLEKGWAS+QTIPR+VLYDNKTG++++QWPVEE+ESLR N+T
Sbjct: 385 KQRRILYGWVNETDTEADDLEKGWASIQTIPRSVLYDNKTGTHLLQWPVEEVESLRLNAT 444
Query: 453 VFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAME-EGYGCSGGAIDRSAMGPFG 511
VF++VVVE GSVVPLDIG ATQLDI AEFE E L S + E E C GA+DR+ GPFG
Sbjct: 445 VFKDVVVEAGSVVPLDIGTATQLDILAEFEIETLVSNSTEDEVSDCGDGAVDRNTYGPFG 504
Query: 512 LLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETR 547
+LV A DSLSELTPI+FR N + G+ TYFCADETR
Sbjct: 505 VLVIADDSLSELTPIYFRPLNISDGSLETYFCADETR 541
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|310722811|gb|ADP08983.1| vacuolar invertase 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/517 (72%), Positives = 436/517 (84%), Gaps = 6/517 (1%)
Query: 34 KPFKGFAAILASAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSA 93
+P KGFA I+ S +FLLSLV LI+NQ+ +PL S + V + S + +PRG+AEGVSA
Sbjct: 31 RPLKGFAVIIGSVVFLLSLVTLIVNQSPEPLASNPSSVTEAGSYSMA-AQPRGIAEGVSA 89
Query: 94 KSNSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDS 153
KSN L + +NWTNAMF WQRT++HFQP+KNWMNDP+GPL++KGWYHLFYQYNPDS
Sbjct: 90 KSNPSLFDKV--GFNWTNAMFYWQRTAYHFQPQKNWMNDPDGPLYHKGWYHLFYQYNPDS 147
Query: 154 AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213
A+WGNITWGHAVS DLIHW YLP+AMVPDQWYDING WTGSAT+LPDG+IVMLYTGST+
Sbjct: 148 AIWGNITWGHAVSTDLIHWFYLPLAMVPDQWYDINGCWTGSATLLPDGRIVMLYTGSTND 207
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG 273
SVQVQNLAYPA+ SDPLLL W+KYPGNPV+VPP I ++FRDPTTAW GPDG WR+ +G
Sbjct: 208 SVQVQNLAYPANLSDPLLLQWLKYPGNPVVVPPTGIEDEEFRDPTTAWLGPDGSWRIVVG 267
Query: 274 SKIGKT-GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP 332
++ T G +LV+QTT+F YELLD LHAVPGTGMWECVDFYPVAINGSVGLDT+A GP
Sbjct: 268 TRFNTTIGTALVFQTTNFSDYELLDGVLHAVPGTGMWECVDFYPVAINGSVGLDTTALGP 327
Query: 333 GIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPY 392
GIKHVLKASLDDTKVDHYAIGTY+ DKWTPDNPEEDVGIGLK DYGRYYASK+F+D
Sbjct: 328 GIKHVLKASLDDTKVDHYAIGTYDMITDKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQS 387
Query: 393 KKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNST 452
K+RRI++GW+NETD+E+DDLEKGWAS+QTIPR+VLYDNKTG++++QWPVEE+ESLR N+T
Sbjct: 388 KQRRILYGWVNETDSEADDLEKGWASIQTIPRSVLYDNKTGTHLLQWPVEEVESLRLNAT 447
Query: 453 VFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAME-EGYGCSGGAIDRSAMGPFG 511
VF++VVVE GSVVPLDIG ATQLDI AEFE E L + E E C GA+DRS GPFG
Sbjct: 448 VFKDVVVEAGSVVPLDIGTATQLDILAEFEIETLVLNSTEDEVSDCGDGAVDRSTYGPFG 507
Query: 512 LLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETR 547
+LV A DSLSELTPI+FR NT+ G+ TYFCADETR
Sbjct: 508 VLVIADDSLSELTPIYFRPLNTSDGSLETYFCADETR 544
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|268526570|gb|ACZ05614.1| vacuolar invertase 2 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/549 (69%), Positives = 437/549 (79%), Gaps = 30/549 (5%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
M+ Y PP + PLL D +P + R FAAI A + LL L+ALIINQ
Sbjct: 1 MEASYDPEQNPPLHAPLL------DRSSPRTRR-----FAAIFACLVSLLLLLALIINQA 49
Query: 61 QKPLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTS 120
Q+P F +PRGVAEGVSAKSN LL + +NWTNAMF+WQR++
Sbjct: 50 QQP---------------FEKVQPRGVAEGVSAKSNPSLLNQVP--FNWTNAMFSWQRSA 92
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+HFQP+KNWMNDPNGPL++KGWYHLFYQYNP SA+WGNITWGHAVS DLIHWLYLP+A+V
Sbjct: 93 YHFQPQKNWMNDPNGPLYHKGWYHLFYQYNPYSAIWGNITWGHAVSRDLIHWLYLPLALV 152
Query: 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN 240
PD WYDI GVWTGSATIL DGQI+MLYTG T++SVQVQNLAYPA+ SDPLLL W+KYPGN
Sbjct: 153 PDHWYDIKGVWTGSATILADGQIIMLYTGETNESVQVQNLAYPANVSDPLLLHWLKYPGN 212
Query: 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEY 299
PV+VPP + P DFRDPTTAW GPDG WRLT+GSK T GISLVY TT+F+ YELLD
Sbjct: 213 PVMVPPPGVKPDDFRDPTTAWLGPDGTWRLTMGSKFDTTIGISLVYHTTNFRDYELLDGV 272
Query: 300 LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPAN 359
LHAVPGTGMWECVDFYPVAINGSV LDTS+ GPGIKHVLKASLD+TKVDHYAIGTY+P
Sbjct: 273 LHAVPGTGMWECVDFYPVAINGSVALDTSSLGPGIKHVLKASLDNTKVDHYAIGTYDPIT 332
Query: 360 DKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASV 419
DKWTPDNPEEDVGIGLK DYGRYYASK+F+D +K+RR++WGWINETDTE+ DL+KGWAS+
Sbjct: 333 DKWTPDNPEEDVGIGLKVDYGRYYASKTFFDQHKQRRVLWGWINETDTETADLKKGWASL 392
Query: 420 QTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISA 479
QTIPRTVLYDNKTG+N++QWPVEE+ESLR NST+F+EV+VEPGSVVPLDIG TQLDI A
Sbjct: 393 QTIPRTVLYDNKTGTNLLQWPVEEVESLRLNSTMFKEVLVEPGSVVPLDIGTTTQLDILA 452
Query: 480 EFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-N 538
EFE E L E C GA+DRS GPFGLLV A SLSELTPI+FR N + G+
Sbjct: 453 EFEIEPLIPSTTNEIDNCGDGAVDRSTYGPFGLLVIADASLSELTPIYFRPLNASDGSLK 512
Query: 539 TYFCADETR 547
TYFC+DETR
Sbjct: 513 TYFCSDETR 521
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116744388|dbj|BAF35858.1| Soluble acid invertase [Pyrus pyrifolia var. culta] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/558 (67%), Positives = 437/558 (78%), Gaps = 19/558 (3%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDT + +AP LP E PS A P +HR+PFKGFA I +S IFLLSLV L+INQ
Sbjct: 1 MDTTNNTSYAP------LPGEDPSAAVPPPTHRRPFKGFAVIFSSVIFLLSLVTLVINQG 54
Query: 61 Q----KPLPSQNNIVPTSKPTSFSNPE-----PRGVAEGVSAKSNSHLLRNIKGSYNWTN 111
K +P Q + +P S S+ PRG EGVSAKS H + SYNWTN
Sbjct: 55 PGSPPKTVPEQPDHHHQYRPASTSSETRSFSVPRGKLEGVSAKSYPHFSED--ASYNWTN 112
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH 171
AMF+WQRT+FHFQPEKNW+NDPNGPLF+KGWYHLFYQYNPDSAVWGNITWGHAVS D+IH
Sbjct: 113 AMFSWQRTAFHFQPEKNWINDPNGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDMIH 172
Query: 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL 231
WLYLP+AMVPD+W+D NGVWTGSAT+LPDGQI+MLYTGST++SVQVQNLAYPA+ SDPLL
Sbjct: 173 WLYLPLAMVPDRWFDANGVWTGSATLLPDGQIIMLYTGSTNESVQVQNLAYPANLSDPLL 232
Query: 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 291
LDWVKY GNP+L PP IG DFRDPTTAW GPDGKWR+TIGSK TGIS+VY T DF
Sbjct: 233 LDWVKYEGNPILTPPSGIGSTDFRDPTTAWIGPDGKWRITIGSKFNTTGISMVYTTNDFI 292
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
YEL + LH VPGTGMWECVDFYPVAINGS GLDTS IKHVLKASLDDTK+DHYA
Sbjct: 293 NYELHNGVLHEVPGTGMWECVDFYPVAINGSKGLDTSVNSGRIKHVLKASLDDTKLDHYA 352
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDD 411
IGTY N+ W PD+P DVGIGL++DYGRYYASK+FYD K RRI+ GW+NETDTE+DD
Sbjct: 353 IGTYFIENETWVPDDPTIDVGIGLRYDYGRYYASKTFYDQNKDRRILLGWVNETDTETDD 412
Query: 412 LEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGV 471
L+K WAS+ TIP+TVL+D+KTG+N++QWPVEEIE LR NST F +V+VE G++VPLDIG
Sbjct: 413 LKKHWASLHTIPKTVLFDSKTGTNLLQWPVEEIEDLRLNSTEFTDVLVEAGTIVPLDIGT 472
Query: 472 ATQLDISAEFETELLGSGAMEEG-YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRS 530
ATQLDIS +F+ E L + G GC GA+DRS GPFG+LV A +SLSELTP++FR
Sbjct: 473 ATQLDISVDFKIESLDTEESVNGSSGCGDGAVDRSTFGPFGILVIADESLSELTPVYFRV 532
Query: 531 SNTTKG-TNTYFCADETR 547
+N+T G TYFCADE+R
Sbjct: 533 TNSTDGDVTTYFCADESR 550
|
Source: Pyrus pyrifolia var. culta Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186397271|dbj|BAG30919.1| soluble acid invertase [Pyrus pyrifolia] | Back alignment and taxonomy information |
|---|
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/558 (67%), Positives = 436/558 (78%), Gaps = 19/558 (3%)
Query: 1 MDTPYHHLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQT 60
MDT + +AP LP E PS A P +HR+PFKGFA I S IFLLSLV L+INQ
Sbjct: 1 MDTTNNTSYAP------LPGEDPSAAVPPPTHRRPFKGFAVIFPSVIFLLSLVTLVINQG 54
Query: 61 Q----KPLPSQNNIVPTSKPTSFSNPE-----PRGVAEGVSAKSNSHLLRNIKGSYNWTN 111
K +P Q + +P S S+ PRG EGVSAKS H + SYNWTN
Sbjct: 55 PGSPPKTVPEQPDHHHQYRPASTSSETRSFSVPRGKLEGVSAKSYPHFSED--ASYNWTN 112
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH 171
AMF+WQRT+FHFQPEKNW+NDPNGPLF+KGWYHLFYQYNPDSAVWGNITWGHAVS D+IH
Sbjct: 113 AMFSWQRTAFHFQPEKNWINDPNGPLFHKGWYHLFYQYNPDSAVWGNITWGHAVSTDMIH 172
Query: 172 WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLL 231
WLYLP+AMVPD+W+D NGVWTGSAT+LPDGQI+MLYTGST++SVQVQNLAYPA+ SDPLL
Sbjct: 173 WLYLPLAMVPDRWFDANGVWTGSATLLPDGQIIMLYTGSTNESVQVQNLAYPANLSDPLL 232
Query: 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFK 291
LDWVKY GNP+L PP IG DFRDPTTAW GPDGKWR+TIGSK TGIS+VY T DF
Sbjct: 233 LDWVKYEGNPILTPPSGIGSTDFRDPTTAWIGPDGKWRITIGSKFNTTGISMVYTTNDFI 292
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
YEL + LH VPGTGMWECVDFYPVAINGS GLDTS IKHVLKASLDDTK+DHYA
Sbjct: 293 NYELHNGVLHEVPGTGMWECVDFYPVAINGSKGLDTSVNSGRIKHVLKASLDDTKLDHYA 352
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDD 411
IGTY N+ W PD+P DVGIGL++DYGRYYASK+FYD K RRI+ GW+NETDTE+DD
Sbjct: 353 IGTYFIENETWVPDDPTIDVGIGLRYDYGRYYASKTFYDQNKDRRILLGWVNETDTETDD 412
Query: 412 LEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGV 471
L+K WAS+ TIPRTVL+D+KTG+N++QWPVEEIE LR NST F +V+VE G++VPLDIG
Sbjct: 413 LKKHWASLHTIPRTVLFDSKTGTNLLQWPVEEIEDLRLNSTEFTDVLVEAGTIVPLDIGT 472
Query: 472 ATQLDISAEFETELLGSGAMEEG-YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRS 530
ATQLDIS +F+ E L + G GC GA+DRS GPFG+LV A +SLSELTP++FR
Sbjct: 473 ATQLDISVDFKIESLDTEESVNGSSGCGDGAVDRSTFGPFGILVIADESLSELTPVYFRV 532
Query: 531 SNTTKG-TNTYFCADETR 547
+N+T G TYFCADE+R
Sbjct: 533 TNSTDGDVTTYFCADESR 550
|
Source: Pyrus pyrifolia Species: Pyrus pyrifolia Genus: Pyrus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P93761 | INV1_CAPAN | 3, ., 2, ., 1, ., 2, 6 | 0.6408 | 0.9005 | 0.8062 | N/A | no |
| P29000 | INVA_SOLLC | 3, ., 2, ., 1, ., 2, 6 | 0.6279 | 0.8952 | 0.8066 | N/A | no |
| P80065 | INVB_DAUCA | 3, ., 2, ., 1, ., 2, 6 | 0.6115 | 0.9493 | 0.8229 | N/A | no |
| Q39041 | INVA4_ARATH | 3, ., 2, ., 1, ., 2, 6 | 0.5828 | 0.9092 | 0.7846 | yes | no |
| P29001 | INVA_VIGRR | 3, ., 2, ., 1, ., 2, 6 | 0.5848 | 0.9249 | 0.8166 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XV2841 | hypothetical protein (528 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 573 | |||
| smart00640 | 437 | smart00640, Glyco_32, Glycosyl hydrolases family 3 | 1e-170 | |
| pfam00251 | 305 | pfam00251, Glyco_hydro_32N, Glycosyl hydrolases fa | 1e-153 | |
| cd08996 | 298 | cd08996, GH32_B_Fructosidase, Glycosyl hydrolase f | 4e-96 | |
| COG1621 | 486 | COG1621, SacC, Beta-fructosidases (levanase/invert | 1e-69 | |
| TIGR01322 | 445 | TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | 1e-47 | |
| pfam11837 | 106 | pfam11837, DUF3357, Domain of unknown function (DU | 4e-32 | |
| cd08772 | 286 | cd08772, GH43_62_32_68, Glycosyl hydrolase familie | 6e-30 | |
| cd08979 | 276 | cd08979, GH_J, Glycosyl hydrolase families 32 and | 3e-17 | |
| cd08995 | 280 | cd08995, GH32_Aec43_like, Glycosyl hydrolase famil | 6e-16 |
| >gnl|CDD|214757 smart00640, Glyco_32, Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Score = 490 bits (1263), Expect = e-170
Identities = 195/435 (44%), Positives = 252/435 (57%), Gaps = 50/435 (11%)
Query: 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVP 181
HFQP K WMNDPNG ++YKG YHLFYQYNP AVWGNI WGHAVS DL+HW +LP+A+ P
Sbjct: 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGAVWGNIHWGHAVSKDLVHWTHLPVALAP 60
Query: 182 DQWYDINGVWTGSATILPDGQIVMLYTGST--DKSVQVQNLAYPADPSDPLLLDWVKYPG 239
D+WYD NGV++GSA I P + +LYTG+ D +VQVQ AY SD L W KY G
Sbjct: 61 DEWYDSNGVFSGSAVIDPGN-LSLLYTGNVAIDTNVQVQRQAYQCAASDDLGGTWTKYDG 119
Query: 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIG-SKIGKTGISLVYQTTDFKTYELLDE 298
NPVL PP G + FRDP W D KW + IG S K GI+L+Y++TD K + LL E
Sbjct: 120 NPVLTPPPGGGTEHFRDPKVFWYDGD-KWYMVIGASDEDKRGIALLYRSTDLKNWTLLSE 178
Query: 299 YLHAVPG--TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+LH++ G GMWEC D +P+ G KHVLK S ++Y +G ++
Sbjct: 179 FLHSLLGDTGGMWECPDLFPL----------PGEGDTSKHVLKVSPQGGSGNYYFVGYFD 228
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLE-K 414
+D +TPD+P D G GL+ DYG +YAS++FYDP RRI+ GW+ D+ +DD+ K
Sbjct: 229 G-DDTFTPDDP-VDTGHGLRLDYGFDFYASQTFYDPDGNRRILIGWMGNWDSYADDVPTK 286
Query: 415 GWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQ 474
GWA ++PR + D TG ++QWPVEE+ESLR N + ++ GSV L A+
Sbjct: 287 GWAGALSLPRELTLD-LTGGKLLQWPVEELESLR-NKKELLNLTLKNGSVTELLGLTASG 344
Query: 475 --LDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSN 532
+I FE +D GPFGLLV A LSE T +++ SN
Sbjct: 345 DSYEIELSFE-------------------VDSGTAGPFGLLVRASKDLSEQTAVYYDVSN 385
Query: 533 TTKGTNTYFCADETR 547
T C D
Sbjct: 386 GT------LCLDRRS 394
|
Length = 437 |
| >gnl|CDD|215819 pfam00251, Glyco_hydro_32N, Glycosyl hydrolases family 32 N-terminal domain | Back alignment and domain information |
|---|
Score = 442 bits (1138), Expect = e-153
Identities = 164/327 (50%), Positives = 214/327 (65%), Gaps = 30/327 (9%)
Query: 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVP 181
HFQP K WMNDPNG ++YKG YHLFYQYNP AVWGN WGHAVS DL+HW +LP+A+ P
Sbjct: 1 HFQPPKGWMNDPNGLVYYKGEYHLFYQYNPFGAVWGNKHWGHAVSKDLVHWEHLPVALAP 60
Query: 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNP 241
D+WYD NG ++GSA +LPD +V+LYTG+TD+S QVQ LAY AD W KYPGNP
Sbjct: 61 DEWYDSNGCFSGSAVVLPD-NLVLLYTGNTDRSTQVQCLAYSADDG----RTWTKYPGNP 115
Query: 242 VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDFKTYELLDEYL 300
V++ P K FRDP AW PDGKW + +G++ K G +L+Y++ D K +ELL E L
Sbjct: 116 VIINPPPGYTKHFRDPKVAWYEPDGKWYMVLGAQDNDKRGKALLYRSKDLKNWELLGELL 175
Query: 301 HAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD---DTKVDHYAIGTYN 356
H+VP G GMWEC D +PV D GP +KHVLK S + D+Y IGT++
Sbjct: 176 HSVPDGGGMWECPDLFPV--------DGKDNGP-VKHVLKFSPQGYQNGYQDYYFIGTFD 226
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDL--E 413
D +TP + + DYG +YAS++FYDP +RRI+ GW+ E D+E+DD+
Sbjct: 227 ADGDTFTPPDEQR-------LDYGFDFYASQTFYDPDGRRRILIGWMGEWDSEADDVPTT 279
Query: 414 KGWASVQTIPRTVLYDNKTGSNVVQWP 440
KGWA +IPR + ++ G ++QWP
Sbjct: 280 KGWAGALSIPRELTLKDE-GGKLLQWP 305
|
This domain corresponds to the N-terminal domain of glycosyl hydrolase family 32 which forms a five bladed beta propeller structure. Length = 305 |
| >gnl|CDD|185737 cd08996, GH32_B_Fructosidase, Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Score = 294 bits (756), Expect = 4e-96
Identities = 122/328 (37%), Positives = 164/328 (50%), Gaps = 42/328 (12%)
Query: 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDI 187
WMNDPNG +++ G YHLFYQYNP VWGN+ WGHA S DL+HW +LP+A+ PD YD
Sbjct: 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDS 60
Query: 188 NGVWTGSATILPDGQIVMLYTGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244
G ++GSA + +G++V+ YTG+ Q Q LAY S + KY GNPV+
Sbjct: 61 GGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAY----STDDGRTFTKYEGNPVIP 116
Query: 245 PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELLDEYL-HA 302
PP FRDP W DGKW + +G+ TG L+Y++ D K +E L E L
Sbjct: 117 PP-DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRILLYRSDDLKNWEYLGELLTSL 173
Query: 303 VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH------YAIGTYN 356
MWEC D +P+ + G K VL S + + Y +G ++
Sbjct: 174 GDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDFD 220
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415
+ E DYG +YA ++F DP RRI+ GW+ D E E G
Sbjct: 221 GTTFTFDHTEFGE-------LDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDG 272
Query: 416 WASVQTIPRTVLYDNKTGSNVVQWPVEE 443
WA T+PR + K G + Q PV E
Sbjct: 273 WAGCLTLPRELSL--KDGGRLYQRPVRE 298
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 298 |
| >gnl|CDD|224536 COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 232 bits (593), Expect = 1e-69
Identities = 122/382 (31%), Positives = 186/382 (48%), Gaps = 45/382 (11%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P W+NDPNG +++ G YHLFYQYNP A G WGHAVS DL+HW +LPI
Sbjct: 29 RPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPI 88
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS----VQVQNLAYPADPSDPLLLD 233
A+ PD YD +G ++GSA ++ DG + + YTG+ S Q Q +AY D
Sbjct: 89 ALAPDDDYDSHGCYSGSA-VVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSED-----GGT 142
Query: 234 WVKYPGNPVL-VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFK 291
+ KY GNP++ P + FRDP W GKW + +G++ G L+Y++ D K
Sbjct: 143 FEKYSGNPIIDQPEGYT--PHFRDPKVVW-DEGGKWWMMLGAQGEDLKGTILLYESDDLK 199
Query: 292 TYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDH- 349
++ E+ G G MWEC D + + +G L G I + +
Sbjct: 200 NWQFTGEFGLEQGGLGYMWECPDLFEL--DGEDVLLFWPQGLSING-----GEYDNIYQS 252
Query: 350 -YAIGTYNPANDKWTPDNPEEDVGIGLKW-DYGR-YYASKSFYDPYKKRRIVWGWIN--- 403
Y +G ++ + D+ + + D+G +YA ++F DP RRI+ GW+
Sbjct: 253 GYFVGDFDGKE--FKLDDGQ------FRELDFGFDFYAPQTFLDPD-GRRILIGWMGNWD 303
Query: 404 -ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPG 462
+ + D +GW T+PR + ++ + Q PV E+ESLR+ +
Sbjct: 304 YTNNYPTID--EGWRGAMTLPRELTLEDGK---LYQTPVRELESLRKPEEAAHNTTLSGN 358
Query: 463 SVVPLDIGVATQLDISAEFETE 484
S + L G A +LD+ +
Sbjct: 359 SKLELPSGDAYELDLDLIWTDA 380
|
Length = 486 |
| >gnl|CDD|233357 TIGR01322, scrB_fam, sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 1e-47
Identities = 124/416 (29%), Positives = 186/416 (44%), Gaps = 57/416 (13%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +FH QP+ +NDPNG +++KG YHLFYQ+ P V G +WGH S DL+HW +
Sbjct: 14 RPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGV 73
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTG----STDKSVQVQNLAYPADPSDPLLLD 233
A+ PD YD +G ++GSA + +GQ+ ++YTG S Q LA D
Sbjct: 74 ALAPDDPYDSHGCYSGSA-VDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGH----- 127
Query: 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKT 292
+ G V+ P FRDP W +G W + IG++ + G L+Y++ D K
Sbjct: 128 -FEKFGIVVIELPPAGYTAHFRDPKV-WK-HNGHWYMVIGAQTETEKGSILLYRSKDLKN 184
Query: 293 YELLDEYL-HAVPGTG----MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK- 346
+ + E L G MWEC D + ++G L S G L AS D +
Sbjct: 185 WTFVGEILGDGQNGLDDRGYMWECPDLFS--LDGQDVLLFSPQG------LDASGYDYQN 236
Query: 347 --VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWIN 403
+ Y +G + ++T + + DYG +YA ++F P RRI+ W+
Sbjct: 237 IYQNGYIVGQLDYEAPEFT---HGTEF---HELDYGFDFYAPQTFLAP-DGRRILVAWMG 289
Query: 404 ETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPG 462
+ + GWA T+PR + L D K +VQ P+ E+++LR E + V
Sbjct: 290 LPEIDYPTDRDGWAHCMTLPRELTLKDGK----LVQTPLRELKALRTE----EHINVFGD 341
Query: 463 SVVPLDIGVAT---QLDISAE--FETELLGSGAMEEG---YGCSGGAI--DRSAMG 508
L LD+ + FE L + EE G + DR + G
Sbjct: 342 QEHTLPGLNGEFELILDLEKDSAFELGLALTNKGEETLLTIDADEGKVTLDRRSSG 397
|
[Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 445 |
| >gnl|CDD|221256 pfam11837, DUF3357, Domain of unknown function (DUF3357) | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 4e-32
Identities = 44/108 (40%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 7 HLHAPPYYPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALIINQTQKPLPS 66
P Y PL P+ S G P R+P KG A+L+S +FLLSLVAL+I Q P
Sbjct: 1 LETLPYSYTPL-PDGDESAGGPPPRRRRPLKGLLAVLSSLLFLLSLVALLILNGQPPDGD 59
Query: 67 QNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMF 114
+ + P RGV+EGVS KSN L S+ WTNAM
Sbjct: 60 VVLVSSPETSPETAAPVSRGVSEGVSEKSNGALAGA-DASFPWTNAML 106
|
This domain is functionally uncharacterized. This domain is found in eukaryotes. This presumed domain is typically between 96 to 119 amino acids in length. Length = 106 |
| >gnl|CDD|185718 cd08772, GH43_62_32_68, Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 6e-30
Identities = 72/311 (23%), Positives = 106/311 (34%), Gaps = 45/311 (14%)
Query: 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD----QWYD 186
DPN + Y G Y++F+ + + GN HA S DL++W P+A+V D
Sbjct: 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKD 56
Query: 187 INGVWTGSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245
G+W S + +G+ + YT + Q +A D + P V
Sbjct: 57 SGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNGPWTDYIGG------PVL 110
Query: 246 PRHIGPKD---FRDPTTAWAGPDGKWRLTIGSKIGKT-GISLVYQTTDFKTYELLDEYL- 300
P + D FRDP DGKW L GS G +Y++ D T++ L
Sbjct: 111 PDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDTTWKKGSAELL 169
Query: 301 -HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG-TYNPA 358
G E NG K+ L S++ T Y +
Sbjct: 170 ISEGEGGKQIEGPGLLK--KNG-------------KYYLFYSINGTGRVDSTYSIGYARS 214
Query: 359 NDKWTPDNPEEDVGIGLKWD-----YGRYYASKSFYDPYKKRRIVWGWINETDTESDDLE 413
P P+ D GL Y + +F D R ++ +D
Sbjct: 215 ESDTGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAY-NVQYADAPT 272
Query: 414 KGWASVQTIPR 424
GW IPR
Sbjct: 273 YGWGRSLAIPR 283
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 comprises sucrose-6-phosphate hydrolases, invertases, inulinases, levanases, eukaryotic fructosyltransferases, and bacterial fructanotransferases while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), while GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Members of this clan are retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) that catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. Structures of all families in the two clans manifest a funnel-shaped active site that comprises two subsites with a single route for access by ligands. Length = 286 |
| >gnl|CDD|185720 cd08979, GH_J, Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 3e-17
Identities = 68/278 (24%), Positives = 94/278 (33%), Gaps = 36/278 (12%)
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD---QWYDINGVWTGSAT 196
G YHLFY P GN + A S+D W P A +P +D GVWT S
Sbjct: 13 VGKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVV 72
Query: 197 ILPDGQIVMLYTG--STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-----PPRHI 249
PDG M YTG +VQ LA D L+ W K+ NPV P
Sbjct: 73 RDPDGTYRMFYTGYDRPKGAVQRIGLATSKD-----LIHWTKHGPNPVPRWYESGNPGPW 127
Query: 250 GPKDFRDPTTAWAGPDGKWRLTIGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGM 308
+RDP G WR+ G++ + G + + D + + G
Sbjct: 128 DDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLIHWTPVPPPPGPRTGYDD 187
Query: 309 WECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPDNPE 368
+ V I+G L S K Y +GT + P P
Sbjct: 188 GQLEVPQVVKIDGRWYLLYSGRNEDAK------------TGYRVGT-----ALFGPGRPL 230
Query: 369 EDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETD 406
D YA++ D ++ G++ D
Sbjct: 231 TLAE---LLDRTDLYAARPVPDGEGGGVVLEGFVQFGD 265
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH68 consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10); beta-fructofuranosidase (EC 3.2.1.26); inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. A common structural feature of all these enzymes is a 5-bladed beta-propeller domain, similar to GH43, that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. Length = 276 |
| >gnl|CDD|185736 cd08995, GH32_Aec43_like, Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 6e-16
Identities = 63/293 (21%), Positives = 109/293 (37%), Gaps = 44/293 (15%)
Query: 136 PLFYKGWYHLFYQYNP--DSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN-GVWT 192
P + G +H+FY ++P W + DL+++ A+ D + + T
Sbjct: 5 PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGT 64
Query: 193 GSATILPDGQIVMLYTG--STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG 250
GS I +G YTG K QV A D L+ W K P ++
Sbjct: 65 GSV-IKGEGTYHAFYTGHNLDGKPKQVVMHATSDD-----LITWTKDPEFILIADGEGYE 118
Query: 251 PKDFRDPTTAWAGPDGKWRLTIGS-----KIGKTGISLVYQTTDFKTYELLDEYLHAVPG 305
D+RDP W +G + + + + + G ++ + D K +E +E +A
Sbjct: 119 KNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWE-YEEPFYAPGL 177
Query: 306 TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYNPANDKWTPD 365
M EC D + + +++ + + + HY + +P PD
Sbjct: 178 YFMPECPDLFKM--------------GDWWYLVYSEFSENRKTHYRVSK-SPFGPWRAPD 222
Query: 366 NPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWA 417
+ D GR +YA+K+ D RR ++GW+ DD W
Sbjct: 223 DDTFD---------GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWG 264
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic nucleophile and a glutamate acts as the general acid/base; a conserved aspartate residue in the Arg-Asp-Pro (RDP) motif stabilizes the transition state. These enzymes are predicted to display a 5-fold beta-propeller fold as found for GH43 and CH68. The breakdown of sucrose is widely used as a carbon or energy source by bacteria, fungi, and plants. Invertase is used commercially in the confectionery industry, since fructose has a sweeter taste than sucrose and a lower tendency to crystallize. Length = 280 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 573 | |||
| KOG0228 | 571 | consensus Beta-fructofuranosidase (invertase) [Car | 100.0 | |
| COG1621 | 486 | SacC Beta-fructosidases (levanase/invertase) [Carb | 100.0 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 100.0 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 100.0 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 100.0 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 100.0 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 100.0 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 100.0 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 100.0 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 99.94 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 99.88 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.83 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 99.82 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 99.81 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 99.73 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 99.67 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 99.62 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 99.57 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 99.52 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.5 | |
| PF11837 | 106 | DUF3357: Domain of unknown function (DUF3357); Int | 99.47 | |
| cd08984 | 294 | GH43_5 Glycosyl hydrolase family 43. This glycosyl | 99.46 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 99.4 | |
| cd08979 | 276 | GH_J Glycosyl hydrolase families 32 and 68, which | 99.32 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 99.29 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 99.26 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 99.23 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 99.23 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 99.21 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 99.1 | |
| cd08992 | 349 | GH43_like_1 Glycosyl hydrolase family 43, uncharac | 99.09 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 99.01 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 98.89 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 98.82 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 98.8 | |
| PF02435 | 428 | Glyco_hydro_68: Levansucrase/Invertase; InterPro: | 98.8 | |
| cd08993 | 268 | GH43_DUF377 Glycosyl hydrolase family 43 containin | 98.79 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.76 | |
| cd08994 | 291 | GH43_like_2 Glycosyl hydrolase 43-like family cons | 98.63 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 98.62 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 98.59 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 98.55 | |
| cd08995 | 280 | GH32_Aec43_like Glycosyl hydrolase family 32. This | 98.51 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 98.46 | |
| cd08978 | 271 | GH_F Glycosyl hydrolase families 43 and 62 form CA | 98.46 | |
| cd08999 | 287 | GH43_ABN_2 Glycosyl hydrolase family 43. This glyc | 98.41 | |
| cd08983 | 276 | GH43_4 Glycosyl hydrolase family 43. This glycosyl | 98.38 | |
| cd08986 | 269 | GH43_7 Glycosyl hydrolase family 43. This glycosyl | 98.32 | |
| cd08772 | 286 | GH43_62_32_68 Glycosyl hydrolase families: GH43, G | 98.31 | |
| cd08991 | 294 | GH43_bXyl_2 Glycosyl hydrolase family 43. This gly | 98.25 | |
| cd08990 | 274 | GH43_AXH_like Glycosyl hydrolase family 43, includ | 98.2 | |
| PF04041 | 312 | DUF377: Domain of unknown function (DUF377); Inter | 98.14 | |
| cd08998 | 288 | GH43_ABN_1 Glycosyl hydrolase family 43. This glyc | 98.1 | |
| cd08996 | 298 | GH32_B_Fructosidase Glycosyl hydrolase family 32, | 98.06 | |
| cd08989 | 269 | GH43_XYL Glycosyl hydrolase family 43, beta-D-xylo | 97.91 | |
| cd08981 | 291 | GH43_2 Glycosyl hydrolase family 43. This glycosyl | 97.9 | |
| cd09002 | 280 | GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xy | 97.89 | |
| TIGR01322 | 445 | scrB_fam sucrose-6-phosphate hydrolase. | 97.7 | |
| cd08997 | 349 | GH68 Glycosyl hydrolase family 68, includes levans | 97.67 | |
| PF04616 | 286 | Glyco_hydro_43: Glycosyl hydrolases family 43; Int | 97.67 | |
| cd08988 | 279 | GH43_ABN Glycosyl hydrolase family 43. This glycos | 97.53 | |
| cd08980 | 288 | GH43_1 Glycosyl hydrolase family 43. This glycosyl | 97.51 | |
| smart00640 | 437 | Glyco_32 Glycosyl hydrolases family 32. | 97.5 | |
| cd09004 | 275 | GH43_bXyl Glycosyl hydrolase family 43, includes m | 97.32 | |
| COG2152 | 314 | Predicted glycosylase [Carbohydrate transport and | 97.32 | |
| cd08985 | 265 | GH43_6 Glycosyl hydrolase family 43. This glycosyl | 97.3 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 97.28 | |
| cd09001 | 269 | GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xy | 97.21 | |
| cd09000 | 288 | GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xy | 97.03 | |
| cd09003 | 311 | GH43_AXH_1 Glycosyl hydrolase family 43. This glyc | 97.02 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.91 | |
| COG3507 | 549 | XynB Beta-xylosidase [Carbohydrate transport and m | 96.9 | |
| PF03664 | 271 | Glyco_hydro_62: Glycosyl hydrolase family 62 ; Int | 96.59 | |
| cd08982 | 295 | GH43_3 Glycosyl hydrolase family 43. This glycosyl | 96.54 | |
| PF13088 | 275 | BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A | 96.17 | |
| cd08987 | 303 | GH62 Glycosyl hydrolase family 62, characterized a | 95.9 | |
| PF00251 | 308 | Glyco_hydro_32N: Glycosyl hydrolases family 32 N-t | 95.25 | |
| PF08244 | 86 | Glyco_hydro_32C: Glycosyl hydrolases family 32 C t | 92.51 | |
| PF13859 | 310 | BNR_3: BNR repeat-like domain; PDB: 3B69_A. | 91.29 | |
| cd00260 | 351 | Sialidase Sialidases or neuraminidases function to | 91.0 | |
| COG3940 | 324 | Predicted beta-xylosidase [General function predic | 89.42 | |
| PF13810 | 316 | DUF4185: Domain of unknown function (DUF4185) | 83.71 | |
| PTZ00334 | 780 | trans-sialidase; Provisional | 80.77 |
| >KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-118 Score=940.37 Aligned_cols=450 Identities=49% Similarity=0.884 Sum_probs=425.6
Q ss_pred CcccccccccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCC
Q 008224 109 WTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDIN 188 (573)
Q Consensus 109 ~~~~~~~w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~ 188 (573)
|++...+++||.|||||++|||||| +|++|+|||||||||.+++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 6777888999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCC
Q 008224 189 GVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDG 266 (573)
Q Consensus 189 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG 266 (573)
|||||||+++++|++++||||...+.+|+|++|++.|.+||.|++|.|.++||++.++ .+++...||||+|+|.+++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999988899999999999999999999999999999988 78889999999999999999
Q ss_pred cEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCc
Q 008224 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK 346 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~ 346 (573)
+|+|++|++.+++|.+++|+|+||++|+..+.++|....+|||||||||||..++.+|++++..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988899999999999999999999999888899999999999999999999999888888999999999999
Q ss_pred ceEEEEEEecCCCCcccCCCCCcccccceeeccCCCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEE
Q 008224 347 VDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV 426 (573)
Q Consensus 347 ~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL 426 (573)
+++|+||+||+++.+|+||+...++..++|+|||+|||+|||+|..++|||+|||++|+++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999999999999888877789999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEee-ccCccc-----ccCcccc-cC
Q 008224 427 LYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSGA-----MEEGYGC-SG 499 (573)
Q Consensus 427 ~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~-l~~~~~-----~~~~~~c-~~ 499 (573)
+|++..|++|.||||+|+|.||.......+..+++|+..++...++.|.|++++|++. |+.+.. ++..+.| .+
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~ 437 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTG 437 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEecccccccccCccccccceeeecC
Confidence 9998788999999999999999999888888899999999999999999999999988 654322 4567899 57
Q ss_pred CCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCC-EEEEeecCCCCCCcCCCCCCCCCCe
Q 008224 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRFVCFESELIPFDCPF 562 (573)
Q Consensus 500 ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~-~~~~c~d~~rSs~~~~~~~~~~~~~ 562 (573)
|...++.+|||||.+||+.+++|+|+|||+|+|... + .+.||+|++|||+++|+++|.-|.|
T Consensus 438 ~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~-~~~v~~csd~~~sSl~~d~~k~~~~af 500 (571)
T KOG0228|consen 438 GSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKK-KYVVLMCSDQSRSSLAEDNYKPSIGAF 500 (571)
T ss_pred CcccccCCCcceEEEEeecCcccceeeeEEEeecCC-cceeEEeccCCCccccccccccceeeE
Confidence 889999999999999999999999999999999876 6 9999999999999999988887744
|
|
| >COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-84 Score=698.19 Aligned_cols=331 Identities=35% Similarity=0.714 Sum_probs=281.1
Q ss_pred cccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 008224 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (573)
Q Consensus 116 w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSa 195 (573)
-+||.|||+||.||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
|+ .+|.+.+||||+.+ .+.|.||+|+|+|+ .+|+|+.+|||+..|+++ +.+||||+|+|. ++|+|||+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CCCcEEEE
Confidence 86 68999999999864 25689999999995 689998789999988886 789999998796 78999999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEcccccccCCCCC-ceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC----
Q 008224 272 IGSKI-GKTGISLVYQTTDFKTYELLDEYLHAVPGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT---- 345 (573)
Q Consensus 272 vGs~~-~~~G~illY~S~Dl~~W~~~~~l~~~~~~~G-mWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~---- 345 (573)
+||+. +..|.|+||+|+||++|++.+++.......| ||||||||+|+.+ ..+ .+|++..+.++.
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~--~~~--------~~~pqg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGE--DVL--------LFWPQGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCc--Cce--------EEcceeeecCCCcCCC
Confidence 99984 6689999999999999999999987644444 9999999999864 233 345555554332
Q ss_pred -cceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCC--CCCcCCCCcccCc
Q 008224 346 -KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQT 421 (573)
Q Consensus 346 -~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~--~~~~~~GWag~ls 421 (573)
....|++|+||+++ |..... -..+||+| +|||+|||.++ ++|||++|||++|+.. .++...||+|+||
T Consensus 249 ~~~~~Y~vG~~dg~~--f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGKE--FKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccce--eEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 24679999999974 443332 24589999 89999999995 7999999999999987 5677789999999
Q ss_pred ccEEEEEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEE
Q 008224 422 IPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDI 477 (573)
Q Consensus 422 lPReL~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi 477 (573)
|||||+|. +| +|+|+||+||++||..+..+.++.++.. ..+....+.++++
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l 371 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYEL 371 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEE
Confidence 99999995 34 7999999999999999877788887765 3344444445544
|
|
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-80 Score=669.61 Aligned_cols=382 Identities=50% Similarity=0.940 Sum_probs=303.7
Q ss_pred eeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 008224 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (573)
Q Consensus 122 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 201 (573)
||+|+.||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 567
Q ss_pred eEEEEEcccCCC------CcceE-EEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 202 QIVMLYTGSTDK------SVQVQ-NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~~------~~q~q-~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
++++||||.... ..+.| ++|.+.| +++|+|+++|||+.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999997421 12333 4454544 48999998899998777666789999999775 44799999998
Q ss_pred ec-CCeeEEEEEEeCCCCCcEEccccccc-CCCC-CceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEE
Q 008224 275 KI-GKTGISLVYQTTDFKTYELLDEYLHA-VPGT-GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351 (573)
Q Consensus 275 ~~-~~~G~illY~S~Dl~~W~~~~~l~~~-~~~~-GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~ 351 (573)
+. ++.|+++||+|+||++|++.+.++.. .... +||||||||+|++++ ...||||++|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 74 56799999999999999999998754 2333 599999999997543 23699999998876678999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCC-CCcCCCCcccCcccEEEEEe
Q 008224 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTES-DDLEKGWASVQTIPRTVLYD 429 (573)
Q Consensus 352 iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~-~~~~~GWag~lslPReL~L~ 429 (573)
+|.|++. .+|+|+... +...+.++|+| +|||+|||.+++.+||||||||++++... .....||+|+|||||||.|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999863 479887653 22334589999 89999999997556999999999997422 22338999999999999997
Q ss_pred ecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeec--ccceEEEEEEEEEeeccCcccccCcccccCCCcccccc
Q 008224 430 NKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDI--GVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAM 507 (573)
Q Consensus 430 ~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~--~~~~qldi~a~f~~~l~~~~~~~~~~~c~~ga~~r~~~ 507 (573)
.++| +|+|+||+||++||.. .....+.+..+....+.. ..+.+++|+++|+... .++
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-------------~~~------ 360 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS-------------GGA------ 360 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEEEeCC-------------Ccc------
Confidence 4455 7999999999999954 334445555433322221 2445778888776430 001
Q ss_pred CcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCC
Q 008224 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFV 549 (573)
Q Consensus 508 gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs 549 (573)
++|||.+.++++.+|.|.|.|...+ -.++.|+++|.
T Consensus 361 ~~~~l~~~~~~~~~~~~~i~~~~~~------~~l~vdR~~~~ 396 (437)
T smart00640 361 GPFGLLVLASEDLSEQTAVYFDVSK------GTLCLDRRSSG 396 (437)
T ss_pred eeEEEEEEeCCCCCceEEEEEEcCC------eEEEEecCCCC
Confidence 3599999999999999999995322 24556886664
|
|
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-79 Score=662.57 Aligned_cols=366 Identities=30% Similarity=0.550 Sum_probs=290.9
Q ss_pred cccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 008224 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (573)
Q Consensus 116 w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSa 195 (573)
.+||+|||+|+.||||||||++|++|+|||||||||.++.||+|+||||+|+|||||+++|+||.|++.||..|||||||
T Consensus 12 ~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsa 91 (445)
T TIGR01322 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSA 91 (445)
T ss_pred CcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 196 TILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
++ .+|+++|||||+.. ...|.|++|+|.|+ .+|+|++ +|||.++++....+||||+| |+ .+|+|||+
T Consensus 92 v~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~ 162 (445)
T TIGR01322 92 VD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMV 162 (445)
T ss_pred Ee-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEE
Confidence 76 78999999999752 23688999999985 6999984 59998755544578999999 54 46899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEcccccccC----CCCC-ceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC
Q 008224 272 IGSKI-GKTGISLVYQTTDFKTYELLDEYLHAV----PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345 (573)
Q Consensus 272 vGs~~-~~~G~illY~S~Dl~~W~~~~~l~~~~----~~~G-mWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~ 345 (573)
+|++. +..|.+++|+|+||++|++.+.+.... ...| ||||||||+|++ ||||.+|..+.
T Consensus 163 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~ 227 (445)
T TIGR01322 163 IGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGL 227 (445)
T ss_pred EEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEecccc
Confidence 99874 456889999999999999999887543 2233 999999999962 57777664431
Q ss_pred ----------cceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCC
Q 008224 346 ----------KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEK 414 (573)
Q Consensus 346 ----------~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~ 414 (573)
....|++|+||..+.+|++++. ..++|+| +|||+|||.++ ++|||+||||++++...++.+.
T Consensus 228 ~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~ 300 (445)
T TIGR01322 228 DASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRD 300 (445)
T ss_pred CcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccC
Confidence 1357999999987889987642 2579999 89999999986 7999999999999887777789
Q ss_pred CCcccCcccEEEEEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEeeccCcccccCc
Q 008224 415 GWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEG 494 (573)
Q Consensus 415 GWag~lslPReL~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~l~~~~~~~~~ 494 (573)
||+|+|||||+|.|. +| +|+|+||+||++||.+... ... ......+... ..+++|+++|+.+
T Consensus 301 ~W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~-~~~~~l~~~~~~~---------- 362 (445)
T TIGR01322 301 GWAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGL-NGEFELILDLEKD---------- 362 (445)
T ss_pred CcccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCC-CceEEEEEEecCC----------
Confidence 999999999999996 45 7999999999999986542 011 1111222222 2366666655321
Q ss_pred ccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCC
Q 008224 495 YGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVC 550 (573)
Q Consensus 495 ~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~ 550 (573)
.+ .-|||.+ .+ ..|.|.|.|...+ -.++.|+++|+.
T Consensus 363 ------~~-----~~~~l~~-~~--~~~~~~i~~~~~~------~~l~~dr~~~~~ 398 (445)
T TIGR01322 363 ------SA-----FELGLAL-TN--KGEETLLTIDADE------GKVTLDRRSSGN 398 (445)
T ss_pred ------Cc-----cEEEEEE-eC--CCCeEEEEEECcC------CEEEEEccCCCC
Confidence 11 1378888 55 3467888885332 123358888874
|
|
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-79 Score=633.87 Aligned_cols=299 Identities=42% Similarity=0.850 Sum_probs=250.5
Q ss_pred eeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCC
Q 008224 122 HFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG 201 (573)
Q Consensus 122 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 201 (573)
||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|++++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeC-CCceecC-CCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCe
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~-~nPVl~~-p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~ 279 (573)
+++|||||...+..|.|++|+|.|.+ ++|+|++ +||||.. |++ ...+||||+|+|. ++|+|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEE-CTTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEe-cCCEEEEEEeccccCc
Confidence 89999999987668999999997653 8999998 4999985 445 7899999999987 4699999999987788
Q ss_pred eEEEEEEeCCCCCcEEcccccccCC-CCCceeeecEEEecccCcccceeccCCCCeEEEEEeee----CCCcceEEEEEE
Q 008224 280 GISLVYQTTDFKTYELLDEYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL----DDTKVDHYAIGT 354 (573)
Q Consensus 280 G~illY~S~Dl~~W~~~~~l~~~~~-~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~----~~~~~~~Y~iG~ 354 (573)
|.+++|+|+||++|++.+.+..... ..+||||||||+|++.+. .+...+|||++|. ......+|+||+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876543 356999999999987521 1224568999998 345678999999
Q ss_pred ecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCC-CcCCCCcccCcccEEEEEeecC
Q 008224 355 YNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESD-DLEKGWASVQTIPRTVLYDNKT 432 (573)
Q Consensus 355 ~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~-~~~~GWag~lslPReL~L~~~~ 432 (573)
||..+.+|+++.. ...++|+| +|||+|+|.++.++|||+||||+++++... ....||+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 9877889987621 25789999 599999999986669999999999987533 23699999999999999975 4
Q ss_pred CceEEEcc
Q 008224 433 GSNVVQWP 440 (573)
Q Consensus 433 g~~L~q~P 440 (573)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 56899998
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-68 Score=548.25 Aligned_cols=286 Identities=42% Similarity=0.798 Sum_probs=244.6
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
||||||||++|++|+||||||+||.++.|++++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999876559999999
Q ss_pred cccCC---CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEEE
Q 008224 208 TGSTD---KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (573)
Q Consensus 208 TG~~~---~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~il 283 (573)
||... ...|.|++|+|+|. +++|+|...+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|+++
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99864 45799999999953 489999988998863 3445679999999654 499999999874 3568899
Q ss_pred EEEeCCCCCcEEccccc-ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC------cceEEEEEEec
Q 008224 284 VYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT------KVDHYAIGTYN 356 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l~-~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~------~~~~Y~iG~~d 356 (573)
+|+|+||++|++.+.+. .......|||||+||++.+ ..||||.+|.... ...+|++|++|
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999998774 2222345999999999973 1389998887653 34689999999
Q ss_pred CCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeecCCce
Q 008224 357 PANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTGSN 435 (573)
Q Consensus 357 ~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~~g~~ 435 (573)
.. .|+++. ....++|+| +|||+|+|.++ ++|||+||||++++......+.||+|+|||||+|.|++ +.+
T Consensus 221 ~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~--~~~ 290 (298)
T cd08996 221 GT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD--GGR 290 (298)
T ss_pred CC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc--CCE
Confidence 76 455431 124689999 89999999997 79999999999999888888999999999999999975 238
Q ss_pred EEEccHHH
Q 008224 436 VVQWPVEE 443 (573)
Q Consensus 436 L~q~Pv~E 443 (573)
|.|+||+|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-54 Score=442.71 Aligned_cols=266 Identities=23% Similarity=0.408 Sum_probs=219.8
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCC--CCcEEEEEEecCccCeeecceeccC-CCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVP-DQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~w--G~~~WGHAvS~DLVhW~~lp~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
.||. ++|++|+||||||++|.+..| ++++||||+|+|||||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 4886 999999999999999999988 8999999999999999999999988 4577899999999976 679999999
Q ss_pred cccCCC--CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCee
Q 008224 208 TGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG 280 (573)
Q Consensus 208 TG~~~~--~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G 280 (573)
||.... ..|.|++|+|.|+ ++|+|.+.+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 997642 4688999999884 899999888998755566667899999976545799999999874 4578
Q ss_pred EEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC-CcceEEEEEEecCCC
Q 008224 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNPAN 359 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~-~~~~~Y~iG~~d~~~ 359 (573)
++.+|+|+||++|++.+.+... ....|||||++|+++ .||||..|..+ .....|++|+-. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~---------------g~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMG---------------DWWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEEC---------------CEEEEEEEeccCCCcEEEEEeCCC--C
Confidence 8999999999999998776533 234599999999995 27999988764 245679999622 3
Q ss_pred CcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeecCC
Q 008224 360 DKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (573)
Q Consensus 360 ~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~~g 433 (573)
+.|..... ..+| | +|||+|||.|+ +||||||||++++.+.++.++||+|+|| ||+|.+.+ +|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 45642211 1378 6 89999999996 8999999999999888888999999999 67777763 55
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=318.66 Aligned_cols=242 Identities=26% Similarity=0.322 Sum_probs=190.6
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceec--cCCCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAM--VPDQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~-~~WGHAvS~DLVhW~~lp~AL--~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
||+++. |+||||||++|.+..|+. ..||||+|+||+||++.+.+| .+...+|..|||+|+++...+|+++||||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565544 889999999999877654 568999999999999999888 56678899999999998765599999999
Q ss_pred ccCC--CCcceEEEEEecCCCCCCcceEEEeCCCcee-----cCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCee
Q 008224 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTG 280 (573)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl-----~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G 280 (573)
|... ...|.|++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9863 45788999999985 899998777754 222233456899999966533499999999864 3457
Q ss_pred EEEEEEeCCCCCcEEccccc--ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC-CcceEEEEEEecC
Q 008224 281 ISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-TKVDHYAIGTYNP 357 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~--~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~-~~~~~Y~iG~~d~ 357 (573)
.+.+|+|+|+++|++.+.+. .......+||||++|+++ .||||..+... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~---------------g~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID---------------GRWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC---------------CEEEEEEEecCccCCccEEEEeccc
Confidence 88899999999999988763 222234599999999985 27999888764 4467899998765
Q ss_pred CCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCC
Q 008224 358 ANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINET 405 (573)
Q Consensus 358 ~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~ 405 (573)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455431 2357888 8999999998657999999999886
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=302.70 Aligned_cols=269 Identities=26% Similarity=0.389 Sum_probs=204.8
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
|||+ +++++|+||||||++|.+ ++++|+|++|+||+||++++.+|. |..+++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998884 67778889999999987655999999
Q ss_pred EcccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecC-CCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEEE
Q 008224 207 YTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (573)
Q Consensus 207 YTG~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~il 283 (573)
||+... ...|.|++|+|+|+. ..|++...+||+.. +.......+|||+|++ +++|+|||++++.. +..+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~-d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFE-DDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEE-cCCCCEEEEEccccCCCCCeEE
Confidence 999753 346889999998863 45776655566543 2233456899999954 46699999999763 2356788
Q ss_pred EEEeCCCCCcEEcccc--cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC------CcceEEEEEEe
Q 008224 284 VYQTTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD------TKVDHYAIGTY 355 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~------~~~~~Y~iG~~ 355 (573)
+++|+|+.+|+..+.. .......+++|||++|++. .+|+|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~---------------g~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN---------------GKYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC---------------CEEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 2222345699999999985 27888888654 23456888764
Q ss_pred cCCCCcccCCCCCc-ccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEE
Q 008224 356 NPANDKWTPDNPEE-DVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVL 427 (573)
Q Consensus 356 d~~~~~f~pd~~~~-d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~ 427 (573)
+ .+.|++..... -.-.....|.+ .+||++.|.++ ++|+++++|+.+++.... ...+|+++|+|||+++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 3 45676543210 00011234555 79999999987 799999999999875444 6689999999999864
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=235.57 Aligned_cols=193 Identities=21% Similarity=0.194 Sum_probs=139.2
Q ss_pred cCCcc-eeEECCEEEEEEeeCCCC----CCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 131 NDPNG-PLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 131 NDPNG-~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
-|..| ++-++|+.-+|+...|.. +.|+.++|||++|+||+||++.+. |.|+.++|..|||||||++..||+++|
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~~-l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGGK-VFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCCc-cCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 35566 344688755999877654 468899999999999999999554 678899999999999998766799999
Q ss_pred EEcccCC----CCcceEEEEEecCCCCCCcceEEEeC--CCceecCC--------------CCCCCCCCCCCeeEeecCC
Q 008224 206 LYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYP--GNPVLVPP--------------RHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 206 ~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~--~nPVl~~p--------------~g~~~~~fRDP~V~w~~~d 265 (573)
||||+.. .....|++|.+.+.. +..|.+.. ..+++.+. +.-...+||||+|+..+.+
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 9999853 235678887775531 22444321 12344321 1112578999999443337
Q ss_pred CcEEEEEeeecC-C---------------------------eeEEEE--EEeCCCCCcEEcccccccCCCCCceeeecEE
Q 008224 266 GKWRLTIGSKIG-K---------------------------TGISLV--YQTTDFKTYELLDEYLHAVPGTGMWECVDFY 315 (573)
Q Consensus 266 G~w~MvvGs~~~-~---------------------------~G~ill--Y~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f 315 (573)
|+|||+++++.. . .|+|.+ ++|+|+.+|++.++|+.+......||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998632 2 255444 5778999999999998654334579999999
Q ss_pred EecccCcccceeccCCCCeEEEEEeee
Q 008224 316 PVAINGSVGLDTSATGPGIKHVLKASL 342 (573)
Q Consensus 316 ~l~~~~~~gl~~s~~g~~~k~VL~~S~ 342 (573)
+++ .||+|..|.
T Consensus 244 ~~~---------------gk~yL~~s~ 255 (349)
T cd08997 244 FHN---------------GKYYLFTIS 255 (349)
T ss_pred EEC---------------CEEEEEEeC
Confidence 995 278888773
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-21 Score=201.31 Aligned_cols=189 Identities=19% Similarity=0.263 Sum_probs=140.9
Q ss_pred eeeecCCCcccCCcceeEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEecCcc-CeeecceeccCC--CCcCCCcEEe
Q 008224 121 FHFQPEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAV---W-GNITWGHAVSADLI-HWLYLPIAMVPD--QWYDINGVWT 192 (573)
Q Consensus 121 yHf~P~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-G~~~WGHAvS~DLV-hW~~lp~AL~Pd--~~yD~~Gv~S 192 (573)
.+|..+..++-+|. +++. +|+||||||.+|.+.. | ....||||+|+|+. +|+..+++|.|+ ..+|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888999997 6665 4899999999887644 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEccCCeEEEEEcccCC-------CCcceEEEEEecCCCCCCcceEEEeCCCceecCC------------------C
Q 008224 193 GSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP------------------R 247 (573)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p------------------~ 247 (573)
++++. .+|+++|+|||... ...+.+++|++.+. +..|++. .+|||.+. .
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 67999999999753 23567778888763 2466664 34554220 0
Q ss_pred -------------------------------------------CCCCCCCCCCeeEeecCCCcEEEEEeeec----CCee
Q 008224 248 -------------------------------------------HIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GKTG 280 (573)
Q Consensus 248 -------------------------------------------g~~~~~fRDP~V~w~~~dG~w~MvvGs~~----~~~G 280 (573)
......+|||+| |+ .+|+|||++++.. +..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~V-~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPFV-WY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCceE-EE-eCCEEEEEEeecccCcCCCCc
Confidence 001235799999 76 4699999999874 2467
Q ss_pred EEEEEEeCCCCCcEEcccccc----c-CC----CCCceeeecEE-Eec
Q 008224 281 ISLVYQTTDFKTYELLDEYLH----A-VP----GTGMWECVDFY-PVA 318 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~~----~-~~----~~GmWECPd~f-~l~ 318 (573)
.+.+|+|+|+++|++.+.++. . .. ...|||||++| ...
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 888999999999999987742 1 11 23599999999 664
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=184.51 Aligned_cols=179 Identities=21% Similarity=0.272 Sum_probs=131.3
Q ss_pred ccccccceeeeecCCCc----ccCCcceeEECCEEEEEEeeCCCCC--CCCCcEEEEEEecCccCeeecceeccCCCCcC
Q 008224 113 MFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSA--VWGNITWGHAVSADLIHWLYLPIAMVPDQWYD 186 (573)
Q Consensus 113 ~~~w~Rp~yHf~P~~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~--~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD 186 (573)
+..|+|...-+.+...| +-+|. +++++|+||||||++|..+ .++.++||||+|+||++|++.++++. +
T Consensus 58 l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~-----~ 131 (294)
T cd08984 58 GATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL-----D 131 (294)
T ss_pred CCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc-----C
Confidence 55676555333222222 34676 7889999999999998753 34578999999999999999887632 2
Q ss_pred CCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCC
Q 008224 187 INGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266 (573)
Q Consensus 187 ~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG 266 (573)
..++++++++.+.||+++||||+... .+.+++|.+.|+ .+|++. .+++.. ...++|+| |+ .+|
T Consensus 132 ~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g 194 (294)
T cd08984 132 SDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKG 194 (294)
T ss_pred CCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECC
Confidence 45789999987667999999998643 345689999884 899985 355542 23479999 54 478
Q ss_pred cEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCC----CCCceeeecEEEec
Q 008224 267 KWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP----GTGMWECVDFYPVA 318 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~----~~GmWECPd~f~l~ 318 (573)
+|||+++. ..| +.+|+|+|+.+|++.+.++.... ...+++||+|+...
T Consensus 195 ~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 195 YYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred EEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 99999854 235 56999999999999998775321 12378999999764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.3e-19 Score=178.74 Aligned_cols=160 Identities=19% Similarity=0.254 Sum_probs=122.1
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccC--CCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVP--DQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~P--d~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
|| |+++++|+||||||.++.. +.++||||+|+|++||+..+ +.|.| +..++..||++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 57 5889999999999987643 56899999999999999875 34556 5577889999999874 6999999999
Q ss_pred ccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEee-cCCCcEEEEEeeec---CCeeEEE
Q 008224 209 GSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA-GPDGKWRLTIGSKI---GKTGISL 283 (573)
Q Consensus 209 G~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~-~~dG~w~MvvGs~~---~~~G~il 283 (573)
+... ...+.+++|.|+|+ .+|+|... + +. + ..||+.+ |. ..+|+|+|+..... +..+.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~~-~-~~-~------~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLGT-S-LV-P------NNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEecc-c-CC-C------CCCCEEE-eeEEECCEEEEEEccccCCCCCCCcEE
Confidence 9763 34678999999985 89999732 1 11 1 2478888 43 25899999996432 3456788
Q ss_pred EEEeCCCCCcEEcccccccCCCCCceeeec
Q 008224 284 VYQTTDFKTYELLDEYLHAVPGTGMWECVD 313 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l~~~~~~~GmWECPd 313 (573)
+++|+|+.+|+..+.++.. ..+.||+-.
T Consensus 142 lA~S~Dl~~W~~~~~~~~~--~~~~wd~~~ 169 (268)
T cd08993 142 LSFSPDLVHWGNHRFVLSP--RPNHWEQLK 169 (268)
T ss_pred EEECCCcCccCCCeEEecC--CCCceeece
Confidence 9999999999987776543 223576543
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.9e-19 Score=178.10 Aligned_cols=192 Identities=15% Similarity=0.162 Sum_probs=138.5
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCC-CCcCCCcEEeeeEEEccCCeEEE
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd-~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
.||++||+ +++++|+||||++....+ +....|.+++|+||+||++++.+|.+. ..++..++|.++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~--~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAG--GEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCC--CCeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899998 578899999999876533 224679999999999999999998764 356778999999875 6899999
Q ss_pred EEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEE
Q 008224 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY 285 (573)
+||+. +.+++|+|+|+. ..|++..++|++.... ....++||.|+ .+.+|+|||+.++. .+..++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998753 5688755678876422 23578999994 45789999999863 1222233
Q ss_pred EeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEE
Q 008224 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (573)
Q Consensus 286 ~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG 353 (573)
-|.|+.+|+.....+ .....++.|||.+|+.. .+++|..|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~---------------G~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGS-EITPKNYFEGPFMFKRN---------------GIYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceee-eccCCCceecceEEEEC---------------CEEEEEEECCCCCCCCceEE
Confidence 578898887543332 11223589999999874 26777777654332234444
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-16 Score=160.81 Aligned_cols=206 Identities=19% Similarity=0.161 Sum_probs=138.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-cCCCcEEeeeEEEccCCeEEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~-yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
+.+-||. +++++|+|+||+..... ..|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 4568997 78889999999985432 67999999999999999988877654 4567889888764 68999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee---EE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG---IS 282 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G---~i 282 (573)
||+.... ..+.+++|+|.|.. ..|++....++. .+. .....+||.|+ .+++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~-~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLC-CPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEe-cCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCceE
Confidence 9998642 34667788887652 478886433333 222 23567999995 4568999999987532211 12
Q ss_pred EEE-EeCCCCCcEEccc-ccccC--CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcce--EEEEEE--
Q 008224 283 LVY-QTTDFKTYELLDE-YLHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVD--HYAIGT-- 354 (573)
Q Consensus 283 llY-~S~Dl~~W~~~~~-l~~~~--~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~--~Y~iG~-- 354 (573)
.+. .|+|+.+|..... ++... ....++|||.+|+.. .+++|..|....... .|.+|-
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~~S~~~~~~~~~~y~i~~~~ 214 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG---------------GYYYLFYSAGGCCSGASTYAVGVAR 214 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC---------------CEEEEEEEcCCccCCCCCEEEEEEE
Confidence 232 3689988864332 22211 123489999999884 278888886532221 455542
Q ss_pred ecCCCCcccC
Q 008224 355 YNPANDKWTP 364 (573)
Q Consensus 355 ~d~~~~~f~p 364 (573)
-+...+.|+.
T Consensus 215 s~~~~Gpw~~ 224 (287)
T cd08999 215 SKSLLGPYVK 224 (287)
T ss_pred eCCCcCCcCC
Confidence 2223456664
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.9e-15 Score=152.76 Aligned_cols=195 Identities=14% Similarity=0.154 Sum_probs=138.5
Q ss_pred CCcceeEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEccCCeEEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLVhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
||. +++++|+|+||.......+. +....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 887 77889999999987654432 2234589999999999999999887543 36788999999864 79999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~ 286 (573)
||+......+.+++|+|+|+. ..|+.....|++... .......||.++ .+++|++||+.++. .++.+.-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--SGGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--CCCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEEe
Confidence 999754345678899997752 579886555555421 123567899995 45789999999864 23444456
Q ss_pred eCCCCCcEEccccccc-----CCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEE
Q 008224 287 TTDFKTYELLDEYLHA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (573)
Q Consensus 287 S~Dl~~W~~~~~l~~~-----~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG 353 (573)
|+|+.+|+.....+.. ....+..|+|.+|+.. .+++|..|........|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------G~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN---------------GTYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEEC---------------CEEEEEEECCCCcEEEEEEc
Confidence 8899999754443321 1123478999999874 27888888754334445544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.3e-14 Score=142.49 Aligned_cols=202 Identities=22% Similarity=0.186 Sum_probs=133.3
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
||. +++++|+|+|||..... ....++.++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 887 78899999999987542 234678999999999999998875 44456678999999875 579999999
Q ss_pred cccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--CeeEEEE
Q 008224 208 TGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLV 284 (573)
Q Consensus 208 TG~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--~~G~ill 284 (573)
|+... ...+.+++|+|+|+ ..|.+....+ .+ .......+||.+++ +++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~~~---~~-~~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKVIR---PP-TSNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccccC---cC-ccCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEEE
Confidence 99743 23567889999886 4554432111 11 11234678999954 567999999987532 2455677
Q ss_pred EEeCCCCCcEEcccc-c-ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEEE--ecCCCC
Q 008224 285 YQTTDFKTYELLDEY-L-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT--YNPAND 360 (573)
Q Consensus 285 Y~S~Dl~~W~~~~~l-~-~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG~--~d~~~~ 360 (573)
.++++...|...... . .......+.|||.+|+.. .+++|..|........|.++- -+...+
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~~~~~~y~~~~~~s~~~~G 210 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKN---------------GYYYLTYSANGTGDYGYNIGYATSDSIDG 210 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEEC---------------CEEEEEEEeCCCCCCCceEEEEECCCCCC
Confidence 887665444322221 1 111233489999999874 278888876543222344442 333344
Q ss_pred cccC
Q 008224 361 KWTP 364 (573)
Q Consensus 361 ~f~p 364 (573)
.|+.
T Consensus 211 p~~~ 214 (271)
T cd08978 211 PYVK 214 (271)
T ss_pred CcCc
Confidence 5553
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=140.54 Aligned_cols=180 Identities=17% Similarity=0.108 Sum_probs=124.7
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEEEEEccc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGS 210 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~ 210 (573)
||. +++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 887 78889999999876542 23578999999999999998887655 36778999999865 689999999997
Q ss_pred CCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC---eeEEEEEE
Q 008224 211 TDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK---TGISLVYQ 286 (573)
Q Consensus 211 ~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~---~G~illY~ 286 (573)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.+++ +.+|+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778999998752 46777532232 21 1 3567999954 5679999999864321 23444446
Q ss_pred eCCCCCcEEccc--c--ccc--------------CCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 287 TTDFKTYELLDE--Y--LHA--------------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 287 S~Dl~~W~~~~~--l--~~~--------------~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
+.|+.+|.-... . ... .....+-|+|.++..+ .+++|..|...
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~---------------g~yyl~ys~~~ 204 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN---------------GRYYLTYSANH 204 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC---------------CEEEEEEECCC
Confidence 788877752111 0 000 0112378999999885 26888777543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.5e-13 Score=135.60 Aligned_cols=179 Identities=20% Similarity=0.150 Sum_probs=120.9
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-------CcCCCcEEeeeEEEccCCe
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-------WYDINGVWTGSATILPDGQ 202 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~-------~yD~~Gv~SGSavv~~dG~ 202 (573)
+.||. +++++|+|+||+... .+++++|+||+||++.+.+|.+.. ..+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46997 889999999999864 689999999999999998886543 23567899999865 6999
Q ss_pred EEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
++|+||+.... ..+.+++|+|+|. ....|++. +||+...++......+||.++. +++|++||+.++.. .|+
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~---~~gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~~--~~i 141 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTL---PDGPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSFW--GGI 141 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCC---CCCCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeecc--CCE
Confidence 99999987543 3466789999874 12579874 5887654332334678999954 56899999998642 222
Q ss_pred EEEEE-eCC---CCCcEEccc-ccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 282 SLVYQ-TTD---FKTYELLDE-YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 282 illY~-S~D---l~~W~~~~~-l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.+.+ +.| ...|..... +.......+..|-|-+|.-. .+++|..|..
T Consensus 142 -~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~---------------g~YYl~~S~~ 192 (288)
T cd08998 142 -FLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG---------------GYYYLFVSYG 192 (288)
T ss_pred -EEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC---------------CEEEEEEEcc
Confidence 1222 222 123321111 11111123467999998774 2677877753
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.4e-13 Score=141.12 Aligned_cols=171 Identities=21% Similarity=0.266 Sum_probs=121.3
Q ss_pred cceeeeecCCCc-ccCCcceeEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEecCccCeeecceeccCCC
Q 008224 118 RTSFHFQPEKNW-MNDPNGPLFYKGWYHLFYQYNPD-----------SA--VWGNITWGHAVSADLIHWLYLPIAMVPDQ 183 (573)
Q Consensus 118 Rp~yHf~P~~gW-mNDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~ 183 (573)
.|..=+.+..+- ..||..+++.+|+|||||++... .+ .|.....+||+|+||+||++.+.+|.+..
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 344444444443 46998899999999999996431 11 24567789999999999999998886543
Q ss_pred --CcCCCcEEeeeEEEccCCeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCC----------
Q 008224 184 --WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---------- 247 (573)
Q Consensus 184 --~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~---------- 247 (573)
.||..++|..+++ ..+|+++|+|++.... ..+.+++|++.++. ..|++. .+||+.+..
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 5899999999986 5799999999975321 23567999998752 359986 589986521
Q ss_pred --------CCCCCCCCCCeeEeecCCCcEEEEEeeecC--------CeeEEEEEEeCCCC-CcEEc
Q 008224 248 --------HIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGISLVYQTTDFK-TYELL 296 (573)
Q Consensus 248 --------g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--------~~G~illY~S~Dl~-~W~~~ 296 (573)
.++...+.||.|+ . .+|+|||++.+... ..-.+.|..|++.. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 1234456899985 3 57999999965321 11246678888865 57654
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.6e-15 Score=132.09 Aligned_cols=97 Identities=41% Similarity=0.621 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH-HHhcCCCCCCCCC--CCCCCCCCCCCCCCCCCCccc
Q 008224 14 YPPLLPEEQPSDAGTPASHRKPFKGFAAILASAIFLLSLVALI-INQTQKPLPSQNN--IVPTSKPTSFSNPEPRGVAEG 90 (573)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 90 (573)
|+|||+.+.+... ++.++||++|.+++|+++++||++||+++ ++.++. +.... .......++...+.|||+++|
T Consensus 7 Y~PLP~~~~~~~~-~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~SRGv~~G 83 (106)
T PF11837_consen 7 YTPLPDSSESAPG-PGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQS--PDGSSVSSSSPPPSPETATPVSRGVSEG 83 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCcccCC-CCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccCC--CCccccccCCCCCCCccccCCCCCcccC
Confidence 9999975554432 24556888899999999999999999998 222211 11111 122334445555689999999
Q ss_pred ccccccccccccccCCCCCccccc
Q 008224 91 VSAKSNSHLLRNIKGSYNWTNAMF 114 (573)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~ 114 (573)
||||++....+. ..+|||+|+||
T Consensus 84 VSEKS~~~~~~~-~~~FpWtNaML 106 (106)
T PF11837_consen 84 VSEKSNGAGSGA-GNSFPWTNAML 106 (106)
T ss_dssp --------------------HHHH
T ss_pred cccccccCccCC-CCCCCCccccC
Confidence 999998874444 67899999997
|
; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B. |
| >cd08984 GH43_5 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-12 Score=132.15 Aligned_cols=169 Identities=18% Similarity=0.237 Sum_probs=119.5
Q ss_pred ccCCcceeEE--CCEEEEEEee-C---CCC-CCCCC-cEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccC
Q 008224 130 MNDPNGPLFY--KGWYHLFYQY-N---PDS-AVWGN-ITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPD 200 (573)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wG~-~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~d 200 (573)
.-||. +++. +|+|||||.. . |.. ..|.. ..+|+|+|+| |+||+.++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 78998 8887 7899999942 1 111 23432 5799999999 99999998877665555667799999864 68
Q ss_pred CeEEEEEcccCC-----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 201 GQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 201 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
|+++||||.... ......++|+|+| |.+|++.+ ++... .....||.|+ +..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~-----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLD-----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccC-----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 1235678899987 37899863 33211 1245699995 44679999999643
Q ss_pred cCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEec
Q 008224 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (573)
Q Consensus 276 ~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~ 318 (573)
.. ...+.+..|+|+.+|+..+.++.. ..-|.|.+|+..
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~~----~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLGD----RPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCccccC----CCCCCCCeeEEC
Confidence 22 223456789999999987655431 134899999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.1e-11 Score=119.94 Aligned_cols=197 Identities=18% Similarity=0.092 Sum_probs=131.7
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC----CcCCCcEEeeeEEEcc-CCeEEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVML 206 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~----~yD~~Gv~SGSavv~~-dG~~~~~ 206 (573)
|| ++++++|+|++|--....+..+ ...|-..+|+||+||+.++.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~~-~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDTA-FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCcc-cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 45 3888999999998765432111 24578889999999999999998764 3455679999997643 6999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY 285 (573)
|+....+ ....+++|+|++.. ..|+... .+. +.+ ...|||.+++ ++||++||++++..+. .+.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~-DdDG~~Yl~~~~~~~~--~i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV-DDDGTAYLLYSDRDNS--DLYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE-cCCCCEEEEEecCCCC--ceEEE
Confidence 9986432 34578899998653 5677642 221 222 4679999955 5789999999875322 23344
Q ss_pred E-eCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC---CcceEEEEEEecCCCCc
Q 008224 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD---TKVDHYAIGTYNPANDK 361 (573)
Q Consensus 286 ~-S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~---~~~~~Y~iG~~d~~~~~ 361 (573)
+ ++|+..+.-. ... .......|||.+|+.+ .+++|..|... .....|++.+ ...+.
T Consensus 149 ~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~---------------g~YYL~~S~~t~~~~~~~~y~~s~--s~~GP 208 (265)
T cd08985 149 RLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN---------------GKYYLLTSGLTGWNPNDARYATAT--SILGP 208 (265)
T ss_pred EeCCCcccccce--EEE-ccCCCccccceEEEEC---------------CEEEEEEccCCCccCCceEEEEec--CCCCC
Confidence 4 3677777532 211 1123478999999985 27888887542 2345677664 22356
Q ss_pred ccC
Q 008224 362 WTP 364 (573)
Q Consensus 362 f~p 364 (573)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.5e-11 Score=120.29 Aligned_cols=155 Identities=21% Similarity=0.285 Sum_probs=106.2
Q ss_pred cccccccccceeee--ecC----CCcccCCcceeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc--
Q 008224 110 TNAMFTWQRTSFHF--QPE----KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV-- 180 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf--~P~----~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~-- 180 (573)
+.....|+|..--+ .|. .+.+-||. +++.+ |+|||||..+... ......+++|+|+|+++|+..+..+.
T Consensus 40 S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~ 117 (276)
T cd08979 40 SDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPR 117 (276)
T ss_pred cCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCccee
Confidence 44455565544322 122 24466887 66677 9999999976532 23357899999999999998875542
Q ss_pred -----CCCCcCCCcEEeeeEEEccC-CeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCC
Q 008224 181 -----PDQWYDINGVWTGSATILPD-GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDF 254 (573)
Q Consensus 181 -----Pd~~yD~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~f 254 (573)
+...++...+.++.++..++ |+++|+|++........+.+|.|.|+ .+|++....+ ....+.....+
T Consensus 118 ~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~~~~ 190 (276)
T cd08979 118 WYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDDGQL 190 (276)
T ss_pred eeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccCCcC
Confidence 22334556788999876544 89999999876545577889999884 8999875333 11222344678
Q ss_pred CCCeeEeecCCCcEEEEEeee
Q 008224 255 RDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 255 RDP~V~w~~~dG~w~MvvGs~ 275 (573)
.+|.++ + .+|+|+|++.+.
T Consensus 191 e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 191 EVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred ccceEE-E-ECCEEEEEEEec
Confidence 899994 3 469999999875
|
This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-10 Score=115.49 Aligned_cols=183 Identities=20% Similarity=0.170 Sum_probs=126.0
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC--CCcE-EeeeEEEccCCeEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--INGV-WTGSATILPDGQIV 204 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD--~~Gv-~SGSavv~~dG~~~ 204 (573)
+..-||. +++.+|.|+||+...... ..+..++|+||+||+..+.++.+....+ ..+. |.+.++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5668998 889999999999876533 4578899999999999998887665332 3333 999986 5799999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC--eeEE
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGIS 282 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~--~G~i 282 (573)
|+|+.......+.+.+|++.+.. ..|+.... .++. ...-.||.+++ +++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~~-~~~~------~~~~iD~~vf~-d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPGK-IPIP------GGNSIDPSVFV-DDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEEE-EEEE------SSSSSSEEEEE-ETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----cccccccc-eeec------cccccCceEEE-ecCCCcEEeCcccCCCccceeE
Confidence 99993333345668899998763 58887632 2221 23557999954 5679999999986432 2334
Q ss_pred EEEE-eCCCCCcEEcc-ccc-ccC--CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 283 LVYQ-TTDFKTYELLD-EYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 283 llY~-S~Dl~~W~~~~-~l~-~~~--~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
.+.+ +.|...+.... ... ... ...+.-|+|-+|..+ .+++|..|...
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~---------------g~yYl~~s~~~ 200 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG---------------GKYYLFYSAGG 200 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET---------------TEEEEEEEESG
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcC---------------CCEEEEEeccC
Confidence 4444 56777776554 222 211 234588999999885 26788888544
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.2e-10 Score=115.83 Aligned_cols=178 Identities=20% Similarity=0.177 Sum_probs=115.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--c----CCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--Y----DINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~--y----D~~Gv~SGSavv~~dG 201 (573)
+.+-||. +++++|.|+||..... + ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~----~-~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFE----Y-FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCcc----c-CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677998 8889999999853211 1 134789999999999999988854321 1 346799999865 699
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC----
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---- 277 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~---- 277 (573)
+++|+|++........+.+|.+++.. ..|+. |++.. ...+||.+++ +++|++||+.++...
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998754333456788887653 35652 33321 1568999965 578999999886421
Q ss_pred -CeeEEEEEEeCCCCCcEEccccc--ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 278 -KTGISLVYQTTDFKTYELLDEYL--HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 278 -~~G~illY~S~Dl~~W~~~~~l~--~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
..+.+.+.+. |...|+..+... .........|+|.+|+.+ .+++|..|..
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~---------------g~YYl~ys~~ 196 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD---------------GWYYLLIAEG 196 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC---------------CEEEEEEecC
Confidence 1233444433 333454433321 111112467999999874 2788877754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.4e-10 Score=115.46 Aligned_cols=186 Identities=13% Similarity=0.219 Sum_probs=121.8
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCC---------CCCCcEEEEEEecCccCeeecceeccCC--CCcCCCcEEeeeEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSA---------VWGNITWGHAVSADLIHWLYLPIAMVPD--QWYDINGVWTGSAT 196 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wG~~~WGHAvS~DLVhW~~lp~AL~Pd--~~yD~~Gv~SGSav 196 (573)
.+.-||. ++.++|+|+||....-... .+....+--.+|+||+||+.++.++.|. ..| ..++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4678998 6788999999987643221 1223457788999999999999988732 233 3478999987
Q ss_pred EccC----CeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC-CCCCCCC-CCCCeeEeecCCCcEEE
Q 008224 197 ILPD----GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKD-FRDPTTAWAGPDGKWRL 270 (573)
Q Consensus 197 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-~g~~~~~-fRDP~V~w~~~dG~w~M 270 (573)
. .+ |+++|+|+.. ...+++|+|+++. -.|+...+.|++... ++..... -.||.+++ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 5 55 9999999863 2347899987653 579875456777532 2322222 36999955 57899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 271 TIGSKIG-----KTGISLVYQ-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 271 vvGs~~~-----~~G~illY~-S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+.|+... ..+.+.+.+ ++|+..- .++... ....+.+|.|.+|+.+ .+++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~---------------G~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN---------------GTYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC---------------CEEEEEEeCC
Confidence 9986421 112344444 3566543 232211 1112479999999874 2788877754
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.8e-10 Score=113.12 Aligned_cols=182 Identities=13% Similarity=0.087 Sum_probs=120.2
Q ss_pred CcccCCcceeEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEcc-CCeE
Q 008224 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVW-GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILP-DGQI 203 (573)
Q Consensus 128 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-G~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~-dG~~ 203 (573)
+-+.||. +++. +|+||||+.-.-....+ +.....+++|+||+||+....++.... ...++|...++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4568998 7776 89999999754322222 346789999999999999887653221 34578999987654 7999
Q ss_pred EEEEcccCCC---Cc--ceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC
Q 008224 204 VMLYTGSTDK---SV--QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (573)
Q Consensus 204 ~~~YTG~~~~---~~--q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~ 278 (573)
+|+|+..... .. ..+..|.+.| +.+|+.. .+++. ++ ....|+.++ + .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~--~~---~~~ID~~v~-~-~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWID--LG---ANVIDTTVV-K-VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeec--CC---CCeEeeEEE-E-eCCEEEEEEecCCC-
Confidence 9999987542 12 2233344334 3788752 45554 22 356799985 3 35999999865322
Q ss_pred eeEEEEEEeCCCC-CcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 279 TGISLVYQTTDFK-TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 279 ~G~illY~S~Dl~-~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
..+.+.+|++|. .|+...... .......|-|.+|+..+ +.+|+|..+..
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~-------------~~~y~L~~d~y 207 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNN-------------GGGWYLYGDNY 207 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECC-------------CCEEEEEEEEC
Confidence 346677899877 677654321 11123689999999863 13688876543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.2e-11 Score=122.98 Aligned_cols=160 Identities=23% Similarity=0.246 Sum_probs=108.8
Q ss_pred ceeEECCE--EEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccC
Q 008224 135 GPLFYKGW--YHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (573)
Q Consensus 135 G~~y~~G~--YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (573)
|.+.++|. |||+|...-. ..+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+.+
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 45656665 8888865422 2223489999999999999875 689999999999999999975 6899999999987
Q ss_pred CCCcceEEEEEecCCCCCCcceEEEeCCCceecCCC---CCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeC
Q 008224 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (573)
Q Consensus 212 ~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~ 288 (573)
..+ -.+++|+|+|. .+|+|.. +++.... ......-||=..+-...+|+|+|+.+ .+.+.+..|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 543 45799999984 9999985 2222111 00011124544432246899999987 3457788899
Q ss_pred CCCCcEEcccccccCCCCCceee
Q 008224 289 DFKTYELLDEYLHAVPGTGMWEC 311 (573)
Q Consensus 289 Dl~~W~~~~~l~~~~~~~GmWEC 311 (573)
|+++|+.....+.. ...++||+
T Consensus 180 Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB---STTSSCS
T ss_pred Cccccccccccccc-CCCCcChh
Confidence 99999876653322 23457887
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.4e-09 Score=107.88 Aligned_cols=135 Identities=19% Similarity=0.154 Sum_probs=94.2
Q ss_pred CcccCCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEE
Q 008224 128 NWMNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 128 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~ 204 (573)
.++-||. ++++ +|+|+||..............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578997 7787 99999999754322101123578999999999999999886543 3445689999985 5799999
Q ss_pred EEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 205 MLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 205 ~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
|+|+..... ....+.+|+++++. -.|+.....|+... + ....||.++ .+.||++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~f-~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTLY-VDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCceE-EcCCCCEEEEEEe
Confidence 999876433 22346788887652 46887543454221 1 234699984 4578999999874
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.5e-09 Score=111.56 Aligned_cols=186 Identities=19% Similarity=0.222 Sum_probs=119.0
Q ss_pred cccccccceeeeec-CCC-c----ccCCcceeEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-Ceeecc-eeccCC
Q 008224 112 AMFTWQRTSFHFQP-EKN-W----MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLP-IAMVPD 182 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P-~~g-W----mNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~DLV-hW~~lp-~AL~Pd 182 (573)
....|+|-..=|.+ +.+ | +.-|. +++++|+|||||+..-. ...-...+.|.|+|+|.. .|+++. +.|.|+
T Consensus 88 Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~ 166 (349)
T cd08992 88 DGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPS 166 (349)
T ss_pred CCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCC
Confidence 34567766522322 121 3 34465 77889999999985321 111123467888888876 698764 445554
Q ss_pred C------------------CcCCCcEEeeeEEEccCCeEEEEEcccCC-------CCcceEEEEEecCCCCCCcceEEEe
Q 008224 183 Q------------------WYDINGVWTGSATILPDGQIVMLYTGSTD-------KSVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 183 ~------------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
. .+|..+|...+++ ..+|+++|||+|+.. ...+.+++|+++++- -.|+|.
T Consensus 167 ~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v~-~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----GPf~r~ 241 (349)
T cd08992 167 NDGIWKGDEDNRFLVKKKGSFDSHKVHDPCLF-PFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----GPYVKS 241 (349)
T ss_pred cCCceeeccCceeEeccCCCcccCceECCEEE-EECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----CCCEeC
Confidence 2 3566777777764 579999999999752 134678999998874 569999
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCcE-EEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEE
Q 008224 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW-RLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYP 316 (573)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w-~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~ 316 (573)
+.|||+... + ..+| |+.. +.+ .|+..-..+ .|. +..|+|.++|+....+.......|..+|||-+.
T Consensus 242 ~~nPi~~~~------~--~~~~-~~~~-~~~~~~~~~d~~~-~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (349)
T cd08992 242 PYNPITNSG------H--ETCV-WQYK-GGIAAMLTTDGPE-KNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADE 308 (349)
T ss_pred CCCcccCCC------C--ceEE-EecC-CceEEEEeccCCC-Cce--EEeCCCCccEEEeeeccCCCccccCccCccccc
Confidence 899998531 1 2377 9744 455 555543222 344 567999999998766643333456667777543
|
This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.1e-08 Score=103.06 Aligned_cols=180 Identities=18% Similarity=0.170 Sum_probs=111.5
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCeE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQI 203 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y-------D~~Gv~SGSavv~~dG~~ 203 (573)
.||. ++.++|+|+||.... .+.-++|+||+||+..+.+|.+...+ ...++|...++. .+|++
T Consensus 1 ~DP~-vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCCE-EEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 3897 788899999987531 36789999999999999888643322 246899999864 68999
Q ss_pred EEEEcccCCC-CcceEEEEEecCCCCCCc-ceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 204 VMLYTGSTDK-SVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 204 ~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L-~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
+|+|+..... ..+.+++|++++...|.- ..|++ ..+|+..... ....-.||.+++ ++||++||+.|+.. .|
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~g- 142 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--GG- 142 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEE-cCCCCEEEEecccC--CC-
Confidence 9999986432 346778999987643310 12443 2466543211 112347999955 57899999998632 23
Q ss_pred EEEEE-eCCCCCcEEcccc---cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 282 SLVYQ-TTDFKTYELLDEY---LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 282 illY~-S~Dl~~W~~~~~l---~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+.+.+ +.|...-...+.. .......+.-|-|-+++-+ .+++|..|..
T Consensus 143 i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~---------------g~YYl~~S~g 193 (279)
T cd08988 143 IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG---------------DYYYLFVSFG 193 (279)
T ss_pred EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC---------------CeEEEEEEcC
Confidence 22222 4454432111111 1111112356888887763 2677777653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-07 Score=96.97 Aligned_cols=125 Identities=18% Similarity=0.143 Sum_probs=87.7
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~dG 201 (573)
+..-||. +++++|.|+||+.-... .-.....+|+||+||+..+.++...... ...++|...++ ..+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECC
Confidence 5567998 88899999999853211 1124568999999999988776542211 24579999985 4799
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
+++|+|+.........+.+|++++.. -.|+. |+... ..-.||.+++ ++||+.||+.|+
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecC
Confidence 99999998644334567889887653 34653 44322 1347999954 579999999875
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.5e-07 Score=95.17 Aligned_cols=188 Identities=14% Similarity=0.090 Sum_probs=114.5
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec--cCCC-CcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQ-WYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL--~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
||. ++.+++.|+||+.-.. .....++|+||+||+.....+ .+.. .....++|...+. ..+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELH-YIDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEE-EECCEEEEEEE
Confidence 897 7788999999986321 346789999999999865332 2322 1345689999986 46999999999
Q ss_pred ccCC--CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC---CeeEEE
Q 008224 209 GSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG---KTGISL 283 (573)
Q Consensus 209 G~~~--~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~---~~G~il 283 (573)
.... ...+.+.+|.+++..++ +..|+.. .+++... + ..--||.++ .+ +|++||+.+.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccEE
Confidence 8754 23456677887753223 4679874 2443211 1 123599994 43 5999999875421 122344
Q ss_pred EEEeCCCCCcEEcccc--cccCC----C--CCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEEE
Q 008224 284 VYQTTDFKTYELLDEY--LHAVP----G--TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGT 354 (573)
Q Consensus 284 lY~S~Dl~~W~~~~~l--~~~~~----~--~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG~ 354 (573)
+.+..+...+. ++. +.... . .+.-|-|.+++.+ .+++|..|........|.+|-
T Consensus 144 ~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~---------------G~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 144 IAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN---------------GKVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC---------------CEEEEEEECCCCCCCCCEEEE
Confidence 45554433332 221 11110 1 1345778777774 267788876554344566653
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.5e-07 Score=93.69 Aligned_cols=169 Identities=15% Similarity=0.097 Sum_probs=108.1
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-----------cCCCcEEeeeEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-----------YDINGVWTGSAT 196 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~-----------yD~~Gv~SGSav 196 (573)
++.-||. +++++|+|++|....- + ...+...+|+||+||+..+.++..... --..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~----~-~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMH----Y-SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCcc----c-CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557998 7888999999986421 1 113467889999999999877643211 113579999986
Q ss_pred EccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec
Q 008224 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~ 276 (573)
. .+|+++|+|+.. .+.+.+|++++.. -.|+.. .++. ...||.+++ ++||+.||+.++.
T Consensus 83 ~-~~gkyy~yys~~----~~~~~v~~a~~p~----Gpw~~~--~~~~---------~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTN----TGGTYIYTADDPE----GPWTKT--ALDG---------GYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEec----CCCeEEEEcCCCC----CCCcCC--CcCC---------CcccCceEE-cCCCCEEEEeCCC-
Confidence 4 599999999986 2346788887642 457543 1211 457999955 5789999998753
Q ss_pred CCeeEEEEEE-eCCCCCcEEcc-cccccCC-CCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 277 GKTGISLVYQ-TTDFKTYELLD-EYLHAVP-GTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 277 ~~~G~illY~-S~Dl~~W~~~~-~l~~~~~-~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+ +.+.+ +.|+....-.. .++.... ..+.-|-|.+++-+ .+++|..|..
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------G~YYl~~S~~ 191 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN---------------GYYYIFNIAW 191 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC---------------CEEEEEEecC
Confidence 2 22333 56766552111 1221111 12367999888753 2677777754
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.1e-07 Score=97.58 Aligned_cols=192 Identities=20% Similarity=0.174 Sum_probs=120.5
Q ss_pred cCCccee-EECCEEEEEEeeCCCC----CCCCCcEEEEEEecCcc----CeeecceeccCCCCc-CCCcEEeeeEEEcc-
Q 008224 131 NDPNGPL-FYKGWYHLFYQYNPDS----AVWGNITWGHAVSADLI----HWLYLPIAMVPDQWY-DINGVWTGSATILP- 199 (573)
Q Consensus 131 NDPNG~~-y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLV----hW~~lp~AL~Pd~~y-D~~Gv~SGSavv~~- 199 (573)
-|+.|-+ -++|+.-+|-.--|.. ..|+.-+.++.-|++.. +|++.+.++.....+ ...--|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 4555644 4699777777765543 24567899999999999 999999876554431 23467999999887
Q ss_pred CCeEEEEEcccCC----CCcceE-----EEEEecCCCCCCcceEEEeCCCceecCCCCCC--------CCCCCCCeeEee
Q 008224 200 DGQIVMLYTGSTD----KSVQVQ-----NLAYPADPSDPLLLDWVKYPGNPVLVPPRHIG--------PKDFRDPTTAWA 262 (573)
Q Consensus 200 dG~~~~~YTG~~~----~~~q~q-----~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~--------~~~fRDP~V~w~ 262 (573)
||++.||||.... ...|.. +++...+ ....+..|.++ ..++. +.|.. ...||||++ +.
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~-~~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~-f~ 217 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADD-DGVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHV-FE 217 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECS-TEEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEE-EE
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCC-CceeEccccce--eEeec-cchhhhhChhhcCCccccCCee-EE
Confidence 8999999998542 222322 1223222 12234455554 34554 43321 267999999 55
Q ss_pred c-CCCcEEEEEeeec-------------------------C--------CeeEEEEEEeCC--CCCcEEcccccccCCCC
Q 008224 263 G-PDGKWRLTIGSKI-------------------------G--------KTGISLVYQTTD--FKTYELLDEYLHAVPGT 306 (573)
Q Consensus 263 ~-~dG~w~MvvGs~~-------------------------~--------~~G~illY~S~D--l~~W~~~~~l~~~~~~~ 306 (573)
+ .+|+-||+.-+.. . ..|+|.|.+.+| +..|++.++|+.+..-.
T Consensus 218 DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~ 297 (428)
T PF02435_consen 218 DPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVN 297 (428)
T ss_dssp ETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTB
T ss_pred CCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceeccccc
Confidence 4 6888888874320 0 257777777644 56899999999875545
Q ss_pred CceeeecEEEecccCcccceeccCCCCeEEEEEeee
Q 008224 307 GMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 342 (573)
Q Consensus 307 GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~ 342 (573)
...|=|+++.++ .||+|+.+.
T Consensus 298 de~ERP~iv~~~---------------gkyYLFt~s 318 (428)
T PF02435_consen 298 DELERPHIVFMN---------------GKYYLFTIS 318 (428)
T ss_dssp S-EEEEEEEEET---------------TEEEEEEEE
T ss_pred ccccCCcEEEEC---------------CEEEEEEEe
Confidence 589999999996 278887654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A .... |
| >cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.5e-08 Score=100.54 Aligned_cols=98 Identities=23% Similarity=0.344 Sum_probs=75.0
Q ss_pred eEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 194 SATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 194 Savv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
.++ ..||+++||||+........+++|+|+|+ .+|++.+ +|++.++ ...+...++||.|+ + .+|+|+|+
T Consensus 4 ~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m~ 74 (268)
T cd08993 4 AVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYIT 74 (268)
T ss_pred eEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEEE
Confidence 444 47999999999876555678999999995 8999975 5655442 23456778999995 3 58899999
Q ss_pred Eeeec--CCeeEEEEEEeCCCCCcEEccccc
Q 008224 272 IGSKI--GKTGISLVYQTTDFKTYELLDEYL 300 (573)
Q Consensus 272 vGs~~--~~~G~illY~S~Dl~~W~~~~~l~ 300 (573)
+++.. .....+.+++|+|+.+|++.+..+
T Consensus 75 Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~~ 105 (268)
T cd08993 75 YAARPNAPNGTRIGLATTKDFITFERLGTSL 105 (268)
T ss_pred EEccCCCCCCcEEEEEEeCCcceEEEecccC
Confidence 98864 344578899999999999986543
|
This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.76 E-value=3.5e-07 Score=93.75 Aligned_cols=130 Identities=20% Similarity=0.185 Sum_probs=87.3
Q ss_pred cccCCcceeEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEecCccCeeecceeccCCCC------------cCCCcE
Q 008224 129 WMNDPNGPLFY-KGWYHLFYQYNPDSA----VW-GNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGV 190 (573)
Q Consensus 129 WmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-G~~~WGHAvS~DLVhW~~lp~AL~Pd~~------------yD~~Gv 190 (573)
||-||. ++.. +|.|+|+..-.-.+. .| ..-..-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 789998 6655 679999987542221 01 1234568999999999999887754321 235679
Q ss_pred EeeeEEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCC-ceecCCCCCCCCCCCCCeeEeecCCCcE
Q 008224 191 WTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGN-PVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (573)
Q Consensus 191 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~n-PVl~~p~g~~~~~fRDP~V~w~~~dG~w 268 (573)
|...+.. .+|+++|+|+..... ....+.+|++.+.. ..|+....+ ++ ..-.||.++ .+.||++
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~ 144 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKV 144 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCE
Confidence 9888864 689999999976432 23456778776543 467765322 11 124699994 4678999
Q ss_pred EEEEee
Q 008224 269 RLTIGS 274 (573)
Q Consensus 269 ~MvvGs 274 (573)
||+.++
T Consensus 145 Yl~~~~ 150 (269)
T cd08986 145 YLVWHN 150 (269)
T ss_pred EEEeeC
Confidence 999875
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.7e-07 Score=94.86 Aligned_cols=108 Identities=25% Similarity=0.328 Sum_probs=81.4
Q ss_pred cCCcceeEECCEEEEEEeeCCCC----CCCCCcEEEEEEecC-ccCeee-cceeccCCC-CcCCCcEEeeeEEEccCCeE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDS----AVWGNITWGHAVSAD-LIHWLY-LPIAMVPDQ-WYDINGVWTGSATILPDGQI 203 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~D-LVhW~~-lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~ 203 (573)
-+|. +++++|+|+|||..+... ...++...|.|+|+| +-+|+. ..++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 3675 677899999999976431 122356899999999 469998 456676654 36788899999986558999
Q ss_pred EEEEcccCCC---CcceEEEEEecCCCCCCcceEEEeCCCcee
Q 008224 204 VMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVL 243 (573)
Q Consensus 204 ~~~YTG~~~~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl 243 (573)
+|+|+|.... ..+.|++|+|.|.. ..|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998632 35778999998852 579998766764
|
This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.1e-07 Score=93.85 Aligned_cols=122 Identities=18% Similarity=0.205 Sum_probs=85.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
+..-||. +++.+|+|+|+..-.. + .....-.+|+||+||+..+.++.+. ..++|...+. ..+|+++|+|
T Consensus 13 ~~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yy 81 (280)
T cd09002 13 GDYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYF 81 (280)
T ss_pred CCCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEE
Confidence 3445996 8889999999764211 1 1246778899999999988877542 4579998875 5899999999
Q ss_pred cccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 208 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 208 TG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
+.......+.+.+|++.+.. ..|++ |+... ....-||.+++ +.+|++||+.+.
T Consensus 82 s~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 82 PAIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred EeecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 98754445667889886653 45754 22111 11235999965 578999999864
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.5e-06 Score=88.84 Aligned_cols=109 Identities=26% Similarity=0.416 Sum_probs=74.6
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcc
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 209 (573)
.-||. +++++|+|+||-... + +..+|+||+||+..+.++. ..++|..++.. .+|+++++|+.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36997 778899999886542 1 3678999999999987753 46799999864 68987766654
Q ss_pred cCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 210 ~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
. .+.+|++.|+. .-.|... .+. ......||.+++ +.||++||+.|+.
T Consensus 65 ~------~~~v~~s~~p~---gp~w~~~--~~~-------~~~~~IDp~vf~-DdDGk~Yl~~g~~ 111 (295)
T cd08982 65 Y------NSRIYKTADPL---SGPWEEV--DKS-------FPPGLADPALFI-DDDGRLYLYYGCS 111 (295)
T ss_pred C------CceEEEeCCCC---CCCcccc--ccc-------cCCCccCCceEE-CCCCCEEEEEecC
Confidence 2 13577776642 2236542 010 112356999954 5789999999753
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.2e-06 Score=86.59 Aligned_cols=208 Identities=17% Similarity=0.322 Sum_probs=130.4
Q ss_pred cccceeeeecCCCc---ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcCCC
Q 008224 116 WQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYDIN 188 (573)
Q Consensus 116 w~Rp~yHf~P~~gW---mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD~~ 188 (573)
|--+.--.+|..|| +-||- +++++|+||+|-..+-. . .|+-+-+. |+||+.++.|+. +.. ...
T Consensus 7 w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-~-----~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~ 76 (303)
T cd08987 7 WTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-G-----NYGSMYFN-FTDWSQAASATQYYLQNGN--MTG 76 (303)
T ss_pred eccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-C-----Cceeeeec-ccCHhHhccchhhcccCCC--CCc
Confidence 33333445788899 79997 67889999999875431 1 24333333 999998887652 221 234
Q ss_pred cEEeeeEE-EccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCc
Q 008224 189 GVWTGSAT-ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK 267 (573)
Q Consensus 189 Gv~SGSav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~ 267 (573)
+.|...++ ..+++++||+|+-. ..+.|++.|..+| ..|... .|++...........-|++|+ .++++
T Consensus 77 ~fwAPqVfyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd~~ 144 (303)
T cd08987 77 YRVAPQVFYFAPQNKWYLIYQWW------PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDDTN 144 (303)
T ss_pred ccccCEEeeeccCCEEEEEEecC------ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCCCC
Confidence 67888875 25789999999951 2468999998877 467764 567653222233456899994 46888
Q ss_pred EEEEEeeecCCeeEEEEEEeC-C---CCC--cEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEee
Q 008224 268 WRLTIGSKIGKTGISLVYQTT-D---FKT--YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKAS 341 (573)
Q Consensus 268 w~MvvGs~~~~~G~illY~S~-D---l~~--W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S 341 (573)
.||+... ..| -+|+|+ . |-+ .+.. .+........+.|-|+.+.+.. ..+++|.++
T Consensus 145 ~YLff~~---dnG--~iyra~~~~~nFp~~~~~~~-~~~~~~~~~~lfEa~~Vykv~G-------------~~~Ylmive 205 (303)
T cd08987 145 CYLFFSD---DNG--KLYRSSTTLGNFPNGGTETV-IIMSDSNKNNLFEASNVYKVKG-------------QNQYLLIVE 205 (303)
T ss_pred EEEEEec---CCC--eEEEEecchhhCCCCCCccE-EEecCCCccccceeeEEEEECC-------------CeEEEEEEE
Confidence 8888743 234 367762 2 322 1111 1111111124799999999962 237888888
Q ss_pred eCCCcceEEEEEEe--cCCCCcccCC
Q 008224 342 LDDTKVDHYAIGTY--NPANDKWTPD 365 (573)
Q Consensus 342 ~~~~~~~~Y~iG~~--d~~~~~f~pd 365 (573)
..+..+..|+++ + +--.+.|+|.
T Consensus 206 A~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 206 AIGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred ecCCCCCCeEEE-EEcCCCCCCceec
Confidence 877644457777 3 2234677764
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >cd08995 GH32_Aec43_like Glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.2e-06 Score=87.63 Aligned_cols=151 Identities=19% Similarity=0.161 Sum_probs=95.1
Q ss_pred ccccccccceeeeecCCCc-----ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc--eeccCCC
Q 008224 111 NAMFTWQRTSFHFQPEKNW-----MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP--IAMVPDQ 183 (573)
Q Consensus 111 ~~~~~w~Rp~yHf~P~~gW-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp--~AL~Pd~ 183 (573)
..+..|++-.--+.|+.++ +-.|+ +++.+|+|||||.-+... .......++|+|+|+++|+..+ +.+.+..
T Consensus 38 ~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~ 115 (280)
T cd08995 38 KDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGE 115 (280)
T ss_pred cCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCcc
Confidence 3456676655555553322 23344 566789999999865322 1124568999999999999865 3343233
Q ss_pred CcCCCcEEeeeEEEcc-CCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCe
Q 008224 184 WYDINGVWTGSATILP-DGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (573)
Q Consensus 184 ~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~ 258 (573)
.++...+-...++.++ +|+++|+|.+... ...-.+.++.|+| |++|+.. .+++.+.. ...+=-|.
T Consensus 116 ~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~---~~~~E~P~ 185 (280)
T cd08995 116 GYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGL---YFMPECPD 185 (280)
T ss_pred ccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCC---cceeecce
Confidence 3444444566766543 6999999987543 2334566788877 4899875 45553321 12345677
Q ss_pred eEeecCCCcEEEEEeee
Q 008224 259 TAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 259 V~w~~~dG~w~MvvGs~ 275 (573)
+ ++ -+|+|+|+++..
T Consensus 186 l-~~-~~g~~~L~~s~~ 200 (280)
T cd08995 186 L-FK-MGDWWYLVYSEF 200 (280)
T ss_pred E-EE-ECCEEEEEEEec
Confidence 7 43 579999999865
|
This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.6e-06 Score=89.58 Aligned_cols=147 Identities=22% Similarity=0.285 Sum_probs=109.5
Q ss_pred ceeEECCEEEEEEee------CCCCCCCCCcEEEEEEecCccC-eeecc-eeccC-CCCcCCCcEEeeeEEEccCCeEEE
Q 008224 135 GPLFYKGWYHLFYQY------NPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVP-DQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 135 G~~y~~G~YHLFYQ~------nP~~~~wG~~~WGHAvS~DLVh-W~~lp-~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
|+++.++++||+|+- .+. .-.|.+-|.|+|.++ |+-.+ +.+.| ..+++.-||....++. .||+++|
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~m 109 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYM 109 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEE
Confidence 578899999999986 222 346788999999999 98665 67888 5578889999999974 6899999
Q ss_pred EEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-C--CeeEE
Q 008224 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G--KTGIS 282 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~--~~G~i 282 (573)
.|||.+. ..+..++|+++|. .+|+|.+ +++ +| ++||-.++=...+|+|.|+---.. + ..+-+
T Consensus 110 tYTa~s~-~g~~~~la~t~~f-----~n~~rig--~i~-~p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~ni 174 (314)
T COG2152 110 TYTAYSD-KGPRLALAVTKDF-----LNWERIG--AIF-PP------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNI 174 (314)
T ss_pred EEEecCC-CCcccchhhhhhh-----hhhhhcc--ccc-CC------CCCCceEeeEEecCcEEEEEeecccccCccCce
Confidence 9999854 4577899999985 7899963 333 22 456655421235789998864322 1 14668
Q ss_pred EEEEeCCCCCcEEcccccc
Q 008224 283 LVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 283 llY~S~Dl~~W~~~~~l~~ 301 (573)
.+..|.|+.+|.....++.
T Consensus 175 wia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 175 WIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred EEEEcCCccCCCccceeec
Confidence 8999999999987755553
|
|
| >cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F | Back alignment and domain information |
|---|
Probab=98.46 E-value=5e-06 Score=83.33 Aligned_cols=156 Identities=17% Similarity=0.138 Sum_probs=96.2
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
.+-+-+|. +++++|+|+|||..+..+ ......+.|+|+|+.+|........+ .....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~--~~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP--TSNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC--ccCCCCccCcceEEcCCCCEEEE
Confidence 45677887 889999999999987542 23456899999999999765321111 11344678899988777999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--CeeEEE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISL 283 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--~~G~il 283 (573)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ ++ .+|+|||++.+... ..-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1334566666553 22222 123321111111223457888 44 57999999876522 223466
Q ss_pred EEEeCCCC-CcEEc
Q 008224 284 VYQTTDFK-TYELL 296 (573)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (573)
+.+|++.. -|+..
T Consensus 202 ~~~s~~~~Gp~~~~ 215 (271)
T cd08978 202 YATSDSIDGPYVKK 215 (271)
T ss_pred EEECCCCCCCcCcC
Confidence 77887763 35543
|
This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma |
| >cd08999 GH43_ABN_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.4e-06 Score=84.16 Aligned_cols=153 Identities=16% Similarity=0.136 Sum_probs=93.5
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee-cc-CCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MV-PDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~A-L~-Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
-.|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+.. +. +. +..+....++++++||+++|+|
T Consensus 63 waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~---~~~~~~Dp~v~~d~dG~~Yl~~ 136 (287)
T cd08999 63 WAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE---GEGGAIDPSFFTDTDGKRYLVW 136 (287)
T ss_pred cCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC---CCCCccCCCeEECCCCCEEEEE
Confidence 3454 778899999999876433 235678999999965 89876532 22 22 2345677888877799999999
Q ss_pred cccCCC--CcceEEEE-EecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec--CC--ee
Q 008224 208 TGSTDK--SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GK--TG 280 (573)
Q Consensus 208 TG~~~~--~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~--~~--~G 280 (573)
.+.... ..+.+.++ .+.| +.+|+... ..++.+........+=-|.+ ++ .+|+|||++.+.. .. .=
T Consensus 137 ~~~~~~~~~~~~i~~~~ls~d-----~~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y 208 (287)
T cd08999 137 KSDGNSIGKPTPIYLQELSAD-----GLTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTY 208 (287)
T ss_pred eccCCCCCCCceEEEEEeCCC-----CccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCE
Confidence 764322 12224444 4444 35665421 22333221222223446887 44 5899999997642 11 22
Q ss_pred EEEEEEeCCCC-CcEEcc
Q 008224 281 ISLVYQTTDFK-TYELLD 297 (573)
Q Consensus 281 ~illY~S~Dl~-~W~~~~ 297 (573)
.+.+++|+|+. .|+...
T Consensus 209 ~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 209 AVGVARSKSLLGPYVKAP 226 (287)
T ss_pred EEEEEEeCCCcCCcCCCC
Confidence 45678999976 787654
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08983 GH43_4 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.5e-06 Score=87.93 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=62.9
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCeeEEEEEEeCCCCCcEEcccccccCCCC-Cceee
Q 008224 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISLVYQTTDFKTYELLDEYLHAVPGT-GMWEC 311 (573)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G~illY~S~Dl~~W~~~~~l~~~~~~~-GmWEC 311 (573)
.++|||.+.. +...+|||+|++...+|+|||+..... .....+.+|+|+||++|+..+.++...+.. .+| +
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 4689998643 458899999976446889999876532 112257799999999999987765332333 378 9
Q ss_pred ecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 312 VDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 312 Pd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
|++|....+ .+|+|..+..
T Consensus 81 Pev~~d~~~-------------g~y~~~~s~~ 99 (276)
T cd08983 81 PEAFWDAER-------------GQYVVYWSSR 99 (276)
T ss_pred ccceEcCCC-------------CeEEEEEecc
Confidence 999987532 2677766654
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08986 GH43_7 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.1e-06 Score=84.65 Aligned_cols=120 Identities=15% Similarity=0.165 Sum_probs=71.0
Q ss_pred CCCCeeEeecCCCcEEEEEeeecC---------CeeEEEEEEeCCCCCcEEcccccccCC---------------CCCce
Q 008224 254 FRDPTTAWAGPDGKWRLTIGSKIG---------KTGISLVYQTTDFKTYELLDEYLHAVP---------------GTGMW 309 (573)
Q Consensus 254 fRDP~V~w~~~dG~w~MvvGs~~~---------~~G~illY~S~Dl~~W~~~~~l~~~~~---------------~~GmW 309 (573)
||||+|+ +..+|.|||+..+... ..+.+.+|+|+||++|+..+.++...+ ..++|
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999994 4567889988765421 123477999999999999887764321 12355
Q ss_pred eeecEEEecccCcccceeccCCCCeEEEEEeeeCCC--cceEEEEEEecCCCCcccCCCCCcccccceeeccCCCcccce
Q 008224 310 ECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKS 387 (573)
Q Consensus 310 ECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~--~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G~fYAs~t 387 (573)
||+++.+. .|++|..+.... ......+.+=|...+.|+..... + .+. .-.-+..
T Consensus 81 -AP~v~~~~---------------g~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~ 136 (269)
T cd08986 81 -APELHYIK---------------GRWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSL 136 (269)
T ss_pred -CceEEEEC---------------CEEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCce
Confidence 99999885 277777765431 12223333333334556532110 0 001 1233677
Q ss_pred eecCCCCcEEEE
Q 008224 388 FYDPYKKRRIVW 399 (573)
Q Consensus 388 f~d~~~~RrIl~ 399 (573)
|.|. +|+..|+
T Consensus 137 f~D~-DG~~Yl~ 147 (269)
T cd08986 137 FEDD-DGKVYLV 147 (269)
T ss_pred EEcC-CCCEEEE
Confidence 8885 5776655
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68 | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.8e-05 Score=79.63 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=98.1
Q ss_pred CcccCCcceeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-eeecc-eeccCCC--CcCCCcEEeeeEEEccCCe
Q 008224 128 NWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYLP-IAMVPDQ--WYDINGVWTGSATILPDGQ 202 (573)
Q Consensus 128 gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh-W~~lp-~AL~Pd~--~yD~~Gv~SGSavv~~dG~ 202 (573)
+-+-.|. +++.+ |+|+|||..... ..+....+.|+|+|+.. |+... ..+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455676 66777 999999987543 22356789999999976 45432 1122221 2234467888988776799
Q ss_pred EEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec----CC
Q 008224 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI----GK 278 (573)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~----~~ 278 (573)
++|+|.+........+.+|.++|. .+|++.+..+++.... ....+--|.++ + .+|+|||++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998865434466789999885 6888754222222211 22345679884 3 5799999998653 12
Q ss_pred eeEEEEEEeCC-CCCcEEc
Q 008224 279 TGISLVYQTTD-FKTYELL 296 (573)
Q Consensus 279 ~G~illY~S~D-l~~W~~~ 296 (573)
.-.+..++|++ +-.|+..
T Consensus 206 ~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 206 TYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CcceEEEEccCCCCCcccC
Confidence 22345566654 3445543
|
Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32 |
| >cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.5e-05 Score=79.33 Aligned_cols=154 Identities=15% Similarity=0.145 Sum_probs=89.3
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
.+-.|. +++.+|+|||||..+... -.....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|+|
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~~ 126 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLYY 126 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEEE
Confidence 344676 788999999999876432 134678999999977 6877653333321 34567888888789999999
Q ss_pred cccCCCC--cceEEEEEecCCCCCCcceEEEeCC---CceecC-------CCC----CCCCCCCCCeeEeecCCCcEEEE
Q 008224 208 TGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPG---NPVLVP-------PRH----IGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 208 TG~~~~~--~q~q~lA~S~D~~Dp~L~~W~K~~~---nPVl~~-------p~g----~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
+...... ...+..+.+.|. .+|..... .|+..+ +.. .+..-.=-|.+ .+ .+|+|||+
T Consensus 127 ~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ 199 (294)
T cd08991 127 SRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYLT 199 (294)
T ss_pred EecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEEE
Confidence 8754322 233444566553 45542111 122111 000 00011224666 33 57899999
Q ss_pred Eeeec-CCee-EEEEEEeCC-CCCcEEc
Q 008224 272 IGSKI-GKTG-ISLVYQTTD-FKTYELL 296 (573)
Q Consensus 272 vGs~~-~~~G-~illY~S~D-l~~W~~~ 296 (573)
..+.. .... .+.+.+|++ +-.|+..
T Consensus 200 ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 200 YSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 87532 1111 344567776 4578764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.9e-05 Score=78.40 Aligned_cols=151 Identities=15% Similarity=0.064 Sum_probs=91.9
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeeccee-ccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIA-MVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~A-L~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+..... +.+ ...+.......++++++||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455676 78899999999987643 234678999999976 79987532 322 22233456688888877899999
Q ss_pred EEcccCCCCcceEEEE-EecCCCCCCcceEEEeCCCceecCCC---CCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 206 LYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~---g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
+|.+. +.+.+| .+.| +.+|+.. ..++..+. .....-+=-|.+ ++ .+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--CcE
Confidence 99864 233444 3334 3667542 12232111 001111235777 44 6899999997642 334
Q ss_pred EEEEEeCCCC-CcEEcccc
Q 008224 282 SLVYQTTDFK-TYELLDEY 299 (573)
Q Consensus 282 illY~S~Dl~-~W~~~~~l 299 (573)
+.+.+|+++. -|+..+.+
T Consensus 201 ~~~a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 201 IAYATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEEEEcCCCCCCcccCcEE
Confidence 5555777764 46554443
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of |
| >PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety | Back alignment and domain information |
|---|
Probab=98.14 E-value=9e-06 Score=85.58 Aligned_cols=108 Identities=20% Similarity=0.295 Sum_probs=79.6
Q ss_pred CCCcEEeeeEEEccCC-eEEEEEcccCCCCcc-eEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeec
Q 008224 186 DINGVWTGSATILPDG-QIVMLYTGSTDKSVQ-VQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG 263 (573)
Q Consensus 186 D~~Gv~SGSavv~~dG-~~~~~YTG~~~~~~q-~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~ 263 (573)
....||-..|++..++ +++|+|.+....... .+.+|.|.|+ .+|++. ..||+.|...++....-||-|...
T Consensus 28 ~~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 28 EPNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp TSSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred CcceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 3567999998764444 289999887655444 7899999996 899886 479998765555556779999653
Q ss_pred CCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccc
Q 008224 264 PDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 264 ~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~ 301 (573)
+++|+|++.+.......+.+.+|+||.+|+..+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 6799999988755555677889999999999987654
|
On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B. |
| >cd08998 GH43_ABN_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00014 Score=74.89 Aligned_cols=152 Identities=17% Similarity=0.152 Sum_probs=89.4
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL--VhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
-+-.|. +++.+|+|||||..+..+. ++...++|+|+|+ -.|+..++.+.+...+.......+++++++||+++|+
T Consensus 57 ~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 57 NLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 345565 6788999999998764321 2456799999998 7999887666654332344577889888779999999
Q ss_pred EcccCCCCcceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-C---Cee-
Q 008224 207 YTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G---KTG- 280 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~---~~G- 280 (573)
|.+... .+.+|. ..|.+.+ ..|... ...++..+.. ..-.=.|++ ++ .+|+|||++.+.. . ..+
T Consensus 134 ~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-EE-eCCEEEEEEEcchhcCCCCCce
Confidence 975421 122332 2232221 222110 0012211111 112237888 44 6899999986431 1 122
Q ss_pred EEEEEEeCCCC-CcE
Q 008224 281 ISLVYQTTDFK-TYE 294 (573)
Q Consensus 281 ~illY~S~Dl~-~W~ 294 (573)
.+.+++|+++. -|+
T Consensus 203 ~v~~~~s~~~~GP~~ 217 (288)
T cd08998 203 NIRVGRSKSITGPYV 217 (288)
T ss_pred EEEEEEcCCCCCCcC
Confidence 46688898753 354
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b |
| >cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.2e-05 Score=78.90 Aligned_cols=152 Identities=18% Similarity=0.180 Sum_probs=94.6
Q ss_pred cccccccccceeeeecCCCcccCCcc-----eeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEec-CccCeeecce--ecc
Q 008224 110 TNAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSA-DLIHWLYLPI--AMV 180 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gWmNDPNG-----~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~-DLVhW~~lp~--AL~ 180 (573)
+..+..|++..-=+.|... .|.+| .+..+ |+|+|||.-+......+...-++|+|+ |+++|+..+. .+.
T Consensus 39 S~Dlv~W~~~~~al~p~~~--~d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~ 116 (298)
T cd08996 39 SKDLVHWEHLPVALAPDDP--YDSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIP 116 (298)
T ss_pred ecCccceeECCcccCCCCc--ccCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEc
Confidence 3345667654433444222 23333 34456 999999986543211234667899999 8999998753 222
Q ss_pred CCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE
Q 008224 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (573)
Q Consensus 181 Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (573)
| ...+..+.-...++. .+|+++|+|++...+....+.++.|+|+ ++|++.. ++.... +.....+=-|.+
T Consensus 117 ~-~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~~--~~~~~~-~~~~~~~EcP~l- 185 (298)
T cd08996 117 P-PDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYLG--ELLTSL-GDFGYMWECPDL- 185 (298)
T ss_pred C-CCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEcc--eecccC-CCccceEeCCcE-
Confidence 2 222345566777764 5699999999876544566788999884 8999853 442211 112234567887
Q ss_pred eecCC--CcEEEEEeee
Q 008224 261 WAGPD--GKWRLTIGSK 275 (573)
Q Consensus 261 w~~~d--G~w~MvvGs~ 275 (573)
++ -+ ++|+|+++..
T Consensus 186 ~~-l~~~~k~vL~~s~~ 201 (298)
T cd08996 186 FP-LDVEGKWVLIFSPQ 201 (298)
T ss_pred EE-ECCCCeEEEEECCC
Confidence 43 45 9999999865
|
Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal |
| >cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00016 Score=74.25 Aligned_cols=78 Identities=19% Similarity=0.234 Sum_probs=55.5
Q ss_pred CceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccC---------CCCCcee
Q 008224 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAV---------PGTGMWE 310 (573)
Q Consensus 240 nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~---------~~~GmWE 310 (573)
||||. .++.||+|+. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67873 3678999953 47899999765322234 6689999999999988776431 123588
Q ss_pred eecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 311 CVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 311 CPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+|+++... .||+|-.+..
T Consensus 70 AP~v~~~~---------------G~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD---------------GKFWLIYTAV 87 (269)
T ss_pred cceEEEEC---------------CEEEEEEecc
Confidence 99998874 2777777654
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended |
| >cd08981 GH43_2 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00015 Score=75.48 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=53.8
Q ss_pred CCCCCCeeEeecCCCcEEEEEeeecCC----eeEEEEEEeCCCCCcEEcccccccCC---CCCceeeecEEEecccCccc
Q 008224 252 KDFRDPTTAWAGPDGKWRLTIGSKIGK----TGISLVYQTTDFKTYELLDEYLHAVP---GTGMWECVDFYPVAINGSVG 324 (573)
Q Consensus 252 ~~fRDP~V~w~~~dG~w~MvvGs~~~~----~G~illY~S~Dl~~W~~~~~l~~~~~---~~GmWECPd~f~l~~~~~~g 324 (573)
..+|||+|++...+|+|||+..+.... ...+-+|+|+||++|+..+.++.... ......+|+++...
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~------ 77 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK------ 77 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC------
Confidence 468999997655689999998764211 12367999999999999888774322 12234589988764
Q ss_pred ceeccCCCCeEEEEEeeeCC
Q 008224 325 LDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 325 l~~s~~g~~~k~VL~~S~~~ 344 (573)
.||+|..+...
T Consensus 78 ---------G~yyly~s~~~ 88 (291)
T cd08981 78 ---------GRYYMFATFHN 88 (291)
T ss_pred ---------CEEEEEEEecc
Confidence 27877776543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00019 Score=74.15 Aligned_cols=78 Identities=17% Similarity=0.241 Sum_probs=55.3
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEec
Q 008224 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (573)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~ 318 (573)
.||||. .++.||.|++ .+++|||+.++. +..+.+.+|+|+||.+|+..+..+... ..++| +|+++...
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~-~~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSF-KYTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcch-hcCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 488875 2568999954 478999976532 222346799999999999988766432 23589 89998764
Q ss_pred ccCcccceeccCCCCeEEEEEeeeC
Q 008224 319 INGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 319 ~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.|++|-.+..
T Consensus 75 ---------------gkyy~yys~~ 84 (280)
T cd09002 75 ---------------GRYYIYFPAI 84 (280)
T ss_pred ---------------CEEEEEEEee
Confidence 2777777764
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs |
| >TIGR01322 scrB_fam sucrose-6-phosphate hydrolase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0005 Score=75.70 Aligned_cols=153 Identities=14% Similarity=0.149 Sum_probs=88.9
Q ss_pred cccccccceeeeecCCCc----ccCCcceeEECCEEEEEEeeCCCCCCCC-CcEEEEEEecCccCeeecc-eeccCCCCc
Q 008224 112 AMFTWQRTSFHFQPEKNW----MNDPNGPLFYKGWYHLFYQYNPDSAVWG-NITWGHAVSADLIHWLYLP-IAMVPDQWY 185 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHAvS~DLVhW~~lp-~AL~Pd~~y 185 (573)
.+..|++-.-=+.|..-| +-.++ .+..+|++||||.-+.....+. ...-++|+|+|+.+|+..+ +.|.+....
T Consensus 64 Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~ 142 (445)
T TIGR01322 64 DLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAG 142 (445)
T ss_pred CccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCC
Confidence 366776533333443322 12333 3457999999999764322232 2234689999999999876 455543221
Q ss_pred CCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCC---CCCCCCCCCCeeEee
Q 008224 186 DINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR---HIGPKDFRDPTTAWA 262 (573)
Q Consensus 186 D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~---g~~~~~fRDP~V~w~ 262 (573)
...+.-...++ ..+|+++|+|.+..........+..|+| |++|+.. .++..+.. +.....|=-|-+ +.
T Consensus 143 ~~~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPdl-f~ 213 (445)
T TIGR01322 143 YTAHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPDL-FS 213 (445)
T ss_pred CcCcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCeE-EE
Confidence 12233355554 4689999999876443323346777777 5899986 34443321 111123456766 33
Q ss_pred cCCCcEEEEEeee
Q 008224 263 GPDGKWRLTIGSK 275 (573)
Q Consensus 263 ~~dG~w~MvvGs~ 275 (573)
-+|+|+|+++..
T Consensus 214 -l~~k~vL~~s~~ 225 (445)
T TIGR01322 214 -LDGQDVLLFSPQ 225 (445)
T ss_pred -ECCcEEEEEecc
Confidence 578999998753
|
|
| >cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00095 Score=71.41 Aligned_cols=148 Identities=17% Similarity=0.175 Sum_probs=90.8
Q ss_pred ECCEEEEEEeeCCCCC---CCCCcEEEEEEecCccCee----ecceeccCCC-CcCCC-------------cEEeeeEEE
Q 008224 139 YKGWYHLFYQYNPDSA---VWGNITWGHAVSADLIHWL----YLPIAMVPDQ-WYDIN-------------GVWTGSATI 197 (573)
Q Consensus 139 ~~G~YHLFYQ~nP~~~---~wG~~~WGHAvS~DLVhW~----~lp~AL~Pd~-~yD~~-------------Gv~SGSavv 197 (573)
.+|+|||||.-+-... .--....++|+++|+..|. .....+.++. .|+.. ..=...++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 3599999999763211 1123678999999985443 3444556655 33211 122445555
Q ss_pred cc-CCeEEEEEcccCCCC---------------------------cceEEEEEecCCCCCCcceEEEeCCCceecCCCCC
Q 008224 198 LP-DGQIVMLYTGSTDKS---------------------------VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (573)
Q Consensus 198 ~~-dG~~~~~YTG~~~~~---------------------------~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~ 249 (573)
++ +|+.+|++++++... .-+++||.+++. .|.+|+-+ .|++.+. +.
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEAN-GV 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCC-Cc
Confidence 54 699999999986421 134667777643 25789976 4777542 22
Q ss_pred CCCCCCCCeeEeecCCCcEEEEEeeecC-------CeeEEEEEEeCCCC-CcEE
Q 008224 250 GPKDFRDPTTAWAGPDGKWRLTIGSKIG-------KTGISLVYQTTDFK-TYEL 295 (573)
Q Consensus 250 ~~~~fRDP~V~w~~~dG~w~MvvGs~~~-------~~G~illY~S~Dl~-~W~~ 295 (573)
...+-+|.++ + .+|+|||+..++.. +...+..|.|+++. -|+.
T Consensus 234 -~d~~E~P~v~-~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHVV-F-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceEE-E-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 2346689994 3 68999999875421 11235567888874 3443
|
Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n |
| >PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00061 Score=69.27 Aligned_cols=142 Identities=20% Similarity=0.272 Sum_probs=94.8
Q ss_pred CCcccCCcceeEEC-CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEE
Q 008224 127 KNWMNDPNGPLFYK-GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 127 ~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 204 (573)
..+.-||. ++.++ |+++|+|-..... ......+....+.|+.++...+ ..+.+.......++.-|..++..+|.++
T Consensus 116 ~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g~yY 193 (286)
T PF04616_consen 116 GGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPGGGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGGKYY 193 (286)
T ss_dssp SSSSSSEE-EEEETTSEEEEEEEESTTT-SSEEEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETTEEE
T ss_pred cccccCce-EEEecCCCcEEeCcccCCC-ccceeEEeecccCccccccCcccccccccccccCCccccceEEEEcCCCEE
Confidence 77889997 66665 9999999765443 2234567888899999998877 4455544334567888888888999999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC-CCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
|+|.+..........+|+|++. +..|+....+|++... ..-....-.-..+ +..++|+|+|+.=+.
T Consensus 194 l~~s~~~~~~~y~v~~~~s~~~----~gp~~~~~~~~~~~~~~~~~~~~g~gH~~~-~~~~~g~~~~~yh~~ 260 (286)
T PF04616_consen 194 LFYSAGGTGSPYQVGYARSDSP----LGPWEWKKGNPILFSRDGENGVYGPGHGSV-FKDPDGRWYIVYHAR 260 (286)
T ss_dssp EEEEESGSSTTTEEEEEEESST----TSGGEETTTCBCEGTTBTTSSCEEEEEEEE-EEETTSEEEEEEEEE
T ss_pred EEEeccCCCCCceEEEeeccCC----CCceeeccCCeEEEeeccCCccccCccCCE-EECCCCCEEEEEeec
Confidence 9999765443456678999876 3567776667877631 1111111112233 445678888876543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B .... |
| >cd08988 GH43_ABN Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0041 Score=64.12 Aligned_cols=144 Identities=15% Similarity=0.158 Sum_probs=79.8
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc------CeeecceeccCCCCcCCCcEEeeeEEEccCCeEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI------HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV------hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 204 (573)
.-|. +.|++|+|||||.-+..+. .....|.|+|++.. .|+...+.+.+... +......+++++++||+++
T Consensus 58 WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Y 133 (279)
T cd08988 58 WAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPW 133 (279)
T ss_pred ecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEE
Confidence 3454 6788999999998765432 23567999999853 25543344444332 2234568888888899999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCC--ceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----C
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGN--PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----G 277 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~n--PVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~ 277 (573)
|+|.... .+. +..-.+.|.... . ..+. .++..+. .....--|++ ++ .+|+|||+..+.. +
T Consensus 134 l~~g~~~-~gi--~~~eL~~d~~~~-----~-~~~~~~~i~~~~~--~~~~~Egp~i-~k-~~g~YYl~~S~g~~~~~~~ 200 (279)
T cd08988 134 LSFGSFW-GGI--KLFELDKDTMKP-----A-EPGELHSIAGRER--SSAAIEAPFI-LY-RGDYYYLFVSFGLCCRGGD 200 (279)
T ss_pred EEecccC-CCE--EEEEECcccCCc-----c-CCCcceEEeccCC--CCCceEeeEE-EE-cCCeEEEEEEcCcccCCCC
Confidence 9996432 111 122233332211 0 0111 1221110 0112235777 54 6899999876531 1
Q ss_pred CeeEEEEEEeCCCC
Q 008224 278 KTGISLVYQTTDFK 291 (573)
Q Consensus 278 ~~G~illY~S~Dl~ 291 (573)
..-.+.+++|+++.
T Consensus 201 ~~y~v~~arS~~~~ 214 (279)
T cd08988 201 STYKIAVGRSKNIT 214 (279)
T ss_pred CCeEEEEEEeCCCC
Confidence 22246678898763
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla |
| >cd08980 GH43_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0026 Score=65.56 Aligned_cols=146 Identities=16% Similarity=0.184 Sum_probs=84.0
Q ss_pred cCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec-cCCCCcCCC--cEEeeeEEEccCC
Q 008224 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM-VPDQWYDIN--GVWTGSATILPDG 201 (573)
Q Consensus 125 P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL-~Pd~~yD~~--Gv~SGSavv~~dG 201 (573)
+...+..||+ ++.++|+++|||-..-.....+.-.|....+.| ..+...+..| .|...|+.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~~~-~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMSNP-WTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECCCC-CccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4456788997 666789999998532111111222344433433 3454333333 444455544 5678888888899
Q ss_pred eEEEEEcccCC-CCcceEEEEEecCCCCCCc-ceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCc-EEEEEee
Q 008224 202 QIVMLYTGSTD-KSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGK-WRLTIGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~-~~~q~q~lA~S~D~~Dp~L-~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~-w~MvvGs 274 (573)
.++|+|.+... .....+++|+++...+++. ..|+|. .+|||.....-....---..+ ...++|+ |+|+.=+
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~g~GH~~i-v~~~~G~~~~~~yH~ 259 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVYGPGHNSF-TKSPDGTEDWIVYHA 259 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccCcCCccce-EECCCCCEEEEEEcc
Confidence 99999997653 3345567888875444322 358886 478887543100001113334 4456777 8887643
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >smart00640 Glyco_32 Glycosyl hydrolases family 32 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00096 Score=73.33 Aligned_cols=154 Identities=17% Similarity=0.209 Sum_probs=88.9
Q ss_pred ccccccccceeeeecCCCcccCCcc-----eeEECCEEEEEEeeCC-CCC--CCCCc-EEEEEEecCccCeeecc--eec
Q 008224 111 NAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYNP-DSA--VWGNI-TWGHAVSADLIHWLYLP--IAM 179 (573)
Q Consensus 111 ~~~~~w~Rp~yHf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wG~~-~WGHAvS~DLVhW~~lp--~AL 179 (573)
..+..|++..-=+.|.. + .|.+| .+..+|.|||||.-+- ... ..... .-.+|+|+|+++|+..+ +.|
T Consensus 46 ~Dlv~W~~~~~aL~P~~-~-~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi 123 (437)
T smart00640 46 KDLVHWTHLPVALAPDE-W-YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVL 123 (437)
T ss_pred CCcceeeecCcccCCCC-c-CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEE
Confidence 34666754332244543 2 35554 3445788999998652 111 12222 23678999999999873 556
Q ss_pred cCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCee
Q 008224 180 VPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTT 259 (573)
Q Consensus 180 ~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V 259 (573)
.+...+.....-...++..++|+++|++.+...+..-.+.++.|+| |++|+.. .+++.+..+.....|=.|-.
T Consensus 124 ~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~wECPdl 196 (437)
T smart00640 124 VPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMWECPDL 196 (437)
T ss_pred eCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceEECCcE
Confidence 5543222223335555444446999999876544445577888887 4899885 34543311211134556665
Q ss_pred EeecCCC-----cEEEEEeee
Q 008224 260 AWAGPDG-----KWRLTIGSK 275 (573)
Q Consensus 260 ~w~~~dG-----~w~MvvGs~ 275 (573)
+ . -++ +|+|+++..
T Consensus 197 f-~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 197 F-P-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred E-E-eCCCCCceeEEEEECcC
Confidence 3 2 234 899988765
|
|
| >cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0053 Score=62.76 Aligned_cols=138 Identities=15% Similarity=0.104 Sum_probs=80.7
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceee-cc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~-lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
=|. +++++|+|+|||.-+ ...|+|+|+|.. .|+. .+ +.+.+.. .......++++.++||+.+|+|.
T Consensus 68 AP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~~ 136 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYWG 136 (275)
T ss_pred CCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEEc
Confidence 365 788899999999864 357899999965 6876 33 2233321 22345678888778999999997
Q ss_pred ccCCCCcceEEE-EEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--CeeEEEEE
Q 008224 209 GSTDKSVQVQNL-AYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--KTGISLVY 285 (573)
Q Consensus 209 G~~~~~~q~q~l-A~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--~~G~illY 285 (573)
+.. ...+ ..+.| +.+|+.. ...+...+. .-+=-|.+ ++ .+|+|||++.+... ..-.+...
T Consensus 137 ~~~-----~~~i~~l~~d-----~~~~~~~-~~~~~~~~~----~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 137 GWG-----HCNVAKLNED-----MISFDGE-RDGSEITPK----NYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred CcC-----CEEEEEECCC-----cccccCc-ceeeeccCC----CceecceE-EE-ECCEEEEEEECCCCCCCCceEEEE
Confidence 531 1222 23444 2556432 111101111 12346777 44 68999999876421 11244456
Q ss_pred EeCCCC-CcEEcc
Q 008224 286 QTTDFK-TYELLD 297 (573)
Q Consensus 286 ~S~Dl~-~W~~~~ 297 (573)
+|++.. -|+..+
T Consensus 200 ~s~~~~GP~~~~~ 212 (275)
T cd09004 200 MADSPLGPFERPG 212 (275)
T ss_pred EcCCCCCCcccCC
Confidence 777753 365543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. |
| >COG2152 Predicted glycosylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00078 Score=70.09 Aligned_cols=115 Identities=17% Similarity=0.250 Sum_probs=84.4
Q ss_pred ccCCC--CcCCC----cEEeeeEEEccCCeEEEEEccc-----CCCCcceEEEEEecCCCCCCcce-EEEeCCCceecC-
Q 008224 179 MVPDQ--WYDIN----GVWTGSATILPDGQIVMLYTGS-----TDKSVQVQNLAYPADPSDPLLLD-WVKYPGNPVLVP- 245 (573)
Q Consensus 179 L~Pd~--~yD~~----Gv~SGSavv~~dG~~~~~YTG~-----~~~~~q~q~lA~S~D~~Dp~L~~-W~K~~~nPVl~~- 245 (573)
|.|.. .++.. .+|-++++. .++++.|+|-.. .........+|.|+|+ .+ |++.+ +|++.|
T Consensus 14 i~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P~ 86 (314)
T COG2152 14 ITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWPA 86 (314)
T ss_pred eeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEecC
Confidence 44444 34555 789998864 689999999873 2234567789999987 45 99864 799887
Q ss_pred CCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccccc
Q 008224 246 PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (573)
Q Consensus 246 p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~ 302 (573)
...++....-||-|.. .+|+|+|.+.+..+.+-...+..++|+.+|++.+.++.+
T Consensus 87 ~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 87 NYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred CCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 2234455667999953 579999999987555445668889999999999887643
|
|
| >cd08985 GH43_6 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0094 Score=61.15 Aligned_cols=146 Identities=16% Similarity=0.198 Sum_probs=86.0
Q ss_pred ccCCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 130 MNDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
+-=|. ++|+ +|+|||||..+..+ .+....|+|+|++.. .|+.++..+ |. ..+....++++++||+.+|+
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~ 136 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLL 136 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEE
Confidence 34454 5664 59999999987522 245688999998765 477665432 21 23456788888889999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC-CeeEEEEE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVY 285 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~-~~G~illY 285 (573)
|....+ +...++.-++. +..+ .+.+..... ...+-.|.+ ++ .+|.|||+...... ....+..+
T Consensus 137 ~~~~~~---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~i-~K-~~g~YYL~~S~~t~~~~~~~~y~ 200 (265)
T cd08985 137 YSDRDN---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPAI-FK-RNGKYYLLTSGLTGWNPNDARYA 200 (265)
T ss_pred EecCCC---CceEEEEeCCC----cccc---cceEEEccC----CCccccceE-EE-ECCEEEEEEccCCCccCCceEEE
Confidence 986431 23344433221 2333 223332111 123457888 54 67999999865421 11234566
Q ss_pred EeCCCC-CcEEcccc
Q 008224 286 QTTDFK-TYELLDEY 299 (573)
Q Consensus 286 ~S~Dl~-~W~~~~~l 299 (573)
+|+++. .|+..+.+
T Consensus 201 ~s~s~~GP~~~~~~~ 215 (265)
T cd08985 201 TATSILGPWTDLGNP 215 (265)
T ss_pred EecCCCCCccccCcC
Confidence 787764 56665543
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0076 Score=63.47 Aligned_cols=167 Identities=19% Similarity=0.243 Sum_probs=99.3
Q ss_pred ccccceeeeecC--CCcccCCcceeEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEecCc-cCeeecceeccCCC
Q 008224 115 TWQRTSFHFQPE--KNWMNDPNGPLFYK-GWYHLFYQYNPDSA-------VWGNITWGHAVSADL-IHWLYLPIAMVPDQ 183 (573)
Q Consensus 115 ~w~Rp~yHf~P~--~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wG~~~WGHAvS~DL-VhW~~lp~AL~Pd~ 183 (573)
.|..++.-.... ...+.||. +++.. |+-+|||...+... .+...+-.+.+|+|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 454443333322 24567897 66776 99999998877642 223456677888885 89975 43344332
Q ss_pred C-cCCCcEE--eeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE
Q 008224 184 W-YDINGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (573)
Q Consensus 184 ~-yD~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (573)
. .+....+ .|..++..+|++++.+.+....+.....+.+|+|.+ ++|+... ++ .+ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 1122233 233455678998876555433334556678898875 8997632 11 11 1233467874
Q ss_pred eecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEccc
Q 008224 261 WAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (573)
Q Consensus 261 w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~~~ 298 (573)
.-++|+.+|+..... .+...+|.|.| ...|+....
T Consensus 205 -el~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 -ELSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred -EecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 235898888765532 45666888877 489986543
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0089 Score=61.36 Aligned_cols=131 Identities=15% Similarity=0.143 Sum_probs=75.6
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEccc
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGS 210 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~ 210 (573)
-|. +.|.+|+|||||-.+. . .-+.|+|++.. .|+..+... ....+++++++||+.+|+|.+.
T Consensus 78 AP~-v~~~~gkyy~yys~~~-----~--~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~ 140 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT-----G--GTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG 140 (269)
T ss_pred CCc-eEEECCEEEEEEEecC-----C--CeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC
Confidence 454 6788999999998751 1 23567777743 676654321 3457788888899999999653
Q ss_pred CCCCcceEEEE-EecCCCCCCcceEEEeCCCce-ecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeC
Q 008224 211 TDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTT 288 (573)
Q Consensus 211 ~~~~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~ 288 (573)
.+.++ .+.|. .... ...++ +..+. ......=-|++ ++ .+|+|||++.+..+....+.+++|+
T Consensus 141 ------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 141 ------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred ------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEeC
Confidence 23333 23332 2221 11223 33221 11112336777 44 6899999987643222345578898
Q ss_pred CCC-CcEE
Q 008224 289 DFK-TYEL 295 (573)
Q Consensus 289 Dl~-~W~~ 295 (573)
++. -|+.
T Consensus 205 ~~~GP~~~ 212 (269)
T cd09001 205 SLTGPYES 212 (269)
T ss_pred CCCCCcCC
Confidence 854 3544
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.021 Score=58.82 Aligned_cols=143 Identities=16% Similarity=0.082 Sum_probs=80.6
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcc
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 209 (573)
.-|. ++|++|+|||||...... + ...-+.|+|+|.- -|++ +. +.+. .+..++++.++||+.+|+|-.
T Consensus 69 WAP~-v~~~~g~yy~yy~~~~~~--~-~~~~~v~~s~~p~gpw~~-~~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 69 WAPT-IRYHDGTFYLITTNVDGM--K-DGGNFIVTADDPAGPWSD-PV-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred Ecce-EEEECCEEEEEEEecCCC--C-CCceEEEEeCCCCCCCcC-CE-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 3465 788899999999876432 2 2345678898873 6774 22 2221 456788888779999998865
Q ss_pred cCCC----CcceEEEEEecCCCCCCcceEEEeCCCce-ecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEEE
Q 008224 210 STDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISL 283 (573)
Q Consensus 210 ~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPV-l~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~il 283 (573)
.... ..+.+.++.... ..|+- .+.++ +..... ....=-|.+ ++ .+|+|||++.+.. ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~-~~~~~~~~~~~~--~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKL-LGEPKVIWNGTG--GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCC-CCCcEEEEeCCC--CCCcccCeE-EE-ECCEEEEEEecCCCCCCeEEE
Confidence 4221 123344443321 11111 11221 111100 011235777 54 6899999986432 1223466
Q ss_pred EEEeCCCC-CcEEc
Q 008224 284 VYQTTDFK-TYELL 296 (573)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (573)
+++|+++. -|+..
T Consensus 206 ~~~s~~~~Gp~~~~ 219 (288)
T cd09000 206 VARSRSITGPYEPA 219 (288)
T ss_pred EEEeCCCCCCCccC
Confidence 88999876 67653
|
This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend |
| >cd09003 GH43_AXH_1 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.025 Score=59.51 Aligned_cols=147 Identities=12% Similarity=0.145 Sum_probs=82.5
Q ss_pred CCcceeEEC----CEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeec-ceec-cCCC-CcC-CCcEEeeeEEEccCCe
Q 008224 132 DPNGPLFYK----GWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYL-PIAM-VPDQ-WYD-INGVWTGSATILPDGQ 202 (573)
Q Consensus 132 DPNG~~y~~----G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~l-p~AL-~Pd~-~yD-~~Gv~SGSavv~~dG~ 202 (573)
-|. +++++ |+|+|||... ....|.|+|+|.. .|+.+ +..| .+.. ..+ ......+++++++||+
T Consensus 80 AP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG~ 151 (311)
T cd09003 80 APS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDGQ 151 (311)
T ss_pred CCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCCC
Confidence 354 67777 9999999532 2347999999955 79874 3222 2211 111 1124688888888999
Q ss_pred EEEEEcccCC----CCcceEEEEEec-CCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-
Q 008224 203 IVMLYTGSTD----KSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI- 276 (573)
Q Consensus 203 ~~~~YTG~~~----~~~q~q~lA~S~-D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~- 276 (573)
.+|+|.+... ...+.+.+|.-+ |. .+ ..+.++....+ ..+=-|.+ ++ .+|+|||++.+.-
T Consensus 152 ~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~---~~g~~~~i~~~----~~~Egp~~-~K-~~G~YYL~ys~~~~ 217 (311)
T cd09003 152 GYLYFGGGVPGGRWANPNTARVIKLGDDM-----IS---VDGSAVTIDAP----YFFEASGL-HK-INGTYYYSYCTNFG 217 (311)
T ss_pred EEEEECCccCCCccccCCCEEEEEeCCCc-----ee---ccCCceEccCC----CceEeeeE-EE-ECCEEEEEEeCCCC
Confidence 9999975322 112334444333 31 22 22233322111 12345777 44 6899999886531
Q ss_pred ------CCeeEEEEEEeCCCC-CcEEccccc
Q 008224 277 ------GKTGISLVYQTTDFK-TYELLDEYL 300 (573)
Q Consensus 277 ------~~~G~illY~S~Dl~-~W~~~~~l~ 300 (573)
.....+...+|++.. -|+..++++
T Consensus 218 ~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 218 GRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred ccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 223345555777643 477655544
|
This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0094 Score=60.23 Aligned_cols=149 Identities=19% Similarity=0.307 Sum_probs=89.3
Q ss_pred ccCCcceeE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE-
Q 008224 130 MNDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML- 206 (573)
Q Consensus 130 mNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~- 206 (573)
..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.+.......+...+.++...+|++++-
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~ 125 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAPY 125 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEEE
Confidence 35676 444 399999999666555555444444599999 99998754 33333222233445555566679987775
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQ 286 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~ 286 (573)
|.. ........+.+|.|.+ ++|+... ++.. ....--|.+ ....+|+.+|++-.. . .+.+.+++
T Consensus 126 ~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~-~~~~dG~l~~~~R~~-~-~~~~~~~~ 188 (275)
T PF13088_consen 126 YHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSI-VELPDGRLLAVFRTE-G-NDDIYISR 188 (275)
T ss_dssp EEE--SSCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEE-EEETTSEEEEEEEEC-S-STEEEEEE
T ss_pred eec--cccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEE-EECCCCcEEEEEEcc-C-CCcEEEEE
Confidence 443 2223566788999975 9998863 2210 011223444 334788888887553 2 22666778
Q ss_pred eCC-CCCcEEcc
Q 008224 287 TTD-FKTYELLD 297 (573)
Q Consensus 287 S~D-l~~W~~~~ 297 (573)
|.| ..+|+...
T Consensus 189 S~D~G~TWs~~~ 200 (275)
T PF13088_consen 189 STDGGRTWSPPQ 200 (275)
T ss_dssp ESSTTSS-EEEE
T ss_pred ECCCCCcCCCce
Confidence 877 79998743
|
... |
| >COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0034 Score=69.98 Aligned_cols=100 Identities=22% Similarity=0.391 Sum_probs=63.6
Q ss_pred EEEEecCccCeeecceeccCCCC-------cCCCcEEeeeEEEccCCeEEEEEcccCCCC---cceEEEEEecCCCCCCc
Q 008224 162 GHAVSADLIHWLYLPIAMVPDQW-------YDINGVWTGSATILPDGQIVMLYTGSTDKS---VQVQNLAYPADPSDPLL 231 (573)
Q Consensus 162 GHAvS~DLVhW~~lp~AL~Pd~~-------yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~Dp~L 231 (573)
.-+.|+||+||+.....|.+... -+..|||..++. .+||+++|+||-..... ....+..++++..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 34779999999988765555432 246789999986 79999999998664321 12223333332211
Q ss_pred ceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 232 LDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 232 ~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
-.|.. |+..+-. .--||.+++ ++||+-+|+.|+-
T Consensus 132 G~WsD----pi~l~~~-----~~iDPslf~-D~dGr~wlv~~~w 165 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSLFF-DKDGRKWLVNGSW 165 (549)
T ss_pred CCccc----ceecCCc-----CccCCceee-cCCCCEEEEeccc
Confidence 35643 3433221 124999954 6889988998875
|
|
| >PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.22 Score=50.79 Aligned_cols=206 Identities=15% Similarity=0.257 Sum_probs=105.5
Q ss_pred eeecCCCcc--cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE-Ec
Q 008224 122 HFQPEKNWM--NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT-IL 198 (573)
Q Consensus 122 Hf~P~~gWm--NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSav-v~ 198 (573)
-.+|..||. -||- .++|+|+||+|....-.+..||.|.. .-+-+|.....| +.. |-..+.-...++ ..
T Consensus 15 L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~f-----~~Ftdws~~~sA--~q~-~m~~~~vAP~vFYFa 85 (271)
T PF03664_consen 15 LAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMNF-----GPFTDWSQMASA--SQN-YMDQSAVAPQVFYFA 85 (271)
T ss_pred cccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEee-----eccCCHHHhhcc--ccc-cCCcccccceEEEec
Confidence 356778885 6997 89999999999987654545544433 345567765543 111 111111112222 24
Q ss_pred cCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecC-CCCCCCCCCCCCeeEeecCCCcEEEEEeeecC
Q 008224 199 PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (573)
Q Consensus 199 ~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~-p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~ 277 (573)
+....||.|--.... -...++.|.++| ..|... .|++.. ..+ .....-|..|+- .+..-||+....
T Consensus 86 Pk~~W~L~yQwg~~~----fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~-~~~g~iD~~vI~--D~~n~yLFfa~D-- 152 (271)
T PF03664_consen 86 PKNIWYLAYQWGPAA----FSYSTSSDPTNP--NGWSAP--QPLFSGSISG-SGTGPIDQWVIC--DDTNMYLFFAGD-- 152 (271)
T ss_pred CCcEEEEEEecCCCc----ceeecCCCCCCC--ccCCCC--cccccccccC-CCCCceeeEEEe--cCCceEEEEcCC--
Confidence 677788888632111 123355677766 468764 345431 111 123457888864 333445554322
Q ss_pred CeeEEEEEEeCC-CCCc----EEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEE
Q 008224 278 KTGISLVYQTTD-FKTY----ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAI 352 (573)
Q Consensus 278 ~~G~illY~S~D-l~~W----~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~i 352 (573)
.|. ||+|.= +-++ .-...+..+......+|-++.|.|... .+++|.+...+..+.||.-
T Consensus 153 -nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~-------------~~YLmiVEaiGs~gRyFRS 216 (271)
T PF03664_consen 153 -NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQ-------------NQYLMIVEAIGSDGRYFRS 216 (271)
T ss_pred -CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCC-------------ceEEEEEEEecCCCcEEEe
Confidence 243 688742 2221 100111111122348999999999632 3566665544433334332
Q ss_pred EEecCCCCcccCC
Q 008224 353 GTYNPANDKWTPD 365 (573)
Q Consensus 353 G~~d~~~~~f~pd 365 (573)
=+=..-.+.|+|.
T Consensus 217 fTa~sL~G~Wtp~ 229 (271)
T PF03664_consen 217 FTATSLDGPWTPQ 229 (271)
T ss_pred eecCCCCCcceec
Confidence 2222234567764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process |
| >cd08982 GH43_3 Glycosyl hydrolase family 43 | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.031 Score=58.39 Aligned_cols=134 Identities=15% Similarity=0.189 Sum_probs=74.6
Q ss_pred CCcccCCcceeEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceecc----CCCCcC----------CCcEE
Q 008224 127 KNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV----PDQWYD----------INGVW 191 (573)
Q Consensus 127 ~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~----Pd~~yD----------~~Gv~ 191 (573)
..+.-||+ ++.+ +|+.+|+|-.. .++ ..|+--.+.|+..=.-.+..|. |+..+. ..++.
T Consensus 88 ~~~~IDp~-vf~DdDGk~Yl~~g~~----~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~ 161 (295)
T cd08982 88 PPGLADPA-LFIDDDGRLYLYYGCS----NNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWM 161 (295)
T ss_pred CCCccCCc-eEECCCCCEEEEEecC----CCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccc
Confidence 45678997 6665 59999998421 111 1344444555442222222221 111221 23466
Q ss_pred eeeEEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEE
Q 008224 192 TGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRL 270 (573)
Q Consensus 192 SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~M 270 (573)
-|..++..+|+++|+|+..... ....+.+|+|++. +..|++...|||+..+.+. ...--...+ ...++|+|++
T Consensus 162 EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~~~~ 235 (295)
T cd08982 162 EGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGNYWH 235 (295)
T ss_pred cccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccE-EECCCCCEEE
Confidence 7888878899999999864322 2235678888765 4567776678988643221 001112223 3456788887
Q ss_pred EE
Q 008224 271 TI 272 (573)
Q Consensus 271 vv 272 (573)
+.
T Consensus 236 ~y 237 (295)
T cd08982 236 VG 237 (295)
T ss_pred EE
Confidence 75
|
This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e |
| >PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.12 Score=52.27 Aligned_cols=146 Identities=17% Similarity=0.089 Sum_probs=78.9
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--cCc-cCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCC---
Q 008224 141 GWYHLFYQYNPDSAVWGNITWGHAVS--ADL-IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS--- 214 (573)
Q Consensus 141 G~YHLFYQ~nP~~~~wG~~~WGHAvS--~DL-VhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~--- 214 (573)
|....|+.- +...+...-.-.+| +|. .+|...-....+. .....+..++++.+++|++++||+......
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 455566655 33334444444444 886 7898754444333 223567777777778999999995443221
Q ss_pred cceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCc
Q 008224 215 VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTY 293 (573)
Q Consensus 215 ~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W 293 (573)
.......+|.|.+ ++|.... .|...+........+.+-+. -.+|++++..-........+.++.|+| .+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1222238999975 9999863 23222111111122333222 258888776322222334455555555 7899
Q ss_pred EEcccc
Q 008224 294 ELLDEY 299 (573)
Q Consensus 294 ~~~~~l 299 (573)
+....+
T Consensus 148 ~~~~~~ 153 (275)
T PF13088_consen 148 SSGSPI 153 (275)
T ss_dssp EEEEEC
T ss_pred eccccc
Confidence 986554
|
... |
| >cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.21 Score=52.43 Aligned_cols=142 Identities=12% Similarity=0.160 Sum_probs=77.0
Q ss_pred CCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCccC---eeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 132 DPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLIH---WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 132 DPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh---W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
-|. ++|+ +++|.||||+.+ ...++|+|..+ |....+.......-...|...-.+ |.+|++++||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLf 148 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLF 148 (303)
T ss_pred cCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEE
Confidence 565 5655 599999999722 35799999765 765433332221112234445555 6789999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCC--cEEEEEeeecCCeeE-EE
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG--KWRLTIGSKIGKTGI-SL 283 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG--~w~MvvGs~~~~~G~-il 283 (573)
|.+.+. .+..|-... ..|-....+++....+.....-|--|.| .+ .+| +|+|++-+.....+. ..
T Consensus 149 f~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYfr 216 (303)
T cd08987 149 FSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYFR 216 (303)
T ss_pred EecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeEE
Confidence 987532 233332221 1122111122222111111244667888 54 444 999999775321221 22
Q ss_pred EEEeCCCC-CcEEc
Q 008224 284 VYQTTDFK-TYELL 296 (573)
Q Consensus 284 lY~S~Dl~-~W~~~ 296 (573)
-++|++|. .|+..
T Consensus 217 s~Ts~Sl~GpWt~~ 230 (303)
T cd08987 217 SWTATSLDGPWTPL 230 (303)
T ss_pred EEEcCCCCCCceec
Confidence 36777765 78876
|
The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr |
| >PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure [] | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.25 Score=51.75 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=78.1
Q ss_pred cccccccccceeeeecCCCcccCCcce-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-cCccCeeecc---eecc
Q 008224 110 TNAMFTWQRTSFHFQPEKNWMNDPNGP-----LFYKGWYHLFYQYNPDSAVWGNITWGHAVS-ADLIHWLYLP---IAMV 180 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gWmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS-~DLVhW~~lp---~AL~ 180 (573)
+..++.|++..-=+.|. ++ .|.+|+ +..++.+|+||.-+-... ...-..|+| .|.+||+..+ ++|.
T Consensus 45 S~Dlv~W~~~~~aL~P~-~~-~d~~g~~SGs~~~~~~~~~~~YTg~~~~~---~~~q~~A~s~d~~~~w~k~~~~~pvi~ 119 (308)
T PF00251_consen 45 SKDLVHWEHLPVALPPD-EE-YDADGCFSGSAVVDDDNLVLFYTGNNRDG---KQVQCLAYSTDDGITWTKYPQGNPVIP 119 (308)
T ss_dssp ESSSSSEEEEEEEE-SS-SG-GGTTEEEEEEEEEETTCEEEEEEEEETTT---EEEEEEEEESSTTSSEEE-TTTCESBE
T ss_pred CCCCCCceeCCceEccc-cc-CCcCccCcceEEEECCEEEEEEeccCCCC---CeEEEEEEECCCCCceEEcCCCCcEEE
Confidence 34467787665555555 33 577773 335889999998765421 345677999 8899999843 4454
Q ss_pred CCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEe
Q 008224 181 PDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 181 Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
.....+..+.-...++..++|+++|+..+... ....+.+..|+| |++|+..
T Consensus 120 ~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~ 170 (308)
T PF00251_consen 120 EPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDD-----LIHWEYL 170 (308)
T ss_dssp SSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESS-----SSSEEEE
T ss_pred ecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCC-----cccCcee
Confidence 22222566777888866678999998877654 444566778877 4899986
|
; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A .... |
| >PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32 | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.12 Score=43.65 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=30.1
Q ss_pred CcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCC
Q 008224 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFV 549 (573)
Q Consensus 508 gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs 549 (573)
++|||.++++++..|+|.|+|+.. ...+|.|+++|+
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~------~~~l~vDR~~s~ 44 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPA------NGTLTVDRTNSG 44 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETT------TTEEEEEETTSS
T ss_pred CCeEEEEEECCCccEEEEEEEECC------CCEEEEeCCCCc
Confidence 469999999999999999999632 235668999999
|
It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B .... |
| >PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A | Back alignment and domain information |
|---|
Probab=91.29 E-value=0.83 Score=48.42 Aligned_cols=88 Identities=25% Similarity=0.475 Sum_probs=49.9
Q ss_pred eeEEEccCCeEEEEEcccCCCCc-ceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE-eecCCCcEEE
Q 008224 193 GSATILPDGQIVMLYTGSTDKSV-QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWRL 270 (573)
Q Consensus 193 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~dG~w~M 270 (573)
||-|+.+||++++=-.+...++. .+-.|-||+|.+ .+|+-..+. .....+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg~---------s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKGM---------SPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEecccc---------CCCCcceEEEEec--cCCeeEE
Confidence 44456689998877777655555 366788999864 899875432 22456899987 5 4788888
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCcEEccc
Q 008224 271 TIGSKIGKTGISLVYQTTDF-KTYELLDE 298 (573)
Q Consensus 271 vvGs~~~~~G~illY~S~Dl-~~W~~~~~ 298 (573)
+.... .|.--+|+|.|+ ..|+..-.
T Consensus 189 ~~~c~---~g~rrVYeS~DmG~tWtea~g 214 (310)
T PF13859_consen 189 MTACD---DGRRRVYESGDMGTTWTEALG 214 (310)
T ss_dssp EEE-T---TS---EEEESSTTSS-EE-TT
T ss_pred EEecc---cceEEEEEEcccceehhhccC
Confidence 76542 244458999885 67997433
|
|
| >cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions | Back alignment and domain information |
|---|
Probab=91.00 E-value=10 Score=39.83 Aligned_cols=148 Identities=15% Similarity=0.155 Sum_probs=82.4
Q ss_pred CcEEEEEEecC-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCC----------CcceEEEEEecCC
Q 008224 158 NITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK----------SVQVQNLAYPADP 226 (573)
Q Consensus 158 ~~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 226 (573)
.+...-+.|.| ..+|... .++..... ....++..+.+.+.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 46667788887 6899885 44444332 2356788888776559999999765421 2345778889887
Q ss_pred CCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCCcEEEEEeeecCC--eeEEEEEEeCCCCCcEEccccccc
Q 008224 227 SDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK--TGISLVYQTTDFKTYELLDEYLHA 302 (573)
Q Consensus 227 ~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~--~G~illY~S~Dl~~W~~~~~l~~~ 302 (573)
+ .+|.+.. .+.... ..+ ..-++-|--.-.-.+|+++|.+-..... .-..++|..++.+.|+..... ..
T Consensus 123 G----~tW~~p~--~l~~~~~~~~~-~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~-~~ 194 (351)
T cd00260 123 G----ITWSSPR--DLTPSVKGDNW-AALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEGV-ND 194 (351)
T ss_pred C----ceecCCc--cCCccccCcce-eEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCCC-CC
Confidence 5 8998632 222111 011 1112333100112478887776443221 223445555567999864322 11
Q ss_pred CCCCCceeeecEEEec
Q 008224 303 VPGTGMWECVDFYPVA 318 (573)
Q Consensus 303 ~~~~GmWECPd~f~l~ 318 (573)
..++.| |.++++.
T Consensus 195 --~~~~~e-~~i~el~ 207 (351)
T cd00260 195 --AGGCSE-CSVVELS 207 (351)
T ss_pred --CCCCcC-CEEEEec
Confidence 133456 5577775
|
They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. |
| >COG3940 Predicted beta-xylosidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.42 E-value=2.5 Score=42.58 Aligned_cols=103 Identities=27% Similarity=0.539 Sum_probs=65.6
Q ss_pred eeEECC-EEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec--ceecc-CCCCcCCCcEE--eeeEEEccCCeEEEEEcc
Q 008224 136 PLFYKG-WYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL--PIAMV-PDQWYDINGVW--TGSATILPDGQIVMLYTG 209 (573)
Q Consensus 136 ~~y~~G-~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~l--p~AL~-Pd~~yD~~Gv~--SGSavv~~dG~~~~~YTG 209 (573)
.++++| .|.++-|..|.-. |+.....|.-.+- |+-. |+.|. |.-.|+..|.| -|-||+..+|++.+-|..
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemenp--wtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMENP--WTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccCC--ceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 456666 6888889888643 4444445544443 6543 45454 33366677876 788988899999999998
Q ss_pred cCCCCcceEEEEEec---CCCCCCcceEEEeCCCceecC
Q 008224 210 STDKSVQVQNLAYPA---DPSDPLLLDWVKYPGNPVLVP 245 (573)
Q Consensus 210 ~~~~~~q~q~lA~S~---D~~Dp~L~~W~K~~~nPVl~~ 245 (573)
...+-.-..+|-+.. |.-|| ..|+|.+ .||+..
T Consensus 213 satd~nycmgllwanen~dlldp--aswtksp-tpvf~t 248 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFKT 248 (324)
T ss_pred cccccceeeeeeeecccCCcCCc--hhcccCC-Ccceee
Confidence 754433444443332 33344 5899975 788864
|
|
| >PF13810 DUF4185: Domain of unknown function (DUF4185) | Back alignment and domain information |
|---|
Probab=83.71 E-value=22 Score=37.90 Aligned_cols=160 Identities=20% Similarity=0.185 Sum_probs=88.8
Q ss_pred cccCCcceeEECCEEEEEEeeCCC-C---CCCCCcEEEEEEecC-ccCeeecceeccCCCCcCCCcE------EeeeEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPD-S---AVWGNITWGHAVSAD-LIHWLYLPIAMVPDQWYDINGV------WTGSATI 197 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~-~---~~wG~~~WGHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv------~SGSavv 197 (573)
+-==|.+.|-.+|+-+|.|+..-. + ..|..-.=+.|.|+| .-+|+..+.++.+.... ..|+ |.=++..
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~-~~g~~~~~~~fq~~a~~ 171 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPF-HPGFNQGNWNFQMAAFV 171 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCcccccccc-cCCcccccccccccccc
Confidence 333478888889998899875411 1 123222337899999 88999998666655411 1121 2222333
Q ss_pred ccCCeEEEEEcccCCCCcceEEEEEec--CCCCCC------cce--EEEeC--CCceecCCCCCCCCCCCCCeeEeecCC
Q 008224 198 LPDGQIVMLYTGSTDKSVQVQNLAYPA--DPSDPL------LLD--WVKYP--GNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 198 ~~dG~~~~~YTG~~~~~~q~q~lA~S~--D~~Dp~------L~~--W~K~~--~nPVl~~p~g~~~~~fRDP~V~w~~~d 265 (573)
..||-+|+|=|...+. ....||.-. +..|+. ... |.+.. ..||+..+- ---.|.|.+..
T Consensus 172 ~~dgyVYv~gt~~~R~--g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~v-------gElSv~~~~~~ 242 (316)
T PF13810_consen 172 KDDGYVYVYGTPFGRN--GGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPV-------GELSVRYNEYL 242 (316)
T ss_pred CCCCEEEEEeCCCCCC--CcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCc-------cceEEEEeCCC
Confidence 4677777776654432 223344321 111210 122 65532 136654332 23366787778
Q ss_pred CcEEEEEeeecCCeeEEEEEEeCCCC-CcEEccccc
Q 008224 266 GKWRLTIGSKIGKTGISLVYQTTDFK-TYELLDEYL 300 (573)
Q Consensus 266 G~w~MvvGs~~~~~G~illY~S~Dl~-~W~~~~~l~ 300 (573)
|+|+|+.... ..+.|.+.++++.. .|+....+.
T Consensus 243 gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l~ 276 (316)
T PF13810_consen 243 GKWVLSYFDA--GTGGIVLRTAPSPTGPWSEPKPLV 276 (316)
T ss_pred CEEEEEEecc--cCCcEEEEecCCCCCCCCCCeeEE
Confidence 9999997642 23456677777776 587544443
|
|
| >PTZ00334 trans-sialidase; Provisional | Back alignment and domain information |
|---|
Probab=80.77 E-value=9.8 Score=45.16 Aligned_cols=149 Identities=18% Similarity=0.312 Sum_probs=82.5
Q ss_pred ccCCcceeEECCEEEEE--EeeCCC--------CCCCC-CcEEEEEEec-----CccCeeecceeccCCC-CcCC---Cc
Q 008224 130 MNDPNGPLFYKGWYHLF--YQYNPD--------SAVWG-NITWGHAVSA-----DLIHWLYLPIAMVPDQ-WYDI---NG 189 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLF--YQ~nP~--------~~~wG-~~~WGHAvS~-----DLVhW~~lp~AL~Pd~-~yD~---~G 189 (573)
.-.|--++.-+..|=|- |-.+.. ...|+ ...+|+++-. .-|+|.+. ..|.... .... .+
T Consensus 179 v~rPTTvvKGn~VfmLvG~y~~~~~~~~~~~~~~~~~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~ 257 (780)
T PTZ00334 179 VSRPTTVVNGSDIYMFAGTYSFEVTDKAGNTAAAAKWGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTR 257 (780)
T ss_pred ccCCeEEeeCCEEEEEecccccccccccccccccCCCccEEEEEEeecCCCCCcceEECcCc-ccCCcccccccccccee
Confidence 34566555555556555 311111 12344 3678888632 35999773 2331111 1011 11
Q ss_pred EE--eeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE-eecCCC
Q 008224 190 VW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDG 266 (573)
Q Consensus 190 v~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~dG 266 (573)
.+ =||.|+.+||++++=-.+...++..+-.|-||+|.+ +|+-..+ ....+.+||.|. | ++|
T Consensus 258 ~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~g---------~s~~gC~~P~I~EW--e~g 321 (780)
T PTZ00334 258 LIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSKG---------MSADGCSDPSVVEW--KEG 321 (780)
T ss_pred ecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcCC---------CCCCCCCCCEEEEE--cCC
Confidence 11 244455689998765556544444455678898852 5854322 223467899986 5 357
Q ss_pred cEEEEEeeecCCeeEEEEEEeCCC-CCcEEccc
Q 008224 267 KWRLTIGSKIGKTGISLVYQTTDF-KTYELLDE 298 (573)
Q Consensus 267 ~w~MvvGs~~~~~G~illY~S~Dl-~~W~~~~~ 298 (573)
+-.|+.... .|.--+|+|.|. ..|+..-.
T Consensus 322 kLlM~t~C~---dG~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 322 KLMMMTACD---DGRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred eEEEEEEeC---CCCEEEEEECCCCCChhhCCC
Confidence 877776543 244458999995 67986433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 573 | ||||
| 3ugf_A | 546 | Crystal Structure Of A 6-Sst6-Sft From Pachysandra | 1e-167 | ||
| 2ac1_A | 541 | Crystal Structure Of A Cell-Wall Invertase From Ara | 1e-113 | ||
| 2xqr_A | 537 | Crystal Structure Of Plant Cell Wall Invertase In C | 1e-113 | ||
| 2oxb_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203q) | 1e-113 | ||
| 2qqv_A | 537 | Crystal Structure Of A Cell-Wall Invertase (E203a) | 1e-113 | ||
| 2qqu_A | 535 | Crystal Structure Of A Cell-Wall Invertase (D239a) | 1e-113 | ||
| 2qqw_A | 537 | Crystal Structure Of A Cell-Wall Invertase (D23a) F | 1e-112 | ||
| 1st8_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia Fro | 1e-110 | ||
| 2aez_A | 543 | Crystal Structure Of Fructan 1-Exohydrolase Iia (E2 | 1e-110 | ||
| 1uyp_A | 432 | The Three-Dimensional Structure Of Beta-Fructosidas | 6e-36 | ||
| 1w2t_A | 432 | Beta-Fructosidase From Thermotoga Maritima In Compl | 2e-35 | ||
| 1y9m_A | 518 | Crystal Structure Of Exo-Inulinase From Aspergillus | 8e-28 | ||
| 3pig_A | 526 | Beta-Fructofuranosidase From Bifidobacterium Longum | 3e-27 | ||
| 3kf5_A | 512 | Structure Of Invertase From Schwanniomyces Occident | 3e-21 | ||
| 3kf3_A | 509 | Structure Of Fructofuranosidase From Schwanniomyces | 3e-21 | ||
| 3u75_A | 535 | Structure Of E230a-Fructofuranosidase From Schwanni | 7e-21 | ||
| 3sc7_X | 516 | First Crystal Structure Of An Endo-Inulinase, From | 7e-21 | ||
| 3u14_A | 535 | Structure Of D50a-Fructofuranosidase From Schwannio | 2e-20 | ||
| 4fff_A | 490 | Crystal Structure Of Levan Fructotransferase From A | 1e-06 | ||
| 4ffg_A | 492 | Crystal Structure Of Levan Fructotransferase From A | 1e-06 | ||
| 4ffh_A | 492 | Crystal Structure Of Levan Fructotransferase D54n M | 5e-06 |
| >pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis Length = 546 | Back alignment and structure |
|
| >pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From Arabidopsis Thaliana Length = 541 | Back alignment and structure |
|
| >pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor Length = 537 | Back alignment and structure |
|
| >pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From Arabidopsis Thaliana In Complex With Sucrose Length = 535 | Back alignment and structure |
|
| >pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From Arabidopsis Thaliana In Complex With Sucrose Length = 537 | Back alignment and structure |
|
| >pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From Cichorium Intybus Length = 543 | Back alignment and structure |
|
| >pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q) From Cichorium Intybus In Complex With 1-Kestose Length = 543 | Back alignment and structure |
|
| >pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase (Invertase) From Thermotoga Maritima Length = 432 | Back alignment and structure |
|
| >pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With Raffinose Length = 432 | Back alignment and structure |
|
| >pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus Awamori In Spacegroup P212121 Length = 518 | Back alignment and structure |
|
| >pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum Length = 526 | Back alignment and structure |
|
| >pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis Length = 512 | Back alignment and structure |
|
| >pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructose Length = 509 | Back alignment and structure |
|
| >pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Fructosylnystose Length = 535 | Back alignment and structure |
|
| >pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From Aspergillus Ficuum: Structural Analysis And Comparison With Other Gh32 Enzymes. Length = 516 | Back alignment and structure |
|
| >pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces Occidentalis Complexed With Inulin Length = 535 | Back alignment and structure |
|
| >pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens Length = 490 | Back alignment and structure |
|
| >pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From Arthrobacter Ureafaciens In Complex With Dfa-Iv Length = 492 | Back alignment and structure |
|
| >pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant From Arthrobacter Ureafaciens In Complex With Sucrose Length = 492 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 573 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 0.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 0.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 0.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 1e-162 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 1e-150 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 1e-150 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 1e-140 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 1e-135 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 1e-132 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 1e-100 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 1e-15 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 1e-11 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 1e-10 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 1e-10 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 2e-10 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 3e-08 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 3e-07 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 1e-04 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 3e-04 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* Length = 546 | Back alignment and structure |
|---|
Score = 608 bits (1569), Expect = 0.0
Identities = 277/448 (61%), Positives = 350/448 (78%), Gaps = 6/448 (1%)
Query: 106 SYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAV 165
Y W+NA +WQRT+FHFQPE++WM+DP+GP+FYKGWYH FYQYNPD+ VWGN TWGH V
Sbjct: 7 PYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTV 66
Query: 166 SADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPAD 225
S DLIHWLYLP+A+ DQWYD+ GV++GSAT LPDG+I+MLYTG T + V++ +LAYPAD
Sbjct: 67 SRDLIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPAD 126
Query: 226 PSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285
SDPLL++WVKYPGNP+L P + P +FRD +T W +G WR+ IG+K TGI++VY
Sbjct: 127 LSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVY 186
Query: 286 QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345
+T DFK+++LL+E LHAVP TG+WECVD YPV+ G GL+TS GP +KHVLKAS+D+
Sbjct: 187 ETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQ 246
Query: 346 KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINET 405
+ D+YAIGTY+ +KWTPDNPEEDVGIGL++D+G+YYASK+FYDP K+RR+VW W E
Sbjct: 247 QRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKEL 306
Query: 406 DTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVV 465
D+E D EKGWA+VQTIPRTVL D KTG+NV+ WPVEE+ESLR +S F +V GSVV
Sbjct: 307 DSEVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVV 366
Query: 466 PLDIGVATQLDISAEFE---TELLGSGAMEEGYGC--SGGAIDRSAMGPFGLLVNAHDSL 520
PLD+G ATQLDI AEFE L G+ + GY C SGGA +R +GPFGLLV+A ++L
Sbjct: 367 PLDVGTATQLDIIAEFEIDKEALEGTIEADMGYNCTTSGGAAERGVLGPFGLLVSATENL 426
Query: 521 SELTPIFFRSSNTTKGT-NTYFCADETR 547
SE TP++F + T G T+FC DE+R
Sbjct: 427 SEQTPVYFYIAKGTDGNFKTFFCLDESR 454
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* Length = 543 | Back alignment and structure |
|---|
Score = 577 bits (1489), Expect = 0.0
Identities = 203/447 (45%), Positives = 279/447 (62%), Gaps = 14/447 (3%)
Query: 112 AMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLI 170
+ RT +HFQP NWMNDPNGP+ Y+G YH FYQYNP +A +G+ I WGHAVS DL+
Sbjct: 2 QIEQPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLV 61
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPL 230
+W++L A+ P Q D W+GSATILP MLYTGS KS QVQ+LA+P + SDP
Sbjct: 62 NWIHLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPF 121
Query: 231 LLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 290
L +WVK+P NP++ PP + FRDP+TAW GPDG WR+ +G G++ +YQ+TDF
Sbjct: 122 LREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDF 181
Query: 291 KTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350
++ D+ L + TG WEC DFYPV +N + GLDTS G ++HV+KA + D Y
Sbjct: 182 VNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGFEGH--DWY 239
Query: 351 AIGTYNPANDKWTPDNPEEDVG--IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTE 408
IGTY+P + + P N G + L++DYG++YASKSF+D K RR++W W+ ETD++
Sbjct: 240 TIGTYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQ 299
Query: 409 SDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD 468
+DD+EKGWA +Q+ PR + D + G ++QWPVEEIE LRQN + ++PGSV+ +
Sbjct: 300 ADDIEKGWAGLQSFPRALWID-RNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIH 358
Query: 469 IGVATQLDISAEFETE-------LLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLS 521
A+Q D++ F+ E L + + GA R A+GPFGLL A L
Sbjct: 359 GIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLK 418
Query: 522 ELTPIFFRSSNTTKGT-NTYFCADETR 547
E + IFFR G + C+D +R
Sbjct: 419 EQSAIFFRVFQNQLGRYSVLMCSDLSR 445
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* Length = 541 | Back alignment and structure |
|---|
Score = 570 bits (1471), Expect = 0.0
Identities = 212/454 (46%), Positives = 286/454 (62%), Gaps = 17/454 (3%)
Query: 110 TNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL 169
+ ++ RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP AVWGNI W H+ S DL
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDL 60
Query: 170 IHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDP 229
I+W P A+ P +DING W+GSATILP+G+ V+LYTG K+ QVQN+A P + SDP
Sbjct: 61 INWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 120
Query: 230 LLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQT 287
L +W K P NP++ P I FRDPTTAW G D KWR+ IGSKI + G+++ Y +
Sbjct: 121 YLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTS 180
Query: 288 TDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGP---GIKHVLKASLDD 344
DF +E E LH G+GMWEC DF+PV GS G++TS+ G +KHVLK SLDD
Sbjct: 181 KDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDD 240
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINE 404
TK D+Y IGTY+ DK+ PDN + G ++DYG+YYASK+F+D K RRI+WGW NE
Sbjct: 241 TKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNE 300
Query: 405 TDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTV-FEEVVVEPGS 463
+ + DD+EKGW+ +QTIPR + D ++G ++QWPV E+E LR V++ GS
Sbjct: 301 SSSVEDDVEKGWSGIQTIPRKIWLD-RSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 464 VVPLDIGVATQLDISAEFE------TELLGSGAMEEGYGCS-GGAIDRSAMGPFGLLVNA 516
+ + A Q D+ F+ +++ + CS +S +GPFGL+V A
Sbjct: 360 RLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLA 419
Query: 517 HDSLSELTPIFFRSSNTTKGTNTY---FCADETR 547
+L E T ++FR + +N Y C+D++R
Sbjct: 420 SKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSR 453
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* Length = 518 | Back alignment and structure |
|---|
Score = 471 bits (1214), Expect = e-162
Identities = 103/454 (22%), Positives = 169/454 (37%), Gaps = 72/454 (15%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL 175
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW
Sbjct: 6 PYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEK 65
Query: 176 PIAMVPDQWYD--INGVWTGSATILPDG----------QIVMLYTG------------ST 211
P+A++ + ++GSA + +V +YT +
Sbjct: 66 PVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTV 125
Query: 212 DKSVQVQNLAYPADPSDPLLLDWVKYP-GNPVLVPPRH---IGPKDFRDPTTAWAGPDGK 267
+ Q Q++AY D L W Y NPV+ P ++FRDP W K
Sbjct: 126 QEDQQSQSIAYSLDD----GLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQK 181
Query: 268 WRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDT 327
W + I + +Y + + K ++L+ E+ G+WEC + ++
Sbjct: 182 WVVVTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS------ 233
Query: 328 SATGPGIKHVLKASLDDTKV-------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG 380
G K V+ + L+ Y +G ++ D D+G
Sbjct: 234 ---GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWG 290
Query: 381 R-YYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQ 438
+YA+ + + GW+N ++ W S IPR + L + + +VQ
Sbjct: 291 PDFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQ 350
Query: 439 WPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCS 498
P E S+ ++ + F
Sbjct: 351 QPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSFSA--------------- 395
Query: 499 GGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSN 532
+S F + + A + +E T + + +
Sbjct: 396 -----KSKASTFAIALRASANFTEQTLVGYDFAK 424
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} Length = 516 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-150
Identities = 104/480 (21%), Positives = 173/480 (36%), Gaps = 85/480 (17%)
Query: 98 HLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWG 157
+ G + A R S+HF P++ WMN+PNG + +HLF+Q+NP + VWG
Sbjct: 9 MVWMTCLGLTLPSQAQSNDYRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWG 68
Query: 158 NITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDG----------QIVMLY 207
NI WGHA S DL+HW + P A+ + + +TG+A P+ + +
Sbjct: 69 NICWGHATSTDLMHWAHKPTAIADENGVEA---FTGTAYYDPNNTSGLGDSANPPYLAWF 125
Query: 208 TGSTDKS-VQVQNLAYPADPSDPLLLDWVKYPGNPVL-----VPPRHIGPKDFRDPTTAW 261
TG T S Q Q LA+ D W K+ GNP++ P G + RDP +
Sbjct: 126 TGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFF 181
Query: 262 AGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPG-----TGMWECVDFYP 316
G W + + G + + D + + WE D +
Sbjct: 182 HRQSGNWIMVLAH--GGQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFE 239
Query: 317 VAINGSVGLDTSATGPGIKHVLKASLDDTKVD-----HYAIGTYNPANDKWTPDNPEEDV 371
+ + G+ V+ + + G+++ + P +
Sbjct: 240 LPVEGT---------EETTWVVMMTPAEGSPAGGNGVLAITGSFDGKSFTADPVDAS--- 287
Query: 372 GIGLKWDYG-RYYASKSFYD--PYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-L 427
+ D G + + S+ + RRI+ +N + W + + PRT+ L
Sbjct: 288 --TMWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSYGSNPPT--TTWKGMLSFPRTLSL 343
Query: 428 YDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLG 487
T + VQ P+ E++++ + + + PG + I T LD+ F
Sbjct: 344 KKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTLLSSIR-GTALDVRVAFYP---- 398
Query: 488 SGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETR 547
A L V SE T I + S+ T D T
Sbjct: 399 -----------------DAGSVLSLAV--RKGASEQTVIKYTQSDAT------LSVDRTE 433
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* Length = 526 | Back alignment and structure |
|---|
Score = 440 bits (1133), Expect = e-150
Identities = 105/431 (24%), Positives = 165/431 (38%), Gaps = 56/431 (12%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+H W+NDPNG FYKG +H+FYQ +P WG + WGH S D+++W PI
Sbjct: 40 YPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPI 99
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTG--------STDKSVQVQNLAYPADPSDP 229
P + +GV++GSA I +G + YTG +T QVQ A P +
Sbjct: 100 MFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE-- 157
Query: 230 LLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTT 288
++ P +RDP W +T G K G ++ +
Sbjct: 158 ---LTSATKQGMIIDCPTDKVDHHYRDPKVWK--TGDTWYMTFGVSSADKRGQMWLFSSK 212
Query: 289 DFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVG---LDTSATGPGIKHVLKASLDD 344
D +E H P M EC DF P+ + SA G + ++ +
Sbjct: 213 DMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSN 272
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWIN 403
Y IGT+ P ++ P+ WD G YYA +SF R+IV+GW++
Sbjct: 273 A---GYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFNV--DGRQIVYGWMS 320
Query: 404 ETDTESDDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGS 463
+ GW T+PR + + +VV PV E+E LR+++ V ++
Sbjct: 321 PFVQPIPMEDDGWCGQLTLPREITLGDDG--DVVTAPVAEMEGLREDTLDHGSVTLDMDG 378
Query: 464 VVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSEL 523
+ A ++I + + S GL ++A
Sbjct: 379 EQIIADD-AEAVEIEMTID-------------------LAASTAERAGLKIHA-TEDGAY 417
Query: 524 TPIFFRSSNTT 534
T + +
Sbjct: 418 TYVAYDGQIGR 428
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* Length = 432 | Back alignment and structure |
|---|
Score = 412 bits (1061), Expect = e-140
Identities = 118/405 (29%), Positives = 186/405 (45%), Gaps = 59/405 (14%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+ ++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKS-----VQVQNLAYPADPSDPLLL 232
A+ PD + +GV++GSA + DG++ ++YT D + + Q + + L
Sbjct: 63 ALYPDD--ETHGVFSGSA-VEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSEN-----GL 114
Query: 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFK 291
D+VKY GNPV+ P G FRDP +G+WR+ +GS K G L+Y + D
Sbjct: 115 DFVKYDGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLF 172
Query: 292 TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYA 351
++ + T +C D + G K +L S+ T ++
Sbjct: 173 HWKYEGA-IFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLFS 216
Query: 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTES- 409
+G K + D+G +YA+++F+ R +V GW+
Sbjct: 217 MGELKE--GKLNVEKRGL-------LDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGL 265
Query: 410 -DDLEKGWASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLD 468
+GW V ++PR + +N + PV+E+ +LR+ +V S L
Sbjct: 266 YPTKREGWNGVMSLPRELYVENN---ELKVKPVDELLALRKR-----KVFETAKSGTFLL 317
Query: 469 IGVATQLDISAEFETEL---LGSGAMEEGYGCSGG--AIDRSAMG 508
+I EF E+ +G+ + E S +D + G
Sbjct: 318 DVKENSYEIVCEFSGEIELRMGNESEEVVITKSRDELIVDTTRSG 362
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A Length = 492 | Back alignment and structure |
|---|
Score = 402 bits (1035), Expect = e-135
Identities = 83/467 (17%), Positives = 152/467 (32%), Gaps = 86/467 (18%)
Query: 121 FHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMV 180
+H P W+ +P P+ G Y L+Y ++ + G W HA + D + + + M
Sbjct: 4 YHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQN--NGPGGWDHASTTDGVAFTHHGTVMP 61
Query: 181 PDQWYDINGVWTGSATI-------LPDGQIVMLYTGSTD--KSVQVQNLAYPADP----- 226
+ + W+GSA + G +V L T TD + Q Q L + D
Sbjct: 62 LRPDFPV---WSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGGFTFT 118
Query: 227 --SDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284
DP++++ G P + FRDP W G+W IG +
Sbjct: 119 ALPDPVIVNT---DGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIGRL----RYAAF 171
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344
Y + + + + L + + G EC D + + + VL AS+D
Sbjct: 172 YTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITAD----------DGTRHWVLAASMDA 221
Query: 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSF--YDPYKKRRIVWGW 401
+ Y W + D D+G +YA+ ++ D + +R+ W
Sbjct: 222 YGIGLPMTYAY--WTGTWDGEQFHADDLTPQWLDWGWDWYAAVTWPSIDAPETKRLAIAW 279
Query: 402 INETDTESDDL----EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTVFE 455
+N + D+ G+ +I R + + G ++ PV + + +T
Sbjct: 280 MNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLP 339
Query: 456 EVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVN 515
+ V+ +V+P + +I + G+ V
Sbjct: 340 DRTVDGSAVLPWN---GRAYEIELDIA---------------------WDTATNVGISVG 375
Query: 516 AHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVCFESELIPFDCPF 562
+ T I D S+L +
Sbjct: 376 RSPDGTRHTNIGKY--------GADLYVDRGP-----SDLAGYSLAP 409
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* Length = 509 | Back alignment and structure |
|---|
Score = 394 bits (1014), Expect = e-132
Identities = 92/461 (19%), Positives = 170/461 (36%), Gaps = 63/461 (13%)
Query: 116 WQRTSFHFQPEKNWMNDPNGPLFYK--GWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHW 172
+ R HF PEK WMNDPNG + K +HL++QYNP++ WG + WGHA S DL+HW
Sbjct: 8 YNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHW 67
Query: 173 LYLPIAMVPDQWYDINGVWTGSATILPDG-------------QIVMLYTGSTDKSVQVQN 219
IA+ P+ +D G+++GS + + +IV +YT + + Q Q+
Sbjct: 68 DEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN-QTQD 124
Query: 220 LAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279
+A+ D + KY NPV+ FRDP W +W + + +
Sbjct: 125 IAFSLDGG----YTFTKYENNPVIDVS----SNQFRDPKVFWHEDSNQWIMVVSK--SQE 174
Query: 280 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339
++ + + K + L + G +EC V I K V+
Sbjct: 175 YKIQIFGSANLKNWVLNSNFSSGYYG-NQYECPGLIEVPIEN---------SDKSKWVMF 224
Query: 340 ASL-----DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYK 393
++ ++ Y +G ++ ++ PD+ + D G+ +YA ++F + +
Sbjct: 225 LAINPGSPLGGSINQYFVGDFD--GFQFVPDDSQ-----TRFVDIGKDFYAFQTFSEV-E 276
Query: 394 KRRIVWGWINETDTESDDLEKGWASVQTIPRTV------LYDNKTGSNVVQWPVEEIESL 447
+ W + W S ++ R ++Q PV
Sbjct: 277 HGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSIN 336
Query: 448 RQNSTVFEEVVVEPGSVVPLDI-GVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSA 506
+ + V + + + G D + F+ L + + + + ++
Sbjct: 337 VVDKLKKKNVKLTNKKPIKTNFKGSTGLFDFNITFKVLNLNVSPGKTHFDILINSQELNS 396
Query: 507 MGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETR 547
+ + S S R + F D+
Sbjct: 397 SV-DSIKIGFDSSQSSFY--IDRHIPNVEFPRKQFFTDKLA 434
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* Length = 634 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-100
Identities = 76/535 (14%), Positives = 144/535 (26%), Gaps = 117/535 (21%)
Query: 111 NAMFTWQRTSFHFQPEKNWMNDPNGPLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSAD 168
N +F R H P + + DP G +H+ + ++ D A +A+
Sbjct: 20 NTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGDG-------IAGATTAN 72
Query: 169 LIHWLYL----PIAMVPDQWYDINGVWTGSAT-ILPDGQIVMLYTGSTD----------K 213
L + + P D V+ G+ + + +LYT + +
Sbjct: 73 LATYTDTSDNGSFLIQPGGKNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTR 132
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDP--------------- 257
+ Q+LA + + K PV+ P + FR P
Sbjct: 133 GSETQSLAV----ARDGGRRFDKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLD 188
Query: 258 -------------TTAWAGPDGKWRLTIGSKIGKTGISLV------YQTTDFKTYELLDE 298
W + W + + + G + ++F+ +E L E
Sbjct: 189 EEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLGE 248
Query: 299 YLHAVPGTG-------------MWECVDFYPVAINGSVGLDTS---ATGPGIKHVLKASL 342
+ + +E + + G G +
Sbjct: 249 WWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTEGSGLPIVPQ 308
Query: 343 DDTKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPY--------- 392
+ D + E + D+G YA+ P
Sbjct: 309 VSSIHDMLWAAGEVGVGSEQEGAKVEFSPSMAGFLDWGFSAYAAAGKVLPASSAVSKTSG 368
Query: 393 --KKRRIVWGWINETDTESDDL----EKGWASVQTIPRTV--------LYDNKTGSNVVQ 438
R + + W+ E D ++GW +PR + + + V
Sbjct: 369 VEVDRYVSFVWLTGDQYEQADGFPTAQQGWTGSLLLPRELKVQTVENVVDNELVREEGVS 428
Query: 439 WPVEEIESLRQN-----STVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEE 493
W V E ++ T+ E + + L +A S
Sbjct: 429 WVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTAAVVPFAQSPSSKFFV 488
Query: 494 -GYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETR 547
A RS+ G + A S E T I+++ SN + D ++
Sbjct: 489 LTAQLEFPASARSSPLQSGFEILA--SELERTAIYYQFSNES------LVVDRSQ 535
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} Length = 408 | Back alignment and structure |
|---|
Score = 78.0 bits (191), Expect = 1e-15
Identities = 52/383 (13%), Positives = 102/383 (26%), Gaps = 40/383 (10%)
Query: 45 SAIFLLSLVALIINQTQKPLPSQNNIVPTSKPTSFSNPEPRGVA--EGVSAKSNSHLLRN 102
IF LV+ + + P + + G+ +SA S L
Sbjct: 7 FLIFAAVLVSACNSPKTTKEMKSTDDCPEKVTFTPEQIDHLGITDTNHLSAASKRALKWP 66
Query: 103 IKGSYNWTNAMFTWQRTSFHFQPEKN-WMNDPNGPLFYKGWYHLFYQYNPDSAV------ 155
W Q E+ DP+ + G Y+++Y +
Sbjct: 67 TDLGNEWFIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDI 126
Query: 156 -------WGNITWGHAVSADLIHWLYLPIAMV--PDQWYDINGVWTGSATILPDGQIVML 206
W +A S D W A+ YD V+T + + + +
Sbjct: 127 EKDKVFPWDRCDIWYATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEI-MKWEDKYYLC 185
Query: 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDG 266
Y +D W K + + + +D D
Sbjct: 186 YQTVKSPYNVRVKNQVGLAWADSPDGPWTKSEEPILSPADNGVWKGEEQDRFAVIKKGDF 245
Query: 267 KWRLTIGSKI----GKT----GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318
I GK + + F ++ A G + + P++
Sbjct: 246 DSHKVHDPCIIPYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPKGPYVKSPYNPIS 305
Query: 319 INGS----------VGLDTSATGPGIKHVLKASLD--DTKVDHYAIGTYNPANDKWTPDN 366
+G + + GP K+ ++ + D + ++ G A +
Sbjct: 306 NSGHEICVWPYNGGIASLITTDGPE-KNTIQWAPDGINFEIKSVIPGVNAHAIGLNRTAD 364
Query: 367 PEEDVGIGLKWDYGRYYASKSFY 389
E++ L+W Y + +
Sbjct: 365 VEKEPTEILRWGLTHIYNNGDYQ 387
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A Length = 404 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 1e-11
Identities = 38/233 (16%), Positives = 64/233 (27%), Gaps = 35/233 (15%)
Query: 63 PLPSQNNIVPTSKPTSFSNPEPRGVAEGVSAKSNSHLLRNIKGSYNWTNAMFTWQRTSFH 122
P S + + A+ + + L +K + W N W +
Sbjct: 16 PRGSHMASNTQTIAVDDTQNYDERKADSLGIPKGNKLSAAMKRAMKWENHDNKW-FFEYK 74
Query: 123 FQPEKNWMN--------DPNGPLFYKGWYHLFYQY-------------NPDSAVWGNITW 161
+P K + DP+ L Y+++Y W
Sbjct: 75 MEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDI 134
Query: 162 GHAVSADLIHWLYLPIAMV--PDQWYDINGVWTGSATILPDGQIVMLYTG----STDKSV 215
+A S D + W IA+ YD V+T + G+ + Y T +
Sbjct: 135 WYATSKDGLTWKEQGIAVKRGEKGAYDDRSVFTPEV-MEWKGKYYLCYQAVKSPYTVRVK 193
Query: 216 QVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268
+A P W PVL P G + + G +
Sbjct: 194 NTIGMACADSPEGL----W-TKTDKPVL-EPSDTGEWEGDEDNRFKVVSKGDF 240
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* Length = 447 | Back alignment and structure |
|---|
Score = 63.0 bits (152), Expect = 1e-10
Identities = 50/299 (16%), Positives = 80/299 (26%), Gaps = 38/299 (12%)
Query: 132 DPNG-PLFYKGWYHLFYQYNPDSAVWGN---ITWGHAVSADLIHWLYLPIAMVPDQWYDI 187
+ +G Y G++ +F + + + W +D
Sbjct: 66 NADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDA 125
Query: 188 NGV--------WTGSATILPDGQIVMLYTGSTDKSVQVQNLAY----------------P 223
N W+GSAT DG+I + YT + K Q L
Sbjct: 126 NDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGV 185
Query: 224 ADPSDPLLLDWVKYPGNPVLVPPRHIGPKD---FRDPTTAWAGPDGKWRLTIGSKIGKTG 280
D D Y + + D RDP K+ + + + G
Sbjct: 186 EDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY-VEDKGHKYLVFEANTGTEDG 244
Query: 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKA 340
+ Y + + NG++G+ +K V+K
Sbjct: 245 YQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMKP 304
Query: 341 SLDDTKV-DHYAIGTYNPANDKW-----TPDNPEEDVGIGLKWDYGRYYASKSFYDPYK 393
+ V D N KW + + GI Y Y S S PYK
Sbjct: 305 LIASNTVTDEIERANVFKMNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* Length = 374 | Back alignment and structure |
|---|
Score = 62.1 bits (150), Expect = 1e-10
Identities = 56/366 (15%), Positives = 99/366 (27%), Gaps = 87/366 (23%)
Query: 100 LRNIKGSY-NWTNAMFTWQRTSFHFQPEKNWM--------NDPNGPLFYKGWYHLFYQY- 149
LR I+ Y F P K + DP+ L YH++Y
Sbjct: 15 LRAIERGYDEKGPEWLF----EFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKG 70
Query: 150 ------------NPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSA 195
W HA S D I W + A+ YD V+T
Sbjct: 71 EGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIGPAIQRGAAGAYDDRAVFTPEV 130
Query: 196 TILPDGQIVMLYTG----STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGP 251
+G ++Y ++S++ +AY P P W P+L P + G
Sbjct: 131 LRH-NGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGP----W-TKSDAPIL-SPENDGV 183
Query: 252 KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWEC 311
D + G + ++ D + + G M E
Sbjct: 184 WDTDEDNRFLVKEKGSF--------------DSHKVHDPCLMFFNNRFYLYYKGETMGES 229
Query: 312 VDFYPVAINGSVGLDTSATGPGIKH----VLKASLDDTKVDH------------------ 349
++ I V + S GP K + + + +
Sbjct: 230 MNMGGREIKHGVAIADSPLGPYTKSEYNPITNSGHEVAVWPYKGGMATMLTTDGPEKNTC 289
Query: 350 ------------YAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRI 397
I A + P++ +D G++W Y + ++ +
Sbjct: 290 QWAEDGINFDIMSHIKGAPEAVGFFRPESDSDDPISGIEWGLSHKYDASWNWNYLCFFKT 349
Query: 398 VWGWIN 403
++
Sbjct: 350 RRQVLD 355
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* Length = 571 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 2e-10
Identities = 37/296 (12%), Positives = 66/296 (22%), Gaps = 43/296 (14%)
Query: 138 FYKGWYHLFYQYNPDSAVW--GNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195
+ G+ + + + + D HW + W+GSA
Sbjct: 143 NWNGYQLVIGMMGVPNVNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGT--PVIQQWSGSA 200
Query: 196 TILPDGQIVMLYTGST--DKSVQVQNLA-----YPADPSDPLLLDWVKYPGNPVLVP--- 245
T+ DG I + YT D + Q LA + + + V
Sbjct: 201 TLNKDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGY 260
Query: 246 -----------PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYE 294
+ RD +G L + G Q + Y
Sbjct: 261 HYQTYDQWKETNKGADNIAMRDAHV-IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYG 319
Query: 295 LLDEYLHAVPGTGMWECVDFYPVAI-NGSVGLDTS---ATGPGIKHVLKASLDDTKV--- 347
++ + N ++G+ P + V + V
Sbjct: 320 GTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVAKVYSPLISAPMVSDE 379
Query: 348 ----------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYK 393
+ Y + N D Y S + Y
Sbjct: 380 IERPDVVKLGNKYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVSDNLTHGYV 435
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* Length = 356 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 3e-08
Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 27/215 (12%)
Query: 125 PEKNWMNDPNGPLFYKGWYHLFY---QYNPDSAVWGNITWGHAVSADLIHW------LYL 175
E++ +P Y G + Y + G+A S D IH+ +
Sbjct: 45 WEESDTFNP-AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFY 103
Query: 176 PIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWV 235
P + G + DG V+LYT K ++ +A D L W
Sbjct: 104 PAKDNQAENECPGGTEDPRIAMTEDGTYVLLYTQWNRKVPRLA-VATSKD-----LKHWT 157
Query: 236 KYPGNPVLVPPRHIGPKDFRDP---------TTAWAGPDGKWRLTIGSKIG--KTGISLV 284
K+ + + A +GK+ + G K T +L+
Sbjct: 158 KFGPAFEKAYNGKFKDEATKSASLVTTLKGDKQVIAKVNGKYFMYWGEKNVYAATSDNLI 217
Query: 285 YQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAI 319
L + G + + P AI
Sbjct: 218 DWDPLLDENGELLKLFSPRSGYFDSQLTECGPPAI 252
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 3e-07
Identities = 28/153 (18%), Positives = 43/153 (28%), Gaps = 17/153 (11%)
Query: 135 GPLFYKGWYHLFY---QYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQWYDINGV 190
Y G + Y + G+A S D H+ PD
Sbjct: 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELE 116
Query: 191 WTGSA-----TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245
W G + DG VM+YT ++ +A + L DW K+ P
Sbjct: 117 WPGGCEDPRIAVTDDGLYVMMYTQWNRHVPRLA-VATSRN-----LKDWTKHG--PAFAK 168
Query: 246 PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278
+ + + K + I GK
Sbjct: 169 AFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGK 201
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} Length = 364 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 1e-04
Identities = 22/158 (13%), Positives = 38/158 (24%), Gaps = 20/158 (12%)
Query: 171 HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG------STDKSVQVQNLAYPA 224
Y P+ ++ N + +A L +G+IV+LY A
Sbjct: 35 TKFYCPLTK-DSIAWESNDTFNPAA-TLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATST 92
Query: 225 DPSDPLLLDWVKYPGNPVLVP-----PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT 279
D + + PV P P DP DG + +
Sbjct: 93 D-----GTHFQREK-TPVFYPDNDSQKELEWPGGCEDPR-IAVTDDGLYVMMYTQWNRHV 145
Query: 280 GISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPV 317
V + + K + +
Sbjct: 146 PRLAVATSRNLKDWTKHGPAFAKAFDGKFFNLGCKSGS 183
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 Length = 338 | Back alignment and structure |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 21/175 (12%)
Query: 140 KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLY--LPIAMVPDQWYDINGVWTGSATI 197
+F + P+ W G+ W Y PI + + V+ + +
Sbjct: 10 HHHMKVFTEKIPNIP-WEERPEGYT----GPVWRYSKNPI-IGRNPVPKGARVFNSAV-V 62
Query: 198 LPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDF 254
+G+ V ++ + + D ++W P + P
Sbjct: 63 PYNGEFVGVFRIDHKNTRPFLHFGRSKD-----GINWEIEP-EEIQWVDVNGEPFQPSYA 116
Query: 255 RDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMW 309
DP + + +T + I + T DFKT+ L G+
Sbjct: 117 YDPRVVKI--EDTYYITFCTDDHGPTIGVGM-TKDFKTFVRLPNAYVPFNRNGVL 168
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 573 | |||
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 100.0 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 100.0 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 100.0 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 100.0 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 100.0 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 100.0 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 100.0 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 100.0 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 100.0 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 100.0 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 99.97 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 99.97 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 99.92 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.92 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.91 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.91 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.9 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 99.87 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.86 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 99.85 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 99.84 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 99.82 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 99.81 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 99.79 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.79 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 99.78 | |
| 3p2n_A | 408 | 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-p | 99.72 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 99.63 | |
| 3taw_A | 356 | Hypothetical glycoside hydrolase; 5-bladed beta-pr | 99.59 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 99.56 | |
| 3qc2_A | 364 | Glycosyl hydrolase; 5-bladed beta propeller fold, | 99.53 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 99.51 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 99.51 | |
| 3r4z_A | 374 | Glycosyl hydrolase family 32, N terminal; AGAR met | 99.5 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 99.48 | |
| 1vkd_A | 338 | Conserved hypothetical protein TM1225; structural | 99.48 | |
| 4ak5_A | 404 | Anhydro-alpha-L-galactosidase; hydrolase, marine g | 99.44 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 99.28 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 99.16 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 98.93 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.72 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 98.65 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 98.63 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 98.51 | |
| 1uv4_A | 293 | Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hy | 98.25 | |
| 3qz4_A | 311 | Endo-1,4-beta-xylanase D; 5-bladed beta-propeller | 98.18 | |
| 1gyh_A | 318 | Arabinan endo-1,5-alpha-L-arabinosidase A; arabina | 98.06 | |
| 3kst_A | 306 | Endo-1,4-beta-xylanase; structural genomics, joint | 97.94 | |
| 1w2t_A | 432 | Beta fructosidase; hydrolase, glycosidase, inverta | 97.92 | |
| 3cu9_A | 314 | Intracellular arabinanase; glycosyl hydrolase, hig | 97.73 | |
| 3qee_A | 307 | Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; | 97.61 | |
| 3c2u_A | 538 | Xylosidase/arabinosidase; tetramer, glycoside hydr | 97.53 | |
| 3cpn_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 97.47 | |
| 1yrz_A | 528 | Xylan beta-1,4-xylosidase; structural genomics, ny | 97.46 | |
| 1yif_A | 533 | Beta-1,4-xylosidase; glycosidase, xylan, structura | 97.45 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 97.45 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 97.4 | |
| 1w18_A | 493 | Levansucrase; transferase, fructosyl transferase, | 97.37 | |
| 3nqh_A | 441 | Glycosyl hydrolase; structural genomics, joint cen | 97.32 | |
| 3c7f_A | 487 | Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta- | 97.3 | |
| 2x8s_A | 470 | Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; | 97.27 | |
| 2exh_A | 535 | Beta-D-xylosidase; glykosidase, hydrolsase, family | 97.23 | |
| 3ugf_A | 546 | Sucrose:(sucrose/fructan) 6-fructosyltransferase; | 96.75 | |
| 1oyg_A | 447 | Levansucrase; glycoside hydrolase, beta-propeller, | 96.4 | |
| 3pij_A | 526 | Beta-fructofuranosidase; five-bladed beta-propelle | 96.34 | |
| 2yfr_A | 571 | Levansucrase, inulosucrase; fructosyltransferase, | 96.29 | |
| 3zxk_A | 542 | Hiaxhd3; hydrolase, sugar binding protein; HET: XY | 96.23 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 96.22 | |
| 1st8_A | 543 | Fructan 1-exohydrolase IIA; five fold beta propell | 96.11 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 96.07 | |
| 2ac1_A | 541 | Invertase; five fold beta propeller, hydrolase; HE | 95.86 | |
| 3k1u_A | 330 | Beta-xylosidase, family 43 glycosyl hydrolase; str | 95.68 | |
| 4ffh_A | 492 | Levan fructotransferase; glycoside hydrolase; HET: | 95.45 | |
| 3a72_A | 355 | EXO-arabinanase; arabinase, glycosyl hydrolase, hy | 95.09 | |
| 2ydt_A | 367 | EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; | 94.99 | |
| 1y4w_A | 518 | EXO-inulinase; glycoside hydrolase FAMI crystallog | 94.7 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 94.53 | |
| 2xzi_A | 386 | KDNAse, extracellular sialidase/neuraminidase, put | 93.69 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 92.94 | |
| 3vss_A | 496 | Beta-fructofuranosidase; glycoside hydrolase famil | 92.63 | |
| 2bf6_A | 449 | Sialidase, EXO-alpha-sialidase; sialic acid, hydro | 92.02 | |
| 3lig_A | 634 | Fructosyltransferase; five bladed beta-propeller f | 91.15 | |
| 1ms9_A | 648 | Trans-sialidase; trans-glycosylation, protein-acrb | 90.62 | |
| 2w20_A | 471 | Sialidase A; secreted, cell WALL, hydrolase, glyco | 90.47 | |
| 3kf3_A | 509 | Invertase; GH32, glycoprotein, glycosidase, hydrol | 89.51 | |
| 2sli_A | 679 | Intramolecular trans-sialidase; hydrolase, neurami | 89.47 | |
| 4fj6_A | 523 | Glycoside hydrolase family 33, candidate sialidas; | 89.46 | |
| 3sc7_X | 516 | Inulinase; glycoside hydrolase family 32, glycosyl | 88.22 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 87.01 | |
| 1so7_A | 382 | Sialidase 2; neuraminidase, ganglioside, sugar-ind | 81.27 |
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-126 Score=1046.50 Aligned_cols=456 Identities=61% Similarity=1.164 Sum_probs=418.4
Q ss_pred CCCCCcccccccccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC
Q 008224 105 GSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW 184 (573)
Q Consensus 105 ~~~~~~~~~~~w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~ 184 (573)
..|||+|+|++||||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+++
T Consensus 6 ~~~~~~~~~~~~~Rp~yH~~P~~gwmNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~DLvhW~~~p~AL~P~~~ 85 (546)
T 3ugf_A 6 VPYPWSNAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQW 85 (546)
T ss_dssp -CCCCCHHHHHHTSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESSSSSCEECCCCBCSCSG
T ss_pred cCcCcchhhhhhcCCeEEEeCCCCCccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCCcCccccCCCCCCCCcc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecC
Q 008224 185 YDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (573)
Q Consensus 185 yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~ 264 (573)
||.+|||||||++++||+++|||||+..+..|+||+|+|+|.+||+|++|+|+++||||.+|+++...+||||+|+|+++
T Consensus 86 ~D~~G~~SGSavv~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRDPkVvw~~~ 165 (546)
T 3ugf_A 86 YDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVS 165 (546)
T ss_dssp GGTTCEEEEEEEECTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCCBCCCEECS
T ss_pred cccCCcCcceEEEeeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeeccceEeECC
Confidence 99999999999888899999999999877789999999999999999999999999999988888788999999779878
Q ss_pred CCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 265 DGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 265 dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
+|+|+|++|++.++.|+++||+|+||++|++.+++++...+.|||||||||+|+.++.+||++|++|+++||||+.|.++
T Consensus 166 ~g~w~MviGa~~~~~G~vllY~S~DL~~W~~~~~~~~~~~~~gmwECPDlf~l~~~~~~gl~~s~~g~~~k~Vl~~s~~~ 245 (546)
T 3ugf_A 166 NGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLEELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDE 245 (546)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEESSSSSCEECSSCSEEETTCCCEEEEEEEEEESSCSSCCCTTCCSTTEEEEEEEEETT
T ss_pred CCEEEEEEEEccCCcceEEEEECCCCCCceEcccccccCCCCCeEECCeEEEECCcCccceeecccCCceeEEEEecccC
Confidence 99999999998778899999999999999999999876666789999999999988878999999999999999999988
Q ss_pred CcceEEEEEEecCCCCcccCCCCCcccccceeeccCCCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccE
Q 008224 345 TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPR 424 (573)
Q Consensus 345 ~~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPR 424 (573)
.++++|+||+||.++.+|+|++.++|.|+++++|||+|||+|||.|+.++|||+||||++++++.++.++||+|+|||||
T Consensus 246 ~~~~~Y~iG~~d~~~~~f~~~~~~~d~g~~~~lD~GdfYA~qtf~d~~~gRril~gWm~~~d~~~~~~~~gW~g~ltlPR 325 (546)
T 3ugf_A 246 QQRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPR 325 (546)
T ss_dssp TTEEEEEEEEEETTTTEEEESCGGGCTTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCE
T ss_pred CCceEEEEeeecCCCCeeecCCcccccCccccccCCCccCcceeecCCCCCEEEEEeCCCCCcCCCCcccCccCcceeCE
Confidence 88899999999999899999988899999999999999999999998789999999999999887778899999999999
Q ss_pred EEEEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEee---ccCcccccCcccc--cC
Q 008224 425 TVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE---LLGSGAMEEGYGC--SG 499 (573)
Q Consensus 425 eL~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~---l~~~~~~~~~~~c--~~ 499 (573)
||+|++++|.+|+|+||+||++||.+...++++++++|+.++++..++.|+||+++|+++ |+.+.+++.+++| ++
T Consensus 326 el~l~~~~g~~L~q~Pv~El~~LR~~~~~~~~~~~~~g~~~~l~~~~~~q~di~~~f~~~~~~l~~~~~~~~~~~c~~~~ 405 (546)
T 3ugf_A 326 TVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDKEALEGTIEADMGYNCTTSG 405 (546)
T ss_dssp EEEECTTTSSSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCCSCCSEEEEEEEEEECC-----------CCCGGGSC
T ss_pred EEEEEeCCCCEEEEEehHHHHHHhcCcceecceEecCCCeEEecCCCccEEEEEEEEEeccccccccccccccccccccc
Confidence 999986667789999999999999999999999999999999999989999999999997 4555566889999 58
Q ss_pred CCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCC-EEEEeecCCCCCCcCCCCCCCCC
Q 008224 500 GAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRFVCFESELIPFDC 560 (573)
Q Consensus 500 ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~-~~~~c~d~~rSs~~~~~~~~~~~ 560 (573)
||+.||.+|||||+|+|+++++|+|+|||+|.|+.+|+ +++||+|++|||+++++..+..|
T Consensus 406 ga~~~g~~g~fgl~v~a~~~~~E~T~v~f~~~~~~~~~~~~~~~~D~srSs~~~~~~~~~~~ 467 (546)
T 3ugf_A 406 GAAERGVLGPFGLLVSATENLSEQTPVYFYIAKGTDGNFKTFFCLDESRSSKASDVSKQVKG 467 (546)
T ss_dssp GGGSCBTTBCEEEEEEECTTCSSCEEEEEEEEC----CCEEEEEEECTTSCSCSSSCCCEEE
T ss_pred CccccCcccceEEEEEeCCCCceEEEEEEEeeccCCCcceEEEeeccccccCCcCCcccccc
Confidence 99999999999999999999999999999999998888 99999999999999998877444
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-105 Score=887.71 Aligned_cols=436 Identities=47% Similarity=0.896 Sum_probs=392.4
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeE
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSA 195 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~-~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSa 195 (573)
+||+|||+|++||||||||++|++|+|||||||||+++.||+ |+||||+|+|||||+++|+||.|+++||.+|||||||
T Consensus 7 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFYQ~~P~~~~~g~~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~Gv~SGsa 86 (543)
T 1st8_A 7 YRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWIHLDPAIYPTQEADSKSCWSGSA 86 (543)
T ss_dssp TSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSCSSCCSCCEEEEEEESSSSSEEECCCSBCCCSGGGTTEEEEEEE
T ss_pred ccccccccCCcCCeECCcccEEECCEEEEEEeeCCCCCCCCCccEEEEEECCCccceEECCeeccCCCccccCCEEcceE
Confidence 499999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 196 TILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
++++||+++|||||......|.||+|+|+|++||+|++|+|++.||||.+|+++...+||||+|+|++++|+|+|++|++
T Consensus 87 v~~~dg~~~l~YTg~~~~~~q~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~g~~~~~fRDP~vvw~~~~g~w~mv~ga~ 166 (543)
T 1st8_A 87 TILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLREWVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGD 166 (543)
T ss_dssp EEETTTEEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTCCTTSEECCCCCEECTTSCEEEEEEEE
T ss_pred EEeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCcceeEEcCCCcEEeCCCCCCcCccCCCeEEEECCCCcEEEEEEEe
Confidence 88789999999999644458999999999999999999999988999988888778999999977986799999999998
Q ss_pred cCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEEEe
Q 008224 276 IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTY 355 (573)
Q Consensus 276 ~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG~~ 355 (573)
.+..|.+++|+|+||++|++.+.+++.....+||||||||+|+.++.++|++|++|...||||+.|. ..+++|++|+|
T Consensus 167 ~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~vl~~s~--~~~~~Y~iG~~ 244 (543)
T 1st8_A 167 RDNNGMAFLYQSTDFVNWKRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTIGTY 244 (543)
T ss_dssp ETTEEEEEEEEESSSSSCEECSSCSEEETTCCCCEEEEEEEEETTCSCCCCTTCCSTTEEEEEEEEE--TTEEEEEEEEE
T ss_pred cCCceEEEEEECCCCCCcEECccccccCCCCCceeCCcEEEECCCCccceEecCCCCCceEEEEecc--CCccEEEEEEE
Confidence 7778999999999999999998888765566899999999999878889999999988999999997 46789999999
Q ss_pred cCCCCcccCCCCCc--ccccceeeccCCCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeecCC
Q 008224 356 NPANDKWTPDNPEE--DVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG 433 (573)
Q Consensus 356 d~~~~~f~pd~~~~--d~g~~~~lD~G~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~~g 433 (573)
|.++.+|+|+.... |.++++++|||+|||+|||.|++++|||+||||+++++..++.++||+|+|||||||+|++ +|
T Consensus 245 d~~~~~f~~~~~~~~~d~~~~~~lD~GdfYA~qtf~~~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~~-~g 323 (543)
T 1st8_A 245 SPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADDIEKGWAGLQSFPRALWIDR-NG 323 (543)
T ss_dssp ETTTTEEEETTCCCCCSSTTSEESBSSSCEEEEEEEETTTTEEEEEEEECCCSCHHHHHHHTEECEECCCEEEEECT-TS
T ss_pred eCCCCeEeeCCccccccccceeeccCCCcccccEeecCCCCCEEEEEecCCCCcCCCCCCCCccceeeeCEEEEEEe-CC
Confidence 99888999987655 7777889999999999999998679999999999999877778899999999999999973 67
Q ss_pred ceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEee-ccCcccc-----cCcccc-cCCCccccc
Q 008224 434 SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSGAM-----EEGYGC-SGGAIDRSA 506 (573)
Q Consensus 434 ~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~-l~~~~~~-----~~~~~c-~~ga~~r~~ 506 (573)
++|+|+||+||++||.+...+.++.+.+++.+++....+.|+||+++|++. ++..... +....| ..|++.||.
T Consensus 324 ~~L~q~Pv~El~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (543)
T 1st8_A 324 KQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAASQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGA 403 (543)
T ss_dssp SSEEEEECGGGGGGEEEEEEEEEEEECTTEEEECCSSCTTEEEEEEEEEECCGGGSEECCCSSCCHHHHHHHSCTTSCCS
T ss_pred CEEEEeEhHHHHHhhcCcccceeEEecCCceEEecccccceeeEEEEEeecccccccccccccccccccccccccccccc
Confidence 679999999999999998888888998888888887788899999999876 3221111 234568 678889999
Q ss_pred cCcceEEEEEcCCCceeeeEEEEEccCCCCC-EEEEeecCCCCCCcCCCC
Q 008224 507 MGPFGLLVNAHDSLSELTPIFFRSSNTTKGT-NTYFCADETRFVCFESEL 555 (573)
Q Consensus 507 ~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~-~~~~c~d~~rSs~~~~~~ 555 (573)
.++|||.|+++++++|+|.|||++.++.+++ .++||.|++||+...+..
T Consensus 404 ~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~ 453 (543)
T 1st8_A 404 LGPFGLLAMASKDLKEQSAIFFRVFQNQLGRYSVLMCSDLSRSTVRSNID 453 (543)
T ss_dssp SCCEEEEEEECTTSSSCEEEEEEEEECTTSCEEEEEEEECTTSCSCSSCC
T ss_pred ccceEEEEEccCCCcccEEEEEEeecccCCeEEEEEEecccccCcccccc
Confidence 9999999999999999999999999987777 889999999999876554
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-105 Score=886.84 Aligned_cols=439 Identities=48% Similarity=0.877 Sum_probs=394.2
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSav 196 (573)
+||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+++||.+|||||||+
T Consensus 8 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~D~~G~~SGsav 87 (541)
T 2ac1_A 8 YRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSAT 87 (541)
T ss_dssp TSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSBEEEEEEECCCSGGGTTCEEEEEEE
T ss_pred cccceeecCccCCeeCCCccEEECCEEEEEEeeCCCCCCCCCcEEEEEECCCccceEECceeecCCCccccCCEEcceEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC--CCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 197 ILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP--RHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p--~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
+++||+++|||||......|.||+|+|+|++||+|++|+|+++||||.+| +++...+||||+|+|++++|+|||++|+
T Consensus 88 ~~~dg~~~l~YTg~~~~~~~~q~lA~s~D~~d~~l~~w~k~~~nPVi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 167 (541)
T 2ac1_A 88 ILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGS 167 (541)
T ss_dssp ECTTSCEEEEEEEECTTSCEEEEEEEESCTTCTTCCCEEECTTCCSBCCCTTTCCCTTSEECCCCCEECTTSCEEEEEEE
T ss_pred EeeCCEEEEEEEEeCCCCcEEEEEEEECCCCCCCceeEEecCCCcEEcCCCCCCCCCCceECCeEEeEeCCCeEEEEEEE
Confidence 87799999999996545689999999999999999999999899999887 7777899999997798669999999999
Q ss_pred ecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCC---eEEEEEeeeCCCcceEEE
Q 008224 275 KIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPG---IKHVLKASLDDTKVDHYA 351 (573)
Q Consensus 275 ~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~---~k~VL~~S~~~~~~~~Y~ 351 (573)
+.+..|.+++|+|+||++|++.+.+++.....+||||||||+|+.++.++|++|++|.. +||||+.|.++...++|+
T Consensus 168 ~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~~~l~~s~~g~~~~~~~~vl~~s~~~~~~~~Y~ 247 (541)
T 2ac1_A 168 KIHRRGLAITYTSKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKHDYYT 247 (541)
T ss_dssp EETTEEEEEEEEESSSSSCEECSSCSEEEETSCCEEEEEEEEEESSCSCCCCTTCCCBTTBCEEEEEEEEETTTTEEEEE
T ss_pred ecCCceEEEEEECCCCCCcEEcccccccCCCCCcccCCcEEEECCCCcceeEecCCCCCcccceeEEEeeecCCcceEEE
Confidence 87778999999999999999998888655556899999999999877889999999865 799999999877889999
Q ss_pred EEEecCCCCcccCCCCCcccccceeeccCCCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeec
Q 008224 352 IGTYNPANDKWTPDNPEEDVGIGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK 431 (573)
Q Consensus 352 iG~~d~~~~~f~pd~~~~d~g~~~~lD~G~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~ 431 (573)
+|+||.++.+|+|++..+|.+++.++|||+|||+|||.|++++|||+||||+++++..++.++||+|+|||||||+|++
T Consensus 248 ~G~~d~~~~~f~~~~~~~~~~~~~~lD~GdfYA~qtf~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPRel~l~~- 326 (541)
T 2ac1_A 248 IGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSSVEDDVEKGWSGIQTIPRKIWLDR- 326 (541)
T ss_dssp EEEEETTTTEEEECTTCCSSTTSCBSCSSSCEEEEEEEETTTTEEEEEEEECCSSCHHHHHHHTEECEECCCEEEEECT-
T ss_pred EEEEecCCCeEeeCCccccccceeeecCCCcccccEEecCCCCCEEEEEEeCCCCcCCCCCCCCcccccccCEEEEEEc-
Confidence 9999998889999888788888889999999999999998679999999999999877777899999999999999973
Q ss_pred CCceEEEccHHHHHhhhccce-eeeeEEeCCCceeeeecccceEEEEEEEEEee-ccCcc-----cccCcccc-cCCCcc
Q 008224 432 TGSNVVQWPVEEIESLRQNST-VFEEVVVEPGSVVPLDIGVATQLDISAEFETE-LLGSG-----AMEEGYGC-SGGAID 503 (573)
Q Consensus 432 ~g~~L~q~Pv~Ele~LR~~~~-~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~-l~~~~-----~~~~~~~c-~~ga~~ 503 (573)
+|++|+|+||+||++||.+.. .+.++.+.+++.+++....+.|+||+++|++. ++... ..+.++.| ..|++.
T Consensus 327 ~g~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 406 (541)
T 2ac1_A 327 SGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSV 406 (541)
T ss_dssp TSSSEEEEECGGGGGGBCSSCEEEEEEEECTTEEEECCSSCTTEEEEEEEEECSCGGGSEECCTTCCCHHHHHHHTCTTS
T ss_pred CCCEEEEeeHHHHHHhhccccccccceEecCCceeEecCCccceeeeEEEEecccccccccccccccccccccccccccc
Confidence 676799999999999999887 78888898888888887778899999999876 22111 12455778 678999
Q ss_pred ccccCcceEEEEEcCCCceeeeEEEEEccCCC--CC-EEEEeecCCCCCCcCCCCC
Q 008224 504 RSAMGPFGLLVNAHDSLSELTPIFFRSSNTTK--GT-NTYFCADETRFVCFESELI 556 (573)
Q Consensus 504 r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~--~~-~~~~c~d~~rSs~~~~~~~ 556 (573)
||.+++|||.|+++++++|+|.|||++.++.+ ++ .+++|.|++||+...+...
T Consensus 407 ~~~~~~fgl~~~~~~~~~e~t~i~~~~~~~~~~~~~~~~~~~~Dr~rs~~~~~~~~ 462 (541)
T 2ac1_A 407 KSGLGPFGLMVLASKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDK 462 (541)
T ss_dssp CCSEEEEEEEEEECTTSSSCEEEEEEEEESSTTCSCEEEEEEEECTTSCSCTTSCC
T ss_pred ccCccceEEEEEccCCCcccEEEEEEeccCcccCCceEEEEEeecCccCccccccc
Confidence 99999999999999999999999999998744 56 7899999999998766543
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-90 Score=765.00 Aligned_cols=381 Identities=29% Similarity=0.525 Sum_probs=319.6
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSav 196 (573)
+||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+.++|.+|||||||+
T Consensus 39 ~Rp~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL~P~~~~d~~g~~SGSav 118 (526)
T 3pij_A 39 WYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAV 118 (526)
T ss_dssp SCCSSSCBCSSEEEEEEEEEEEETTEEEEEEEEETTCSSSCSBEEEEEEESSSSSEEECCCCBCCCBGGGTTEEEEEEEE
T ss_pred ccccEeEeCCcCCeeCCeEEEEECCEEEEEEEcCCCCCCcCCcEEEEEEeCCCCCceeCeeccCCCCccccCCeEeceEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCeEEEEEcccCC------C--CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcE
Q 008224 197 ILPDGQIVMLYTGSTD------K--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKW 268 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~------~--~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w 268 (573)
+++||+++|+|||+.. . ..|.|++|+|+|++ |++|+|++ |||..|++....+||||+| |. .+|+|
T Consensus 119 ~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~g---l~~w~K~~--pvi~~P~~~~~~~fRDP~V-~~-~~g~w 191 (526)
T 3pij_A 119 IDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDE---LTSATKQG--MIIDCPTDKVDHHYRDPKV-WK-TGDTW 191 (526)
T ss_dssp ECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTT---CSCEEEEE--EEECCCGGGEEEEEEEEEE-EE-ETTEE
T ss_pred EccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCC---cceEEECC--ccccCCCCccccccccCEE-EE-ECCEE
Confidence 8888999999999842 1 24899999999863 68999984 8887665445689999999 65 68999
Q ss_pred EEEEeee-cCCeeEEEEEEeCCCCCcEEccccc-ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC--
Q 008224 269 RLTIGSK-IGKTGISLVYQTTDFKTYELLDEYL-HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD-- 344 (573)
Q Consensus 269 ~MvvGs~-~~~~G~illY~S~Dl~~W~~~~~l~-~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~-- 344 (573)
||++|++ .+.+|++++|+|+||++|++.++++ ......+||||||||+|++.. ...||||.+|..+
T Consensus 192 ~mv~ga~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~~~~~g~mwECPdlf~l~~~~----------g~~k~vL~~s~~g~~ 261 (526)
T 3pij_A 192 YMTFGVSSADKRGQMWLFSSKDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKD----------GNEKWVIGFSAMGSK 261 (526)
T ss_dssp EEEEEEEETTSCEEEEEEEESSSSSCEEEEEEEECSCTTCCEEEEEEEEEEECTT----------SCEEEEEEEEEESCC
T ss_pred EEEEEEecCCCCcEEEEEECCCCCcceEcCcccccCCCccCeEECCEEEEECCCC----------CceeEEEEEeccccC
Confidence 9999976 4678999999999999999999954 333345699999999998421 2469999776432
Q ss_pred --------CcceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCC
Q 008224 345 --------TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKG 415 (573)
Q Consensus 345 --------~~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~G 415 (573)
..+.+|++|+||. +.+|+|++. ..++||| +|||+|||. + ++|||+||||+++++..++.++|
T Consensus 262 ~~~~~~~~~~~~~Y~vG~~d~-~~~f~~~~~------~~~lD~G~dfYA~qtf~-~-~gRri~~gW~~~~~~~~~~~~~g 332 (526)
T 3pij_A 262 PSGFMNRNVSNAGYMIGTWEP-GGEFKPETE------FRLWDCGHNYYAPQSFN-V-DGRQIVYGWMSPFVQPIPMEDDG 332 (526)
T ss_dssp CBTTBSCSSSEEEEEEEEECT-TSCEEESSC------CEESCCSSSCEEEEEEE-E-TTEEEEEEEECCCSSCCGGGGGT
T ss_pred CCccccccccceeEEEEEEcC-CCcEEECCc------ceeeeeCCCccccceeC-C-CCCEEEEEecCCCcccCCCCCCC
Confidence 1357899999994 357988652 3579999 799999998 4 79999999999999988888999
Q ss_pred CcccCcccEEEEEeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEeeccCcccccCcc
Q 008224 416 WASVQTIPRTVLYDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGY 495 (573)
Q Consensus 416 Wag~lslPReL~L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~l~~~~~~~~~~ 495 (573)
|+|+|||||||+|++ +| +|+|+||+||++||.+...+.++++..+....+.. .+.+++|+++|+++.
T Consensus 333 W~g~ltlPRel~l~~-~g-~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~-~~~~~el~~~~~~~~---------- 399 (526)
T 3pij_A 333 WCGQLTLPREITLGD-DG-DVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIAD-DAEAVEIEMTIDLAA---------- 399 (526)
T ss_dssp EECEECCCEEEEECT-TS-SEEEEECGGGGGGBSCCEEEEEEEECSSEEEEEES-CCSSEEEEEEEETTT----------
T ss_pred ccceEEeCEEEEEEe-CC-cEEEeecHHHHHhhhCcccccceEeccCCceEecC-CCcEEEEEEEEEECC----------
Confidence 999999999999975 44 69999999999999999888888887664444443 356789988887641
Q ss_pred cccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCCcC
Q 008224 496 GCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVCFE 552 (573)
Q Consensus 496 ~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~~~ 552 (573)
+..++|||.|+++++. |+|.|+|+..+ . .++.|+++|+...
T Consensus 400 ---------~~~~~~gl~l~~~~~~-e~t~i~yd~~~-----~-~l~~DR~~s~~~~ 440 (526)
T 3pij_A 400 ---------STAERAGLKIHATEDG-AYTYVAYDGQI-----G-RVVVDRQAMANGD 440 (526)
T ss_dssp ---------CCCSEEEEEEEECTTS-CCEEEEEETTT-----T-EEEEECTTCSSSC
T ss_pred ---------CCcceEEEEEEECCCC-cEEEEEEEeCC-----C-EEEEECCCCCCCC
Confidence 1124799999999887 99999997432 1 3458999998753
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-89 Score=756.43 Aligned_cols=387 Identities=27% Similarity=0.518 Sum_probs=322.3
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec----cCCCCcCCCcEEe
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM----VPDQWYDINGVWT 192 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL----~Pd~~yD~~Gv~S 192 (573)
+||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+|| .|+ +|.+||||
T Consensus 7 ~Rp~~H~~P~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~Dlv~W~~~~~al~~~g~P~--~d~~g~~S 84 (518)
T 1y4w_A 7 YRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGS--DVTEMYFS 84 (518)
T ss_dssp TCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTS--CCCBEEEE
T ss_pred ccccEeeeCCcCceECCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCccEEECCceEecCCCCC--CCCCceEe
Confidence 499999999999999999999999999999999999999999999999999999999999999 776 57899999
Q ss_pred eeEEEccCC----------eEEEEEcccCCC------------CcceEEEEEecCCCCCCcceEEEe-CCCceecCCCC-
Q 008224 193 GSATILPDG----------QIVMLYTGSTDK------------SVQVQNLAYPADPSDPLLLDWVKY-PGNPVLVPPRH- 248 (573)
Q Consensus 193 GSavv~~dG----------~~~~~YTG~~~~------------~~q~q~lA~S~D~~Dp~L~~W~K~-~~nPVl~~p~g- 248 (573)
|||+++++| +++|||||+... ..|.||+|+|+|.+ ++|+|+ ++||||.+++.
T Consensus 85 Gsav~~~~~~~g~~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g----~~w~k~~~~~pvi~~~~~~ 160 (518)
T 1y4w_A 85 GSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSP 160 (518)
T ss_dssp EEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTT
T ss_pred eeEEEcCCCccccccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCC----ceEEEcCCCCCeEecCCcc
Confidence 999987665 899999998532 25999999999853 899999 78999986543
Q ss_pred --CCCCCCCCCeeEeecCCCcEEEE--EeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCccc
Q 008224 249 --IGPKDFRDPTTAWAGPDGKWRLT--IGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVG 324 (573)
Q Consensus 249 --~~~~~fRDP~V~w~~~dG~w~Mv--vGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~g 324 (573)
....+||||+|+|.+++|+|||+ +|++ ..++||+|+||++|++.+++.+.....+||||||||+|.+++.
T Consensus 161 y~~~~~~fRDP~V~~~~~~g~w~mv~~~g~~----~~i~ly~S~DL~~W~~~~~~~~~~~~~~mwECPdlf~l~~~g~-- 234 (518)
T 1y4w_A 161 YEAEYQNFRDPFVFWHDESQKWVVVTSIAEL----HKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSG-- 234 (518)
T ss_dssp CGGGTTSEEEEEEEEETTTTEEEEEEEEGGG----TEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTTS--
T ss_pred cccCCCCcCCCcEeEECCCCcEEEEEEecCC----CeEEEEECCCCCCCeECccccccCCCCCeEECCeEEEeecCCC--
Confidence 24689999999887668999999 6654 2588999999999999998876444567999999999965432
Q ss_pred ceeccCCCCeEEEEEeeeCCC-------cceEEEEEEecCCCCcccCCCCCcc--cccceeeccC-CCcccceeecCCCC
Q 008224 325 LDTSATGPGIKHVLKASLDDT-------KVDHYAIGTYNPANDKWTPDNPEED--VGIGLKWDYG-RYYASKSFYDPYKK 394 (573)
Q Consensus 325 l~~s~~g~~~k~VL~~S~~~~-------~~~~Y~iG~~d~~~~~f~pd~~~~d--~g~~~~lD~G-~fYAs~tf~d~~~~ 394 (573)
++.||||++|.++. .+++|++|+||.. +|+|+...+. .+...++||| +|||+|||.|.+++
T Consensus 235 -------~~~k~vL~~s~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~g 305 (518)
T 1y4w_A 235 -------NSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLN 305 (518)
T ss_dssp -------SCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGG
T ss_pred -------CceeEEEEeccCCCCccccccCCcEEEEEEeeCC--EEEeCCcccccccccceEEccCCCCccccccccCCCC
Confidence 24699999997642 3678999999975 7988753221 1235789999 89999999985589
Q ss_pred cEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEeecCC-ceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccce
Q 008224 395 RRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDNKTG-SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVAT 473 (573)
Q Consensus 395 RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~~g-~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~ 473 (573)
|||+||||++|++.....++||+|+|||||||.|++.+| .+|+|+||+||++||.+...+.+..++.++...+....+.
T Consensus 306 Rri~~gWm~~~~~~~~~pt~gW~g~ltlPRel~l~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (518)
T 1y4w_A 306 DHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQPQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGE 385 (518)
T ss_dssp GCEEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEECSCGGGTBCSSCSEEEEEEEECSEECCCEECCS
T ss_pred CEEEEEecCCCccccccCCCCcCcccccCeEEEEEecCCcCeEEEeehHHHHhhhccceeccceeeccccceeecCCCCe
Confidence 999999999998776556789999999999999986444 5899999999999999887777777776655555555567
Q ss_pred EEEEEEEEE-eeccCcccccCcccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCCc
Q 008224 474 QLDISAEFE-TELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVCF 551 (573)
Q Consensus 474 qldi~a~f~-~~l~~~~~~~~~~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~~ 551 (573)
++||+++|+ .. ..++|||.|+++++++|.|.|+|++.++ .+|.|+++|+..
T Consensus 386 ~~el~~~~~~~~---------------------~~~~~gl~l~~~~~~~e~~~i~~~~~~~------~l~~dr~~s~~~ 437 (518)
T 1y4w_A 386 TFKVDLSFSAKS---------------------KASTFAIALRASANFTEQTLVGYDFAKQ------QIFLDRTHSGDV 437 (518)
T ss_dssp SEEEEEEEETTC---------------------SSSEEEEEEEECTTSSSCEEEEEETTTT------EEEEECTTSSCC
T ss_pred EEEEEEEEecCC---------------------CCccEEEEEEcCCCCceeEEEEEEecCC------EEEEecCCCCCC
Confidence 889988876 21 1157999999999999999999975432 488999999874
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-89 Score=754.15 Aligned_cols=377 Identities=27% Similarity=0.515 Sum_probs=309.2
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcE--Eeee
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGV--WTGS 194 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv--~SGS 194 (573)
+||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+|| | |.+|| ||||
T Consensus 28 ~Rp~yH~~P~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~wg~~~WgHa~S~DLvhW~~~~~aL-~----d~~g~~~~SGS 102 (516)
T 3sc7_X 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTAI-A----DENGVEAFTGT 102 (516)
T ss_dssp TCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTCSTTCCCEEEEEEESSSSSCEEEEEEE-C----CBTTEEEEEEE
T ss_pred ccccEeecCCcCCcCCCeeeEEECCEEEEEEeCCCCCCccCCCEEEEEEeCCCCcceecCccc-c----CCCCceeEece
Confidence 599999999999999999999999999999999999999999999999999999999999999 4 45666 9999
Q ss_pred EEEccCC----------eEEEEEcccCC-CCcceEEEEEecCCCCCCcceEEEeCCCceecCCC----CC-CCCCCCCCe
Q 008224 195 ATILPDG----------QIVMLYTGSTD-KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR----HI-GPKDFRDPT 258 (573)
Q Consensus 195 avv~~dG----------~~~~~YTG~~~-~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~----g~-~~~~fRDP~ 258 (573)
|++++++ .++|||||+.+ .+.|.|++|+|+|.+ ++|+|+++||||.+++ ++ ...+||||+
T Consensus 103 av~~~~~~~g~~~~~~~~l~l~YTg~~~~~~~q~q~lA~s~D~g----~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPk 178 (516)
T 3sc7_X 103 AYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVDNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPK 178 (516)
T ss_dssp EEECTTCTTSSSCSSSCCEEEEEEEEETTTTEEEEEEEEESSTT----SCCEECTTCCSBCHHHHTTTCTTSSSSCEEEE
T ss_pred EEEeCCcccccccCCCCeEEEEEeeeeCCCCceEEEEEEecCCC----ceEEEcCCCceEcCCCcccccccCCCcccCCe
Confidence 9987654 59999999864 357999999999864 8999999999997543 22 234899999
Q ss_pred eEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCC-C----CCceeeecEEEecccCcccceeccCCCC
Q 008224 259 TAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVP-G----TGMWECVDFYPVAINGSVGLDTSATGPG 333 (573)
Q Consensus 259 V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~-~----~GmWECPd~f~l~~~~~~gl~~s~~g~~ 333 (573)
|+|.+++|+|+|++|++ ..|.+++|+|+||++|++.+++..... + .+||||||||+|+.+++ .+
T Consensus 179 V~~~~~~g~w~mv~g~~--~~~~i~ly~S~DL~~W~~~~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~---------~~ 247 (516)
T 3sc7_X 179 VFFHRQSGNWIMVLAHG--GQDKLSFWTSADTINWTWQSDLKSTSINGLSSDITGWEVPDMFELPVEGT---------EE 247 (516)
T ss_dssp EEEETTTTEEEEEEECB--TTCEEEEEEESSSSSCEEEEEEEGGGSTTCCTTCCCBCCCEEEEEECSSS---------SC
T ss_pred EEEECCCCeEEEEEEEC--CCCEEEEEECCCCCCceEcccccccCCCCcccccceEECCcEEEecccCC---------CC
Confidence 98877789999999864 346899999999999999999875321 1 24999999999986543 24
Q ss_pred eEEEEEeeeCCC-----cceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeec--CCCCcEEEEeeccCC
Q 008224 334 IKHVLKASLDDT-----KVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYD--PYKKRRIVWGWINET 405 (573)
Q Consensus 334 ~k~VL~~S~~~~-----~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d--~~~~RrIl~GW~~e~ 405 (573)
.||||++|.++. ...+|+||+||+. +|+++.... ..+++||| +|||+|||++ ..++|||+||||+++
T Consensus 248 ~k~VL~~s~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~---~~~~lD~G~DfYA~qtf~~~~~~~gRri~w~w~~~~ 322 (516)
T 3sc7_X 248 TTWVVMMTPAEGSPAGGNGVLAITGSFDGK--SFTADPVDA---STMWLDNGRDFDGALSWVNVPASDGRRIIAAVMNSY 322 (516)
T ss_dssp EEEEEEECCSSCCTTSSSCCEEEEEEECSS--CEEECCCCT---TTSBSCSSSSCEEEEECBSCCTTTCCCEEEEEECCS
T ss_pred ceEEEEECCCCCCCCCCCceEEEEEEccCC--eeEeCCCCc---cceeEEcCCCccccccccCCcCCCCCEEEEEECCCc
Confidence 699999998542 3578999999986 566643211 13579999 6999999974 347999999999887
Q ss_pred CCCCCCcCCCCcccCcccEEEEEeecCC-ceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEee
Q 008224 406 DTESDDLEKGWASVQTIPRTVLYDNKTG-SNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETE 484 (573)
Q Consensus 406 d~~~~~~~~GWag~lslPReL~L~~~~g-~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~ 484 (573)
+... .++||+|+|||||||+|++++| .+|+|+||+||++||.+...+.+.++.+++.. +....+.++||+++|+++
T Consensus 323 ~~~~--pt~gW~g~ltlPRel~l~~~~~~~~L~q~Pv~El~~Lr~~~~~~~~~~~~~~~~~-l~~~~~~~~el~~~~~~~ 399 (516)
T 3sc7_X 323 GSNP--PTTTWKGMLSFPRTLSLKKVGTQQHFVQQPITELDTISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYPD 399 (516)
T ss_dssp TTCS--SCSSEECEECCCEEEEEEEETTEEEEEEEECGGGGGGEEEEEEEEEEEECTTCCB-STTCCCSSEEEEEEEEEC
T ss_pred cCCC--CCCCcccccccCEEEEEEecCCceEEEeCCHHHHHhhhccceeecceEecCCceE-ccCCCceEEEEEEEEEcC
Confidence 6543 4689999999999999986444 57999999999999998888888888877654 333456789999998753
Q ss_pred ccCcccccCcccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCC
Q 008224 485 LLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVC 550 (573)
Q Consensus 485 l~~~~~~~~~~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~ 550 (573)
.+ .+|||.|++++ +|+|.|+|++.++ .+|.|+++|+.
T Consensus 400 --------------~~-------~~fgl~l~~~~--~e~t~i~~d~~~~------~l~~DR~~sg~ 436 (516)
T 3sc7_X 400 --------------AG-------SVLSLAVRKGA--SEQTVIKYTQSDA------TLSVDRTESGD 436 (516)
T ss_dssp --------------TT-------CEEEEEEEECS--SCCEEEEEETTTT------EEEEECTTSSC
T ss_pred --------------CC-------CEEEEEEecCC--CcEEEEEEEccCC------EEEEecCCCCC
Confidence 01 25999999987 7999999975432 46799999965
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-88 Score=739.60 Aligned_cols=386 Identities=24% Similarity=0.462 Sum_probs=313.5
Q ss_pred cccccceeeeecCCCcccCCcceeEEC--CEEEEEEeeCCCCCCCCC-cEEEEEEecCccCeeecceeccCCCCcCCCcE
Q 008224 114 FTWQRTSFHFQPEKNWMNDPNGPLFYK--GWYHLFYQYNPDSAVWGN-ITWGHAVSADLIHWLYLPIAMVPDQWYDINGV 190 (573)
Q Consensus 114 ~~w~Rp~yHf~P~~gWmNDPNG~~y~~--G~YHLFYQ~nP~~~~wG~-~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv 190 (573)
.+.+||+|||+|++||||||||++|++ |+|||||||||+++.||+ |+||||+|+|||||+++|+||.|+. |.+||
T Consensus 6 ~~~~Rp~~H~~P~~gwmNDPNG~~y~~~~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~DLvhW~~~~~aL~P~~--d~~G~ 83 (509)
T 3kf3_A 6 SEYNRPLIHFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPEH--DNEGI 83 (509)
T ss_dssp HHHHSCSSSCCCSSEEEEEEEEEEEETTTTEEEEEEEEETTCSSCCSSBEEEEEEESSSSSCEECSCCBCCSS--TTCEE
T ss_pred cccccccEeecCCcCCeeCCcceEEeCCCCEEEEEEecCCCCCCCCCcCEEEEEEccCCCCcEECcccccccc--cCCCE
Confidence 346799999999999999999999994 999999999999999995 9999999999999999999999986 78999
Q ss_pred EeeeEEEcc-------------CCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCC
Q 008224 191 WTGSATILP-------------DGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDP 257 (573)
Q Consensus 191 ~SGSavv~~-------------dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP 257 (573)
|||||+++. +|+++|+|||+.. ..|.|++|+|.|++ .+|+|+++||||.. ...+||||
T Consensus 84 ~SGSav~d~~~t~g~~~~~~~p~~~l~~~YTg~~~-~~q~q~lA~S~D~g----~~~~k~~~nPVi~~----~~~~fRDP 154 (509)
T 3kf3_A 84 FSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIP-DNQTQDIAFSLDGG----YTFTKYENNPVIDV----SSNQFRDP 154 (509)
T ss_dssp EEEEEEECTTCTTSCCCTTSCGGGCEEEEEEEEET-TEEEEEEEEESSSS----SSCEECTTCCSBCC----SCSSCEEE
T ss_pred EeceEEEeCCccccccccccCCCCceEEEECCCCC-CCeeEEEEEECCCC----cceEEcCCCceEcC----CCCcccCC
Confidence 999998853 3689999999754 47999999999964 79999999999964 34799999
Q ss_pred eeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEE
Q 008224 258 TTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHV 337 (573)
Q Consensus 258 ~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~V 337 (573)
+|+|.+++|+|+|++|++ ..|.+++|+|+||++|++.+++.+. ....||||||||+|+.++. .+.|||
T Consensus 155 kVfw~~~~g~w~Mv~g~~--~~g~i~ly~S~DL~~W~~~~~~~~~-~~G~mwECPdlf~l~~~~~---------~~~k~v 222 (509)
T 3kf3_A 155 KVFWHEDSNQWIMVVSKS--QEYKIQIFGSANLKNWVLNSNFSSG-YYGNQYECPGLIEVPIENS---------DKSKWV 222 (509)
T ss_dssp EEEEETTTTEEEEEEEEG--GGTEEEEEEESSSSSCEEEEEECCB-CCCSCEEEEEEEEEEBTTS---------SCEEEE
T ss_pred eEEEECCCCEEEEEEEEC--CCCEEEEEECCCCCCceEccccccC-CccceeECCeEEEECccCC---------CCceEE
Confidence 999887789999999864 3578999999999999999998772 2223999999999986532 357999
Q ss_pred EEeeeCC-----CcceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCC
Q 008224 338 LKASLDD-----TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDD 411 (573)
Q Consensus 338 L~~S~~~-----~~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~ 411 (573)
|++|.++ ...++|+||+||+. +|+|+... ..+|||| +|||+|||.+ .++|||+||||++|++....
T Consensus 223 L~~s~~~~~p~g~~~~~Y~vG~~d~~--~f~~~~~~-----~~~lD~G~DfYA~qtf~~-~~grri~igWm~~~~~~~~~ 294 (509)
T 3kf3_A 223 MFLAINPGSPLGGSINQYFVGDFDGF--QFVPDDSQ-----TRFVDIGKDFYAFQTFSE-VEHGVLGLAWASNWQYADQV 294 (509)
T ss_dssp EEEEECSCCTTSSCEEEEEEEEECSS--CEEESSCB-----CEESCCSSSCEEEEECBS-CSSSEEEEEECSCTTTTTTS
T ss_pred EEEccCCCCCCCCCceEEEEEEEeCC--EEEecCcc-----ceeeccCCcceeeceeeC-CCCCEEEEEecCCcccccCC
Confidence 9999764 24579999999974 78887542 3579999 6999999955 48999999999999987777
Q ss_pred cCCCCcccCcccEEEEEee------cCCceEEEccHH-HHHhhhccceeeeeEEeCCCceeeeeccc-ceEEEEEEEEEe
Q 008224 412 LEKGWASVQTIPRTVLYDN------KTGSNVVQWPVE-EIESLRQNSTVFEEVVVEPGSVVPLDIGV-ATQLDISAEFET 483 (573)
Q Consensus 412 ~~~GWag~lslPReL~L~~------~~g~~L~q~Pv~-Ele~LR~~~~~~~~~~l~~g~~~~l~~~~-~~qldi~a~f~~ 483 (573)
.++||+|+|||||||+|++ +++.+|+|+||+ ||++||... .+.++++++++.+.+.... ..++||+++|++
T Consensus 295 p~~~W~g~~tlPRel~l~~~~~~~~~~~~~L~q~Pv~~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~ 373 (509)
T 3kf3_A 295 PTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDSINVVDKL-KKKNVKLTNKKPIKTNFKGSTGLFDFNITFKV 373 (509)
T ss_dssp SCCSEECCBCCCEEEEEEEEESSSSCEEEEEEEEECCCTTSEEEEEE-EEEEEECCTTSCEECCCSCCCSEEEEEEEEEE
T ss_pred CCCCcccccccCEEEEEEecccCCCCCccEEEEEEcHHHHHHhhCcc-eecceEecCCceeEEecCCCCceEEEEEEEec
Confidence 7899999999999999986 223479999999 999999554 4888899888766565443 237888888875
Q ss_pred eccCcccccCcccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCC
Q 008224 484 ELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVC 550 (573)
Q Consensus 484 ~l~~~~~~~~~~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~ 550 (573)
..... . ..+...-|+|.+..+.+..|.|.|.|.... .+++ .|+++|..
T Consensus 374 ~~~~~--------~-----~~~~~~~~~l~l~~~~~~~e~~~i~yd~~~-----~~l~-~DR~~sg~ 421 (509)
T 3kf3_A 374 LNLNV--------S-----PGKTHFDILINSQELNSSVDSIKIGFDSSQ-----SSFY-IDRHIPNV 421 (509)
T ss_dssp CSCCC--------C-----GGGSEEEEEEEECCSSSCCCEEEEEEETTT-----TEEE-EECCCTTC
T ss_pred ccccc--------c-----ccccceeEEEEEEecCCCCcEEEEEEECCC-----CEEE-EECCCCCC
Confidence 41000 0 000112378877778888899999996321 2333 69999875
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-85 Score=715.40 Aligned_cols=371 Identities=21% Similarity=0.375 Sum_probs=301.5
Q ss_pred cceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEE
Q 008224 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATI 197 (573)
Q Consensus 118 Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv 197 (573)
.|+|||+|+.||||||||++|++|+|||||||||+++.||+ ||||+|+|||||+++|+||.|++ .+|||||||++
T Consensus 1 ~P~~H~~p~~gwmNDPNG~~y~~G~YHlFYQ~~P~~~~~g~--WgHa~S~DLvhW~~~~~aL~P~~---~~g~~SGSav~ 75 (492)
T 4ffh_A 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG--WDHASTTDGVAFTHHGTVMPLRP---DFPVWSGSAVV 75 (492)
T ss_dssp -CCSSCCCSSEEEEEEEEEEEETTEEEEEEEEESSTTCCCE--EEEEEESSSSSCEEEEEEECCBT---TBCCCCEEEEE
T ss_pred CCcEeEcCCCCCeeCCeeeEEECCEEEEEEECCCCCCCCCc--EEEEEeCCCCccEECCCCCCCCC---CCCEEeceEEE
Confidence 48999999999999999999999999999999999999998 99999999999999999999985 68999999998
Q ss_pred ccCCe-------EEEEEcccCC--CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCC---------CCCCee
Q 008224 198 LPDGQ-------IVMLYTGSTD--KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKD---------FRDPTT 259 (573)
Q Consensus 198 ~~dG~-------~~~~YTG~~~--~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~---------fRDP~V 259 (573)
+++|+ ++|||||+.. ...|.|++|+|+|.+ ++|+|+ +||||.+|....... ||||+|
T Consensus 76 ~~~~~~g~~~~~~~l~YTg~~~~~~~~q~q~lA~S~D~g----~~w~k~-~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V 150 (492)
T 4ffh_A 76 DTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTDGG----FTFTAL-PDPVIVNTDGRAATTPAEIENAEWFRDPKI 150 (492)
T ss_dssp ETTCSSSSCTTEEEEEEEEEGGGCGGGEEEEEEEESSSS----SSCEEC-SSCSBCCTTTTTCCSHHHHHHHTCEEEEEE
T ss_pred eCCCccccCCCcEEEEEeecccCCCCcEEEEEEEeCCCC----ceEEEc-CccccCCCCccccccccccccCCCCcCCEE
Confidence 77775 9999999864 357999999999963 899999 899998653321111 999999
Q ss_pred EeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEE
Q 008224 260 AWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339 (573)
Q Consensus 260 ~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~ 339 (573)
+|.+++|+|||++ ++ .+.++||+|+||++|++.+++.......+||||||||+|++++ .+.||||+
T Consensus 151 ~~~~~~g~w~mv~-a~---~~~i~ly~S~DL~~W~~~~~~~~~~~~g~mwECPdlf~l~~~~----------~~~k~vL~ 216 (492)
T 4ffh_A 151 HWDTARGEWVCVI-GR---LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD----------GTRHWVLA 216 (492)
T ss_dssp EEETTTTEEEEEE-EE---TTEEEEEEESSSSSCEECCCEECSCGGGCCCEEEEEEEEECTT----------SCEEEEEE
T ss_pred EEECCCCEEEEEE-EC---CCeEEEEECCCCCCceEeccccccCCccceEECCeEEEECCCC----------CCceEEEE
Confidence 7766789999999 44 3589999999999999999987654445699999999998542 24799999
Q ss_pred eeeCC-----CcceEEEEEEecCCCCcccCCCCCcccccceeeccC-CCcccceee--cCCCCcEEEEeeccCCCCC---
Q 008224 340 ASLDD-----TKVDHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFY--DPYKKRRIVWGWINETDTE--- 408 (573)
Q Consensus 340 ~S~~~-----~~~~~Y~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~--d~~~~RrIl~GW~~e~d~~--- 408 (573)
+|.++ ....+|++|+||+ .+|+|+... ..++||| +|||+|||. |.+++|||+||||++|++.
T Consensus 217 ~s~~~~~~~~~~~~~Y~vG~~d~--~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~~grri~~gW~~~~~~~~~~ 289 (492)
T 4ffh_A 217 ASMDAYGIGLPMTYAYWTGTWDG--EQFHADDLT-----PQWLDWGWDWYAAVTWPSIDAPETKRLAIAWMNNWKYAARD 289 (492)
T ss_dssp EECCCGGGTCCSSEEEEEEEECS--SCEEESCSS-----CEESCCSSCCEEEEEEECSSCTTTCEEEEEECCCTTTCSSC
T ss_pred EccCCCCCCCccceEEEEEEeeC--CEEEeCCCC-----ccceeeCCCcccCCeEccCCCCCCCEEEEEecCCCcccccc
Confidence 99764 3457899999995 589887532 3589999 799999999 4458999999999999864
Q ss_pred CCCc-CCCCcccCcccEEEEEeecCCc--eEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEeec
Q 008224 409 SDDL-EKGWASVQTIPRTVLYDNKTGS--NVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETEL 485 (573)
Q Consensus 409 ~~~~-~~GWag~lslPReL~L~~~~g~--~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~l 485 (573)
.++. ++||+|+|||||||+|++.+|. +|+|+||+||++||.+...+.++++..+.. +.. .+..++|+++|+..
T Consensus 290 ~pt~~~~gW~g~~tlPRel~l~~~~~g~~~L~q~Pv~el~~lr~~~~~~~~~~~~~~~~--~~~-~~~~~el~~~~~~~- 365 (492)
T 4ffh_A 290 VPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTPVAALTNYVTATTTLPDRTVDGSAV--LPW-NGRAYEIELDIAWD- 365 (492)
T ss_dssp CHHHHHHSEECCBCCCEEEEEEECTTSCEEEEEEECGGGGGGEEEEEEECCEEESSEEE--CSC-CCSSEEEEEEEEES-
T ss_pred CCcccccCcccccccCEEEEEEEcCCCeeEEEEeehHHHHHhhccceeecceeccCcee--ecC-CCceEEEEEEEccC-
Confidence 3333 4899999999999999865453 899999999999999988888777764332 222 34567887776532
Q ss_pred cCcccccCcccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCCc
Q 008224 486 LGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVCF 551 (573)
Q Consensus 486 ~~~~~~~~~~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~~ 551 (573)
. .+.|||.|+.+++ |.|.|+|....+ .++.|+++|+..
T Consensus 366 ---------------~-----~~~~gl~l~~~~~--~~~~i~yd~~~~------~l~ldR~~sg~~ 403 (492)
T 4ffh_A 366 ---------------T-----ATNVGISVGRSPD--GTRHTNIGKYGA------DLYVDRGPSDLA 403 (492)
T ss_dssp ---------------S-----CSEEEEEEEECTT--SSCCEEEEEETT------EEEEECGGGCCT
T ss_pred ---------------C-----ccEEEEEEEECCC--CeEEEEEECcCC------EEEEEccCCCCc
Confidence 0 1248999999887 457888864321 344799998764
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-83 Score=718.28 Aligned_cols=393 Identities=19% Similarity=0.306 Sum_probs=303.1
Q ss_pred cccccccccceeeeecCCCcccCCcceeE--ECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec----ceeccCCC
Q 008224 110 TNAMFTWQRTSFHFQPEKNWMNDPNGPLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL----PIAMVPDQ 183 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~gWmNDPNG~~y--~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~l----p~AL~Pd~ 183 (573)
++.+.+.+||+|||+|+.||||||||++| ++|+|||||||||. | ||||+|+|||||+++ |+||.|++
T Consensus 19 ~~~~~~~~Rp~~H~~p~~gwmNDPnG~~yD~~~G~YHlFYQ~~P~----g---WgHa~S~DLvhW~~~~~~~~~aL~P~~ 91 (634)
T 3lig_A 19 NNTLFHLWRPRAHILPAEGQIGDPCAHYTDPSTGLFHVGFLHDGD----G---IAGATTANLATYTDTSDNGSFLIQPGG 91 (634)
T ss_dssp TTTTTTTSCCSSSCCCSSEEEEEECCCEECTTTCCEEEEEEETTS----C---EEEEEESSSSCCEESCSTTCEEECSCS
T ss_pred hcccccccCccEeEcCCCCcccCCccceEeCCCCEEEEEEecCCC----c---eeEEEecCcCceeECcCCCCceecCCC
Confidence 34455666999999999999999999999 99999999999994 4 999999999999999 99999999
Q ss_pred CcCCCcEEeeeEEEc-cCCeEEEEEcccCC----------CCcceEEEEEecCCCCCCcceEEEeCCCceecC-CCCCCC
Q 008224 184 WYDINGVWTGSATIL-PDGQIVMLYTGSTD----------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP-PRHIGP 251 (573)
Q Consensus 184 ~yD~~Gv~SGSavv~-~dG~~~~~YTG~~~----------~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~-p~g~~~ 251 (573)
+||.+|||||||+++ .+|+++|||||+.. .+.|+||+|+|.|. +++|+|+++||||.. |+++..
T Consensus 92 ~~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~----g~~w~K~~~nPVi~~~p~g~~~ 167 (634)
T 3lig_A 92 KNDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDG----GRRFDKLDQGPVIADHPFAVDV 167 (634)
T ss_dssp SSCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGG----GTEEEECSSSCSBCSSSTTCCE
T ss_pred CCCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCC----CCEEEECCCCceEcCCCcccCC
Confidence 999999999999864 37999999999852 24699999999985 489999999999984 556677
Q ss_pred CCCCCCeeEe----------------------------ecCCCcEEEEEeeec-CCeeEEEEEE--eCC---CCCcEEcc
Q 008224 252 KDFRDPTTAW----------------------------AGPDGKWRLTIGSKI-GKTGISLVYQ--TTD---FKTYELLD 297 (573)
Q Consensus 252 ~~fRDP~V~w----------------------------~~~dG~w~MvvGs~~-~~~G~illY~--S~D---l~~W~~~~ 297 (573)
.+||||+|+| ...+|+|||++|++. +.+|+++||+ |+| |++|+|++
T Consensus 168 ~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~lY~~~s~dd~~l~~W~~~g 247 (634)
T 3lig_A 168 TAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFLYRQNGGNASEFQYWEYLG 247 (634)
T ss_dssp EEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEEEEEGGGCTTCCSCEEEEE
T ss_pred CccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEEEEeCCCCccccCCceEec
Confidence 8999999966 225789999999984 5688999999 788 99999999
Q ss_pred cccccC------------CCCC-ceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC-----------cceEEEEE
Q 008224 298 EYLHAV------------PGTG-MWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT-----------KVDHYAIG 353 (573)
Q Consensus 298 ~l~~~~------------~~~G-mWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~-----------~~~~Y~iG 353 (573)
+++... ...| ||||||||+|++++.. ....||||.+|..+. ....|++|
T Consensus 248 ~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~-------~~~~~~vl~~~~~g~~~~~~~~~~~~~~~~y~~G 320 (634)
T 3lig_A 248 EWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHD-------PQTGEVFVTLGTEGSGLPIVPQVSSIHDMLWAAG 320 (634)
T ss_dssp EEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBC-------TTTSEEEEEEEEEECCSSCCTTCCCEEEEEEEEE
T ss_pred ccccccccccccccccccCceeeEEECCCEEEECCcccC-------CCCCcEEEEECCCCCCCccccccccccccEEEEE
Confidence 987421 1234 9999999999865320 012588888876421 13568899
Q ss_pred Eec--CC----CCcccCCCCCcccccceeeccC-CCcccceeecCC----------C-CcEEEEeeccCCCCC----CCC
Q 008224 354 TYN--PA----NDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPY----------K-KRRIVWGWINETDTE----SDD 411 (573)
Q Consensus 354 ~~d--~~----~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~----------~-~RrIl~GW~~e~d~~----~~~ 411 (573)
+|+ .. +.+|+++ ..++|||| +|||+|||.++. + +||||||||+++++. .+.
T Consensus 321 ~~~~d~~~~~~~~~f~~~-------~~~~lD~G~dfYA~qtf~~~~~~~~~~~~~~~~gRri~igWm~~~~~~~~~~~pt 393 (634)
T 3lig_A 321 EVGVGSEQEGAKVEFSPS-------MAGFLDWGFSAYAAAGKVLPASSAVSKTSGVEVDRYVSFVWLTGDQYEQADGFPT 393 (634)
T ss_dssp EEEECTTSSSCSEEEEEE-------EEEEEECCTTEEEEEEEEECTTSHHHHHHTCCSCEEEEEEEECSSTTTTCSSCCH
T ss_pred EEecCcccccCceeEecC-------CccccccCcCceecceecccccccccccccCCCCCEEEEEeCCCCcccccccCCC
Confidence 994 32 3355443 35789999 799999999974 2 999999999999865 345
Q ss_pred cCCCCcccCcccEEEEEee----------------------cCC----ceEEEccHHHH-Hhhhccceeee--eEEeCCC
Q 008224 412 LEKGWASVQTIPRTVLYDN----------------------KTG----SNVVQWPVEEI-ESLRQNSTVFE--EVVVEPG 462 (573)
Q Consensus 412 ~~~GWag~lslPReL~L~~----------------------~~g----~~L~q~Pv~El-e~LR~~~~~~~--~~~l~~g 462 (573)
.+.||+|+|||||||.|++ .+| .+|+|+||+|| ++||.+...+. +.++...
T Consensus 394 ~~~gW~g~ltlPReL~l~~~~~v~~~~l~~~~~~s~~~~~~~~G~~t~~~L~q~Pv~El~~~Lr~~~~~~~~~~~~~~~~ 473 (634)
T 3lig_A 394 AQQGWTGSLLLPRELKVQTVENVVDNELVREEGVSWVVGESDNQTATLRTLGITIARETKAALLANGSVTAEEDRTLQTA 473 (634)
T ss_dssp HHHSEECEECCCEEEEEEEEEEEECSHHHHCSSCSCEEEEECSSEEEEEEEEEEECHHHHHHHHHTCEEEEECCEEECSE
T ss_pred CCCCCccccccCEEEEEEEecCccCccccccccccceeccccCCccccCEEEEeecHHHHHHhhccceeecccceecccc
Confidence 6789999999999999952 122 27999999999 99999875432 2444432
Q ss_pred ceeeee-cccceEEEEEEEEEeeccCcccccCcccccCCCccccccCcceEEEEEcCCCceeeeEEEEEccCCCCCEEEE
Q 008224 463 SVVPLD-IGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYF 541 (573)
Q Consensus 463 ~~~~l~-~~~~~qldi~a~f~~~l~~~~~~~~~~~c~~ga~~r~~~gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~ 541 (573)
..+++. ...+..++|+++|+..- .| |+....|||.|+++++ |.|.|+|.... .++.
T Consensus 474 ~~~~~~~~~~~~~~El~~~i~~~~----------~~------~~~a~~~Gl~L~~s~~--e~T~I~Yd~~~-----~~l~ 530 (634)
T 3lig_A 474 AVVPFAQSPSSKFFVLTAQLEFPA----------SA------RSSPLQSGFEILASEL--ERTAIYYQFSN-----ESLV 530 (634)
T ss_dssp EEEECSSCCSSSEEEEEEEEECCG----------GG------TTSCCEEEEEEEESSS--CCEEEEEETTT-----TEEE
T ss_pred ceecccccCCCcEEEEEEEEecCC----------CC------cCcccEEEEEEEeCCC--cEEEEEEECCC-----CEEE
Confidence 233322 13456788888876420 01 1111248999999865 89999995221 2344
Q ss_pred eecCCCCCCc
Q 008224 542 CADETRFVCF 551 (573)
Q Consensus 542 c~d~~rSs~~ 551 (573)
.|+++|+..
T Consensus 531 -vDRs~Sg~~ 539 (634)
T 3lig_A 531 -VDRSQTSAA 539 (634)
T ss_dssp -EECTTSCTT
T ss_pred -EECCCCCCc
Confidence 799999874
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-80 Score=665.55 Aligned_cols=354 Identities=32% Similarity=0.588 Sum_probs=297.1
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSav 196 (573)
+||+|||+|++||||||||++|++|+|||||||||.++.||+++||||+|+|||||+++|+||.|+++ .+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~nDPng~~~~~G~yhlfyq~~p~~~~~g~~~wgha~S~Dlv~W~~~~~aL~p~~~--~~g~~sgsav 79 (432)
T 1w2t_A 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDDE--THGVFSGSAV 79 (432)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSCCSCEEEEEEESSSSSCEEEEEEECCSST--TEEEEEEEEE
T ss_pred CCcCCcccCCCCCeECCCcCeEECCEEEEEEecCCCCCCCCCcEEEEEEcCCCcCeEECCccCCCCCC--CCCEEeeEEE
Confidence 49999999999999999999999999999999999999999999999999999999999999999876 6799999998
Q ss_pred EccCCeEEEEEcccCC-----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 197 ILPDGQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~-----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
+ .+|+++|||||+.. ...|.|++|+|+|+ .+|+|++.||||..+++....+||||+| |. .+|+|||+
T Consensus 80 ~-~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~V-f~-~dg~~~m~ 151 (432)
T 1w2t_A 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (432)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-CSSSEEEE
T ss_pred E-ECCEEEEEEecCccCCCCCCceEEEEEEEeCCC-----CeEEecCCCceEeCCCccccccccCCEE-EE-ECCEEEEE
Confidence 6 79999999999864 24689999999984 6999998899998654433678999999 65 48999999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEE
Q 008224 272 IGSKI-GKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (573)
Q Consensus 272 vGs~~-~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y 350 (573)
+|++. +..|.+++|+|+||++|++.+++... ...+|||||+||+++ .||||++|..+..++.|
T Consensus 152 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~-~~g~~~EcP~lf~~~---------------g~~vL~~s~~g~~~~~Y 215 (432)
T 1w2t_A 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIDCPDLVRIG---------------EKDILIYSITSTNSVLF 215 (432)
T ss_dssp EEEEETTTEEEEEEEEESSSSSCEEEEEEEEE-TTCSCCEEEEEEEET---------------TEEEEEEEETTTTEEEE
T ss_pred EEEecCCCCcEEEEEECCCCCCceEccccccC-CCCCEEECCeEEEEC---------------CEEEEEEeCCCCcceEE
Confidence 99873 56789999999999999999988765 334699999999995 28999999887777899
Q ss_pred EEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCC--CCCCcCCCCcccCcccEEEE
Q 008224 351 AIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDT--ESDDLEKGWASVQTIPRTVL 427 (573)
Q Consensus 351 ~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~--~~~~~~~GWag~lslPReL~ 427 (573)
++|+|| + ..|.++ ...++||| +|||+|||.|+ + |||+||||+++++ ..++.++||+|+|||||||.
T Consensus 216 ~~G~~d-~-~~~~~~-------~~~~lD~G~dfYA~qtf~~~-~-rri~~gW~~~~~~~~~~pt~~~gW~g~~tlPR~l~ 284 (432)
T 1w2t_A 216 SMGELK-E-GKLNVE-------KRGLLDHGTDFYAAQTFFGT-D-RVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (432)
T ss_dssp EEEEEE-T-TEEEEE-------EEEESCCSSSCEEEEECBSC-S-SEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EEEEec-C-CEEcCC-------ccceeccCCCccccceecCC-C-CEEEEEEecCcccccccCcccCCCcCceeccEEEE
Confidence 999999 5 445432 25689999 89999999997 4 9999999999987 56667899999999999999
Q ss_pred EeecCCceEEEccHHHHHhhhccceeeeeEEeCCCceeeeecccceEEEEEEEEEeeccCcccccCcccccCCCcccccc
Q 008224 428 YDNKTGSNVVQWPVEEIESLRQNSTVFEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAM 507 (573)
Q Consensus 428 L~~~~g~~L~q~Pv~Ele~LR~~~~~~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~l~~~~~~~~~~~c~~ga~~r~~~ 507 (573)
|+ +| +|+|+||+||++||.+...+.+ .+ ...+....+.++||+++|+.
T Consensus 285 l~--~g-~L~q~Pv~el~~lr~~~~~~~~-~~----~~~~~~~~~~~~e~~~~~~~------------------------ 332 (432)
T 1w2t_A 285 VE--NN-ELKVKPVDELLALRKRKVFETA-KS----GTFLLDVKENSYEIVCEFSG------------------------ 332 (432)
T ss_dssp EE--TT-EEEEEECGGGGGGEEEEEEEES-SC----EEEECCCSSSCEEEEEEEEE------------------------
T ss_pred Ee--CC-EEEEEEcHHHHHhhccceeccc-cc----eeEecCCCCeEEEEEEEEec------------------------
Confidence 95 45 8999999999999998755543 22 13444445667888777641
Q ss_pred CcceEEEEEcCCCceeeeEEEEEccCCCCCEEEEeecCCCCCCc
Q 008224 508 GPFGLLVNAHDSLSELTPIFFRSSNTTKGTNTYFCADETRFVCF 551 (573)
Q Consensus 508 gpfGl~vla~~~~~E~T~v~f~v~~~~~~~~~~~c~d~~rSs~~ 551 (573)
+|||.+. +. .|.|.|+|+ ++ .+|.|+++|+..
T Consensus 333 -~~~l~~~-~~--~~~~~i~~~-----~~---~~~~dr~~~~~~ 364 (432)
T 1w2t_A 333 -EIELRMG-NE--SEEVVITKS-----RD---ELIVDTTRSGVS 364 (432)
T ss_dssp -EEEEEEE-CS--SCEEEEEEE-----TT---EEEEECTTSSTT
T ss_pred -eEEEEEe-CC--CCeEEEEEE-----CC---EEEEEcCCCCCC
Confidence 4899884 32 388999997 12 568898888754
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-31 Score=289.31 Aligned_cols=274 Identities=16% Similarity=0.128 Sum_probs=183.6
Q ss_pred ccCC-cceeE-ECCEEEEEEe-eCCCCCCCCCcEEEEEEec----CccCeeecceeccCCCCcCCCcEEeeeEEEccCCe
Q 008224 130 MNDP-NGPLF-YKGWYHLFYQ-YNPDSAVWGNITWGHAVSA----DLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQ 202 (573)
Q Consensus 130 mNDP-NG~~y-~~G~YHLFYQ-~nP~~~~wG~~~WGHAvS~----DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~ 202 (573)
++|| +|-++ ++|+||+||+ ..|+ ++..||.|..++ ||+||+++|.+|.|+.++ .|||||||++..||+
T Consensus 133 l~D~~~G~v~~~~G~~vvf~L~~dP~---~~d~Hi~~~ys~~g~~DLvhW~~~G~~~~~~~~~--~g~WSGSAi~~~DG~ 207 (571)
T 2yfr_A 133 VQDAKTGYVSNWNGYQLVIGMMGVPN---VNDNHIYLLYNKYGDNDFNHWKNAGPIFGLGTPV--IQQWSGSATLNKDGS 207 (571)
T ss_dssp BBCTTTCCBCCBTTEEEEEEEEECTT---SCCCEEEEEEEETTCCCGGGCEEEEETTCSCCTT--EEEEEEEEEECTTSC
T ss_pred EEecCCCcEEEecCceEEEEEccCCC---CCCcEEEEEECcCCccccCCccCCCeEcCCCCCC--CceECCeeEECcCCE
Confidence 4788 78887 7999999999 5555 678999999998 779999999998886443 799999998767999
Q ss_pred EEEEEcccCCC--CcceEEEEEe-------cCCCCCCcceEEEeCCCceecCCC--------------CCCCCCCCCCee
Q 008224 203 IVMLYTGSTDK--SVQVQNLAYP-------ADPSDPLLLDWVKYPGNPVLVPPR--------------HIGPKDFRDPTT 259 (573)
Q Consensus 203 ~~~~YTG~~~~--~~q~q~lA~S-------~D~~Dp~L~~W~K~~~nPVl~~p~--------------g~~~~~fRDP~V 259 (573)
++|||||+... ..+.|++|.. .+..+..+..|++. .+|+.+++ +....+||||+|
T Consensus 208 l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~--~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP~V 285 (571)
T 2yfr_A 208 IQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDND--HIVFEGDGYHYQTYDQWKETNKGADNIAMRDAHV 285 (571)
T ss_dssp EEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEE--EEEECCCSSSBCCHHHHHHHCSSCCCCCCEEEEE
T ss_pred EEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCC--CceecCCCcccccccccccccccCCcccCcCCeE
Confidence 99999997532 2356666652 11111123445443 34554432 114689999999
Q ss_pred EeecCCCcEEEEEeeecC------------------------------------------CeeEEEEEEeCCC----CCc
Q 008224 260 AWAGPDGKWRLTIGSKIG------------------------------------------KTGISLVYQTTDF----KTY 293 (573)
Q Consensus 260 ~w~~~dG~w~MvvGs~~~------------------------------------------~~G~illY~S~Dl----~~W 293 (573)
|.+++|+|||++|++.. ..|+|.||+|+|+ .+|
T Consensus 286 -f~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~~n~~~W 364 (571)
T 2yfr_A 286 -IDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDVKNPSVA 364 (571)
T ss_dssp -EECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCTTSCCEE
T ss_pred -EEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCcCCcccc
Confidence 76456999999998732 2589999999765 689
Q ss_pred EEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCc-----------------ceEE-EEEEe
Q 008224 294 ELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTK-----------------VDHY-AIGTY 355 (573)
Q Consensus 294 ~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~-----------------~~~Y-~iG~~ 355 (573)
++.++|..+.....|||||+||+++ .+|||.+|....+ ...| ++.
T Consensus 365 e~~~pL~~~~~v~dm~EcP~lf~~d---------------G~yyL~~S~q~~~~t~~~~~~~A~g~~g~~~~~y~~vS-- 427 (571)
T 2yfr_A 365 KVYSPLISAPMVSDEIERPDVVKLG---------------NKYYLFAATRLNRGSNDDAWMATNKAVGDNVAMIGYVS-- 427 (571)
T ss_dssp EECCCSEECTTTBSCCEEEEEEEET---------------TEEEEEEEEEGGGBSCHHHHHHHHHHHSCCEEEEEEEE--
T ss_pred eeccccccCCCcCceeecCcEEEEC---------------CEEEEEEeCCCCcccccccccccccCcCCceEEEEEEe--
Confidence 9999987654334599999999996 2788887754211 1233 443
Q ss_pred cCCCCcccCCCCC-cccc----cceeeccCCCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEee
Q 008224 356 NPANDKWTPDNPE-EDVG----IGLKWDYGRYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYDN 430 (573)
Q Consensus 356 d~~~~~f~pd~~~-~d~g----~~~~lD~G~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~~ 430 (573)
|.-.+.|.|-+.. +=++ ...+++-=.|||.++..+ .+++++++||...... ...+|.|.++-+..|.++.
T Consensus 428 dsl~GPy~plng~glVL~~~~P~~~~~~tyS~Ya~p~~~~--~~~~lv~s~i~~r~~~---~~~~~~GTlap~~~vq~~~ 502 (571)
T 2yfr_A 428 DNLTHGYVPLNESGVVLTASVPANWRTATYSYYAVPVEGR--DDQLLITSYITNRGEV---AGKGMHATWAPSFLLQINP 502 (571)
T ss_dssp SSSSSCCEETTTTSEEEECCSCTTSTTCEEEEEEEEETTE--EEEEEEEEEESCSTTT---TCTTCCCEECEEEEEEEET
T ss_pred CCCCCCCeeCCCCceeecCCCCCccccccceeEEEecccC--CCcEEEEEEeCCcCCC---CCcccceeecCcEEEEEcC
Confidence 3345677752210 0000 000111013666665443 3578999999987543 2467999998665566653
Q ss_pred cCCc
Q 008224 431 KTGS 434 (573)
Q Consensus 431 ~~g~ 434 (573)
+|+
T Consensus 503 -dgt 505 (571)
T 2yfr_A 503 -DNT 505 (571)
T ss_dssp -TTE
T ss_pred -CCC
Confidence 454
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-29 Score=272.03 Aligned_cols=261 Identities=16% Similarity=0.184 Sum_probs=182.0
Q ss_pred cCCccee-EECCEEEEEEeeCCCCCCCCCcEEEEEEec----CccCeeecceeccCC-------CCc--CCCcEEeeeEE
Q 008224 131 NDPNGPL-FYKGWYHLFYQYNPDSAVWGNITWGHAVSA----DLIHWLYLPIAMVPD-------QWY--DINGVWTGSAT 196 (573)
Q Consensus 131 NDPNG~~-y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~----DLVhW~~lp~AL~Pd-------~~y--D~~Gv~SGSav 196 (573)
.||.|-+ .++|++++||+..+... ++..||+|+.|+ ||+||++.+. +.|+ .+| +..|||||||+
T Consensus 65 ~d~~G~~~~~~g~~lif~L~~dp~~-~~~~hi~~~ys~~g~~dl~~W~~~G~-vfp~~~~~~~~~~~~~~~~g~WSGSAi 142 (447)
T 1oyg_A 65 QNADGTVANYHGYHIVFALAGDPKN-ADDTSIYMFYQKVGETSIDSWKNAGR-VFKDSDKFDANDSILKDQTQEWSGSAT 142 (447)
T ss_dssp ECTTSSBCCBTTEEEEEEEEECTTC-TTCCEEEEEEEETTCCSGGGCEEEEE-SCCTTHHHHTTCTTGGGCCEEEEEEEE
T ss_pred ECCCCCEEEecCcEEEEEEcCCCCC-CCceEEEEEECcCCCcccCCccCCCe-ecCCCccccccccccCCCCCEECCceE
Confidence 4566655 46889999998765433 577899999999 6799999999 5555 344 36899999998
Q ss_pred EccCCeEEEEEcccCCC--CcceEEEEE-----ecCCCCCCcceEEEeC-CCceecCCCC----------------CCCC
Q 008224 197 ILPDGQIVMLYTGSTDK--SVQVQNLAY-----PADPSDPLLLDWVKYP-GNPVLVPPRH----------------IGPK 252 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~~--~~q~q~lA~-----S~D~~Dp~L~~W~K~~-~nPVl~~p~g----------------~~~~ 252 (573)
++.||+++|||||+... ..|.++.|. +.|+ .+|++.+ .++|+.+.+. -...
T Consensus 143 ~~~dG~i~LfYTg~~~~~~~~q~I~~a~~~l~~~~dg-----v~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~ 217 (447)
T 1oyg_A 143 FTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSS-----LNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNH 217 (447)
T ss_dssp ECTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSC-----EEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCC
T ss_pred ECcCCEEEEEEEeecCCCCCceEEEEEecceeecCCC-----cceecccCCCceEcCCCccccccccccccccccCCCcc
Confidence 76899999999998643 234444333 3332 4444433 2456654321 1246
Q ss_pred CCCCCeeEeecCCCcEEEEEeeecCC------------------------------------------eeEEEEE-EeCC
Q 008224 253 DFRDPTTAWAGPDGKWRLTIGSKIGK------------------------------------------TGISLVY-QTTD 289 (573)
Q Consensus 253 ~fRDP~V~w~~~dG~w~MvvGs~~~~------------------------------------------~G~illY-~S~D 289 (573)
+||||+| |.+ +|+|||++|++... .|+|.|+ .|+|
T Consensus 218 ~fRDP~V-f~d-~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D 295 (447)
T 1oyg_A 218 TLRDPHY-VED-KGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD 295 (447)
T ss_dssp CCEEEEE-EEE-TTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT
T ss_pred ccCCCeE-EeE-CCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC
Confidence 9999999 653 79999999997421 3788776 7999
Q ss_pred CCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC--------cceEEEEEE-ecCCCC
Q 008224 290 FKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT--------KVDHYAIGT-YNPAND 360 (573)
Q Consensus 290 l~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~--------~~~~Y~iG~-~d~~~~ 360 (573)
+.+|++.++|+.+.....|||||++|+++ .||||.+|.... ....|++|- =|.-.+
T Consensus 296 l~~W~~~~pL~~~~~v~d~~EcPdlfk~d---------------GkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~G 360 (447)
T 1oyg_A 296 YTLKKVMKPLIASNTVTDEIERANVFKMN---------------GKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTG 360 (447)
T ss_dssp SSEEEEEEEEEECTTTCSCCEEEEEEEET---------------TEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTC
T ss_pred CCCceEccccccCCCCCCceEcCcEEEEC---------------CEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCC
Confidence 99999999887654445599999999996 278888886432 124787773 344566
Q ss_pred cccCCCCCcccccce----------eeccC-CCcccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEe
Q 008224 361 KWTPDNPEEDVGIGL----------KWDYG-RYYASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429 (573)
Q Consensus 361 ~f~pd~~~~d~g~~~----------~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~ 429 (573)
.|.|-+ |.|+ +++ + .|||.++. + .+++++++||...... .+|.|.++-+..|.|+
T Consensus 361 Py~pln-----gsGlVl~~~~p~~~~~~-~ys~ya~p~~-~--~~~~~v~sf~~~~~~~-----~~~ggtlap~~~v~~~ 426 (447)
T 1oyg_A 361 PYKPLN-----KTGLVLKMDLDPNDVTF-TYSHFAVPQA-K--GNNVVITSYMTNRGFY-----ADKQSTFAPSFLLNIK 426 (447)
T ss_dssp CCEEGG-----GTSEEEEECCCTTCTTC-EEEEEEECCS-S--SSEEEEEEEESCTTSC-----SSCCCEECBCEEEEEE
T ss_pred CCeeCC-----CCceeecCCCCCccccc-cceeEEEecC-C--CCeEEEEEEeCCCCcc-----cccceeecCcEEEEEc
Confidence 777521 1111 222 3 47888887 5 3589999999876432 4699999988778776
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=239.57 Aligned_cols=196 Identities=16% Similarity=0.197 Sum_probs=144.7
Q ss_pred ccCCcc-eeEECCEEEEEEeeCCCCC--CCCCcEE----EEEEecC---------ccCeeecceeccCCC--------Cc
Q 008224 130 MNDPNG-PLFYKGWYHLFYQYNPDSA--VWGNITW----GHAVSAD---------LIHWLYLPIAMVPDQ--------WY 185 (573)
Q Consensus 130 mNDPNG-~~y~~G~YHLFYQ~nP~~~--~wG~~~W----GHAvS~D---------LVhW~~lp~AL~Pd~--------~y 185 (573)
++||+| +++++|+||+|||..|... .|+..|| ||+.|+| |+||++.+.+|.+.. .+
T Consensus 78 l~D~dg~~v~~~G~~~vF~L~a~r~~~~~~~drH~~a~I~~~yskdg~~~~~~~~l~~W~~~G~vf~~g~~~~~~~~~~~ 157 (493)
T 1w18_A 78 LIDKHADQFSYNGWEVIFCLTADPNAGYGFDDRHVHARIGFFYRRAGIPASRRPVNGGWTYGGHLFPDGASAQVYAGQTY 157 (493)
T ss_dssp EECTTCCBEEETTEEEEEEEEECTTSSCCGGGCGGGCEEEEEEEESSCCGGGSCTTCCCEEEEESSCTTGGGGGSTTSCC
T ss_pred EECCCCCEEEECCeEEEEEEecCCccCCCccCCCccceeeeEEecCccccccccccCCceECCccccCCCcccccccccc
Confidence 578999 8889999999999998865 4555444 5999999 899999999986543 35
Q ss_pred CCCcEEeeeEEEc--cCCeEEEEEcccCC----CC----cceEEEEEec-----CCCCCCcceEEEeCCCceecCCCC-C
Q 008224 186 DINGVWTGSATIL--PDGQIVMLYTGSTD----KS----VQVQNLAYPA-----DPSDPLLLDWVKYPGNPVLVPPRH-I 249 (573)
Q Consensus 186 D~~Gv~SGSavv~--~dG~~~~~YTG~~~----~~----~q~q~lA~S~-----D~~Dp~L~~W~K~~~nPVl~~p~g-~ 249 (573)
+..++|||||++. .||+++|||||... ++ ..+|+||.+. +..+..+.+|+|. .+|+.+... +
T Consensus 158 d~~~~WSGSAi~~~~~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~--~~l~~~DG~~Y 235 (493)
T 1w18_A 158 TNQAEWSGSSRLMQIHGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAH--TPLLQPDGVLY 235 (493)
T ss_dssp SEEEEEEEEEEESSTTSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEE--EEEECCCSSSB
T ss_pred CcCCeEcCceEEeccCCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccC--CceeecCcccc
Confidence 6679999999876 79999999999752 11 1257776432 2222346789886 466654211 1
Q ss_pred ------CCCCCCCCeeEeecC--CCcEEEEEeeec--C---------------------------------CeeEEEEE-
Q 008224 250 ------GPKDFRDPTTAWAGP--DGKWRLTIGSKI--G---------------------------------KTGISLVY- 285 (573)
Q Consensus 250 ------~~~~fRDP~V~w~~~--dG~w~MvvGs~~--~---------------------------------~~G~illY- 285 (573)
...+||||+|+ .++ +|+|||+++++. . ..|++.|.
T Consensus 236 qt~~q~~~~~fRDP~vf-~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~ 314 (493)
T 1w18_A 236 QNGAQNEFFNFRDPFTF-EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAI 314 (493)
T ss_dssp CCTTTCTTCCCEEEEEE-ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEE
T ss_pred ccccccCCccccCCEEE-ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEE
Confidence 24689999994 444 499999999863 1 24666444
Q ss_pred -EeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 286 -QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 286 -~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+++|+.+|++.++++.+.....|||||++|+++ .||+|+.|..
T Consensus 315 ~~s~Dl~~We~~~PL~~a~~v~deiErP~V~~~~---------------GkyYLFtSs~ 358 (493)
T 1w18_A 315 ATDSTLSKWKFLSPLISANCVNDQTERPQVYLHN---------------GKYYIFTISH 358 (493)
T ss_dssp ESSTTSCCEEEEEEEEECTTTBSCCEEEEEEEET---------------TEEEEEEEEC
T ss_pred eCCCCCccceecCccccCCCCCCcEECCeEEEEC---------------CEEEEEEEcc
Confidence 456899999999888765556699999999996 2889888754
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=231.14 Aligned_cols=171 Identities=22% Similarity=0.302 Sum_probs=138.5
Q ss_pred cceeeeecCCC--------cccCCcceeEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEecCccCeeecc
Q 008224 118 RTSFHFQPEKN--------WMNDPNGPLFYKGWYHLFYQYNPDSA-------------VWGNITWGHAVSADLIHWLYLP 176 (573)
Q Consensus 118 Rp~yHf~P~~g--------WmNDPNG~~y~~G~YHLFYQ~nP~~~-------------~wG~~~WGHAvS~DLVhW~~lp 176 (573)
|++||+.|..| ||||||++++++|+||||||++|... .|+.++|+||+|+|||||++++
T Consensus 30 f~~~~~~P~~g~~~~~e~~~~~DP~~v~~~dG~Yymfyt~~~~~~~G~~~~~~~~~~~~w~~~~i~~a~S~DLv~W~~~g 109 (374)
T 3r4z_A 30 LFEFDITPLKGDLAYEEGVIRRDPSAVLKVDDEYHVWYTKGEGETVGFGSDNPEDKVFPWDKTEVWHATSKDKITWKEIG 109 (374)
T ss_dssp CEEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSCSCTTSCSSTTTTCEEEEEEESSSSEEEEEE
T ss_pred HHhcccccccCCccccCCcCcCCCCeEEEECCEEEEEEEcCCCcccccccccccccccccCccEEEEEECCCCcCcEeCc
Confidence 88999999999 99999999999999999999987421 3688999999999999999999
Q ss_pred eeccCCC--CcCCCcEEeeeEEEccCCeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCCC--
Q 008224 177 IAMVPDQ--WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-- 248 (573)
Q Consensus 177 ~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g-- 248 (573)
.+|.|.. .||..|||+|+++. .+|+++||||+.... ..+.|++|+|.|+ +..|+|. ++||+.+.+.
T Consensus 110 ~~l~~~~~~~~d~~gvwaPsvi~-~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~----~Gpw~~~-~~Pvi~~~~~~~ 183 (374)
T 3r4z_A 110 PAIQRGAAGAYDDRAVFTPEVLR-HNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSP----FGPWTKS-DAPILSPENDGV 183 (374)
T ss_dssp EEECCCCTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCBEEEEEEESST----TCCCEEC-SSCSBCCCCCSE
T ss_pred ccCCCCCCCCccCCCEECCEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEECCC----CCCeEEC-CCCEeCCCcCCc
Confidence 9999864 78999999999975 699999999997532 3478999999885 3689996 6899976432
Q ss_pred ----------------CCCCCCCCCeeEeecCCCcEEEEEeeecC-----Ce---eEEEEEEeCCCC-CcEEc
Q 008224 249 ----------------IGPKDFRDPTTAWAGPDGKWRLTIGSKIG-----KT---GISLVYQTTDFK-TYELL 296 (573)
Q Consensus 249 ----------------~~~~~fRDP~V~w~~~dG~w~MvvGs~~~-----~~---G~illY~S~Dl~-~W~~~ 296 (573)
+....++||.| ++ .+|+|||++++... .. -.+.+.+|+++. .|+..
T Consensus 184 w~~ddd~~~~~~~~~~~d~~~~~~P~v-~~-~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~Gpw~~~ 254 (374)
T 3r4z_A 184 WDTDEDNRFLVKEKGSFDSHKVHDPCL-MF-FNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPLGPYTKS 254 (374)
T ss_dssp ECSSSSCTTCEEECCSTTSSEEEEEEE-EE-ETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTTCCCEEC
T ss_pred eeecCCceEEEecCCccccCccccceE-EE-ECCEEEEEEEecCCCCccccCCCcceEEEEEECCCCCCCEEC
Confidence 12234689999 44 68999999987631 11 146778888754 69885
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.9e-24 Score=229.18 Aligned_cols=186 Identities=20% Similarity=0.242 Sum_probs=141.3
Q ss_pred CCCcc-ccccccccee-eeecCCC--------cccCCcceeEECCEEEEEEeeCCC-------------CCCCCCcEEEE
Q 008224 107 YNWTN-AMFTWQRTSF-HFQPEKN--------WMNDPNGPLFYKGWYHLFYQYNPD-------------SAVWGNITWGH 163 (573)
Q Consensus 107 ~~~~~-~~~~w~Rp~y-Hf~P~~g--------WmNDPNG~~y~~G~YHLFYQ~nP~-------------~~~wG~~~WGH 163 (573)
+.|.. .--.| ||.| |++|..| ++|||||+++++|+||||||++|. ...|+.++|+|
T Consensus 63 ~~~~~~~~~~~-~~~~~~~~p~~g~~~~~~~v~~~DP~~vi~~dG~Yylfyt~~~~~~~G~~~~~~~~~~~p~~~~~i~~ 141 (408)
T 3p2n_A 63 LKWPTDLGNEW-FIQFGPLQPLKGDLAYEEGVVRRDPSAIIKENGKYYVWYSKSTGPTQGFGGDIEKDKVFPWDRCDIWY 141 (408)
T ss_dssp HHSCTTCCSTT-CEEECCCEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEE
T ss_pred hcCCcccCCch-hhcccccCCcCCCccccCCcEeCCCCEEEEECCEEEEEEEeCCCcccccccccccccccccccceEEE
Confidence 45642 34456 9999 9999999 999999999999999999998762 12356789999
Q ss_pred EEecCccCeeecceeccCCC--CcCCCcEEeeeEEEccCCeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEe
Q 008224 164 AVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 164 AvS~DLVhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
|+|+||+||++.+.+|.|.. .||..+||+++++. .+|+++||||+.... ..+.+++|++... .+. |++.
T Consensus 142 A~S~Dlv~W~~~g~~l~~~~~~~wd~~gv~aPsVi~-~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~---DG~-W~~~ 216 (408)
T 3p2n_A 142 ATSEDGWTWKEEGPAVTRGEKGAYDDRSVFTVEIMK-WEDKYYLCYQTVKSPYNVRVKNQVGLAWADSP---DGP-WTKS 216 (408)
T ss_dssp EEESSSSEEEEEEEEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSSCCTTCCCEEEEEEESST---TCC-CEEC
T ss_pred EEcCCCCeeeEeCceeCCCCCCCcccCceEeeEEEE-ECCEEEEEEEeecCCCCCcCCCceEEEEEECC---CCC-EEEC
Confidence 99999999999999998865 78999999999875 799999999996421 1245667666543 235 9997
Q ss_pred CCCceecCC------------------CCCCCCCCCCCeeEeecCCCcEEEEEeeecC------C--eeEEEEEEeCCCC
Q 008224 238 PGNPVLVPP------------------RHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG------K--TGISLVYQTTDFK 291 (573)
Q Consensus 238 ~~nPVl~~p------------------~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~------~--~G~illY~S~Dl~ 291 (573)
++||+.+. ..++...+++|.|+ + .+|+|||++.+... . .-.+.+.+|+|+.
T Consensus 217 -~~pli~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~-~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~ 293 (408)
T 3p2n_A 217 -EEPILSPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-P-YKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK 293 (408)
T ss_dssp -SSCSBCCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT
T ss_pred -CcceeCCCCCceEEEecCCcccccccceecCCCeEcceEE-E-ECCEEEEEEEcccCccccccCCCccEEEEEEECCCC
Confidence 57887653 23334457899994 3 58999999987631 1 1346688999987
Q ss_pred -CcEEcc--cccc
Q 008224 292 -TYELLD--EYLH 301 (573)
Q Consensus 292 -~W~~~~--~l~~ 301 (573)
.|+... +++.
T Consensus 294 Gpw~k~~~nPVl~ 306 (408)
T 3p2n_A 294 GPYVKSPYNPISN 306 (408)
T ss_dssp CCCEECTTCCSCS
T ss_pred CCcEECCCCCccc
Confidence 899864 4543
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=223.99 Aligned_cols=171 Identities=20% Similarity=0.251 Sum_probs=134.6
Q ss_pred cceeeeecCCC-------cc-cCCcceeEECCEEEEEEeeCCCCC-------------CCCCcEEEEEEecCccCeeecc
Q 008224 118 RTSFHFQPEKN-------WM-NDPNGPLFYKGWYHLFYQYNPDSA-------------VWGNITWGHAVSADLIHWLYLP 176 (573)
Q Consensus 118 Rp~yHf~P~~g-------Wm-NDPNG~~y~~G~YHLFYQ~nP~~~-------------~wG~~~WGHAvS~DLVhW~~lp 176 (573)
+++||.+|..| || |||||+++++|+||||||++|... .|+.++|+||+|+||+||++++
T Consensus 70 f~r~~~~Pi~g~~~~~~g~~~~DP~~v~~~dG~yymfY~~~~~~~~G~~~~~~~~~~~~~~~~~i~~a~S~Dlv~W~~~g 149 (404)
T 4ak5_A 70 FFEYKMEPLKGDLAYEEGVVRRDPSAMLKIGDTYYVWYSKSYGPTQGFAGDIEKDKVFPWDRCDIWYATSKDGLTWKEQG 149 (404)
T ss_dssp CCEEEEEECEETTSCCTTEEEECCCCBEEETTEEEEEEEEEESCCCCSSSCTTTSCCSTTTTCEEEEEEESSSSEEEEEE
T ss_pred hhhcccccccCCcccccceeecCCcEEEEECCEEEEEEEeCCCcccccccccccccccccCccEEEEEECCCCCCceeCc
Confidence 66677666555 87 999999999999999999998411 3678999999999999999999
Q ss_pred eeccCC--CCcCCCcEEeeeEEEccCCeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCCC--
Q 008224 177 IAMVPD--QWYDINGVWTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH-- 248 (573)
Q Consensus 177 ~AL~Pd--~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g-- 248 (573)
.+|.|+ ..||..+||+++++. .+|+++|+||+.... ..+.+++|+|.+.. ..|++. ++|||.+.+.
T Consensus 150 ~~L~~~~~~~wd~~gv~aP~Vi~-~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~----Gpwt~~-~~Pvl~~~~~~~ 223 (404)
T 4ak5_A 150 IAVKRGEKGAYDDRSVFTPEVME-WKGKYYLCYQAVKSPYTVRVKNTIGMACADSPE----GLWTKT-DKPVLEPSDTGE 223 (404)
T ss_dssp EEECCCSTTSTTSSEEEEEEEEE-ETTEEEEEEEEECSCCCTTCCCEEEEEEESSTT----CCCEEC-SSCSBCCCSCCE
T ss_pred eEeecCCCCccccCCEEeeEEEE-ECCEEEEEEEeccCCCCCCCcceEEEEEEeCCC----CCceEC-CCceecCCCCcc
Confidence 999985 478999999999975 699999999997542 34678999998743 379995 6899976432
Q ss_pred ----------------CCCCCCCCCeeEeecCCCcEEEEEeeec-C----C---eeEEEEEEeCCCC-CcEEc
Q 008224 249 ----------------IGPKDFRDPTTAWAGPDGKWRLTIGSKI-G----K---TGISLVYQTTDFK-TYELL 296 (573)
Q Consensus 249 ----------------~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~----~---~G~illY~S~Dl~-~W~~~ 296 (573)
++...++||.|+ + .+|+|||++.+.. + . .-.+.+..|+|+. .|+..
T Consensus 224 W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~-~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~~Gpw~k~ 294 (404)
T 4ak5_A 224 WEGDEDNRFKVVSKGDFDSHKVHDPCII-P-YNGKFYMYYKGERMGEEITWGGREIKHGVAIAENPMGPYVKS 294 (404)
T ss_dssp ECSSSSCTTCEEECCSTTSSEEEEEEEE-E-ETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTTCCCEEC
T ss_pred eeeccCceeeeccCCcccCCcEECCEEE-E-ECCEEEEEEECCCCCCccccCCCcceEEEEEECCCCCCcEEC
Confidence 123456899984 3 5899999998752 1 1 1257788999986 89975
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=217.57 Aligned_cols=188 Identities=13% Similarity=0.062 Sum_probs=145.4
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeec-ceeccCC--CCcCCCcE-EeeeEEEccCCe
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYL-PIAMVPD--QWYDINGV-WTGSATILPDGQ 202 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~l-p~AL~Pd--~~yD~~Gv-~SGSavv~~dG~ 202 (573)
.|.+| +|+++++|+||||||.++. ++.++||||+|+|++||++. +++|.|+ ..++..|| |+++++. .+|+
T Consensus 54 ~gv~n--~~~i~~~g~~~lfY~~~~~---~~~~~~~~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~g~~yDP~v~~-~~d~ 127 (338)
T 1vkd_A 54 ARVFN--SAVVPYNGEFVGVFRIDHK---NTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDT 127 (338)
T ss_dssp EEEEE--EEEEEETTEEEEEEEEEET---TSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTE
T ss_pred CeEEc--cEEEEECCEEEEEEEEECC---CCcEEEEEEEeCCCCccEECCCCEEeCCCCCccccCCEEeCcEEEE-ECCE
Confidence 45556 5789999999999999984 46799999999999999987 5788888 67888999 8999975 6889
Q ss_pred EEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeec-CCCcEEEEEeeec---CC
Q 008224 203 IVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG-PDGKWRLTIGSKI---GK 278 (573)
Q Consensus 203 ~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~-~dG~w~MvvGs~~---~~ 278 (573)
++|+||+ .. ..+.|++|.|+|. ++|+|.+ +++ .+ .+|||.+ |.+ .+|+|+|+.+.+. +.
T Consensus 128 yym~yt~-~~-~~~~i~la~S~Dl-----~~W~~~~--~i~-~~------~~rd~~~-fp~~i~Gky~m~~~~q~~~~~~ 190 (338)
T 1vkd_A 128 YYITFCT-DD-HGPTIGVGMTKDF-----KTFVRLP--NAY-VP------FNRNGVL-FPRKINGKYVMLNRPSDNGHTP 190 (338)
T ss_dssp EEEEEEE-ES-SSEEEEEEEESSS-----SSEEEEC--CSS-SS------SEEEEEE-CSSCBTTBEEEEEEECCSSSCS
T ss_pred EEEEEEE-cC-CcceEEEEEECCC-----CeEEECC--ccC-CC------cCCceEE-EEEEECCEEEEEEEecCCCCCC
Confidence 9999999 55 4678999999984 8999963 443 21 4689977 653 3899999997652 35
Q ss_pred eeEEEEEEeCCCCCcEEcccccccCCCCC-cee------eecEEEecccCcccceeccCCCCeEEEEEeeeCC--CcceE
Q 008224 279 TGISLVYQTTDFKTYELLDEYLHAVPGTG-MWE------CVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD--TKVDH 349 (573)
Q Consensus 279 ~G~illY~S~Dl~~W~~~~~l~~~~~~~G-mWE------CPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~--~~~~~ 349 (573)
.|.+.+++|+||.+|+..+.++.. ..+ ||| ||+.|+++. .|+|..+... .....
T Consensus 191 ~~~I~~a~S~Dl~~W~~~~~l~~~--~~~~~wE~~~ig~gp~~i~~~~---------------gwll~y~G~~~~~~~~~ 253 (338)
T 1vkd_A 191 FGDIFLSESPDMIHWGNHRFVLGR--SSYNWWENLKIGAGPYPIETSE---------------GWLLIYHGVTLTCNGYV 253 (338)
T ss_dssp CCCEEEEEESSSSCBEEEEEEECC--CSSCGGGSSEEEECSCCEEETT---------------EEEEEEEEEEEETTEEE
T ss_pred CcEEEEEEcCCcccCCcCceEEcC--CCCCCcccCccccCCCcEEeCC---------------cEEEEEecccCCCCCcE
Confidence 678999999999999987776532 234 999 699998852 3666655322 12356
Q ss_pred EEEEE
Q 008224 350 YAIGT 354 (573)
Q Consensus 350 Y~iG~ 354 (573)
|.+|-
T Consensus 254 Y~~G~ 258 (338)
T 1vkd_A 254 YSFGA 258 (338)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88885
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=203.89 Aligned_cols=189 Identities=16% Similarity=0.186 Sum_probs=143.0
Q ss_pred CcccCCcceeEEC--CEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEcc---C
Q 008224 128 NWMNDPNGPLFYK--GWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATILP---D 200 (573)
Q Consensus 128 gWmNDPNG~~y~~--G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~---d 200 (573)
||++||+ +++.+ |+||||+++.+. +.|+..+|+|++|+||+||+..+.+|.+.. .++..++|+++++..+ +
T Consensus 13 g~~~DP~-i~~~~~dg~yyl~~t~~~~-~~~~~~~~~~~~S~DLv~W~~~g~~l~~~~~~~~~~~~~wAP~v~~~~~~~~ 90 (311)
T 3qz4_A 13 GFHADPE-VLYSHQTKRYYIYPTSDGF-PGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGNAWAPCIEEKKIDGK 90 (311)
T ss_dssp SSEEEEE-EEEETTTTEEEEEEEECSS-GGGCCCEECCEEESSSSSCEECCCCEEBTTTBTTEEEEEEEEEEEEEEETTE
T ss_pred CCcCCce-EEEECCCCEEEEEEecCCC-CCCCCcEEEEEECCCCCCcEECceecccccCCCcccCCcCCCeeEEeeecCC
Confidence 7899999 88887 999999998765 457788999999999999999999998764 5667899999997643 9
Q ss_pred CeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecC-CCcEEEEEeeecCC
Q 008224 201 GQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP-DGKWRLTIGSKIGK 278 (573)
Q Consensus 201 G~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~-dG~w~MvvGs~~~~ 278 (573)
|+++|+||+.... ..+.+++|+|+|+. ..|++ .++||+...+. ....+|||++++ ++ +|++||++|+
T Consensus 91 Gkyylyyt~~~~~~~~~~i~va~s~~p~----Gpw~~-~~~p~~~~~~~-g~~~~iDp~vf~-dd~dG~~yl~~g~---- 159 (311)
T 3qz4_A 91 YKYFFYYSANPTTNKGKQIGVAVADSPT----GPFTD-LGKPIITSSPT-GRGQQIDVDVFT-DPVSGKSYLYWGN---- 159 (311)
T ss_dssp EEEEEEEEEEETTCSSCEEEEEEESSTT----CCCEE-CSSCSBCSCTT-SSSBSCCCEEEE-CTTTCCEEEEECB----
T ss_pred CEEEEEEEeccCCCCCeeEEEEEECCCC----CCceE-CCcceEcCCCC-CCcccccccEEE-ECCCCcEEEEEcC----
Confidence 9999999997543 35788999998753 57998 46788864321 135789999954 45 8999999986
Q ss_pred eeEEEEEE-eCCCCCcEEcccccccCCC-----CCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC
Q 008224 279 TGISLVYQ-TTDFKTYELLDEYLHAVPG-----TGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345 (573)
Q Consensus 279 ~G~illY~-S~Dl~~W~~~~~l~~~~~~-----~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~ 345 (573)
|.+.+.+ ++|+.+|.-....+....+ ..+.|||.+|+.+ .+++|..|....
T Consensus 160 -~~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~---------------g~YyL~~s~~~~ 216 (311)
T 3qz4_A 160 -GYMAGAELNDDMLSIKEETTVVLTPKGGTLQTYAYREAPYVIYRK---------------GIYYFFWSVDDT 216 (311)
T ss_dssp -SSCEEEEBCTTSSSBCGGGCEECCCCCCCTTTTCCCEEEEEEEET---------------TEEEEEEEESCT
T ss_pred -CCEEEEEeCCcccccCCCceEEeCCCCCcccccceeeccEEEEEC---------------CEEEEEEEcCCC
Confidence 2344555 7888887643222211111 2379999999985 278888887653
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-21 Score=200.70 Aligned_cols=149 Identities=19% Similarity=0.231 Sum_probs=115.9
Q ss_pred ceeEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeecc-eeccCCCCcCC-----CcEEeeeEEEccCCeEEE
Q 008224 135 GPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYLP-IAMVPDQWYDI-----NGVWTGSATILPDGQIVM 205 (573)
Q Consensus 135 G~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLVhW~~lp-~AL~Pd~~yD~-----~Gv~SGSavv~~dG~~~~ 205 (573)
|+++++|+||||||.++.... ++.++||||+|+|+|||++.+ ++|.|+..++. .||++++++..+||+++|
T Consensus 57 ~ai~~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DGi~w~~~~~Pvl~P~~~~~~~~e~~~gv~DP~v~~~edG~yym 136 (364)
T 3qc2_A 57 AATLYNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDGTHFQREKTPVFYPDNDSQKELEWPGGCEDPRIAVTDDGLYVM 136 (364)
T ss_dssp EEEEETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEE
T ss_pred eEEEECCEEEEEEEEECCCCcccCCCceEEEEEEeCCCceeeEcCcCeEcCCCccccccccCCcEECCEEEEeCCCEEEE
Confidence 478899999999999998654 367999999999999999854 68999887653 799999998656899999
Q ss_pred EEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCC--CCCCCCCCCCeeE--------e-ecCCCcEEEEEee
Q 008224 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR--HIGPKDFRDPTTA--------W-AGPDGKWRLTIGS 274 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~--g~~~~~fRDP~V~--------w-~~~dG~w~MvvGs 274 (573)
+||+... ..+.|++|+|+|. ++|+|.+ +++.+.. .+....++|+.++ + ...+|+|+|+.|.
T Consensus 137 ~Yta~~~-~~~~i~lA~S~Dl-----~~W~k~g--~i~~p~~~g~f~~~~~kd~~i~~~~r~~~lfp~ki~GkY~M~~g~ 208 (364)
T 3qc2_A 137 MYTQWNR-HVPRLAVATSRNL-----KDWTKHG--PAFAKAFDGKFFNLGCKSGSILTEVVKGKQVIKKVNGKYFMYWGE 208 (364)
T ss_dssp EEEEECS-SCEEEEEEEESSS-----SSCEEEE--ETTSSHHHHTTTTCCCCCEEEEEEEETTEEEECEETTEEEEEECS
T ss_pred EEEecCC-CCeEEEEEEECCC-----CEEEEee--eccCccccccccccccccceeeeeccccceeeEEECCEEEEEEcC
Confidence 9999754 3578999999984 8999973 5553310 1122345677652 1 2368999999862
Q ss_pred ecCCeeEEEEEEeCCCCCcEEc
Q 008224 275 KIGKTGISLVYQTTDFKTYELL 296 (573)
Q Consensus 275 ~~~~~G~illY~S~Dl~~W~~~ 296 (573)
+.|.+++|+||++|+..
T Consensus 209 -----~~I~la~S~Dl~~W~~~ 225 (364)
T 3qc2_A 209 -----EHVFAATSDDLIHWTPI 225 (364)
T ss_dssp -----SSBEEEEESSSSSEEEC
T ss_pred -----CeEEEEeCCCcccceEc
Confidence 55778999999999974
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.2e-20 Score=191.02 Aligned_cols=198 Identities=15% Similarity=0.105 Sum_probs=145.0
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCC---CCCCCcEEEEEEecCccCeeecceeccCC-CCcCCCcEEeeeEEEccCCeE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDS---AVWGNITWGHAVSADLIHWLYLPIAMVPD-QWYDINGVWTGSATILPDGQI 203 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~---~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd-~~yD~~Gv~SGSavv~~dG~~ 203 (573)
.+.+||+. +.++|+||||+++.+.. ..++...|.+++|+||+||+..+.+|.+. ..++..++|+++++. .||++
T Consensus 10 ~~~~DP~i-~~~~g~yYl~~t~~~~~~~~~~~~~~~~~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~WAP~i~~-~~Gky 87 (307)
T 3qee_A 10 VFTADPAA-LVHKGRVYLYAGRDEAPDNTTFFVMNEWLVYSSDDMANWEAHGPGLRAKDFTWAKGDAWASQVIE-RNGKF 87 (307)
T ss_dssp SEEEEEEE-EEETTEEEEEEEEECCSSSSSCCCEEEEEEEEESSSSSCEEEEEEEEGGGSTTEEEEEEEEEEEE-ETTEE
T ss_pred CccCCCce-EEECCEEEEEEccCcccCCccccccCcEEEEECCCCCCceECccccccCCCCcccCCccCceEEE-ECCEE
Confidence 36799995 45899999999988753 45667889999999999999999999864 356678999999875 79999
Q ss_pred EEEEcccCCCC--cceEEEEEecCCCCCCcceEEEeCCCceecCCC-C--CCCCCCCCCeeEeecCCCcEEEEEeeecCC
Q 008224 204 VMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR-H--IGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (573)
Q Consensus 204 ~~~YTG~~~~~--~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~-g--~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~ 278 (573)
+|+||+...+. .+.+++|+|.+.. ..|++..++|++.... . -...++|||++++ ++||++||++|+.
T Consensus 88 ylyyt~~~~~~~~~~~i~va~s~~p~----Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~-DddG~~Yl~~g~~--- 159 (307)
T 3qee_A 88 YWYVTVRHDDTKPGFAIGVAVGDSPI----GPFKDALGKALITNDMTTDTPIDWDDIDPSVFI-DDDGQAYLFWGNT--- 159 (307)
T ss_dssp EEEEEEEECTTSCSEEEEEEEESSTT----CCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEE-CTTSCEEEEECSS---
T ss_pred EEEEEeccCCCCCceEEEEEEECCCC----CCCEeCCCCeeEecCccccCCCCcCcccCceEE-CCCCCEEEEEeCC---
Confidence 99999875432 3678999998753 5799965678875311 1 1123589999954 5789999999864
Q ss_pred eeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEEEEE
Q 008224 279 TGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIG 353 (573)
Q Consensus 279 ~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y~iG 353 (573)
++.++--|+|+.+|.-....+. ...+++|||.+|+.+ .+++|..|........|+..
T Consensus 160 -~i~~~~l~~d~~~~~g~~~~i~--~~~~~~EgP~i~k~~---------------g~YyL~~s~~~~~~~~~~~s 216 (307)
T 3qee_A 160 -RPRYAKLKKNMVELDGPIRAIE--GLPEFTEAIWVHKYQ---------------DNYYLSYAMGFPEKIGYAMG 216 (307)
T ss_dssp -SCEEEEECTTSSSEEEEEEECC--CCTTEEEEEEEEECC----------------CEEEEEEETTTTEEEEEEE
T ss_pred -cEEEEEECCccccccCceEEeC--CCCCccCceEEEEEC---------------CEEEEEEECCCCcEEEEEEC
Confidence 3333344889998864332222 124589999999975 26888888754444556554
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-21 Score=207.79 Aligned_cols=197 Identities=16% Similarity=0.173 Sum_probs=140.3
Q ss_pred ccCCcc-eeEECCEEEEEEeeCCCCCCC----CCcEEEEEEec---------CccCeeecceeccCCC--------CcCC
Q 008224 130 MNDPNG-PLFYKGWYHLFYQYNPDSAVW----GNITWGHAVSA---------DLIHWLYLPIAMVPDQ--------WYDI 187 (573)
Q Consensus 130 mNDPNG-~~y~~G~YHLFYQ~nP~~~~w----G~~~WGHAvS~---------DLVhW~~lp~AL~Pd~--------~yD~ 187 (573)
+.|+.| ++-++|++|+|++..|....| ..+..||..++ |+.+|++.+.++.++. .++.
T Consensus 80 lqd~~g~~~~~~Gy~lvf~L~a~~~~~~~drH~~a~iglfy~k~G~~~~~s~d~~~W~~~G~vf~~~~~~~~~~~~~~~~ 159 (496)
T 3vss_A 80 LTDEDANQYSVNGWEIIFSLVADRNLGFDDRHVFAKIGYFYRPAGVPAAERPENGGWTYGGLVFKEGVTGQIFEDQSFSH 159 (496)
T ss_dssp EECTTCCBEEETTEEEEEEEEEETTSCGGGGGGGCEEEEEEEESSCCTTTSCTTCCCEEEEESSCTTSGGGGCSCTTCSE
T ss_pred eECCCCCEEEECCEEEEEEEEcCCCCCCCcCcceeEEeeeeccCCcccccCcccCCcEECccccCCCCCcccccCCCccC
Confidence 478887 677899999999976654434 34667896655 5679999988875542 2233
Q ss_pred CcEEeeeEEEccCCeEEEEEcccCC--------CCcceEEEEEecCC--CCCCcceEEEeCCCceecCCCC--------C
Q 008224 188 NGVWTGSATILPDGQIVMLYTGSTD--------KSVQVQNLAYPADP--SDPLLLDWVKYPGNPVLVPPRH--------I 249 (573)
Q Consensus 188 ~Gv~SGSavv~~dG~~~~~YTG~~~--------~~~q~q~lA~S~D~--~Dp~L~~W~K~~~nPVl~~p~g--------~ 249 (573)
..-|||||++.+||++.||||+... ...+.|+||.+... .|.....|++.+.+++|..+.+ .
T Consensus 160 ~~eWSGSAi~~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~ 239 (496)
T 3vss_A 160 QTQWSGSARVSKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQN 239 (496)
T ss_dssp EEEEEEEEEECTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTC
T ss_pred CceEecceEECCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccc
Confidence 4579999998899999999998631 12456777764311 1122478888877777755433 1
Q ss_pred CCCCCCCCeeEeec--CCCcEEEEEeeecC-----------------------------------CeeEEEE--EEeCCC
Q 008224 250 GPKDFRDPTTAWAG--PDGKWRLTIGSKIG-----------------------------------KTGISLV--YQTTDF 290 (573)
Q Consensus 250 ~~~~fRDP~V~w~~--~dG~w~MvvGs~~~-----------------------------------~~G~ill--Y~S~Dl 290 (573)
...+||||+| |++ .+|.+||++.+... ..|+|.| ++|+|+
T Consensus 240 ~~~~fRDP~v-f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~D~ 318 (496)
T 3vss_A 240 EFFNFRDPFT-FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNKQL 318 (496)
T ss_dssp TTCCCEEEEE-ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESSTTS
T ss_pred cccccCCCee-EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCCCC
Confidence 3467999999 554 46889999865310 2466544 468999
Q ss_pred CCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeee
Q 008224 291 KTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 342 (573)
Q Consensus 291 ~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~ 342 (573)
..|++.++|+.+....+|||||++|+++ .||||+.+.
T Consensus 319 ~~We~~~PL~~a~~v~deiErP~vf~~d---------------GKyYLFt~s 355 (496)
T 3vss_A 319 TEWEFLPPILSANCVTDQTERPQIYFKD---------------GKSYLFTIS 355 (496)
T ss_dssp CCEEEEEEEEEEETTBSCCEEEEEEEET---------------TEEEEEEEE
T ss_pred CccEEeCccccCCCCCCceeCCcEEEEC---------------CEEEEEEec
Confidence 9999999998765556799999999996 288888774
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-19 Score=182.69 Aligned_cols=182 Identities=15% Similarity=0.113 Sum_probs=131.0
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC-------CCcEEeeeEEEccCC
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD-------INGVWTGSATILPDG 201 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD-------~~Gv~SGSavv~~dG 201 (573)
+++||+. ++++|+||||++. ..|+|++|+||+||+..+.||.+...++ ..++|+++++. .+|
T Consensus 6 ~~~DP~i-~~~~g~yyl~~t~---------~~i~~~~S~DL~~W~~~g~~l~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 74 (318)
T 1gyh_A 6 DVHDPVM-TREGDTWYLFSTG---------PGITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKG 74 (318)
T ss_dssp CCSSCEE-EEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETT
T ss_pred ecCCCEE-EEECCEEEEEECC---------CCcEEEECCCCCCccCCCcccCCCcccccccCCCcCcccccCeEEE-ECC
Confidence 6899995 7889999999997 2589999999999999999998876555 47899999975 699
Q ss_pred eEEEEEcccCCC-CcceEEEEEecCCCCCCcc--eEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC
Q 008224 202 QIVMLYTGSTDK-SVQVQNLAYPADPSDPLLL--DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK 278 (573)
Q Consensus 202 ~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~--~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~ 278 (573)
+++|+||+.... ..+.|++|++++. ||..- +|++. ++|+...+.....++|||+|++ +++|++||+.|+..
T Consensus 75 ~~ylyyt~~~~~~~~~~igva~s~~~-dp~gp~~~w~~~--~~v~~~~~~~~~~~~iDp~vf~-D~dG~~Yl~~g~~~-- 148 (318)
T 1gyh_A 75 LFYLYYSVSAFGKNTSAIGVTVNKTL-NPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFW-- 148 (318)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEE-CTTSCEEEEECBST--
T ss_pred EEEEEEEeccCCCCcceEEEEEeCCC-CCCCCCcceecC--CcccccCCCCCCCCcccCCeEE-CCCCCEEEEeeccC--
Confidence 999999987543 3577889999862 34321 39885 4666542222335689999954 57899999998742
Q ss_pred eeEEEEEE-eCC------CCCcEEcc----c--ccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 279 TGISLVYQ-TTD------FKTYELLD----E--YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 279 ~G~illY~-S~D------l~~W~~~~----~--l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+.+.+++ +.| +..|+... . +........++|||.+|+.+ .+++|..|..
T Consensus 149 -~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~---------------g~yYL~~s~~ 210 (318)
T 1gyh_A 149 -GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG---------------DYYYLFASWG 210 (318)
T ss_dssp -TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET---------------TEEEEEEEES
T ss_pred -CCEEEEEeCCccccccceeecceecccCcceeecccCCCCcceeccEEEEEC---------------CEEEEEEEeC
Confidence 2345666 455 34676531 1 11111233589999999985 2788888764
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-18 Score=176.41 Aligned_cols=183 Identities=15% Similarity=0.071 Sum_probs=131.1
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC-------CCcEEeeeEEEccCC
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD-------INGVWTGSATILPDG 201 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD-------~~Gv~SGSavv~~dG 201 (573)
+++||+ +++++|+||||++..+. ...|.+++|+||+||+..+.||.+...|+ ..++|+++++. .+|
T Consensus 11 ~~~DP~-i~~~~g~yYl~~t~~~~-----~~~i~i~~S~DLv~W~~~g~~l~~~~~w~~~~~~~~~~~~wAP~v~~-~~G 83 (293)
T 1uv4_A 11 LLHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNG 83 (293)
T ss_dssp ECSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETT
T ss_pred cCCCCe-EEEECCEEEEEEcCCCC-----CCceEEEECCCCCCccCCCccCCCCCcccccccccCCCceecceEEE-ECC
Confidence 578999 56679999999998652 35799999999999999999998875443 46899999975 699
Q ss_pred eEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee
Q 008224 202 QIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (573)
Q Consensus 202 ~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G 280 (573)
+++|+||+.... ..+.+++|+|+|+. ...|++. .++|..++. ...++|||+|++ +++|++||+.|+.. .+
T Consensus 84 ~yylyyt~~~~~~~~~~i~va~s~~p~---~Gpw~~~--~~~l~~~~~-~~~~~iDp~vf~-d~dG~~Yl~~g~~~--~~ 154 (293)
T 1uv4_A 84 KYWLYYSVSSFGSNTSAIGLASSTSIS---SGGWKDE--GLVIRSTSS-NNYNAIDPELTF-DKDGNPWLAFGSFW--SG 154 (293)
T ss_dssp EEEEEEEECCTTCSCEEEEEEEESCTT---TTCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST--TC
T ss_pred EEEEEEEecCCCCCcceEEEEECCCCC---CCCCccC--CccEecCCC-CCCCCCCCCeEE-CCCCCEEEEEEecC--CC
Confidence 999999987543 35678999998751 1379885 344443221 234789999954 57899999998642 23
Q ss_pred EEEEEE-eCCCCCcEEccc-ccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 281 ISLVYQ-TTDFKTYELLDE-YLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 281 ~illY~-S~Dl~~W~~~~~-l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+.+++ +.|+..+.-... +........++|||.+|+.+ .+++|..|..
T Consensus 155 -i~~~~l~~d~~~~~g~~~~i~~~~~~~~~~EgP~i~k~~---------------g~yyL~~s~~ 203 (293)
T 1uv4_A 155 -IKLTKLDKSTMKPTGSLYSIAARPNNGGALEAPTLTYQN---------------GYYYLMVSFD 203 (293)
T ss_dssp -EEEEEECTTTCSEEEEEEEEECCTTTTTCEEEEEEEEET---------------TEEEEEEEEE
T ss_pred -EEEEEECchhCccCCcceEEeecCCCCCccCccEEEEEC---------------CEEEEEEEeC
Confidence 44555 567766542211 22222234589999999985 2788888764
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.79 E-value=9.6e-19 Score=179.81 Aligned_cols=179 Identities=16% Similarity=0.123 Sum_probs=134.6
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEE-ccCCeEEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATI-LPDGQIVMLY 207 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv-~~dG~~~~~Y 207 (573)
..-||+ ++.++|+||||++..+. ....|.+++|+||+||+..+.+|.+...++..|+|.++++. ..+|+++|+|
T Consensus 23 ~~~DP~-i~~~~g~yyl~~t~~~~----~~~~i~~~~S~DLv~W~~~g~~l~~~~~~~~~~~wAP~v~~~~~~g~~yl~y 97 (306)
T 3kst_A 23 PIADPY-VMFYNNKYYAYGTGGTT----AGEGFACFSSDDLKNWKREGQALSATDSYGTWGFWAPEVYYVESKKKFYLFY 97 (306)
T ss_dssp CCEEEE-EEEETTEEEEEEESCCS----SSSEEEEEEESSSSEEEEEEEEEEGGGSSCSSCCEEEEEEEETTTTEEEEEE
T ss_pred cCCCCE-EEEECCEEEEEEecCCc----CCCCEEEEEeCCccccEECceecCCCCcccccccccCeEEEECCCCEEEEEE
Confidence 578999 55669999999997653 23579999999999999999999887777888999999863 3599999999
Q ss_pred cccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEe
Q 008224 208 TGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQT 287 (573)
Q Consensus 208 TG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S 287 (573)
|+. +.+++|+++++. ..|++....|++. ..++||.++ .++||++||+.|+..++.++.+..-|
T Consensus 98 t~~-----~~i~va~s~~p~----Gpw~~~~~~p~~~-------~~~iDp~vf-~D~dG~~Yl~~~~~~~g~~i~~~~ls 160 (306)
T 3kst_A 98 SAE-----EHICVATSTTPE----GPFRQEVKQPIWS-------EKSIDTSLF-IDDDGTPYLYFVRFTDGNVIWVAQMT 160 (306)
T ss_dssp EET-----TEEEEEEESSTT----CCCBCSSCCCSSS-------SCCEEEEEE-ECTTSCEEEEEEEESSSEEEEEEEBC
T ss_pred ECC-----CcEEEEEcCCCC----CCcEeCCCccccC-------CCcccceEE-EeCCCCEEEEEEEeCCCCEEEEEEeC
Confidence 985 468999998753 4788765567653 467999995 45789999999865444444444458
Q ss_pred CCCCCcEEcccc-c-cc-----CCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 288 TDFKTYELLDEY-L-HA-----VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 288 ~Dl~~W~~~~~l-~-~~-----~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
+|+..|...... + .. ..+..++|||.+|+.+ .+++|..|...
T Consensus 161 ~d~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i~k~~---------------G~YYL~~S~~~ 209 (306)
T 3kst_A 161 DDLMSIKTETLNQCIKAEVSWELLQGKVAEGPSLLKKN---------------GVYYLIYSANH 209 (306)
T ss_dssp TTSSCBCGGGCEEEECCCSGGGCSSSSBEEEEEEEEET---------------TEEEEEEEESC
T ss_pred cccccccCcceeeeccCCccceecCCCceecceEEEEC---------------CEEEEEEEeCC
Confidence 999998743221 1 11 1124599999999985 27888888654
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=183.59 Aligned_cols=144 Identities=22% Similarity=0.290 Sum_probs=111.7
Q ss_pred ceeEECCEEEEEEeeCCCCCC---CCCcEEEEEEecCccCeeec-ceeccCCCCcC-----CCcEEeeeEEEccCCeEEE
Q 008224 135 GPLFYKGWYHLFYQYNPDSAV---WGNITWGHAVSADLIHWLYL-PIAMVPDQWYD-----INGVWTGSATILPDGQIVM 205 (573)
Q Consensus 135 G~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLVhW~~l-p~AL~Pd~~yD-----~~Gv~SGSavv~~dG~~~~ 205 (573)
++++++|+||||||.++.... ++.++||||+|+|++||++. .++|.|+..++ ..+|++++++..+||+++|
T Consensus 54 sai~~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dgi~w~~~~~pvl~p~~~~~~~~~~~~~~~DP~v~~~~dg~y~m 133 (356)
T 3taw_A 54 AATIYDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDGIHFERDTKPAFYPAKDNQAENECPGGTEDPRIAMTEDGTYVL 133 (356)
T ss_dssp EEEEETTEEEEEEEEECSSSCSTTSSCEEECCEEESSSSSCEECSSCSBCCCSSTTHHHHTTTEEEEEEEEECTTSCEEE
T ss_pred EEEEECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCCccceECCcceecCCCccccccccCCceECCEEEEECCCEEEE
Confidence 477899999999999987643 25689999999999999984 47888887643 4799999998656899999
Q ss_pred EEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCC----------------CeeEeecCCCcEE
Q 008224 206 LYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRD----------------PTTAWAGPDGKWR 269 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRD----------------P~V~w~~~dG~w~ 269 (573)
+||+... ..+.|++|.|+|+ ++|++. .+++.++.. .+||| |.| + ..+|+|+
T Consensus 134 ~yt~~~~-~~~~i~la~S~Dl-----~~W~~~--g~i~~~~~~---~~~~~~~~k~~~l~p~~~~g~p~v-~-k~~G~y~ 200 (356)
T 3taw_A 134 LYTQWNR-KVPRLAVATSKDL-----KHWTKF--GPAFEKAYN---GKFKDEATKSASLVTTLKGDKQVI-A-KVNGKYF 200 (356)
T ss_dssp EEEEECS-SCEEEEEEEESSS-----SSCEEE--EETTSSHHH---HTTTTSCCCCEEEEEEEETTEEEE-C-CBTTBEE
T ss_pred EEEEeCC-CCceEEEEECCCC-----CCceEe--eeEcCCccc---cccccccCCccEEeecccCCCceE-E-EECCEEE
Confidence 9999753 3578999999984 899997 355543211 23443 233 3 4789999
Q ss_pred EEEeeecCCeeEEEEEEeCCCCCcEEc
Q 008224 270 LTIGSKIGKTGISLVYQTTDFKTYELL 296 (573)
Q Consensus 270 MvvGs~~~~~G~illY~S~Dl~~W~~~ 296 (573)
|++|. +.|.+++|+|+.+|+..
T Consensus 201 m~~g~-----~~I~la~S~Dl~~W~~~ 222 (356)
T 3taw_A 201 MYWGE-----KNVYAATSDNLIDWDPL 222 (356)
T ss_dssp EEECS-----SSBEEEEESSSSSCEEC
T ss_pred EEeCC-----ceeeEEECCCcccCeec
Confidence 99972 45789999999999974
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.1e-18 Score=172.91 Aligned_cols=181 Identities=20% Similarity=0.185 Sum_probs=128.1
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC--------CCcEEeeeEEEcc
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD--------INGVWTGSATILP 199 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD--------~~Gv~SGSavv~~ 199 (573)
.+++||+ +++++|+||||+++ ..|+|++|+||+||+..+.||.+...++ ..++|+++++. .
T Consensus 22 ~~~~DP~-i~~~~g~yYl~~t~---------~~i~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~v~~-~ 90 (314)
T 3cu9_A 22 LWAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPDICF-Y 90 (314)
T ss_dssp CBCSSCE-EEEETTEEEEEESE---------ETSEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-E
T ss_pred cCcCCCE-EEEECCEEEEEECC---------CCeeEEECcCCCCccCCCcccCCcchhhhccCCCcccCceecCcEEE-E
Confidence 4689998 57889999999987 2589999999999999999998876554 47899999975 6
Q ss_pred CCeEEEEEcccCCC-CcceEEEEEecCCCCCCcc--eEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec
Q 008224 200 DGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLL--DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (573)
Q Consensus 200 dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~--~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~ 276 (573)
+|+++|+||+.... ..+.+++|++++. ||..- +|++. .+|+..+.. ...++|||.++ .+++|++||++|+..
T Consensus 91 ~g~yylyyt~~~~~~~~~~igva~s~~~-dP~gp~~~w~~~--~~~~~~~~~-~~~~~iDp~vf-~D~dG~~Yl~~g~~~ 165 (314)
T 3cu9_A 91 NGIYYLYYSVSTFGKNTSVIGLATNQTL-DPRDPDYEWKDM--GPVIHSTAS-DNYNAIDPNVV-FDQEGQPWLSFGSFW 165 (314)
T ss_dssp TTEEEEEEEECCTTCCCEEEEEEEESCS-CTTSTTCCCEEE--EEEEEECTT-SSSCCCSCEEE-ECTTSCEEEEECBST
T ss_pred CCEEEEEEEeccCCCCCceEEEEEeCCC-CCCCCCcCcccC--CeEecCCCC-CCCCccCCCeE-EcCCCCEEEEEeccC
Confidence 99999999987532 3567899999872 44322 49985 466654322 23468999995 457899999998742
Q ss_pred CCeeEEEEEE-eCCCCC----cEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 277 GKTGISLVYQ-TTDFKT----YELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 277 ~~~G~illY~-S~Dl~~----W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.| +.+.+ +.|... |+.. .+.....+..++|||.+|+.+ .+++|..|..
T Consensus 166 --~~-i~~~~l~~d~~~~~~~~~~~-~~~~~~~~~~~~EgP~i~k~~---------------G~yyL~~s~~ 218 (314)
T 3cu9_A 166 --SG-IQLIQLDTETMKPAAQAELL-TIASRGEEPNAIEAPFIVCRN---------------GYYYLFVSFD 218 (314)
T ss_dssp --TC-EEEEECCTTTCSCCTTCCCE-EEECCSSSSCCEEEEEEEEET---------------TEEEEEEEES
T ss_pred --Cc-EEEEEECcccCcccCCCceE-EecccCCCCCccCccEEEEEC---------------CEEEEEEEcC
Confidence 23 44555 344322 3211 111111234589999999985 2788888754
|
| >3p2n_A 3,6-anhydro-alpha-L-galactosidase; 5-bladed beta-propeller, glycoside hydrolase family GH117, agaro-oligosaccharides, CARB hydrolase; 1.95A {Zobellia galactanivorans} | Back alignment and structure |
|---|
Probab=99.72 E-value=5e-17 Score=174.14 Aligned_cols=174 Identities=16% Similarity=0.182 Sum_probs=130.4
Q ss_pred cccccccccceeeeecCC--Cc----ccCCcceeEECCEEEEEEeeCC--CCCC-CCCcEEEEEEecCccCeeecceec-
Q 008224 110 TNAMFTWQRTSFHFQPEK--NW----MNDPNGPLFYKGWYHLFYQYNP--DSAV-WGNITWGHAVSADLIHWLYLPIAM- 179 (573)
Q Consensus 110 ~~~~~~w~Rp~yHf~P~~--gW----mNDPNG~~y~~G~YHLFYQ~nP--~~~~-wG~~~WGHAvS~DLVhW~~lp~AL- 179 (573)
+..+..|++....|.|.. .| +-+|. +++++|+|||||+.+. .+.. .+.+.+++|+|+|++ |++++..|
T Consensus 144 S~Dlv~W~~~g~~l~~~~~~~wd~~gv~aPs-Vi~~dGkYyL~Yt~~~~~~~~~~~~~i~va~A~S~DG~-W~~~~~pli 221 (408)
T 3p2n_A 144 SEDGWTWKEEGPAVTRGEKGAYDDRSVFTVE-IMKWEDKYYLCYQTVKSPYNVRVKNQVGLAWADSPDGP-WTKSEEPIL 221 (408)
T ss_dssp ESSSSEEEEEEEEECCCSTTSTTSSEEEEEE-EEEETTEEEEEEEEECSSCCTTCCCEEEEEEESSTTCC-CEECSSCSB
T ss_pred cCCCCeeeEeCceeCCCCCCCcccCceEeeE-EEEECCEEEEEEEeecCCCCCcCCCceEEEEEECCCCC-EEECCccee
Confidence 455788999988888765 45 45676 7788999999999863 2222 346899999999999 99976444
Q ss_pred cCC------------------CCcCCCcEEeeeEEEccCCeEEEEEcccCCC-------CcceEEEEEecCCCCCCcceE
Q 008224 180 VPD------------------QWYDINGVWTGSATILPDGQIVMLYTGSTDK-------SVQVQNLAYPADPSDPLLLDW 234 (573)
Q Consensus 180 ~Pd------------------~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~-------~~q~q~lA~S~D~~Dp~L~~W 234 (573)
.|. ..||..+++.++++ ..+|+++|+|++.... ..+.|++|+|+|.. ..|
T Consensus 222 ~~~~~~~~~~e~d~~~~~~~~~~wd~~~v~~P~v~-~~~G~yyl~Ys~~~~g~~~~~~~~~~~igvA~Sdd~~----Gpw 296 (408)
T 3p2n_A 222 SPADNGVWKGEEQDRFAVIKKGDFDSHKVHDPCII-PYKGKFYLYYKGEQMGEAITFGGRQIRHGVAIADNPK----GPY 296 (408)
T ss_dssp CCCSCCEECSSSCCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECCEEEEEEESSTT----CCC
T ss_pred CCCCCceEEEecCCcccccccceecCCCeEcceEE-EECCEEEEEEEcccCccccccCCCccEEEEEEECCCC----CCc
Confidence 443 35777789888876 5799999999997531 24789999998852 479
Q ss_pred EEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccccc
Q 008224 235 VKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (573)
Q Consensus 235 ~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~ 302 (573)
+|.++|||+... .||+| |++.+|.|+|+. + +..|...+|+|+|+++|++.+.+...
T Consensus 297 ~k~~~nPVl~~~--------~dp~V-w~~~dG~y~mi~--~-~g~gh~~i~~S~Dg~~W~~~~~i~~~ 352 (408)
T 3p2n_A 297 VKSPYNPISNSG--------HEICV-WPYNGGIASLIT--T-DGPEKNTIQWAPDGINFEIKSVIPGV 352 (408)
T ss_dssp EECTTCCSCSSC--------SSCCE-EEETTEEEEEEC--S-SSTTCSEEEEESSSSCCEEEEECSCC
T ss_pred EECCCCCcccCC--------CCCee-EecCCCEEEEEE--E-CCCCcEEEEECCCCCEEEEEeecccC
Confidence 999889998532 38999 876778777773 2 23344446899999999999887643
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=6.8e-15 Score=161.60 Aligned_cols=178 Identities=16% Similarity=0.170 Sum_probs=125.9
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC------CCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD------INGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD------~~Gv~SGSavv~~dG 201 (573)
||++||+ +++++|.||||++..+. ...|.+++|+||+||+..+.||.+...++ ..|+|.++++. .+|
T Consensus 12 g~~~DP~-i~~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~wAP~i~~-~~g 84 (528)
T 1yrz_A 12 GFHPDPS-IVRVGDDYYIATSTFEW-----FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLSY-HDG 84 (528)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCe-EEEECCEEEEEEccCcc-----CCCeEEEECCCccCceECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 6899999 78899999999986532 23589999999999999999987765333 46899999975 799
Q ss_pred eEEEEEcccCC-C---CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE---Eee
Q 008224 202 QIVMLYTGSTD-K---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT---IGS 274 (573)
Q Consensus 202 ~~~~~YTG~~~-~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv---vGs 274 (573)
+++|+||+... . ..+.+++|+++|.. ..|++ |+.. ....+||.+++ ++||++||+ .|+
T Consensus 85 ~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~------~~~~iDp~vf~-D~dG~~Yl~~~~~~~ 149 (528)
T 1yrz_A 85 TFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWSD----PIYL------NSSGFDPSLFH-DDDGRKWLVNMIWDY 149 (528)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCCC----CEEC------CCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEecccCCCCCcccceEEEEEeCCCC----CCccc----cEEC------CCCcCCCceEE-CCCCCEEEEEeeccC
Confidence 99999997532 1 23558899998753 35764 4432 13679999955 578999999 555
Q ss_pred ecC--CeeEEEEEE-eCCCCCcEEcccc--cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 275 KIG--KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 275 ~~~--~~G~illY~-S~Dl~~W~~~~~l--~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
+.. ..+.+.+++ +.|. ++..++. +....+..++|||.+|+.+ .+++|..|...
T Consensus 150 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~---------------G~YYL~~s~~g 207 (528)
T 1yrz_A 150 RKGNHPFAGIILQEYSEAE--QKLVGPVKNIYKGTDIQLTEGPHLYKKD---------------GYYYLLVAEGG 207 (528)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred CCCCCCCCeEEEEEECCcc--CCCCCCCEEEEcCCCCCccCCCEEEEEC---------------CEEEEEEeCCC
Confidence 432 234566776 5664 4444332 1121233589999999985 26777777543
|
| >3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=3.3e-15 Score=157.26 Aligned_cols=122 Identities=19% Similarity=0.267 Sum_probs=98.0
Q ss_pred eeecc---eeccCCC------------CcCCCcEEeeeEEEccCCeEEEEEcccCCC------CcceEEEEEecCCCCCC
Q 008224 172 WLYLP---IAMVPDQ------------WYDINGVWTGSATILPDGQIVMLYTGSTDK------SVQVQNLAYPADPSDPL 230 (573)
Q Consensus 172 W~~lp---~AL~Pd~------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~------~~q~q~lA~S~D~~Dp~ 230 (573)
|++.+ +.|.|.. .||.+|||+|||+. .||+++|||||+... +.+.|++|+|+|+
T Consensus 17 f~R~~~~nPIl~p~~~~~~~~~~~~~~~~D~~gv~sgsai~-~dG~y~lfYtg~~~~~~~~~~~~~~ig~A~S~Dg---- 91 (356)
T 3taw_A 17 FERPTGVNPVIKPLPTKFYCPMREDSVAWEESDTFNPAATI-YDGKIVVMYRAEDNSAQGIGSRTSRLGYATSTDG---- 91 (356)
T ss_dssp CBCCTTTCCSBCCCCCEEEETTTTEEEETTSSEEEEEEEEE-ETTEEEEEEEEECSSSCSTTSSCEEECCEEESSS----
T ss_pred eeeCCCCCCeEccCCccccCcccccCCccccCCeECcEEEE-ECCEEEEEEEEEcCCCccCCCceeEEEEEEeCCC----
Confidence 55443 4788875 68999999999976 799999999998643 4688999999985
Q ss_pred cceEEEeCCCceecCCCCCC-----CCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccc
Q 008224 231 LLDWVKYPGNPVLVPPRHIG-----PKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 231 L~~W~K~~~nPVl~~p~g~~-----~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~ 301 (573)
++|+|.+ +|||.+.+... ..++|||+| |+.++|+|+|+.++..+..+.+.+|+|+||.+|++.+.++.
T Consensus 92 -i~w~~~~-~pvl~p~~~~~~~~~~~~~~~DP~v-~~~~dg~y~m~yt~~~~~~~~i~la~S~Dl~~W~~~g~i~~ 164 (356)
T 3taw_A 92 -IHFERDT-KPAFYPAKDNQAENECPGGTEDPRI-AMTEDGTYVLLYTQWNRKVPRLAVATSKDLKHWTKFGPAFE 164 (356)
T ss_dssp -SSCEECS-SCSBCCCSSTTHHHHTTTEEEEEEE-EECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETTS
T ss_pred -ccceECC-cceecCCCccccccccCCceECCEE-EEECCCEEEEEEEEeCCCCceEEEEECCCCCCceEeeeEcC
Confidence 7999975 79997654422 368999999 44458899999887655667889999999999999988764
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-13 Score=149.98 Aligned_cols=176 Identities=16% Similarity=0.174 Sum_probs=124.0
Q ss_pred cccCCcceeEECCEEEEEEeeCCC-----C-----CCCCCcEEEEEEecCccCeeecceeccCCC----------CcCCC
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPD-----S-----AVWGNITWGHAVSADLIHWLYLPIAMVPDQ----------WYDIN 188 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~-----~-----~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~----------~yD~~ 188 (573)
++.||. +++++|+|+||+.+... + .......|.+++|+||+||+.++.++.+.. .| ..
T Consensus 21 ~~~DP~-i~~~~g~yYly~t~~~~~~~~~g~~~~~~~~~~~~i~i~~S~DLv~W~~~g~v~~~~~~~~~~g~~~~~w-~~ 98 (487)
T 3c7f_A 21 LGADPV-ALTYNGRVYIYMSSDDYEYNSNGTIKDNSFANLNRVFVISSADMVNWTDHGAIPVAGANGANGGRGIAKW-AG 98 (487)
T ss_dssp CCEEEE-EEEETTEEEEEEECCCCEECTTSCEECCCSTTCCSEEEEEESSSSSEEEEEEECCBCSTTGGGGTCSBTT-CS
T ss_pred cCCCCC-eEEECCEEEEEEcCCcccccccccccccccccccceEEEECCCCcCcEEccccccCCcccccccccccCc-cc
Confidence 678998 67789999999998642 1 112346789999999999999998887652 22 24
Q ss_pred cEEeeeEEEc-cC--CeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCC-CCCC-CCCCCCCeeEeec
Q 008224 189 GVWTGSATIL-PD--GQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHIG-PKDFRDPTTAWAG 263 (573)
Q Consensus 189 Gv~SGSavv~-~d--G~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-~g~~-~~~fRDP~V~w~~ 263 (573)
++|.++++.. .| |+++|+||.. .+.+++|+|+|+. -.|++..+.|++... ++.. ....+||.+++ +
T Consensus 99 ~~WAP~v~~~~~~g~g~yylyyt~~----~~~i~va~s~~p~----Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~-D 169 (487)
T 3c7f_A 99 ASWAPSIAVKKINGKDKFFLYFANS----GGGIGVLTADSPI----GPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFV-D 169 (487)
T ss_dssp CCEEEEEEEEEETTEEEEEEEEEST----TBCEEEEEESSTT----CCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEE-C
T ss_pred cCcchheEEEecCCCCeEEEEEEcC----CcEEEEEEeCCCC----CCcccCCCCeEeecCCCCccCCCCccCCceEE-c
Confidence 7999999753 24 6999999975 2568999998763 458875457877532 2321 24679999965 5
Q ss_pred CCCcEEEEEeeecCC-----------eeEEEEE-EeCCCCCcEEcccccccCCCCCceeeecEEEec
Q 008224 264 PDGKWRLTIGSKIGK-----------TGISLVY-QTTDFKTYELLDEYLHAVPGTGMWECVDFYPVA 318 (573)
Q Consensus 264 ~dG~w~MvvGs~~~~-----------~G~illY-~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~ 318 (573)
+||++||+.|+.... ...+.+. -++|+..|+.....+. ...+.|+|.+++.+
T Consensus 170 ddG~~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~~~g~~~~i~---~p~~~Egp~i~k~~ 233 (487)
T 3c7f_A 170 DDGTGYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPDMTSVVGSASTID---APFMFEDSGLHKYN 233 (487)
T ss_dssp TTSCEEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTTSSSEEEEEEEEC---CTTEEEEEEEEEET
T ss_pred CCCCEEEEECCcccCccccccccccCCCceEEEEECCCeeeccCccEEec---CCceEecceEEEEC
Confidence 789999999874210 1123333 4789999986543332 22489999999885
|
| >3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.5e-14 Score=151.14 Aligned_cols=125 Identities=16% Similarity=0.194 Sum_probs=99.7
Q ss_pred ccCeeecceeccCCC-------------CcCCCcEEeeeEEEccCCeEEEEEcccCCC------CcceEEEEEecCCCCC
Q 008224 169 LIHWLYLPIAMVPDQ-------------WYDINGVWTGSATILPDGQIVMLYTGSTDK------SVQVQNLAYPADPSDP 229 (573)
Q Consensus 169 LVhW~~lp~AL~Pd~-------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~------~~q~q~lA~S~D~~Dp 229 (573)
+++|....++|.|+. .||.+|||+|+|+. .||+++||||+.... +.+.|++|+|+|+
T Consensus 19 f~r~~~~~Pil~p~~~~~~~~~~~~~~~~wD~~gvfnp~ai~-~dGky~LfY~~~~~~~~~~~~~~~~ig~A~S~DG--- 94 (364)
T 3qc2_A 19 FERPKNVNPVISPIENTKFYCPLTKDSIAWESNDTFNPAATL-YNGEIVVLYRAEDKSGVGIGHRTSRLGYATSTDG--- 94 (364)
T ss_dssp CBCCTTTCCSBCCCSSCCEEETTTTEEECTTSSEEEEEEEEE-ETTEEEEEEEEECSSSSSTTCSCEEEEEEEESSS---
T ss_pred ceeCCCCCCeEecCCcccccccccccccccccCceECceEEE-ECCEEEEEEEEECCCCcccCCCceEEEEEEeCCC---
Confidence 444444356899886 78999999999975 799999999997643 4688999999985
Q ss_pred CcceEEEeCCCceecCCCCCCC-----CCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccc
Q 008224 230 LLLDWVKYPGNPVLVPPRHIGP-----KDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 230 ~L~~W~K~~~nPVl~~p~g~~~-----~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~ 301 (573)
++|++. .+|||.+...... .++|||+| +..++|+|+|++++.....+.+.+++|+||++|++.+.++.
T Consensus 95 --i~w~~~-~~Pvl~P~~~~~~~~e~~~gv~DP~v-~~~edG~yym~Yta~~~~~~~i~lA~S~Dl~~W~k~g~i~~ 167 (364)
T 3qc2_A 95 --THFQRE-KTPVFYPDNDSQKELEWPGGCEDPRI-AVTDDGLYVMMYTQWNRHVPRLAVATSRNLKDWTKHGPAFA 167 (364)
T ss_dssp --SSCEEC-SSCSBCCCSSTTHHHHTTTEEEEEEE-EECTTSCEEEEEEEECSSCEEEEEEEESSSSSCEEEEETTS
T ss_pred --ceeeEc-CcCeEcCCCccccccccCCcEECCEE-EEeCCCEEEEEEEecCCCCeEEEEEEECCCCEEEEeeeccC
Confidence 799996 4799876544321 57899999 54468999999998755567888999999999999988763
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.1e-13 Score=148.63 Aligned_cols=179 Identities=16% Similarity=0.128 Sum_probs=123.8
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccC
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPD 200 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~d 200 (573)
.|++.||+ +++++|.||||++..+. ...|.+++|+||+||+..+.+|.+...+ +..|+|.++++. .+
T Consensus 9 ~g~~~DP~-ii~~~~~yY~~~s~~~~-----~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~ 81 (533)
T 1yif_A 9 KGFNPDPS-ICRAGEDYYIAVSTFEW-----FPGVQIHHSKDLVNWHLVAHPLQRVSQLDMKGNPNSGGVWAPCLSY-SD 81 (533)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBTE-----ESBCEEEEESSSSSEEEEECSBCSTTTCCCTTCCTTCBBCSCEEEE-ET
T ss_pred CCCCCCCe-EEEECCEEEEEEecCCC-----CCCeEEEEeCCCCCCeECCccccCcccccccCCCCCCCEECceEEE-EC
Confidence 37889998 68889999999986532 1258999999999999999888765422 247899999975 79
Q ss_pred CeEEEEEcccCC-C---CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec
Q 008224 201 GQIVMLYTGSTD-K---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (573)
Q Consensus 201 G~~~~~YTG~~~-~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~ 276 (573)
|+++|+||+... . ..+.+++|+++|.. ..|++ |+... ...+||.+++ +++|++||+.+...
T Consensus 82 g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-D~dG~~Yl~~~~~~ 146 (533)
T 1yif_A 82 GKFWLIYTDVKVVDGAWKDCHNYLVTCETIN----GDWSE----PIKLN------SSGFDASLFH-DTDGKKYLLNMLWD 146 (533)
T ss_dssp TEEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEeccCCCCCcccccEEEEEeCCCC----CCccc----cEEcC------CCcCCCceEE-CCCCCEEEEEEecc
Confidence 999999997543 1 13567899998753 35764 44332 2468999965 57899999988431
Q ss_pred C-----CeeEEEEEE-eCCCCCcEEcccc--cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 277 G-----KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 277 ~-----~~G~illY~-S~Dl~~W~~~~~l--~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
. ..+.+.+++ +.|+. +..++. +....+.+++|||.+|+.+ .+++|..|...
T Consensus 147 ~~~g~~~~~~i~~~~l~~d~~--~~~g~~~~i~~~~~~~~~EgP~i~k~~---------------G~YYL~~s~gg 205 (533)
T 1yif_A 147 HRIDRHSFGGIVIQEYSDKEQ--KLIGKPKVIFEGTDRKLTEAPHLYHIG---------------NYYYLLTAEGG 205 (533)
T ss_dssp CCTTSCSEEEEEEEEEETTTT--EECSCCEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred cccCCCCCCCEEEEEECCccC--CCCCCcEEEEcCCCCCccccceEEEEC---------------CEEEEEEeCCC
Confidence 1 123455565 56653 333322 1111233589999999985 26777777543
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.9e-13 Score=147.20 Aligned_cols=178 Identities=16% Similarity=0.124 Sum_probs=124.8
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc------CCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY------DINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~dG 201 (573)
||+.||+ +++++|.||||++... | ...|.++.|+||+||+..+.+|.+...+ +..|+|.++++. .||
T Consensus 11 g~~~DP~-i~~~~~~yY~~~s~~~----~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 83 (535)
T 2exh_A 11 GFHPDPS-ICRVGDDYYIAVSTFE----W-FPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLSY-SDG 83 (535)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEECCCC----C-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 7899998 6888999999988543 1 2358899999999999999988765422 357899999975 799
Q ss_pred eEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC
Q 008224 202 QIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (573)
Q Consensus 202 ~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~ 277 (573)
+++|+||+.... ..+.+++|+++|.. ..|++ |+... ...+||.+++ ++||++||+.+....
T Consensus 84 ~~ylyyt~~~~~~g~~~~~~~~va~s~~~~----Gpw~~----p~~~~------~~~iDp~vf~-DddG~~Yl~~~~~~~ 148 (535)
T 2exh_A 84 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWDH 148 (535)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeccCCCCCccccceEEEEeCCCC----CCccc----cEecC------CCcCCCceEE-CCCCCEEEEEEecCC
Confidence 999999975431 23567899998753 35765 44321 2569999965 578999999885321
Q ss_pred -----CeeEEEEEE-eCCCCCcEEcccc--cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 278 -----KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 278 -----~~G~illY~-S~Dl~~W~~~~~l--~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
..+.+.+++ +.|+ |+..++. +......+++|||.+|+.+ .+++|..|...
T Consensus 149 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~---------------G~YYL~~s~gg 206 (535)
T 2exh_A 149 RVDHHPFYGIVLQEYSVEQ--KKLVGEPKIIFKGTDLRITEGPHLYKIN---------------GYYYLLTAEGG 206 (535)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred ccCCCCCCcEEEEEECCcc--CCCCCCcEEEEcCCCCCccccceEEEEC---------------CEEEEEEeCCC
Confidence 123455666 5665 5554432 1121233589999999985 26777777543
|
| >3r4z_A Glycosyl hydrolase family 32, N terminal; AGAR metabolism, neoagarobiose, 3,6-anhydro-L-galactose, ALP galactopyranose, bioenergy; HET: GLA; 1.55A {Saccharophagus degradans} PDB: 3r4y_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.9e-13 Score=140.92 Aligned_cols=173 Identities=16% Similarity=0.160 Sum_probs=119.8
Q ss_pred cccccccceeeeecCC--Ccc----cCCcceeEECCEEEEEEeeCCCCC-CCCCcEEEEEEecCc-cCeeecc-eeccCC
Q 008224 112 AMFTWQRTSFHFQPEK--NWM----NDPNGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSADL-IHWLYLP-IAMVPD 182 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~--gWm----NDPNG~~y~~G~YHLFYQ~nP~~~-~wG~~~WGHAvS~DL-VhW~~lp-~AL~Pd 182 (573)
.+..|++...-|.|.. .|- -.|. +++++|+|+|||..+.... .......|+|+|+|+ .+|+..+ +.|.+.
T Consensus 101 DLv~W~~~g~~l~~~~~~~~d~~gvwaPs-vi~~dGkyyL~Yt~~~~~~~~~~~~~igvA~Sdd~~Gpw~~~~~Pvi~~~ 179 (374)
T 3r4z_A 101 DKITWKEIGPAIQRGAAGAYDDRAVFTPE-VLRHNGTYYLVYQTVKAPYLNRSLEHIAIAYSDSPFGPWTKSDAPILSPE 179 (374)
T ss_dssp SSSEEEEEEEEECCCCTTSTTSSEEEEEE-EEEETTEEEEEEEEECSSCCTTCCBEEEEEEESSTTCCCEECSSCSBCCC
T ss_pred CCcCcEeCcccCCCCCCCCccCCCEECCE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEECCCCCCeEECCCCEeCCC
Confidence 4667887766666643 342 3355 5778999999999764322 123478999999997 6899865 334332
Q ss_pred ------------------CCcCCCcEEeeeEEEccCCeEEEEEcccCCCC-------cceEEEEEecCCCCCCcceEEEe
Q 008224 183 ------------------QWYDINGVWTGSATILPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 183 ------------------~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
..|+..+++.++++ ..+|+++|+|++..... .+.|++|++++.. ..|+|.
T Consensus 180 ~~~~w~~ddd~~~~~~~~~~~d~~~~~~P~v~-~~~g~yyl~Y~~~~~~~~~~~~~~~~~igvA~sds~~----Gpw~~~ 254 (374)
T 3r4z_A 180 NDGVWDTDEDNRFLVKEKGSFDSHKVHDPCLM-FFNNRFYLYYKGETMGESMNMGGREIKHGVAIADSPL----GPYTKS 254 (374)
T ss_dssp CCSEECSSSSCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECEEEEEEEESSTT----CCCEEC
T ss_pred cCCceeecCCceEEEecCCccccCccccceEE-EECCEEEEEEEecCCCCccccCCCcceEEEEEECCCC----CCCEEC
Confidence 12355668888875 57999999999975321 3579999998753 469999
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccccc
Q 008224 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHA 302 (573)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~ 302 (573)
+.|||+.. .+||+| |... +.|+++++....+.+ .++.|+|+++|++.+.+...
T Consensus 255 ~~~Pi~~~--------~~dp~V-~~~~-~g~~~mv~~~g~~~~--~l~~S~Dg~~W~~~~~i~~~ 307 (374)
T 3r4z_A 255 EYNPITNS--------GHEVAV-WPYK-GGMATMLTTDGPEKN--TCQWAEDGINFDIMSHIKGA 307 (374)
T ss_dssp TTCCCCSS--------CSSCCE-EEET-TEEEEEECSSSTTCS--EEEEETTSSSCEEEEECSCC
T ss_pred CCCCEeCC--------CCCCce-EEeC-CEEEEEEEecCCCce--EEEECCCcCCeEEcceeccC
Confidence 88999852 259999 7644 556555553333334 45669999999999888654
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.3e-13 Score=142.82 Aligned_cols=176 Identities=18% Similarity=0.110 Sum_probs=127.0
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--cC-CCcEEeeeEEEc-cCCeEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--YD-INGVWTGSATIL-PDGQIVML 206 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~--yD-~~Gv~SGSavv~-~dG~~~~~ 206 (573)
-||. +++++|+||||.++.+.+.. ....|.+++|+||+||+.++.+|.+... +. ..++|..+++.. .||+++|+
T Consensus 25 HDPs-Ii~~~g~YYly~T~~~~~~~-~~~gi~v~sS~DLvnW~~~G~aL~~~~~~~~~~~~~~WAP~V~y~~~dGkYYLy 102 (441)
T 3nqh_A 25 HGAC-IVEENGRYYLFGEYKSDKSN-AFPGFSCYSSDDLVNWKFERVVLPMQSSGILGPDRVGERVKVMKCPSTGEYVMY 102 (441)
T ss_dssp EEEE-EEEETTEEEEEEECCCSSCS-SCCCEEEEEESSSSSCEEEEEEECCCSSSTTSTTEEEEEEEEEECTTTCCEEEE
T ss_pred cCCE-EEEECCEEEEEEEcCCccCC-CCCCeeEEECCCCCCcEECceeeccCCccccCCCCccCCceeEEEccCCEEEEE
Confidence 4884 89999999999998775433 3467999999999999999999977542 32 235899998753 59999999
Q ss_pred EcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEE
Q 008224 207 YTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVY 285 (573)
Q Consensus 207 YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY 285 (573)
||..... ..+.+++|+++++. ..|+.. .||+.... ....+||.+++ ++||++||+.|+. . ++
T Consensus 103 yt~~~~~~~~~~igVAtSdsP~----GPwt~~--gpl~~~g~---~~~~IDPsvF~-DdDGk~YL~~g~~-----~--I~ 165 (441)
T 3nqh_A 103 MHADDMNYKDPHIGYATCSTIA----GEYKLH--GPLLYEGK---PIRRWDMGTYQ-DTDGTGYLLLHGG-----I--VY 165 (441)
T ss_dssp EEEEETTSCSCEEEEEEESSTT----SCCEEE--EECEETTE---ECCCCSEEEEE-CTTSCEEEEEGGG-----E--EE
T ss_pred EEeCCCCCCcceEEEEEeCCCC----CCceEc--ceeecCCC---cccccCceEEE-eCCCCEEEEeCCC-----c--EE
Confidence 9987532 34678999998753 468763 47764311 12568999955 5799999999852 2 24
Q ss_pred E-eCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 286 Q-TTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 286 ~-S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
+ ++|+.++.-....+ ......|||.+|+.+ .+++|..|..
T Consensus 166 eLs~D~~~~~g~~~~i---~~g~~~EgP~i~K~~---------------G~YYL~~S~~ 206 (441)
T 3nqh_A 166 RLSKDYRTAEEKVVSG---VGGSHGESPAMFKKD---------------GTYFFLFSNL 206 (441)
T ss_dssp EECTTSSSEEEEEESC---STTCCCEEEEEEEET---------------TEEEEEEECS
T ss_pred EeCCccccccCceEEe---CCCCceECcEEEEEC---------------CEEEEEEeCC
Confidence 4 78998886432222 122468999999985 2788888763
|
| >1vkd_A Conserved hypothetical protein TM1225; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.10A {Thermotoga maritima} SCOP: b.67.2.4 | Back alignment and structure |
|---|
Probab=99.48 E-value=6.5e-14 Score=146.09 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=101.1
Q ss_pred cCccCeeecceeccCCC-CcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecC
Q 008224 167 ADLIHWLYLPIAMVPDQ-WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP 245 (573)
Q Consensus 167 ~DLVhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~ 245 (573)
..+++|+..| +|.|+. +| ..|||+++++. .||+++|||++....+.+.|++|+|+|+ .+|++.+ +|||.+
T Consensus 34 ~~~~r~~~~P-iL~p~~~~~-~~gv~n~~~i~-~~g~~~lfY~~~~~~~~~~~~~A~S~Dg-----i~w~~~~-~pvl~p 104 (338)
T 1vkd_A 34 GPVWRYSKNP-IIGRNPVPK-GARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQWV 104 (338)
T ss_dssp SSEEECTTCC-SBCBSCSTT-EEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCEE
T ss_pred CceEECCCCc-eECCCCCcc-cCeEEccEEEE-ECCEEEEEEEEECCCCcEEEEEEEeCCC-----CccEECC-CCEEeC
Confidence 3588999888 788985 77 79999999975 6999999999987666789999999985 7999974 788876
Q ss_pred C--CCCCCCCCC-CCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccc
Q 008224 246 P--RHIGPKDFR-DPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300 (573)
Q Consensus 246 p--~g~~~~~fR-DP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~ 300 (573)
. ...+..++| ||+| ++ .+|+|||++++ ....+.+.+|+|+|+.+|++.+.+.
T Consensus 105 ~~~~~~~~~g~~yDP~v-~~-~~d~yym~yt~-~~~~~~i~la~S~Dl~~W~~~~~i~ 159 (338)
T 1vkd_A 105 DVNGEPFQPSYAYDPRV-VK-IEDTYYITFCT-DDHGPTIGVGMTKDFKTFVRLPNAY 159 (338)
T ss_dssp CTTSCBCCCSSEEEEEE-EE-ETTEEEEEEEE-ESSSEEEEEEEESSSSSEEEECCSS
T ss_pred CCCCccccCCEEeCcEE-EE-ECCEEEEEEEE-cCCcceEEEEEECCCCeEEECCccC
Confidence 4 334567899 9999 54 46899999998 5556788999999999999988764
|
| >4ak5_A Anhydro-alpha-L-galactosidase; hydrolase, marine glycoside hydrolase, marine polysaccharide degradation, marine cazymes, AGAR metabolism; 1.70A {Bacteroides plebeius} PDB: 4ak7_A* 4ak6_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=138.61 Aligned_cols=178 Identities=19% Similarity=0.230 Sum_probs=122.8
Q ss_pred cccccccceeeeecC--CCc----ccCCcceeEECCEEEEEEeeCCCCC-CCCCcEEEEEEecC-ccCeeecce-eccCC
Q 008224 112 AMFTWQRTSFHFQPE--KNW----MNDPNGPLFYKGWYHLFYQYNPDSA-VWGNITWGHAVSAD-LIHWLYLPI-AMVPD 182 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~--~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~-~wG~~~WGHAvS~D-LVhW~~lp~-AL~Pd 182 (573)
.+..|++..-=+.|. ..| +-+|. +++++|+|+|||.-+.... ..+....|.|+|+| .-.|+..+. .|.|.
T Consensus 141 Dlv~W~~~g~~L~~~~~~~wd~~gv~aP~-Vi~~~Gkyym~Yt~~~~~~~~~~~~~IgvA~Sdsp~Gpwt~~~~Pvl~~~ 219 (404)
T 4ak5_A 141 DGLTWKEQGIAVKRGEKGAYDDRSVFTPE-VMEWKGKYYLCYQAVKSPYTVRVKNTIGMACADSPEGLWTKTDKPVLEPS 219 (404)
T ss_dssp SSSEEEEEEEEECCCSTTSTTSSEEEEEE-EEEETTEEEEEEEEECSCCCTTCCCEEEEEEESSTTCCCEECSSCSBCCC
T ss_pred CCCCceeCceEeecCCCCccccCCEEeeE-EEEECCEEEEEEEeccCCCCCCCcceEEEEEEeCCCCCceECCCceecCC
Confidence 466787766555553 234 34565 6788999999998654321 12356789999986 348998753 44443
Q ss_pred ------------------CCcCCCcEEeeeEEEccCCeEEEEEcccCCCC-------cceEEEEEecCCCCCCcceEEEe
Q 008224 183 ------------------QWYDINGVWTGSATILPDGQIVMLYTGSTDKS-------VQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 183 ------------------~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
..||..+++.++++ ..+|+++|||+|..... .+.|++|+|+|+ +..|+|.
T Consensus 220 ~~~~W~~ddd~~~~~~~~~~wD~~~~~~P~v~-~~~g~yyl~Ysg~~~~~~~~~~~~~~~igvA~Sdd~----~Gpw~k~ 294 (404)
T 4ak5_A 220 DTGEWEGDEDNRFKVVSKGDFDSHKVHDPCII-PYNGKFYMYYKGERMGEEITWGGREIKHGVAIAENP----MGPYVKS 294 (404)
T ss_dssp SCCEECSSSSCTTCEEECCSTTSSEEEEEEEE-EETTEEEEEEEEECTTCCEETTEECCEEEEEEESST----TCCCEEC
T ss_pred CCcceeeccCceeeeccCCcccCCcEECCEEE-EECCEEEEEEECCCCCCccccCCCcceEEEEEECCC----CCCcEEC
Confidence 23566788999975 57999999999985321 478999999885 2479999
Q ss_pred CCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCC
Q 008224 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTG 307 (573)
Q Consensus 238 ~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~G 307 (573)
+.|||+.. + .+++| |+..+|.|+|+... ..+.| ++|.|+|+++|++.+.+.+.....|
T Consensus 295 ~~nPv~~~--~------~e~~V-w~~~dg~~~ll~~~-g~~~g--~l~~S~Dg~~W~~~~~l~~~p~~~~ 352 (404)
T 4ak5_A 295 EYNPISNS--G------HEVCV-WPYKGGIASLITTD-GPEKN--TLQWSPDGINFEIMSVVKGAPHAIG 352 (404)
T ss_dssp TTCCSCSS--C------SSCCE-EEETTEEEEEECSS-STTCS--EEEEESSSSCCEEEEECSCCCSSCE
T ss_pred CCCceecC--C------CcceE-EEeCCcEEEEEEec-CCCce--EEEECCCCCeEEEeeeeccCccccC
Confidence 88999852 1 25677 87655555666432 23445 4667999999999998876443333
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=5.8e-11 Score=130.69 Aligned_cols=186 Identities=17% Similarity=0.100 Sum_probs=124.6
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC--CcCCCcEEeeeEEEc-cCCeEEEE
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ--WYDINGVWTGSATIL-PDGQIVML 206 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~-~dG~~~~~ 206 (573)
.-||. +++++|+||||+...... .....+..++|+||+||+..+.+|.+.. .++..++|.+.++.. .+|+++||
T Consensus 58 a~DP~-Ii~~~g~YY~~~T~~~~~--~~~~gi~v~~S~DLv~W~~~g~~l~~~~~~~~~~~~~WAP~v~~~~~~Gkyymy 134 (526)
T 3vsf_A 58 AHGGG-MLKHGDYYYWYGEYRDDS--NLFLGVSCYRSKDLVNWEYRGEVLSRNSAPELNHCNIERPKVMYNASTGEFVMW 134 (526)
T ss_dssp CEEEE-EEEETTEEEEEEEEECTT--SSEEEEEEEEESSSSSCEEEEEEEETTSSGGGSSCEEEEEEEEECTTTCCEEEE
T ss_pred ccCCe-EEEECCEEEEEEecCCCC--CCcCcEEEEECCCCCCcCCCCccCCCCCCcCcccCceECCEEEEECCCCEEEEE
Confidence 46996 888999999999875322 2235788999999999999999987654 355667999999764 38999999
Q ss_pred EcccC--CCCcceEEEEEecCCCCCCcceEEEeCC-CceecC---CCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee
Q 008224 207 YTGST--DKSVQVQNLAYPADPSDPLLLDWVKYPG-NPVLVP---PRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (573)
Q Consensus 207 YTG~~--~~~~q~q~lA~S~D~~Dp~L~~W~K~~~-nPVl~~---p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G 280 (573)
|+... ....+.+++|++++.. ..|+.... .|+... +.+......+||.+++ ++||++||++++..+ .+
T Consensus 135 ~~~~~~~~~~~~~igvats~~p~----Gpw~~~g~~~p~~~~g~~~~~~~~~~~iDp~vf~-D~dG~~Yl~~~~~~~-~~ 208 (526)
T 3vsf_A 135 MHWENGINYGQARAAVAYSKTPD----GKFTYIRSFRPMQDTGVMDHGLPGYMSRDCNVFV-DTDGKGYFISAANEN-MD 208 (526)
T ss_dssp EEEECSSCSCCCEEEEEEESSSS----SCCEEEEEECSSCTTCCEETTEESCCCCSEEEEE-CTTSCEEEEEEETTT-TE
T ss_pred EEeeCCCCCCcceEEEEEcCCCC----CCCEeccccccccccccccCCCCCcccccccEEE-CCCCCEEEEEEecCC-Cc
Confidence 99642 1234788999998863 35765321 343211 0111124569999955 579999999987432 23
Q ss_pred EEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeee
Q 008224 281 ISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL 342 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~ 342 (573)
+.+.--++|+..+.-....+. . ....|+|.+|+.+ .+++|..|.
T Consensus 209 i~i~~l~~d~~~~~~~~~~~~--~-g~~~EgP~i~k~~---------------G~YYL~~S~ 252 (526)
T 3vsf_A 209 LHLYELTPDYKNIASLKAKLF--V-GQQREAPCLIKRN---------------GYYYLITSG 252 (526)
T ss_dssp EEEEEECTTSSSEEEEEEEES--T-TSCCEEEEEEESS---------------SCEEEEEEC
T ss_pred eEEEEcCCCcccccCceEEeC--C-CCCcCCeEEEEEC---------------CEEEEEEcC
Confidence 333334577776654222111 1 2357999999874 267777773
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=6.9e-10 Score=122.24 Aligned_cols=178 Identities=17% Similarity=0.168 Sum_probs=119.9
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC------cCCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW------YDINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~------yD~~Gv~SGSavv~~dG 201 (573)
++..||. +++++|.|+||..... | ...+..+.|+||+||+..+.+|..... .+..++|.++++. .+|
T Consensus 10 ~~~~DP~-i~~~~~~yY~~~s~~~----~-~~gi~i~~S~DLv~W~~~g~~l~~~~~~~~~~~~~~~~~WAP~i~~-~~g 82 (538)
T 3c2u_A 10 GFNPDPS-IVRAGDDYYIATSTFE----W-FPGVQIHHSKDLVHWHLVAHPLSTTEFLDMKGNPDSGGIWAPDLSY-ADG 82 (538)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEccCC----C-CCCeEEEECCCCCCcEECccccCCcccccccCCCCCCCEECCeEEE-ECC
Confidence 6889998 7888999999875321 1 134688999999999999988865431 1356899999865 799
Q ss_pred eEEEEEcccCC-C---CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC
Q 008224 202 QIVMLYTGSTD-K---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (573)
Q Consensus 202 ~~~~~YTG~~~-~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~ 277 (573)
+++|+||.... . ..+.+++|+++|.. ..|++ |+... ...+||.+++ ++||++||+.+....
T Consensus 83 ~~yly~t~~~~~~g~~~~~~~~va~s~~p~----Gpw~~----p~~~~------~~~iDp~~f~-DddG~~Yl~~~~~~~ 147 (538)
T 3c2u_A 83 KFWLIYTDVKVVDGMWKDCHNYLTTAEDIK----GPWSK----PILLN------GAGFDASLFH-DPSGKKYLVNMYWDQ 147 (538)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----CCCCC----CEEEE------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeccCCCCCcccccEEEEEECCCC----CCccc----cEecC------CCcCCCeeEE-CCCCCEEEEEEecCC
Confidence 99999997542 1 13567899998753 34764 44321 1358999965 478999999874321
Q ss_pred -----CeeEEEEEE-eCCCCCcEEcccc--cccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 278 -----KTGISLVYQ-TTDFKTYELLDEY--LHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 278 -----~~G~illY~-S~Dl~~W~~~~~l--~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
..+.+.+.+ +.|. ++..++. +....+.+..|+|.+|+.+ .+++|..|...
T Consensus 148 ~~~~~~~~~i~~~~l~~d~--~~~~g~~~~i~~~~~~~~~EgP~i~k~~---------------G~YYL~~s~gg 205 (538)
T 3c2u_A 148 RVYHHNFYGIALQEYSVAE--EKLIGKPEIIYKGTDIAYTEGPHLYYIN---------------DMYYLMTAEGG 205 (538)
T ss_dssp CTTSCSEEEEEEEEEETTT--TEECSCCEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred ccCCCCCCCEEEEEECCcc--CCCCCCCEEEecCCCCCccccceEEEEC---------------CEEEEEEecCC
Confidence 123355555 4554 4554432 1111223478999999974 26777777643
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-08 Score=111.20 Aligned_cols=180 Identities=18% Similarity=0.181 Sum_probs=111.7
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC--------------c-CCCcEEeee
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW--------------Y-DINGVWTGS 194 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~--------------y-D~~Gv~SGS 194 (573)
.-||. +++++|+|+||..+- ..++|+||+||+..+.+|.+... | ...++|.++
T Consensus 36 ~~DPs-ii~~~g~YYl~~T~~-----------~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~l~~~~~w~~~~~~WAP~ 103 (470)
T 2x8s_A 36 VHDPS-IIETNGTFYVFGSHL-----------ASAKSNDLMQWQQLTTSVSNDNPLIPNVYEELKETFEWAQSDTLWAAD 103 (470)
T ss_dssp CSSCE-EEEETTEEEEECSTT-----------CEEEESSSSBCEEEECSCSTTCTTSTTHHHHTHHHHHHHTCSSCCCCE
T ss_pred CCCCE-EEEECCEEEEEECcC-----------ceEECCCcccceeccccccccccccccccccccccccccCCCceECCe
Confidence 56997 788899999985421 35899999999999877754211 1 236899999
Q ss_pred EEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCC-----CC--C---CCCCCCCCeeEeec
Q 008224 195 ATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-----RH--I---GPKDFRDPTTAWAG 263 (573)
Q Consensus 195 avv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-----~g--~---~~~~fRDP~V~w~~ 263 (573)
++...||+++|+|+..... ..+.+++|+|+|+. -.|+.. +.++.... .+ + .....+||.+++ +
T Consensus 104 vi~~~dGkyylyys~~~~~~~~~~IgvatSddp~----GPw~~~-g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~vf~-D 177 (470)
T 2x8s_A 104 VTQLADGKYYMYYNACRGDSPRSAMGVAVADNIE----GPYKNK-GIFLKSGMEGTSSDGTPYDATKHPNVVAPHTFF-D 177 (470)
T ss_dssp EEECTTSCEEEEEEEECSSSCCEEEEEEEESSTT----CCCEEE-EEEEEECCSSBCTTSSBCCTTTSCCSCCCEEEE-C
T ss_pred EEEecCCEEEEEEEeccCCCCccEEEEEEeCCCC----CCceeC-CeeeccCcccccccccccccccCCCCCCCCEEE-c
Confidence 8754689999999986432 34568899998763 368875 23443310 01 1 123578999965 5
Q ss_pred CCCcEEEEEeeecCCeeEEEEEEe-CCCC---CcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEE
Q 008224 264 PDGKWRLTIGSKIGKTGISLVYQT-TDFK---TYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLK 339 (573)
Q Consensus 264 ~dG~w~MvvGs~~~~~G~illY~S-~Dl~---~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~ 339 (573)
+||++||+.|+.. .| +.+.+- .|.. .++..+..+.. ......|.|-+|.-.. +.+++|.
T Consensus 178 dDG~~Yl~~g~~~--~g-I~~~eL~~d~~~~~~~~~~~~~i~~-g~~~~~EGP~i~~~K~-------------~G~YYL~ 240 (470)
T 2x8s_A 178 KDGKLWMVYGSYS--GG-IFILEMNPKTGFPLPGQGYGKKLLG-GNHSRIEGPYVLYNPD-------------TQYYYLY 240 (470)
T ss_dssp TTSCEEEEECBST--TC-EEEEEBCTTTSSBCTTCTTCEEEEC-CSSCSEEEEEEEEETT-------------TTEEEEE
T ss_pred CCCCEEEEeeecC--Cc-EEEEEECCccCcCcCCcccceEecC-CCCCceeccEEEEEcc-------------CCEEEEE
Confidence 7899999998642 23 334443 3321 11100000110 1123689999985321 1378888
Q ss_pred eeeCC
Q 008224 340 ASLDD 344 (573)
Q Consensus 340 ~S~~~ 344 (573)
.|...
T Consensus 241 ~S~g~ 245 (470)
T 2x8s_A 241 LSYGG 245 (470)
T ss_dssp EEESB
T ss_pred EEeCC
Confidence 87643
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=8.7e-07 Score=98.09 Aligned_cols=163 Identities=11% Similarity=0.062 Sum_probs=103.1
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC------------cCCCcEEeee
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW------------YDINGVWTGS 194 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~------------yD~~Gv~SGS 194 (573)
.|+.-||. ++..+|.|+||-.... + .-.+--..|+||+||+..+.+|....+ ....|+|..+
T Consensus 14 ~g~~~DP~-iir~~~~YY~~~st~~----~-~pg~~i~~S~DLvnW~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~WAP~ 87 (542)
T 3zxk_A 14 WEDHPALE-VFRVGSVFYYSSSTFA----Y-SPGAPVLKSYDLVHWTPVTHSVPRLNFGSNYDLPSGTPGAYVKGIWAST 87 (542)
T ss_dssp CSCCCSCE-EEEETTEEEEECCCBT----E-ESEEEEEEESSSSSCEEEEEEESSCCSCGGGGCCSSTTTTTTCSBCSCE
T ss_pred CCCCCCCe-EEEECCEEEEEEecCc----c-CCCeEEEEcCCCCCccccccccccCCccccccccCCcccccCCceECCc
Confidence 35678998 7888999999853210 1 123567889999999999988854221 1246899999
Q ss_pred EEEcc-CCeEEEEEcccCCCCcceEEEEEecCCCCCC-----cce---EEEeCCCceecCCCCCCCCCCCCCeeEeecCC
Q 008224 195 ATILP-DGQIVMLYTGSTDKSVQVQNLAYPADPSDPL-----LLD---WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 195 avv~~-dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~-----L~~---W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~d 265 (573)
+.... +|++||+|+.. ..+.+|+++++..|. |++ |++. +... ....||.+++ ++|
T Consensus 88 i~~~~~~G~fYly~~~~-----~~~~v~~a~~p~GPf~~g~~l~~~~~ws~~----~~~~------~~~iDp~~f~-DdD 151 (542)
T 3zxk_A 88 LRYRRSNDRFYWYGCVE-----GRTYLWTSPGGNALANNGEVPPSAWNWQHT----ATID------NCYYDAGLLI-DDD 151 (542)
T ss_dssp EEEETTTTEEEEEEEET-----TEEEEEEEECTTGGGTTTCCCGGGCCCEEE----EEES------SCCTTCEEEE-CTT
T ss_pred EEEECCCCEEEEEEECC-----CcEEEEEECCCCCCccccccccccCccccc----cccC------CCCCCCcEEE-cCC
Confidence 86532 59999999874 457889988764331 111 6652 1111 2346999966 578
Q ss_pred CcEEEEEeeecCCeeEEEEEE-eCCCCCcEEccc-ccccCCCCC-ceeeecEEEec
Q 008224 266 GKWRLTIGSKIGKTGISLVYQ-TTDFKTYELLDE-YLHAVPGTG-MWECVDFYPVA 318 (573)
Q Consensus 266 G~w~MvvGs~~~~~G~illY~-S~Dl~~W~~~~~-l~~~~~~~G-mWECPd~f~l~ 318 (573)
|+.||+.|. .+ +.+.+ +.|+..=.-... ++.. ..+ ..|-|-+|+.+
T Consensus 152 G~~Yl~~g~----~~-i~~~eL~~d~~~~~~~~~~i~~~--~~g~~~EgP~i~k~~ 200 (542)
T 3zxk_A 152 DTMYIAYGN----PT-INVAQLSPDGTRQVRVQQRVYAH--PQGQTVEGARMYKIR 200 (542)
T ss_dssp SCEEEEECS----SS-EEEEEECTTSSSEEEEEEEEECC--TTCCCCEEEEEEEET
T ss_pred CCEEEEEcC----CC-EEEEEeCCccCcccCCcEEEEeC--CCCccccccEEEEEC
Confidence 999999974 22 33333 455543221111 2221 123 67999999874
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=3.7e-07 Score=99.04 Aligned_cols=178 Identities=13% Similarity=0.084 Sum_probs=112.6
Q ss_pred cCCcceeE-ECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec--cCCC-CcCCCcEEeeeEEEccCCeEEEE
Q 008224 131 NDPNGPLF-YKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM--VPDQ-WYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 131 NDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL--~Pd~-~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
-||. +++ .+|+|+||+... . ...+..+.|+||+||+..+.++ .+.. .....++|...++. .||+++|+
T Consensus 20 ~DP~-iir~~dg~YY~~~T~~----~--~~~i~i~~S~DLv~W~~~~~~~~w~~~~~~~~~~~~WAP~v~~-~~Gkyyly 91 (468)
T 3akh_A 20 ADPH-IFKHTDGYYYFTATVP----E--YDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHF-IDGKWYVY 91 (468)
T ss_dssp EEEE-EEECTTSCEEEEEECT----T--CCEEEEEEESSTGGGGGCCCEEEEECCSSSTTCEEEEEEEEEE-ETTEEEEE
T ss_pred CCCE-EEEecCCEEEEEEEeC----C--CCCEEEEECCCccccccCCCcceecCCCCCCCCCCEecceEEE-ECCEEEEE
Confidence 8997 666 589999998752 1 2468899999999999876433 2321 22346899999864 69999999
Q ss_pred EcccCCCC--cceEEEEE--ecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec---CCe
Q 008224 207 YTGSTDKS--VQVQNLAY--PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI---GKT 279 (573)
Q Consensus 207 YTG~~~~~--~q~q~lA~--S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~---~~~ 279 (573)
|+.....+ ...+++|+ +.| |.-..|+... .++.+ .+ ..-.||.+++ .+|++||+.|+.. +..
T Consensus 92 ys~~~~~~~~~~~i~va~~~s~d---p~~Gpw~~~g--~~~~~-~~---~~~IDp~vf~--ddG~~Yl~~g~~~~~~~~~ 160 (468)
T 3akh_A 92 FAAGSTSDVWAIRMYVLESGAAN---PLTGSWTEKG--QIATP-VS---SFSLDATTFV--VNGVRHLAWAQRNPAEDNN 160 (468)
T ss_dssp EEEECSSCTTCCEEEEEEECCSC---TTTSCCEEEE--ECCCS-SC---SCEEEEEEEE--ETTEEEEEEEECCTTSSSS
T ss_pred EEeECCCCCCceeEEEEEccCCC---CCCCCCcccc--eeecC-CC---CCcCcCeEEE--ECCEEEEEEEccCCCCCCC
Confidence 99765322 34466776 444 3224788742 23322 11 2357999954 6899999998642 122
Q ss_pred eEEEEEEeCCCCCcEEccccc--ccC------CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 280 GISLVYQTTDFKTYELLDEYL--HAV------PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 280 G~illY~S~Dl~~W~~~~~l~--~~~------~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
+.+.+.+.+|. |+..+... ... .+...-|-|-+|+.+ .+++|..|..+
T Consensus 161 ~~i~i~~l~~~--~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~---------------G~YYL~ys~~g 216 (468)
T 3akh_A 161 TSLFIAKMANP--WTISGTPTEISQPTLSWETVGYKVNEGPAVIQHG---------------GKVFLTYSASA 216 (468)
T ss_dssp BEEEEEEEEET--TEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEET---------------TEEEEEEEESC
T ss_pred CcEEEEEeCCC--ceecCccEEecCCCcccccCCCccccCCEEEEEC---------------CEEEEEEEeCC
Confidence 34555666553 66554321 111 112367888888863 26777777654
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-06 Score=88.64 Aligned_cols=184 Identities=12% Similarity=0.066 Sum_probs=108.0
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeeccee--c-cCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA--M-VPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~A--L-~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
-||. ++.+++.|+||+...... -.+--..|+||+||++.... + .++......++|...++ ..||+++|+|
T Consensus 18 aDP~-ii~~~d~yY~~~st~~~~-----~g~~i~~S~DL~~w~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yylyy 90 (330)
T 3k1u_A 18 ADPM-IYKHNDGYYYFTASVPEY-----DRIEVRKAKTIEGLRNAEPVDVWRRHESGEMSNLIWAPEIH-FINGAWYIYF 90 (330)
T ss_dssp EEEE-EEECTTSCEEEEEECTTC-----CEEEEEEESSTGGGTTSCCEEEEECCSSSTTSEEEEEEEEE-EETTEEEEEE
T ss_pred CCCE-EEEECCEEEEEEeccCCC-----CCEEEEEcCCcCCccCCcceeecccCCCCccCCCeECCEEE-EECCeEEEEE
Confidence 6997 788888999998865432 24566889999999865432 2 22333445689999986 4799999999
Q ss_pred cccCCCC-----cceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec--CCee
Q 008224 208 TGSTDKS-----VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--GKTG 280 (573)
Q Consensus 208 TG~~~~~-----~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~--~~~G 280 (573)
|...... ...+..+++.+..+|.-..|+... .+....+ ..-.||.+++ +.+++|+|+.+... ...+
T Consensus 91 s~~~~~~~~~~~~~~~~~~~~~~~~gP~~~~~~~~~---~~~~~~~---~~~IDp~vf~-Ddd~~~~~~~~~~~~~~~~~ 163 (330)
T 3k1u_A 91 AAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKG---RIKTAWE---SFSLDATIFE-HNEKLYYVWAQQDINIKGHS 163 (330)
T ss_dssp EEESSSCCBTTBCCCEEEEEEECSSSTTSSCCEEEE---ECCCSSC---SCEEEEEEEE-ETTEEEEEEEECCTTSSSSB
T ss_pred EeccCCCCCCcccceeeeEEEeCCCCCccccccccc---cccCCCC---CCccCceEEE-ECCccEEEEeecCCCcCCCc
Confidence 9654321 123345555555555545676531 1111111 1236999954 56777777665432 1223
Q ss_pred EEEEEEeCCCCCcEEccccc--cc------CCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCC
Q 008224 281 ISLVYQTTDFKTYELLDEYL--HA------VPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDT 345 (573)
Q Consensus 281 ~illY~S~Dl~~W~~~~~l~--~~------~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~ 345 (573)
.+.+.+-+| .++..++.. .. ..+...-|-|-+|+.+ .+++|..|....
T Consensus 164 ~i~i~~l~~--~~~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~---------------G~YYL~ys~~~~ 219 (330)
T 3k1u_A 164 NIYIAEMEN--PWTLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN---------------GKIFITYSASAT 219 (330)
T ss_dssp EEEEEEEEE--TTEECSCCEEEECSCSGGGCSSSCBEEEEEEEEET---------------TEEEEEEEESCS
T ss_pred eEEEEECCC--CccccCCcEEecCCCccccccCCceeeCCEEEEEC---------------CEEEEEEEeCCC
Confidence 344444332 134433321 11 1122356999998874 278888776543
|
| >1uv4_A Arabinase, arabinan-endo 1,5-alpha-L-arabinase; hydrolase, propeller, catalysis; 1.50A {Bacillus subtilis} SCOP: b.67.2.1 | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-05 Score=78.54 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=90.6
Q ss_pred cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc--CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEc
Q 008224 131 NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI--HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYT 208 (573)
Q Consensus 131 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV--hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 208 (573)
-.|. +++++|+|||||..+..+. .+...++|+|+|+. .|++....|..... +......+++++++||+.+|+|.
T Consensus 74 wAP~-v~~~~G~yylyyt~~~~~~--~~~~i~va~s~~p~~Gpw~~~~~~l~~~~~-~~~~~iDp~vf~d~dG~~Yl~~g 149 (293)
T 1uv4_A 74 WAPD-IQYYNGKYWLYYSVSSFGS--NTSAIGLASSTSISSGGWKDEGLVIRSTSS-NNYNAIDPELTFDKDGNPWLAFG 149 (293)
T ss_dssp EEEE-EEEETTEEEEEEEECCTTC--SCEEEEEEEESCTTTTCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEEC
T ss_pred ecce-EEEECCEEEEEEEecCCCC--CcceEEEEECCCCCCCCCccCCccEecCCC-CCCCCCCCCeEECCCCCEEEEEE
Confidence 3455 6778999999999765432 24568999999997 89987654543221 12245688888788999999996
Q ss_pred ccCCCCcceEEEEEe-cCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCeeEE
Q 008224 209 GSTDKSVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGIS 282 (573)
Q Consensus 209 G~~~~~~q~q~lA~S-~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G~i 282 (573)
+.. +.+.++.. .|. .++...+ ..|+..+.+ ...+=.|.+ ++ .+|+|||++.+.. +..-.+
T Consensus 150 ~~~----~~i~~~~l~~d~-----~~~~g~~-~~i~~~~~~--~~~~EgP~i-~k-~~g~yyL~~s~~~~~~g~~~~y~~ 215 (293)
T 1uv4_A 150 SFW----SGIKLTKLDKST-----MKPTGSL-YSIAARPNN--GGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKI 215 (293)
T ss_dssp BST----TCEEEEEECTTT-----CSEEEEE-EEEECCTTT--TTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEE
T ss_pred ecC----CCEEEEEECchh-----CccCCcc-eEEeecCCC--CCccCccEE-EE-ECCEEEEEEEeCCCcCCCCCcceE
Confidence 532 22344443 332 2333210 113322211 123346888 44 5899999987641 222246
Q ss_pred EEEEeCCCC-CcEEc
Q 008224 283 LVYQTTDFK-TYELL 296 (573)
Q Consensus 283 llY~S~Dl~-~W~~~ 296 (573)
.+++|+++. -|+..
T Consensus 216 ~~~~s~~~~GP~~~~ 230 (293)
T 1uv4_A 216 AYGRSKSITGPYLDK 230 (293)
T ss_dssp EEEEESSTTCCCBCT
T ss_pred EEEEeCCCCCCCCcc
Confidence 788999875 57654
|
| >3qz4_A Endo-1,4-beta-xylanase D; 5-bladed beta-propeller fold, xylan degradation, structural joint center for structural genomics, JCSG; HET: EPE; 1.74A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-05 Score=82.31 Aligned_cols=168 Identities=15% Similarity=0.102 Sum_probs=101.8
Q ss_pred cccccccceeeeecCC--Ccc----cCCcceeEE----CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeecceecc
Q 008224 112 AMFTWQRTSFHFQPEK--NWM----NDPNGPLFY----KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMV 180 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~--gWm----NDPNG~~y~----~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~ 180 (573)
.+..|+....-|.+.. .|. --|. ++++ +|+|||||..+..+. +....|.|+|+|.. .|+.++..|.
T Consensus 53 DLv~W~~~g~~l~~~~~~~~~~~~~wAP~-v~~~~~~~~Gkyylyyt~~~~~~--~~~~i~va~s~~p~Gpw~~~~~p~~ 129 (311)
T 3qz4_A 53 NLKTWKEETVILEMGKNVSWANGNAWAPC-IEEKKIDGKYKYFFYYSANPTTN--KGKQIGVAVADSPTGPFTDLGKPII 129 (311)
T ss_dssp SSSSCEECCCCEEBTTTBTTEEEEEEEEE-EEEEEETTEEEEEEEEEEEETTC--SSCEEEEEEESSTTCCCEECSSCSB
T ss_pred CCCCcEECceecccccCCCcccCCcCCCe-eEEeeecCCCEEEEEEEeccCCC--CCeeEEEEEECCCCCCceECCcceE
Confidence 3556765544444432 332 2465 6788 999999999865432 24678999999976 8998764333
Q ss_pred CCCCcCCCcEEeeeEEEcc-CCeEEEEEcccCCCCcceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCC---CCCCCC
Q 008224 181 PDQWYDINGVWTGSATILP-DGQIVMLYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHI---GPKDFR 255 (573)
Q Consensus 181 Pd~~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~~~~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~---~~~~fR 255 (573)
.........+..+++++++ ||+.+|+|.+ +.+.+|. +.| +.+|+.. ...++. |.+. ....+-
T Consensus 130 ~~~~~g~~~~iDp~vf~dd~dG~~yl~~g~------~~i~~~~l~~d-----~~~~~~~-~~~i~~-~~~~~~~~~~~~E 196 (311)
T 3qz4_A 130 TSSPTGRGQQIDVDVFTDPVSGKSYLYWGN------GYMAGAELNDD-----MLSIKEE-TTVVLT-PKGGTLQTYAYRE 196 (311)
T ss_dssp CSCTTSSSBSCCCEEEECTTTCCEEEEECB------SSCEEEEBCTT-----SSSBCGG-GCEECC-CCCCCTTTTCCCE
T ss_pred cCCCCCCcccccccEEEECCCCcEEEEEcC------CCEEEEEeCCc-----ccccCCC-ceEEeC-CCCCcccccceee
Confidence 3221112346788988877 9999999975 1233443 444 2455432 123332 2221 111234
Q ss_pred CCeeEeecCCCcEEEEEeeecCCee--EEEEEEeCCCC-CcEEcc
Q 008224 256 DPTTAWAGPDGKWRLTIGSKIGKTG--ISLVYQTTDFK-TYELLD 297 (573)
Q Consensus 256 DP~V~w~~~dG~w~MvvGs~~~~~G--~illY~S~Dl~-~W~~~~ 297 (573)
-|++ ++ .+|+|||++.+...... .+.+++|+++. -|+..+
T Consensus 197 gP~i-~k-~~g~YyL~~s~~~~~~~~y~~~~~~S~~~~GPw~~~~ 239 (311)
T 3qz4_A 197 APYV-IY-RKGIYYFFWSVDDTGSPNYHVVYGTAQSPLGPIEVAK 239 (311)
T ss_dssp EEEE-EE-ETTEEEEEEEESCTTSTTCEEEEEEESSTTCCCEEEE
T ss_pred ccEE-EE-ECCEEEEEEEcCCCCCCCceEEEEEcCCCCCCCEeCC
Confidence 5888 44 58999999887532211 56678999987 498864
|
| >1gyh_A Arabinan endo-1,5-alpha-L-arabinosidase A; arabinanase, hydrolase, propeller, catalysis, pseudomonas; 1.89A {Cellvibrio cellulosa} SCOP: b.67.2.1 PDB: 1gyd_B 1gye_B* | Back alignment and structure |
|---|
Probab=98.06 E-value=7.9e-05 Score=76.18 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=90.5
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc--cC----eeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL--IH----WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL--Vh----W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
.|. +++++|+|||||..+..+. .....|+|+|+|+ .. |++.+..+.+....+......+++++++||+.+|
T Consensus 66 AP~-v~~~~g~~ylyyt~~~~~~--~~~~igva~s~~~dp~gp~~~w~~~~~v~~~~~~~~~~~~iDp~vf~D~dG~~Yl 142 (318)
T 1gyh_A 66 APD-IYQHKGLFYLYYSVSAFGK--NTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWM 142 (318)
T ss_dssp EEE-EEEETTEEEEEEEECCTTS--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEE
T ss_pred cCe-EEEECCEEEEEEEeccCCC--CcceEEEEEeCCCCCCCCCcceecCCcccccCCCCCCCCcccCCeEECCCCCEEE
Confidence 454 6778999999999765432 2356799999983 23 9987655543222223346688988878999999
Q ss_pred EEcccCCCCcceEEEEEe-cCCC-CCCcceEEEeCCC--ce-ecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee-----
Q 008224 206 LYTGSTDKSVQVQNLAYP-ADPS-DPLLLDWVKYPGN--PV-LVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK----- 275 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA~S-~D~~-Dp~L~~W~K~~~n--PV-l~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~----- 275 (573)
+|.+.. +.+.+|.. .|.. -..+.+|+....+ ++ +... ......+=-|.+ ++ .+|+|||++.+.
T Consensus 143 ~~g~~~----~~i~~~~l~~d~~~~g~~~~w~~~~~~~~~~~~~~~-~~~~~~~EgP~i-~k-~~g~yYL~~s~~~~~~g 215 (318)
T 1gyh_A 143 SFGSFW----GGLKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDS-QAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRK 215 (318)
T ss_dssp EECBST----TCEEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTT-SCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCG
T ss_pred EeeccC----CCEEEEEeCCccccccceeecceecccCcceeeccc-CCCCcceeccEE-EE-ECCEEEEEEEeCCCcCC
Confidence 997642 22344543 3310 0013467653111 21 1110 111122346777 44 589999998753
Q ss_pred cCCeeEEEEEEeCCCC-CcEEc
Q 008224 276 IGKTGISLVYQTTDFK-TYELL 296 (573)
Q Consensus 276 ~~~~G~illY~S~Dl~-~W~~~ 296 (573)
.+..-.+.+++|+++. -|+..
T Consensus 216 ~~~~y~~~~~rS~s~~GP~~~~ 237 (318)
T 1gyh_A 216 GDSTYHLVVGRSKQVTGPYLDK 237 (318)
T ss_dssp GGCCCEEEEEEESSTTSCCBCT
T ss_pred CCCcceEEEEEcCCCCCCCCcC
Confidence 1122256788998875 57764
|
| >3kst_A Endo-1,4-beta-xylanase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00011 Score=75.04 Aligned_cols=166 Identities=16% Similarity=0.093 Sum_probs=99.4
Q ss_pred cccccccceeeeecCCCcc----cCCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceeecce-eccCCC
Q 008224 112 AMFTWQRTSFHFQPEKNWM----NDPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPI-AMVPDQ 183 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gWm----NDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~-AL~Pd~ 183 (573)
.+..|.....=|.+...|. -.|. +++. +|+|||||..+ ...+.|+|+|.. .|+.... .|..
T Consensus 57 DLv~W~~~g~~l~~~~~~~~~~~wAP~-v~~~~~~g~~yl~yt~~--------~~i~va~s~~p~Gpw~~~~~~p~~~-- 125 (306)
T 3kst_A 57 DLKNWKREGQALSATDSYGTWGFWAPE-VYYVESKKKFYLFYSAE--------EHICVATSTTPEGPFRQEVKQPIWS-- 125 (306)
T ss_dssp SSSEEEEEEEEEEGGGSSCSSCCEEEE-EEEETTTTEEEEEEEET--------TEEEEEEESSTTCCCBCSSCCCSSS--
T ss_pred CccccEECceecCCCCcccccccccCe-EEEECCCCEEEEEEECC--------CcEEEEEcCCCCCCcEeCCCccccC--
Confidence 3556766665555554453 2343 4577 99999999875 257899999977 7987531 1211
Q ss_pred CcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCCC---CCCCCCCee
Q 008224 184 WYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIG---PKDFRDPTT 259 (573)
Q Consensus 184 ~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~~---~~~fRDP~V 259 (573)
.....+++++++||+.+|+|..... .+.+.+|. +.| +.+|.......++.+...+. ...+--|.+
T Consensus 126 ----~~~iDp~vf~D~dG~~Yl~~~~~~~--g~~i~~~~ls~d-----~~~~~~~~~~~~~~~~~~w~~~~~~~~EgP~i 194 (306)
T 3kst_A 126 ----EKSIDTSLFIDDDGTPYLYFVRFTD--GNVIWVAQMTDD-----LMSIKTETLNQCIKAEVSWELLQGKVAEGPSL 194 (306)
T ss_dssp ----SCCEEEEEEECTTSCEEEEEEEESS--SEEEEEEEBCTT-----SSCBCGGGCEEEECCCSGGGCSSSSBEEEEEE
T ss_pred ----CCcccceEEEeCCCCEEEEEEEeCC--CCEEEEEEeCcc-----cccccCcceeeeccCCccceecCCCceecceE
Confidence 3467899988889999999975322 23344554 333 35665322122332211111 112235777
Q ss_pred EeecCCCcEEEEEeeec--CCeeEEEEEEeCCCC-CcEEc-c-cccc
Q 008224 260 AWAGPDGKWRLTIGSKI--GKTGISLVYQTTDFK-TYELL-D-EYLH 301 (573)
Q Consensus 260 ~w~~~dG~w~MvvGs~~--~~~G~illY~S~Dl~-~W~~~-~-~l~~ 301 (573)
++ .+|+|||++.+.. +..-.+.+++|+++. -|+.. + +++.
T Consensus 195 -~k-~~G~YYL~~S~~~~~~~~y~v~~a~S~s~~GPw~~~~~~pil~ 239 (306)
T 3kst_A 195 -LK-KNGVYYLIYSANHYENKGYGVGYATSDTPMGPWVKYSKNPLLQ 239 (306)
T ss_dssp -EE-ETTEEEEEEEESCTTSTTCEEEEEEESSTTCCCEECTTCCSBS
T ss_pred -EE-ECCEEEEEEEeCCCCCCCceEEEEEeCCCCCCCEeCCCCeeEe
Confidence 43 6899999997642 222246688999976 79883 3 4543
|
| >1w2t_A Beta fructosidase; hydrolase, glycosidase, invertase, raffinose; HET: SUC GLA CIT; 1.87A {Thermotoga maritima} SCOP: b.29.1.19 b.67.2.3 PDB: 1uyp_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=4.7e-05 Score=81.79 Aligned_cols=148 Identities=13% Similarity=0.116 Sum_probs=92.0
Q ss_pred ccccccceeeeecCCCc---ccCCcceeEECCEEEEEEeeCCC-CCCC-CCcEEEEEEecCccCeee--cceeccCCCCc
Q 008224 113 MFTWQRTSFHFQPEKNW---MNDPNGPLFYKGWYHLFYQYNPD-SAVW-GNITWGHAVSADLIHWLY--LPIAMVPDQWY 185 (573)
Q Consensus 113 ~~~w~Rp~yHf~P~~gW---mNDPNG~~y~~G~YHLFYQ~nP~-~~~w-G~~~WGHAvS~DLVhW~~--lp~AL~Pd~~y 185 (573)
+..|++..-=+.|.. + +-.|. ++..+|+|+|||.-+.. ...+ ....-++|+|+|+.+|+. ..+.|.+...-
T Consensus 54 lv~W~~~~~aL~p~~-~~~g~~sgs-av~~~g~~~l~YTg~~~~~~~~~~~~~q~lA~S~D~~~w~k~~~~Pvi~~~p~~ 131 (432)
T 1w2t_A 54 LVHWRHLPVALYPDD-ETHGVFSGS-AVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISKPPEE 131 (432)
T ss_dssp SSSCEEEEEEECCSS-TTEEEEEEE-EEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCSCSST
T ss_pred CcCeEECCccCCCCC-CCCCEEeeE-EEEECCEEEEEEecCccCCCCCCceEEEEEEEeCCCCeEEecCCCceEeCCCcc
Confidence 556754432233422 2 11243 34579999999986543 1112 235689999999999998 44555443211
Q ss_pred CCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCC
Q 008224 186 DINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 186 D~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~d 265 (573)
...+.-..+++. .+|+++|+|.+........+.++.|.|. ++|+... ++... .+ ...|=-|.+ ++ -+
T Consensus 132 ~~~~fRDP~Vf~-~dg~~~m~~g~~~~~~~g~i~ly~S~Dl-----~~W~~~g--~~~~~-~~--g~~~EcP~l-f~-~~ 198 (432)
T 1w2t_A 132 GTHAFRDPKVNR-SNGEWRMVLGSGKDEKIGRVLLYTSDDL-----FHWKYEG--AIFED-ET--TKEIDCPDL-VR-IG 198 (432)
T ss_dssp TEEEEEEEEEEE-CSSSEEEEEEEEETTTEEEEEEEEESSS-----SSCEEEE--EEEEE-TT--CSCCEEEEE-EE-ET
T ss_pred ccccccCCEEEE-ECCEEEEEEEEecCCCCcEEEEEECCCC-----CCceEcc--ccccC-CC--CCEEECCeE-EE-EC
Confidence 123456777654 5999999998754333455778888884 8999863 44332 11 234567888 43 47
Q ss_pred CcEEEEEeee
Q 008224 266 GKWRLTIGSK 275 (573)
Q Consensus 266 G~w~MvvGs~ 275 (573)
|+|+|+++.+
T Consensus 199 g~~vL~~s~~ 208 (432)
T 1w2t_A 199 EKDILIYSIT 208 (432)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEEeCC
Confidence 8999998764
|
| >3cu9_A Intracellular arabinanase; glycosyl hydrolase, high resolution, beta-prope geobacillus stearothermophilus, hydrolase; HET: GOL; 1.06A {Geobacillus stearothermophilus} PDB: 3d61_A* 3d60_A 3d5y_A 3d5z_A* 1wl7_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00058 Score=69.59 Aligned_cols=169 Identities=17% Similarity=0.207 Sum_probs=95.5
Q ss_pred cccccccceeeeecCCCcc------------cCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCc---cC---ee
Q 008224 112 AMFTWQRTSFHFQPEKNWM------------NDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADL---IH---WL 173 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gWm------------NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL---Vh---W~ 173 (573)
.+..|.+...=|.+...|. -.|. ++|++|+|||||..+..+. .....|+|+|+|+ -. |+
T Consensus 52 DLv~W~~~g~~l~~~~~~~~~~~~~~~~~~~wAP~-v~~~~g~yylyyt~~~~~~--~~~~igva~s~~~dP~gp~~~w~ 128 (314)
T 3cu9_A 52 DGVHWENMGWVFPSLPDWYKQYVPEKDEDHLWAPD-ICFYNGIYYLYYSVSTFGK--NTSVIGLATNQTLDPRDPDYEWK 128 (314)
T ss_dssp SSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEE-EEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCE
T ss_pred CCCCccCCCcccCCcchhhhccCCCcccCceecCc-EEEECCEEEEEEEeccCCC--CCceEEEEEeCCCCCCCCCcCcc
Confidence 3556765544444443442 2344 5678999999999775432 2456899999984 23 99
Q ss_pred ecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEec-CCCCCCcceEEEeCCCceecCCCCCCCC
Q 008224 174 YLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPA-DPSDPLLLDWVKYPGNPVLVPPRHIGPK 252 (573)
Q Consensus 174 ~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~-D~~Dp~L~~W~K~~~nPVl~~p~g~~~~ 252 (573)
+.+..+.... .+......+++++++||+.+|+|.+... .+.++... |.+.+. ..|+. ..+..... ...
T Consensus 129 ~~~~~~~~~~-~~~~~~iDp~vf~D~dG~~Yl~~g~~~~----~i~~~~l~~d~~~~~-~~~~~---~~~~~~~~--~~~ 197 (314)
T 3cu9_A 129 DMGPVIHSTA-SDNYNAIDPNVVFDQEGQPWLSFGSFWS----GIQLIQLDTETMKPA-AQAEL---LTIASRGE--EPN 197 (314)
T ss_dssp EEEEEEEECT-TSSSCCCSCEEEECTTSCEEEEECBSTT----CEEEEECCTTTCSCC-TTCCC---EEEECCSS--SSC
T ss_pred cCCeEecCCC-CCCCCccCCCeEEcCCCCEEEEEeccCC----cEEEEEECcccCccc-CCCce---EEecccCC--CCC
Confidence 8765443321 1223456888888889999999987421 23444432 221111 01110 01111111 112
Q ss_pred CCCCCeeEeecCCCcEEEEEeee-----cCCeeEEEEEEeCCCC-CcEEc
Q 008224 253 DFRDPTTAWAGPDGKWRLTIGSK-----IGKTGISLVYQTTDFK-TYELL 296 (573)
Q Consensus 253 ~fRDP~V~w~~~dG~w~MvvGs~-----~~~~G~illY~S~Dl~-~W~~~ 296 (573)
.+=-|.+ ++ .+|+|||++.+. .+..-.+.+++|+++. -|+..
T Consensus 198 ~~EgP~i-~k-~~G~yyL~~s~~~~~~g~~~~y~~~~~~s~s~~GP~~~~ 245 (314)
T 3cu9_A 198 AIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKIAVGRSKDITGPYVDK 245 (314)
T ss_dssp CEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEEEEEEESSTTSCCBCT
T ss_pred ccCccEE-EE-ECCEEEEEEEcCCcccCCCCcceEEEEEeCCCCCCCCcC
Confidence 2346777 44 589999998753 1112246688999875 57654
|
| >3qee_A Beta-xylosidase/alpha-L-arabinfuranosidase, Gly43; 5-bladed beta propeller, hydrolase; 1.64A {Cellvibrio japonicus} PDB: 3qed_A* 3qef_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0004 Score=70.93 Aligned_cols=143 Identities=11% Similarity=0.002 Sum_probs=87.2
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-Ceee-cceeccCCC----CcCCCcEEeeeEEEccCCeEEE
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLY-LPIAMVPDQ----WYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~-lp~AL~Pd~----~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
-|. +++++|+|||||..+..+..+ ....|.|+|+|.. .|++ .+..|.... .........+++++++||+.+|
T Consensus 77 AP~-i~~~~Gkyylyyt~~~~~~~~-~~~i~va~s~~p~Gpw~~~~~~pl~~~~~~~~~~~~~~~iDp~vf~DddG~~Yl 154 (307)
T 3qee_A 77 ASQ-VIERNGKFYWYVTVRHDDTKP-GFAIGVAVGDSPIGPFKDALGKALITNDMTTDTPIDWDDIDPSVFIDDDGQAYL 154 (307)
T ss_dssp EEE-EEEETTEEEEEEEEEECTTSC-SEEEEEEEESSTTCCCEESSSSCSBCGGGCCSSCCSCCSCCCEEEECTTSCEEE
T ss_pred Cce-EEEECCEEEEEEEeccCCCCC-ceEEEEEEECCCCCCCEeCCCCeeEecCccccCCCCcCcccCceEECCCCCEEE
Confidence 465 678899999999977544332 3578999999954 8998 343222211 0011235688888878999999
Q ss_pred EEcccCCCCcceEEEE-EecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEE
Q 008224 206 LYTGSTDKSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLV 284 (573)
Q Consensus 206 ~YTG~~~~~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ill 284 (573)
+|.+. ...++ .+.| +.+|.... ..|..+. ..+=-|.+ ++ .+|+|||++.+.. .-.+.+
T Consensus 155 ~~g~~------~i~~~~l~~d-----~~~~~g~~--~~i~~~~----~~~EgP~i-~k-~~g~YyL~~s~~~--~~~~~~ 213 (307)
T 3qee_A 155 FWGNT------RPRYAKLKKN-----MVELDGPI--RAIEGLP----EFTEAIWV-HK-YQDNYYLSYAMGF--PEKIGY 213 (307)
T ss_dssp EECSS------SCEEEEECTT-----SSSEEEEE--EECCCCT----TEEEEEEE-EE-CC-CEEEEEEETT--TTEEEE
T ss_pred EEeCC------cEEEEEECCc-----cccccCce--EEeCCCC----CccCceEE-EE-ECCEEEEEEECCC--CcEEEE
Confidence 99753 12233 3444 35665421 1121111 12336777 44 6899999988742 224557
Q ss_pred EEeCCCC-CcEEcc
Q 008224 285 YQTTDFK-TYELLD 297 (573)
Q Consensus 285 Y~S~Dl~-~W~~~~ 297 (573)
.+|+++. -|+..+
T Consensus 214 ~~s~~~~GP~~~~~ 227 (307)
T 3qee_A 214 AMGKSIKGPWVYKG 227 (307)
T ss_dssp EEESSTTCCCEEEE
T ss_pred EECCCCCCCcEECC
Confidence 7999986 788764
|
| >3c2u_A Xylosidase/arabinosidase; tetramer, glycoside hydrolase, GH43, alpha-L- arabinofuranosidase; HET: B3P; 1.30A {Selenomonas ruminantium} PDB: 1y7b_A* 1yi7_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0016 Score=71.46 Aligned_cols=152 Identities=14% Similarity=0.151 Sum_probs=91.0
Q ss_pred ccCCcceeEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCccC-eeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLIH-WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~DLVh-W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
+--|. ++|++|+|+|||..... +..+.+...+.|+|+|... |++ |..+.. ..+.+++++++||+.+|+|
T Consensus 72 ~WAP~-i~~~~g~~yly~t~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~~-------~~iDp~~f~DddG~~Yl~~ 142 (538)
T 3c2u_A 72 IWAPD-LSYADGKFWLIYTDVKVVDGMWKDCHNYLTTAEDIKGPWSK-PILLNG-------AGFDASLFHDPSGKKYLVN 142 (538)
T ss_dssp ECSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTCCCCC-CEEEEC-------SCSCCEEEECTTSCEEEEE
T ss_pred EECCe-EEEECCEEEEEEEeccCCCCCcccccEEEEEECCCCCCccc-cEecCC-------CcCCCeeEECCCCCEEEEE
Confidence 44565 78899999999985321 2223345678999999885 986 443421 2457888888899999999
Q ss_pred cccCC--C--CcceEEEEEe-cCCCCCCcceEEEeCCCc-eecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee-
Q 008224 208 TGSTD--K--SVQVQNLAYP-ADPSDPLLLDWVKYPGNP-VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG- 280 (573)
Q Consensus 208 TG~~~--~--~~q~q~lA~S-~D~~Dp~L~~W~K~~~nP-Vl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G- 280 (573)
..... . ..+.+.+|.- .|. ++ ..+.+ +|..+.+ ....=-|++ ++ .+|+|||++.+.....+
T Consensus 143 ~~~~~~~~~~~~~~i~~~~l~~d~-------~~-~~g~~~~i~~~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~~ 210 (538)
T 3c2u_A 143 MYWDQRVYHHNFYGIALQEYSVAE-------EK-LIGKPEIIYKGTD--IAYTEGPHL-YY-INDMYYLMTAEGGTTYQH 210 (538)
T ss_dssp EEECCCTTSCSEEEEEEEEEETTT-------TE-ECSCCEEEECCCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTTC
T ss_pred EecCCccCCCCCCCEEEEEECCcc-------CC-CCCCCEEEecCCC--CCccccceE-EE-ECCEEEEEEecCCCCCCe
Confidence 74321 1 1234455543 332 11 11222 2222211 122346887 44 68999999876421112
Q ss_pred EEEEEEeCCCC-CcEEcc--ccccc
Q 008224 281 ISLVYQTTDFK-TYELLD--EYLHA 302 (573)
Q Consensus 281 ~illY~S~Dl~-~W~~~~--~l~~~ 302 (573)
.+.+++|+++. -|+..+ +++..
T Consensus 211 ~~~~~rS~s~~GP~~~~~~~pil~~ 235 (538)
T 3c2u_A 211 SETIARSKTIHGPYEIQPDYPLLSA 235 (538)
T ss_dssp EEEEEEESSTTCCCEECTTCCSBCC
T ss_pred EEEEEEECCCCCCCccCCCCceEec
Confidence 46788999976 788864 45543
|
| >1yrz_A Xylan beta-1,4-xylosidase; structural genomics, nysgxrc target T1997, PSI, structure initiative; 2.00A {Bacillus halodurans} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=72.27 Aligned_cols=154 Identities=12% Similarity=0.083 Sum_probs=90.7
Q ss_pred ccCCcceeEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEE
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLY 207 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 207 (573)
+-.|. ++|++|+|||||..... +..+.....+.|+|+|.. .|++ |..+ ....+.+++++++||+.+|+|
T Consensus 74 ~wAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~-------~~~~iDp~vf~D~dG~~Yl~~ 144 (528)
T 1yrz_A 74 IWAPC-LSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSD-PIYL-------NSSGFDPSLFHDDDGRKWLVN 144 (528)
T ss_dssp ECSCE-EEEETTEEEEEEEEEEECSSSCCEEEEEEEEESSSSSCCCC-CEEC-------CCSCSCCEEEECTTSCEEEEE
T ss_pred EECCe-EEEECCEEEEEEecccCCCCCcccceEEEEEeCCCCCCccc-cEEC-------CCCcCCCceEECCCCCEEEEE
Confidence 45665 78899999999985321 222334557899999987 4986 4333 123567888888899999995
Q ss_pred cccC--CC--CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCC-eeEE
Q 008224 208 TGST--DK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGK-TGIS 282 (573)
Q Consensus 208 TG~~--~~--~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~-~G~i 282 (573)
.... .. ..+.+.+|...+. ..+.... ...|+.. .+ ...+=-|++ ++ .+|+|||++.+.... .-.+
T Consensus 145 ~~~~~~~~~~~~~~i~~~~l~~d----~~~~~g~-~~~i~~~-~~--~~~~EgP~i-~k-~~G~YYL~~s~~g~~~~~~~ 214 (528)
T 1yrz_A 145 MIWDYRKGNHPFAGIILQEYSEA----EQKLVGP-VKNIYKG-TD--IQLTEGPHL-YK-KDGYYYLLVAEGGTEYEHAA 214 (528)
T ss_dssp EEECCCTTSCSEEEEEEEEEETT----TTEEEEE-EEEEECC-CT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEE
T ss_pred eeccCCCCCCCCCeEEEEEECCc----cCCCCCC-CEEEEcC-CC--CCccCCCEE-EE-ECCEEEEEEeCCCCCCCcEE
Confidence 4321 11 1234555543221 1222221 1123321 11 122346887 44 589999998764211 1246
Q ss_pred EEEEeCCCC-CcEEcc--ccccc
Q 008224 283 LVYQTTDFK-TYELLD--EYLHA 302 (573)
Q Consensus 283 llY~S~Dl~-~W~~~~--~l~~~ 302 (573)
.+++|+++. -|+... +++..
T Consensus 215 ~~~rs~~~~GP~~~~~~~pil~~ 237 (528)
T 1yrz_A 215 TLARSQSIDGPYETDPSYPLVTS 237 (528)
T ss_dssp EEEEESSTTCCCEECTTCCSEEC
T ss_pred EEEEECCCCCCCCcCCCCeEEEe
Confidence 688999987 799874 45543
|
| >1yif_A Beta-1,4-xylosidase; glycosidase, xylan, structural genomics, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.29.1.23 b.67.2.1 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0027 Score=69.42 Aligned_cols=154 Identities=12% Similarity=0.106 Sum_probs=91.4
Q ss_pred CcccCCcceeEECCEEEEEEeeC-CCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYN-PDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~n-P~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
+-+--|. ++|++|+|+|||... ..+..|.....+.|+|+|.. .|++ |+.+.. ..+.+++++++||+.+|
T Consensus 70 ~~~WAP~-i~~~~g~~yl~yt~~~~~~g~~~~~~~~va~s~~p~Gpw~~-p~~~~~-------~~iDp~~f~D~dG~~Yl 140 (533)
T 1yif_A 70 GGVWAPC-LSYSDGKFWLIYTDVKVVDGAWKDCHNYLVTCETINGDWSE-PIKLNS-------SGFDASLFHDTDGKKYL 140 (533)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECCC-------SCSCCEEEECTTSCEEE
T ss_pred CCEECce-EEEECCEEEEEEEeccCCCCCcccccEEEEEeCCCCCCccc-cEEcCC-------CcCCCceEECCCCCEEE
Confidence 3355676 788999999999853 22223444567899999986 6986 443321 24678888888999999
Q ss_pred EEcccCC-CC---cceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee
Q 008224 206 LYTGSTD-KS---VQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (573)
Q Consensus 206 ~YTG~~~-~~---~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G 280 (573)
+|.+... .+ .+.+.+|. +.|. .+... +...|+. +.+ ....=-|++ ++ .+|+|||++.+.....+
T Consensus 141 ~~~~~~~~~g~~~~~~i~~~~l~~d~-----~~~~g-~~~~i~~-~~~--~~~~EgP~i-~k-~~G~YYL~~s~gg~~~~ 209 (533)
T 1yif_A 141 LNMLWDHRIDRHSFGGIVIQEYSDKE-----QKLIG-KPKVIFE-GTD--RKLTEAPHL-YH-IGNYYYLLTAEGGTRYE 209 (533)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEECS-CCEEEEC-CCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEEecccccCCCCCCCEEEEEECCcc-----CCCCC-CcEEEEc-CCC--CCccccceE-EE-ECCEEEEEEeCCCCCCC
Confidence 9974321 11 23344553 3332 22111 1112222 111 112336777 44 58999999876421112
Q ss_pred -EEEEEEeCCCC-CcEEcc--cccc
Q 008224 281 -ISLVYQTTDFK-TYELLD--EYLH 301 (573)
Q Consensus 281 -~illY~S~Dl~-~W~~~~--~l~~ 301 (573)
.+.+++|+++. -|+..+ +++.
T Consensus 210 ~~v~~~rs~s~~GP~~~~~~~pil~ 234 (533)
T 1yif_A 210 HAATIARSANIEGPYEVHPDNPILT 234 (533)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSEE
T ss_pred eEEEEEEECCCCceeeeCCCCceEe
Confidence 56788999876 788864 3554
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0014 Score=72.02 Aligned_cols=149 Identities=12% Similarity=0.125 Sum_probs=88.8
Q ss_pred CCcceeEE--CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCC---CcC----CCcEEeeeEEEccCC
Q 008224 132 DPNGPLFY--KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQ---WYD----INGVWTGSATILPDG 201 (573)
Q Consensus 132 DPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~---~yD----~~Gv~SGSavv~~dG 201 (573)
-|. ++|+ +|+|||||.... +..++....|.|+|+|.. .|++... +.|-. ..| ......+++++++||
T Consensus 119 AP~-v~~~~~~Gkyymy~~~~~-~~~~~~~~igvats~~p~Gpw~~~g~-~~p~~~~g~~~~~~~~~~~iDp~vf~D~dG 195 (526)
T 3vsf_A 119 RPK-VMYNASTGEFVMWMHWEN-GINYGQARAAVAYSKTPDGKFTYIRS-FRPMQDTGVMDHGLPGYMSRDCNVFVDTDG 195 (526)
T ss_dssp EEE-EEECTTTCCEEEEEEEEC-SSCSCCCEEEEEEESSSSSCCEEEEE-ECSSCTTCCEETTEESCCCCSEEEEECTTS
T ss_pred CCE-EEEECCCCEEEEEEEeeC-CCCCCcceEEEEEcCCCCCCCEeccc-cccccccccccCCCCCcccccccEEECCCC
Confidence 343 5665 799999998762 233456789999999987 7987643 22211 111 245678888888899
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCe-e
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKT-G 280 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~-G 280 (573)
+.+|+|.+..+ ..+.++.-.+. +.++.... ..+. . + ..+=.|++ ++ .+|+|||++....... -
T Consensus 196 ~~Yl~~~~~~~---~~i~i~~l~~d----~~~~~~~~-~~~~-~--g---~~~EgP~i-~k-~~G~YYL~~S~~tg~~~~ 259 (526)
T 3vsf_A 196 KGYFISAANEN---MDLHLYELTPD----YKNIASLK-AKLF-V--G---QQREAPCL-IK-RNGYYYLITSGCTGWNPN 259 (526)
T ss_dssp CEEEEEEETTT---TEEEEEEECTT----SSSEEEEE-EEES-T--T---SCCEEEEE-EE-SSSCEEEEEECCCTTSCC
T ss_pred CEEEEEEecCC---CceEEEEcCCC----cccccCce-EEeC-C--C---CCcCCeEE-EE-ECCEEEEEEcCCCCcCCC
Confidence 99999986432 23344433221 23444321 1111 1 1 22347888 54 6899999986432111 1
Q ss_pred EEEEEEeCCCC-CcEEcccc
Q 008224 281 ISLVYQTTDFK-TYELLDEY 299 (573)
Q Consensus 281 ~illY~S~Dl~-~W~~~~~l 299 (573)
.+.+++|+++. -|+..+.+
T Consensus 260 ~~~~a~S~s~~GPw~~~~~~ 279 (526)
T 3vsf_A 260 QAKYAYSKDLASGWSQLYNL 279 (526)
T ss_dssp CEEECEESCSSSCCCCCEEE
T ss_pred ceEEEEeCCCCCCceeCCcc
Confidence 45678898865 46654443
|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0013 Score=71.05 Aligned_cols=144 Identities=19% Similarity=0.213 Sum_probs=85.6
Q ss_pred cCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceec-cCCCCcCCC--cEEeeeEEEccCC
Q 008224 125 PEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAM-VPDQWYDIN--GVWTGSATILPDG 201 (573)
Q Consensus 125 P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL-~Pd~~yD~~--Gv~SGSavv~~dG 201 (573)
|...+.-||+ ++..+|+++|||-....... ++...-.+..+|.......+..| .|+..|+.. .+.-|..++..+|
T Consensus 129 ~~~~~~IDp~-vf~ddG~~Yl~~g~~~~~~~-~~~~i~i~~l~~~~~~~g~~~~i~~~~~~we~~g~~~~EGP~i~k~~G 206 (468)
T 3akh_A 129 PVSSFSLDAT-TFVVNGVRHLAWAQRNPAED-NNTSLFIAKMANPWTISGTPTEISQPTLSWETVGYKVNEGPAVIQHGG 206 (468)
T ss_dssp SSCSCEEEEE-EEEETTEEEEEEEECCTTSS-SSBEEEEEEEEETTEEEEEEEEEECCCSGGGCSSSCBEEEEEEEEETT
T ss_pred CCCCCcCcCe-EEEECCEEEEEEEccCCCCC-CCCcEEEEEeCCCceecCccEEecCCCcccccCCCccccCCEEEEECC
Confidence 3456778998 55589999999964321111 12233345555654433333333 354445443 3778888888899
Q ss_pred eEEEEEcccCCCCcceEEEEEecCCCCCCc-ceEEEeCCCceecCCCCCCCCCCCC---CeeEeecCCCc-EEEEEeee
Q 008224 202 QIVMLYTGSTDKSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVPPRHIGPKDFRD---PTTAWAGPDGK-WRLTIGSK 275 (573)
Q Consensus 202 ~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L-~~W~K~~~nPVl~~p~g~~~~~fRD---P~V~w~~~dG~-w~MvvGs~ 275 (573)
.++|+|.+........+++|+|+..++++. ..|+|. ++|||...+. ..+.- ..+ ...++|+ |+|++-+.
T Consensus 207 ~YYL~ys~~g~~~~y~v~~a~s~~~~~~~gP~~w~~~-~~pvl~~~~~---~~~~g~GH~sv-v~~~~G~~~~~vyH~~ 280 (468)
T 3akh_A 207 KVFLTYSASATDANYCLGMLSASASADLLNAASWTKS-SQPVFKTSEA---TGQYGPGHNSF-TVSEDGKSDILVYHDR 280 (468)
T ss_dssp EEEEEEEESCSSTTCEEEEEEEETTSCTTSGGGCEEC-SSCSBCCBTT---TTBEEEEEEEE-EECTTSCSEEEEEEEE
T ss_pred EEEEEEEeCCCCCCceEEEEEECCCCCCCCcHHhccC-CceEEEeCCC---CceEeCCCceE-EECCCCCEEEEEEecc
Confidence 999999976433334677888874334433 369987 6899975321 11211 223 4456785 98887654
|
| >1w18_A Levansucrase; transferase, fructosyl transferase, glycosyltransferase; 2.5A {Gluconacetobacter diazotrophicus} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0014 Score=71.42 Aligned_cols=143 Identities=17% Similarity=0.164 Sum_probs=88.1
Q ss_pred ECCEEEEEEeeCCCCCC-CC------CcEEE------EEEec--CccCeeecceeccCCC-CcC------CCcEEeeeEE
Q 008224 139 YKGWYHLFYQYNPDSAV-WG------NITWG------HAVSA--DLIHWLYLPIAMVPDQ-WYD------INGVWTGSAT 196 (573)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~-wG------~~~WG------HAvS~--DLVhW~~lp~AL~Pd~-~yD------~~Gv~SGSav 196 (573)
.+|+|||||.-.-.... -| ....+ |+.++ +|.+|+.+.+.+.++. .|+ ....-...++
T Consensus 173 ~dG~i~LFYTg~~~~~~~~g~~~~~~~Q~Ia~a~~~l~a~~dgv~~~~w~k~~~l~~~DG~~Yqt~~q~~~~~fRDP~vf 252 (493)
T 1w18_A 173 HGNTVSVFYTDVAFNRDANANNITPPQAIITQTLGRIHADFNHVWFTGFTAHTPLLQPDGVLYQNGAQNEFFNFRDPFTF 252 (493)
T ss_dssp TSCEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEEE
T ss_pred CCCEEEEEEEecccccccccccCCcceeEEEEeccceeccCCCccccccccCCceeecCccccccccccCCccccCCEEE
Confidence 58999999985422111 11 13344 33333 3788998888888875 343 2344577777
Q ss_pred Ecc--CCeEEEEEcccCCCC----------------------------------cceEEEEEecCCCCCCcceEEEeCCC
Q 008224 197 ILP--DGQIVMLYTGSTDKS----------------------------------VQVQNLAYPADPSDPLLLDWVKYPGN 240 (573)
Q Consensus 197 v~~--dG~~~~~YTG~~~~~----------------------------------~q~q~lA~S~D~~Dp~L~~W~K~~~n 240 (573)
.++ ||+.+|+|.+++... ...+.||...+. .|..|+-+ .
T Consensus 253 ~D~~~dG~~YmvFeant~~~~g~~~~~~~~~~y~~~~~~~~~~~~~~~~~a~~~~g~IGLa~~~s~---Dl~~We~~--~ 327 (493)
T 1w18_A 253 EDPKHPGVNYMVFEGNTAGQRGVANCTEADLGFRPNDPNAETLQEVLDSGAYYQKANIGLAIATDS---TLSKWKFL--S 327 (493)
T ss_dssp ECTTSTTCEEEEEEEEBSSCTTCCCCCHHHHCCCTTCTTCCCHHHHHHTTGGGCCEEEEEEEESST---TSCCEEEE--E
T ss_pred ecCCCCCCEEEEEEeccCCCCcccccccccccccCCccccchhhhcccccchhccceEEEEEeCCC---CCccceec--C
Confidence 776 499999999875321 235666887643 25889865 4
Q ss_pred ceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CC---eeEEEEEEeCCCC
Q 008224 241 PVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GK---TGISLVYQTTDFK 291 (573)
Q Consensus 241 PVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~---~G~illY~S~Dl~ 291 (573)
|++..+. . ...+=-|.|+. .+|+|||+..++. +. .| +..|.|+.+.
T Consensus 328 PL~~a~~-v-~deiErP~V~~--~~GkyYLFtSs~~~t~a~~~~G~~g-~yg~VSdsl~ 381 (493)
T 1w18_A 328 PLISANC-V-NDQTERPQVYL--HNGKYYIFTISHRTTFAAGVDGPDG-VYGFVGDGIR 381 (493)
T ss_dssp EEEECTT-T-BSCCEEEEEEE--ETTEEEEEEEECGGGBCTTCCCCSE-EEEEEESSSE
T ss_pred ccccCCC-C-CCcEECCeEEE--ECCEEEEEEEccCccccCCccCCcc-eEEEEeCCCC
Confidence 7776542 1 23445688843 5899999988652 11 23 3346677654
|
| >3nqh_A Glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.11A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0019 Score=69.60 Aligned_cols=138 Identities=11% Similarity=0.112 Sum_probs=87.3
Q ss_pred eeE--ECCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCC
Q 008224 136 PLF--YKGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD 212 (573)
Q Consensus 136 ~~y--~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~ 212 (573)
++| ++|+|||||..+..+ .+....|.|+|++.. .|++..+.+..+.. .+.+..++++++||+.+|+|.+.
T Consensus 90 V~y~~~dGkYYLyyt~~~~~--~~~~~igVAtSdsP~GPwt~~gpl~~~g~~---~~~IDPsvF~DdDGk~YL~~g~~-- 162 (441)
T 3nqh_A 90 VMKCPSTGEYVMYMHADDMN--YKDPHIGYATCSTIAGEYKLHGPLLYEGKP---IRRWDMGTYQDTDGTGYLLLHGG-- 162 (441)
T ss_dssp EEECTTTCCEEEEEEEEETT--SCSCEEEEEEESSTTSCCEEEEECEETTEE---CCCCSEEEEECTTSCEEEEEGGG--
T ss_pred eEEEccCCEEEEEEEeCCCC--CCcceEEEEEeCCCCCCceEcceeecCCCc---ccccCceEEEeCCCCEEEEeCCC--
Confidence 455 489999999876432 235678999999965 79987654433221 13468888888899999999642
Q ss_pred CCcceEEEE-EecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC-CeeEEEEEEeCCC
Q 008224 213 KSVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDF 290 (573)
Q Consensus 213 ~~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~-~~G~illY~S~Dl 290 (573)
.++ .+.| +.+++.. ++...+ + ..+=-|++ ++ .+|.|||++..... ....+.+++|+++
T Consensus 163 ------~I~eLs~D-----~~~~~g~---~~~i~~-g---~~~EgP~i-~K-~~G~YYL~~S~~~g~~~~~~~~arS~s~ 222 (441)
T 3nqh_A 163 ------IVYRLSKD-----YRTAEEK---VVSGVG-G---SHGESPAM-FK-KDGTYFFLFSNLTSWEKNDNFYFTAPSV 222 (441)
T ss_dssp ------EEEEECTT-----SSSEEEE---EESCST-T---CCCEEEEE-EE-ETTEEEEEEECSCTTSCCCCEEEEESST
T ss_pred ------cEEEeCCc-----cccccCc---eEEeCC-C---CceECcEE-EE-ECCEEEEEEeCCCCcCCCceEEEEeCCC
Confidence 133 3344 3566542 222111 1 12346888 44 68999999876321 1113457889987
Q ss_pred C-CcEEccccc
Q 008224 291 K-TYELLDEYL 300 (573)
Q Consensus 291 ~-~W~~~~~l~ 300 (573)
. -|+..+.++
T Consensus 223 ~GPw~~~g~i~ 233 (441)
T 3nqh_A 223 KGPWTRQGLFA 233 (441)
T ss_dssp TCCCEEEEESS
T ss_pred CCCceECCccC
Confidence 6 688876654
|
| >3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0015 Score=70.81 Aligned_cols=148 Identities=11% Similarity=0.143 Sum_probs=89.6
Q ss_pred CCcceeEE--C--CEEEEEEeeCCCCCCCCCcEEEEEEecCccC-eeec-ce-eccCCC-CcC-CCcEEeeeEEEccCCe
Q 008224 132 DPNGPLFY--K--GWYHLFYQYNPDSAVWGNITWGHAVSADLIH-WLYL-PI-AMVPDQ-WYD-INGVWTGSATILPDGQ 202 (573)
Q Consensus 132 DPNG~~y~--~--G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh-W~~l-p~-AL~Pd~-~yD-~~Gv~SGSavv~~dG~ 202 (573)
.|. ++|+ + |+|||||..+ ....|.|+|+|... |++. .. .+..+. ..+ ....+.+++++++||+
T Consensus 102 AP~-v~~~~~~g~g~yylyyt~~-------~~~i~va~s~~p~Gpw~~~~g~pli~~~~~g~~~~~~~iDp~vf~DddG~ 173 (487)
T 3c7f_A 102 APS-IAVKKINGKDKFFLYFANS-------GGGIGVLTADSPIGPWTDPIGKPLVTPSTPGMSGVVWLFDPAVFVDDDGT 173 (487)
T ss_dssp EEE-EEEEEETTEEEEEEEEEST-------TBCEEEEEESSTTCCCBCSSSSCSBCTTSTTCTTCSSBCCCEEEECTTSC
T ss_pred chh-eEEEecCCCCeEEEEEEcC-------CcEEEEEEeCCCCCCcccCCCCeEeecCCCCccCCCCccCCceEEcCCCC
Confidence 354 5665 3 7999999643 14579999999985 9974 32 232221 111 1246789998888999
Q ss_pred EEEEEcccCCC----------CcceEEEE-EecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 203 IVMLYTGSTDK----------SVQVQNLA-YPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 203 ~~~~YTG~~~~----------~~q~q~lA-~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
.+|+|.+.... ..+...+| .+.| +.+|.... ..+..| ..+-.|.+ ++ .+|+|||+
T Consensus 174 ~Yl~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~d-----~~~~~g~~--~~i~~p-----~~~Egp~i-~k-~~G~YYl~ 239 (487)
T 3c7f_A 174 GYLYAGGGVPGVSNPTQGQWANPKTARVIKLGPD-----MTSVVGSA--STIDAP-----FMFEDSGL-HK-YNGTYYYS 239 (487)
T ss_dssp EEEEEECCCSSTTSCCHHHHHCCCCEEEEEECTT-----SSSEEEEE--EEECCT-----TEEEEEEE-EE-ETTEEEEE
T ss_pred EEEEECCcccCccccccccccCCCceEEEEECCC-----eeeccCcc--EEecCC-----ceEecceE-EE-ECCEEEEE
Confidence 99999863211 11234454 3444 36776531 122221 12345777 43 68999998
Q ss_pred Eeeec--C-----CeeEEEEEEeCCCC-CcEEcccccc
Q 008224 272 IGSKI--G-----KTGISLVYQTTDFK-TYELLDEYLH 301 (573)
Q Consensus 272 vGs~~--~-----~~G~illY~S~Dl~-~W~~~~~l~~ 301 (573)
+.+.. . ....+.+++|+++. -|++.++++.
T Consensus 240 ys~~~~~t~~~~~~~~~i~~~~S~s~~GP~~~~~~il~ 277 (487)
T 3c7f_A 240 YCINFGGTHPADKPPGEIGYMTSSSPMGPFTYRGHFLK 277 (487)
T ss_dssp EEECSSSCCCTTSCTTSEEEEEESSTTCCCEEEEEEEC
T ss_pred EECCCCCCcccCCCCceeEEEEcCCCCCCceECceecc
Confidence 87642 1 12356678999876 6988766654
|
| >2x8s_A Endo-alpha-1,5-L-arabinanase; hydrolase; HET: AHR; 1.50A {Bacillus subtilis} PDB: 2x8f_A 2x8t_A 3lv4_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0046 Score=67.14 Aligned_cols=152 Identities=15% Similarity=0.114 Sum_probs=87.7
Q ss_pred cccCCcceeEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCcc-CeeecceeccCC--------CCcC---CCcEEeeeE
Q 008224 129 WMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLI-HWLYLPIAMVPD--------QWYD---INGVWTGSA 195 (573)
Q Consensus 129 WmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd--------~~yD---~~Gv~SGSa 195 (573)
-+-.|. ++++ +|+|||||..+..+. +....|+|+|+|+. .|++.+..|... ..|+ ......+++
T Consensus 98 ~~WAP~-vi~~~dGkyylyys~~~~~~--~~~~IgvatSddp~GPw~~~g~~l~~~~~~~~~dg~~~~~~~~~~~IDp~v 174 (470)
T 2x8s_A 98 TLWAAD-VTQLADGKYYMYYNACRGDS--PRSAMGVAVADNIEGPYKNKGIFLKSGMEGTSSDGTPYDATKHPNVVAPHT 174 (470)
T ss_dssp SCCCCE-EEECTTSCEEEEEEEECSSS--CCEEEEEEEESSTTCCCEEEEEEEEECCSSBCTTSSBCCTTTSCCSCCCEE
T ss_pred ceECCe-EEEecCCEEEEEEEeccCCC--CccEEEEEEeCCCCCCceeCCeeeccCcccccccccccccccCCCCCCCCE
Confidence 345665 5664 799999998764332 24578999999998 599986555431 1232 235678899
Q ss_pred EEccCCeEEEEEcccCCCCcceEEEEEe-cCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEee
Q 008224 196 TILPDGQIVMLYTGSTDKSVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~~~~q~q~lA~S-~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs 274 (573)
++++||+.+|+|.+... .+.++.- .|.+.+ ..+..+ ...+.. + .....=-|+++.++.+|+|||++++
T Consensus 175 f~DdDG~~Yl~~g~~~~----gI~~~eL~~d~~~~--~~~~~~-~~~i~~---g-~~~~~EGP~i~~~K~~G~YYL~~S~ 243 (470)
T 2x8s_A 175 FFDKDGKLWMVYGSYSG----GIFILEMNPKTGFP--LPGQGY-GKKLLG---G-NHSRIEGPYVLYNPDTQYYYLYLSY 243 (470)
T ss_dssp EECTTSCEEEEECBSTT----CEEEEEBCTTTSSB--CTTCTT-CEEEEC---C-SSCSEEEEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEeeecCC----cEEEEEECCccCcC--cCCccc-ceEecC---C-CCCceeccEEEEEccCCEEEEEEEe
Confidence 88889999999976421 2334432 222111 000000 011111 0 0011235777433468999999876
Q ss_pred ec-C--CeeEEEEEEeCCCC-CcE
Q 008224 275 KI-G--KTGISLVYQTTDFK-TYE 294 (573)
Q Consensus 275 ~~-~--~~G~illY~S~Dl~-~W~ 294 (573)
.. . ..-.+.+++|+++. -|+
T Consensus 244 g~~~~~~~y~v~~arS~s~~GP~~ 267 (470)
T 2x8s_A 244 GGLDATGGYNIRVARSKKPDGPYY 267 (470)
T ss_dssp SBSSTTSBCEEEEEEESSTTCCCB
T ss_pred CCCCCCCCceEEEEEECCCCCCCC
Confidence 42 1 12256688999865 466
|
| >2exh_A Beta-D-xylosidase; glykosidase, hydrolsase, family43, hydrolase; HET: MES; 1.88A {Geobacillus stearothermophilus} SCOP: b.29.1.23 b.67.2.1 PDB: 2exi_A* 2exj_A* 2exk_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0049 Score=67.51 Aligned_cols=154 Identities=13% Similarity=0.107 Sum_probs=90.3
Q ss_pred CcccCCcceeEECCEEEEEEeeCCC-CCCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEE
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPD-SAVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVM 205 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~-~~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 205 (573)
+-+--|. ++|++|+|+|||..... +..+....-+.|+|+|.. .|++ |..+. ...+..++++++||+.+|
T Consensus 71 ~~~WAP~-i~~~~g~~ylyyt~~~~~~g~~~~~~~~va~s~~~~Gpw~~-p~~~~-------~~~iDp~vf~DddG~~Yl 141 (535)
T 2exh_A 71 GGVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLN-------SSGFDPSLFHDEDGRKYL 141 (535)
T ss_dssp CBBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECC-------CSCSCCEEEECTTSCEEE
T ss_pred CCEECCe-EEEECCEEEEEEEeccCCCCCccccceEEEEeCCCCCCccc-cEecC-------CCcCCCceEECCCCCEEE
Confidence 3355676 78899999999985422 122334567899999976 5986 43331 124678888888999999
Q ss_pred EEcccCC--CC--cceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee
Q 008224 206 LYTGSTD--KS--VQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (573)
Q Consensus 206 ~YTG~~~--~~--~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G 280 (573)
+|..... .. ...+.++. +.|. .+-... ...|+. +.+ ..-.=-|++ ++ .+|+|||++.+.....+
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~l~~d~-----~~~~g~-~~~i~~-~~~--~~~~EgP~i-~k-~~G~YYL~~s~ggt~~~ 210 (535)
T 2exh_A 142 VNMYWDHRVDHHPFYGIVLQEYSVEQ-----KKLVGE-PKIIFK-GTD--LRITEGPHL-YK-INGYYYLLTAEGGTRYN 210 (535)
T ss_dssp EEEEECCCTTSCSEEEEEEEEEETTT-----TEEEEE-EEEEEC-CCT--TCCCEEEEE-EE-ETTEEEEEEEESCSSTT
T ss_pred EEEecCCccCCCCCCcEEEEEECCcc-----CCCCCC-cEEEEc-CCC--CCccccceE-EE-ECCEEEEEEeCCCCCCC
Confidence 9874321 11 23344443 3332 111111 122332 211 112346887 44 58999999876421112
Q ss_pred -EEEEEEeCCCC-CcEEcc--cccc
Q 008224 281 -ISLVYQTTDFK-TYELLD--EYLH 301 (573)
Q Consensus 281 -~illY~S~Dl~-~W~~~~--~l~~ 301 (573)
.+.+++|+++. -|+..+ +++.
T Consensus 211 ~~~~~~rs~s~~GP~~~~~~~pil~ 235 (535)
T 2exh_A 211 HAATIARSTSLYGPYEVHPDNPLLT 235 (535)
T ss_dssp CEEEEEEESSTTCCCEECTTCCSEE
T ss_pred eEEEEEEeCCCCCCCccCCCcceEe
Confidence 46688999976 688764 3554
|
| >3ugf_A Sucrose:(sucrose/fructan) 6-fructosyltransferase; glycoside hydrolase family 32; HET: NAG FUC BMA MAN; 1.70A {Pachysandra terminalis} PDB: 3ugg_A* 3ugh_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0067 Score=67.14 Aligned_cols=137 Identities=15% Similarity=0.220 Sum_probs=86.0
Q ss_pred EecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCC---CcceEEEEEecCCCCCCcceEEEeCCCc
Q 008224 165 VSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNP 241 (573)
Q Consensus 165 vS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nP 241 (573)
.|.+|++|.+...-+.|...+ +-....++-.+|+++|||.-+-.. +...-++|+|+| |.+|+..+ +
T Consensus 10 ~~~~~~~~~Rp~yH~~P~~gw----mNDPNG~~y~~G~YHLFYQ~nP~~~~wg~~~WGHa~S~D-----LvhW~~~p--~ 78 (546)
T 3ugf_A 10 WSNAQLSWQRTAFHFQPERSW----MSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRD-----LIHWLYLP--L 78 (546)
T ss_dssp CCHHHHHHTSCSSSCCCSSEE----EEEEEEEEEETTEEEEEEEEESSCSSSCSCEEEEEEESS-----SSSCEECC--C
T ss_pred cchhhhhhcCCeEEEeCCCCC----ccCCceeEEECCEEEEEEecCCCCCCCCCcEEEEEEcCC-----cCccccCC--C
Confidence 366889998877777776532 123333344699999999855322 235678999999 49999964 6
Q ss_pred eecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC-CeeEEEEEEeCCC-----CCcEEcc--cccccCCCC--Cceee
Q 008224 242 VLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG-KTGISLVYQTTDF-----KTYELLD--EYLHAVPGT--GMWEC 311 (573)
Q Consensus 242 Vl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~-~~G~illY~S~Dl-----~~W~~~~--~l~~~~~~~--GmWEC 311 (573)
+|.|...++....-.+.++- ..+|+++|++.+... ..-...+..|+|. .+|+..+ +++...++. .-|.-
T Consensus 79 AL~P~~~~D~~G~~SGSavv-~~dg~~~l~YTg~~~~~~q~q~lA~S~D~~d~~l~~w~K~~~nPVi~~p~g~~~~~fRD 157 (546)
T 3ugf_A 79 ALAADQWYDMQGVFSGSATC-LPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRD 157 (546)
T ss_dssp CBCSCSGGGTTCEEEEEEEE-CTTSCEEEEEEEECTTCCEEEEEEEESCTTCTTCCCEEECTTCCCBCCCTTSCTTSCCC
T ss_pred CCCCCcccccCCcCcceEEE-eeCCeEEEEEEeccCCCcEEEEEEEECCCCCCccceeEEcCCCceEeCCCCCCcceeec
Confidence 66654333333334455422 468999999876532 2234557788885 8999863 555433222 24666
Q ss_pred ec
Q 008224 312 VD 313 (573)
Q Consensus 312 Pd 313 (573)
|-
T Consensus 158 Pk 159 (546)
T 3ugf_A 158 AS 159 (546)
T ss_dssp BC
T ss_pred cc
Confidence 76
|
| >1oyg_A Levansucrase; glycoside hydrolase, beta-propeller, TR; 1.50A {Bacillus subtilis} SCOP: b.67.2.2 PDB: 1pt2_A* 3byl_A 3byn_A* 3byk_A 3byj_A 2vdt_A 3om4_A* 3om7_C* 3om6_A* 3om5_A* 3om2_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.032 Score=60.25 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=88.0
Q ss_pred ECCEEEEEEeeCCCCCCCCCcEEEEEE-----ecC---ccCeeecceeccCCC-Cc---C------------CCcEEeee
Q 008224 139 YKGWYHLFYQYNPDSAVWGNITWGHAV-----SAD---LIHWLYLPIAMVPDQ-WY---D------------INGVWTGS 194 (573)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~wG~~~WGHAv-----S~D---LVhW~~lp~AL~Pd~-~y---D------------~~Gv~SGS 194 (573)
.+|++||||.-+-... -.....++|+ |+| +..|+...+.+.++. .| + ....-..-
T Consensus 145 ~dG~i~LfYTg~~~~~-~~~q~I~~a~~~l~~~~dgv~~~~~~~~~~l~~~Dg~~Yq~~~q~~~~~~~~~~~~~~fRDP~ 223 (447)
T 1oyg_A 145 SDGKIRLFYTDFSGKH-YGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 223 (447)
T ss_dssp TTSCEEEEEEEEEGGG-TTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred cCCEEEEEEEeecCCC-CCceEEEEEecceeecCCCcceecccCCCceEcCCCccccccccccccccccCCCccccCCCe
Confidence 5899999998653221 1124457777 578 556766777788875 23 1 12344565
Q ss_pred EEEccCCeEEEEEcccCCCC-----------------------------------------cceEEEEE-ecCCCCCCcc
Q 008224 195 ATILPDGQIVMLYTGSTDKS-----------------------------------------VQVQNLAY-PADPSDPLLL 232 (573)
Q Consensus 195 avv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~-S~D~~Dp~L~ 232 (573)
++. .+|+++|++.+.+... .-.+.|++ +.| |.
T Consensus 224 Vf~-d~G~~ymvfgA~t~~~~g~~~~~~l~~w~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~G~Igl~~~s~D-----l~ 297 (447)
T 1oyg_A 224 YVE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDD-----YT 297 (447)
T ss_dssp EEE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTT-----SS
T ss_pred EEe-ECCEEEEEEeeecCCCCcccchhhhcchhhcccCcccchhhhhhcccccccccchhcCcEEEEEEcCCC-----CC
Confidence 543 5899999998876431 12455563 544 48
Q ss_pred eEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC--------CeeE-EEEEEeCCCC-CcE
Q 008224 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG--------KTGI-SLVYQTTDFK-TYE 294 (573)
Q Consensus 233 ~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~--------~~G~-illY~S~Dl~-~W~ 294 (573)
.|+-. .|++.+. ++ ...+=-|.++ + .+|+|||++..+.. ..++ ++.|.|+++. -|+
T Consensus 298 ~W~~~--~pL~~~~-~v-~d~~EcPdlf-k-~dGkyyLf~S~~~s~~~~~g~~~~~vy~~g~vsdsl~GPy~ 363 (447)
T 1oyg_A 298 LKKVM--KPLIASN-TV-TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYK 363 (447)
T ss_dssp EEEEE--EEEEECT-TT-CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCE
T ss_pred CceEc--cccccCC-CC-CCceEcCcEE-E-ECCEEEEEEecCCCcccccCcCCCcEEEEEEEcCCCCCCCe
Confidence 89875 4776542 22 1345678884 3 68999999886521 1133 4468898875 354
|
| >3pij_A Beta-fructofuranosidase; five-bladed beta-propeller and beta-sandwich domains, glycos hydrolase family 32, probiotic bacteria, fructose; HET: FRU; 1.80A {Bifidobacterium longum} PDB: 3pig_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0071 Score=66.66 Aligned_cols=151 Identities=13% Similarity=0.101 Sum_probs=87.8
Q ss_pred cccccccceeeeecCCCcccCCcce-----eE-ECCEEEEEEeeCCCC----CCCC-CcEEEEEEecCc--cCeeeccee
Q 008224 112 AMFTWQRTSFHFQPEKNWMNDPNGP-----LF-YKGWYHLFYQYNPDS----AVWG-NITWGHAVSADL--IHWLYLPIA 178 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gWmNDPNG~-----~y-~~G~YHLFYQ~nP~~----~~wG-~~~WGHAvS~DL--VhW~~lp~A 178 (573)
.+..|++-.-=+.|.. ..|.+|. +. .+|+++|||.-+-.. ...+ ...-++|+|+|. ++|+..+++
T Consensus 90 DLvhW~~~~~aL~P~~--~~d~~g~~SGSav~~~dg~~~l~YTg~~~~~~~~~~~~~~q~q~lA~S~D~gl~~w~K~~pv 167 (526)
T 3pij_A 90 DMLNWKREPIMFAPSL--EQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQMTALPDNDELTSATKQGMI 167 (526)
T ss_dssp SSSSEEECCCCBCCCB--GGGTTEEEEEEEEECTTSCEEEEEEEEEETTSSSGGGCEEEEEEEEEESSTTCSCEEEEEEE
T ss_pred CCCCceeCeeccCCCC--ccccCCeEeceEEEccCCEEEEEEecccCcccccCCCCceeEEEEEEECCCCcceEEECCcc
Confidence 4566765444455544 2466663 22 368999999855211 0111 146789999997 899988766
Q ss_pred ccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCe
Q 008224 179 MVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPT 258 (573)
Q Consensus 179 L~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~ 258 (573)
|...........-...+. ..+|+++|++.+...+..-.+.++.|+| |++|+.. .+++..+.. ....|=-|-
T Consensus 168 i~~P~~~~~~~fRDP~V~-~~~g~w~mv~ga~~~~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~-~g~mwECPd 238 (526)
T 3pij_A 168 IDCPTDKVDHHYRDPKVW-KTGDTWYMTFGVSSADKRGQMWLFSSKD-----MVRWEYE--RVLFQHPDP-DVFMLECPD 238 (526)
T ss_dssp ECCCGGGEEEEEEEEEEE-EETTEEEEEEEEEETTSCEEEEEEEESS-----SSSCEEE--EEEEECSCT-TCCEEEEEE
T ss_pred ccCCCCccccccccCEEE-EECCEEEEEEEEecCCCCcEEEEEECCC-----CCcceEc--CcccccCCC-ccCeEECCE
Confidence 632111111233455554 4789999998754433334567888988 4899986 354433211 122345566
Q ss_pred eEeecCCC-----cEEEEEeee
Q 008224 259 TAWAGPDG-----KWRLTIGSK 275 (573)
Q Consensus 259 V~w~~~dG-----~w~MvvGs~ 275 (573)
.+ . -+| +|+|+++..
T Consensus 239 lf-~-l~~~~g~~k~vL~~s~~ 258 (526)
T 3pij_A 239 FS-P-IKDKDGNEKWVIGFSAM 258 (526)
T ss_dssp EE-E-EECTTSCEEEEEEEEEE
T ss_pred EE-E-ECCCCCceeEEEEEecc
Confidence 53 2 223 889887643
|
| >2yfr_A Levansucrase, inulosucrase; fructosyltransferase, glycoside hydrolase family GH68, trans sugar utilization; 1.75A {Lactobacillus johnsonii} PDB: 2yft_A* 2yfs_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.078 Score=58.75 Aligned_cols=130 Identities=16% Similarity=0.173 Sum_probs=80.1
Q ss_pred ECCEEEEEEeeCCCCCC-CCCcEEEEEE-------ecC---ccCeeecceeccCCC-Cc-------------CCCcEEee
Q 008224 139 YKGWYHLFYQYNPDSAV-WGNITWGHAV-------SAD---LIHWLYLPIAMVPDQ-WY-------------DINGVWTG 193 (573)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~-wG~~~WGHAv-------S~D---LVhW~~lp~AL~Pd~-~y-------------D~~Gv~SG 193 (573)
.+|++||||.-+-++.. ......+.+. |+| +..|+...+.+.++. .| +....-..
T Consensus 204 ~DG~l~LFYTG~~~~~~~~~~Q~Ia~a~~~l~~~~s~dgv~~~kw~~~~~l~~~dg~~Yqt~~q~~~~~~~~~~~~FRDP 283 (571)
T 2yfr_A 204 KDGSIQLYYTKVDTSDNNTNHQKLASATVYLNLEKDQDKISIAHVDNDHIVFEGDGYHYQTYDQWKETNKGADNIAMRDA 283 (571)
T ss_dssp TTSCEEEEEEEEECTTTTCCEEEEEEEEEEEEEEGGGTEEEEEEEEEEEEEECCCSSSBCCHHHHHHHCSSCCCCCCEEE
T ss_pred cCCEEEEEEeccccCCCCcccceEEEEEeeeeecccCCCcceecccCCCceecCCCcccccccccccccccCCcccCcCC
Confidence 48999999987543321 1123344432 467 556766677777765 33 33344567
Q ss_pred eEEEccCCeEEEEEcccCCCC-----------------------------------------cceEEEEEecCCCCCCcc
Q 008224 194 SATILPDGQIVMLYTGSTDKS-----------------------------------------VQVQNLAYPADPSDPLLL 232 (573)
Q Consensus 194 Savv~~dG~~~~~YTG~~~~~-----------------------------------------~q~q~lA~S~D~~Dp~L~ 232 (573)
-++.+++|+++|++.+.+... .-.+.|+.+.|.. ..+.
T Consensus 284 ~Vf~d~dG~~YMVfgA~t~~~~~~G~~~ly~w~~yg~~~~f~~~~~~~v~~~~~~~~~a~~~~G~IgL~~s~dl~-~n~~ 362 (571)
T 2yfr_A 284 HVIDDDNGNRYLVFEASTGTENYQGDDQIYQWLNYGGTNKDNLGDFFQILSNSDIKDRAKWSNAAIGIIKLNDDV-KNPS 362 (571)
T ss_dssp EEEECTTCCEEEEEEEEBCTTSCCSGGGGGBGGGTCSCHHHHHHHHHHHHHCHHHHHHHHHCCEEEEEEEECSCT-TSCC
T ss_pred eEEEeCCCCEEEEEEeccCCCCcccchhhccccccccccccchhhhccccccccccccchhccceEEEEEcCCCc-CCcc
Confidence 766544699999998875431 2457788887642 1236
Q ss_pred eEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee
Q 008224 233 DWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK 275 (573)
Q Consensus 233 ~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~ 275 (573)
.|+-. .|++... +. ...+--|.++ + .+|+||+++.++
T Consensus 363 ~We~~--~pL~~~~-~v-~dm~EcP~lf-~-~dG~yyL~~S~q 399 (571)
T 2yfr_A 363 VAKVY--SPLISAP-MV-SDEIERPDVV-K-LGNKYYLFAATR 399 (571)
T ss_dssp EEEEC--CCSEECT-TT-BSCCEEEEEE-E-ETTEEEEEEEEE
T ss_pred cceec--cccccCC-Cc-CceeecCcEE-E-ECCEEEEEEeCC
Confidence 89854 4776542 21 2355678874 3 589999998765
|
| >3zxk_A Hiaxhd3; hydrolase, sugar binding protein; HET: XYP EPE; 1.44A {Humicola insolens} PDB: 3zxj_A* 3zxl_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.041 Score=60.73 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=38.7
Q ss_pred CCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccc
Q 008224 239 GNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 239 ~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~ 301 (573)
.||||. .++-||.|+. .++.|||+-.+- +....+.+|+|+||.+|+..+..+.
T Consensus 9 ~NPil~-------g~~~DP~iir--~~~~YY~~~st~-~~~pg~~i~~S~DLvnW~~~g~~l~ 61 (542)
T 3zxk_A 9 TNPVLW-------EDHPALEVFR--VGSVFYYSSSTF-AYSPGAPVLKSYDLVHWTPVTHSVP 61 (542)
T ss_dssp ESCSCC-------SCCCSCEEEE--ETTEEEEECCCB-TEESEEEEEEESSSSSCEEEEEEES
T ss_pred cCCccC-------CCCCCCeEEE--ECCEEEEEEecC-ccCCCeEEEEcCCCCCccccccccc
Confidence 389984 2568999953 467999985442 2222367999999999999988764
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.12 Score=54.24 Aligned_cols=133 Identities=20% Similarity=0.279 Sum_probs=77.4
Q ss_pred CeeecceeccCCCCc-CCCcEEeeeEEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCC
Q 008224 171 HWLYLPIAMVPDQWY-DINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRH 248 (573)
Q Consensus 171 hW~~lp~AL~Pd~~y-D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g 248 (573)
.|+...+ ..|...| +...+| +.++.++||++++.|+....+ ......+..|+|++ ++|++.. .|.....+
T Consensus 10 ~~~~~~i-f~~~~~~~~~~~~y-p~~v~L~dG~LLa~~~~~~~~~~~~~~~v~rS~DgG----~TW~~~~--~v~~~~~g 81 (367)
T 2ydt_A 10 TFSNVEI-FDPPTNYRDPQVLY-ARPLELSDGTLLGTWENYSPEPPNVWFPIVKSKDGG----KTWKEIS--KVKDTQNN 81 (367)
T ss_dssp CEEEEEE-ECCCTTSCTTSEEE-EEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTT----SSCEEEE--EECCCSSS
T ss_pred cccceeE-ecCCcccCCCCCCc-eeEEEcCCCCEEEEEEeccCCCCCeEEEEEEECCCC----cCcCcCc--ccCCCCCC
Confidence 3544333 3343334 445667 777778999999999876542 23445788999986 9999953 22211111
Q ss_pred CCCCCCC-CCeeEeecC-------CCcEEEEEeee-cC-CeeEEEEEEeCC-CCCcEEcccccccC---C--C-CCceee
Q 008224 249 IGPKDFR-DPTTAWAGP-------DGKWRLTIGSK-IG-KTGISLVYQTTD-FKTYELLDEYLHAV---P--G-TGMWEC 311 (573)
Q Consensus 249 ~~~~~fR-DP~V~w~~~-------dG~w~MvvGs~-~~-~~G~illY~S~D-l~~W~~~~~l~~~~---~--~-~GmWEC 311 (573)
+ ..+ +|.+ |.-+ +|+..+...+. .+ ..+.+.+|+|+| .++|+....+.... . + .++||
T Consensus 82 ~---~~~~~P~l-~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~~~i~~g~~~~~~~g~~~v~e- 156 (367)
T 2ydt_A 82 W---GLRYQPQL-YELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSHVALGGEALPNPGLTPVWE- 156 (367)
T ss_dssp S---CEEEEEEE-EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEEEEEEEESCSSCCTTCCCEEE-
T ss_pred c---ccccCCeE-EEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCCeecccCCCcccccCCCcccc-
Confidence 1 223 6665 4322 66655553322 12 245677999976 79999877654321 1 1 34888
Q ss_pred ecEEEe
Q 008224 312 VDFYPV 317 (573)
Q Consensus 312 Pd~f~l 317 (573)
| |..+
T Consensus 157 P-~~~~ 161 (367)
T 2ydt_A 157 P-FLMT 161 (367)
T ss_dssp E-EEEE
T ss_pred c-eEEC
Confidence 5 5444
|
| >1st8_A Fructan 1-exohydrolase IIA; five fold beta propeller; HET: NDG NAG MAN; 2.35A {Cichorium intybus} PDB: 2add_A* 2ade_A* 2aey_A* 2aez_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.018 Score=63.54 Aligned_cols=114 Identities=17% Similarity=0.267 Sum_probs=74.3
Q ss_pred cccccccceeeeecCCCcccCCcce-----eEE-CCEEEEEEee-CCCCCCCCCcEEEEEEecCc-----cCeeec--ce
Q 008224 112 AMFTWQRTSFHFQPEKNWMNDPNGP-----LFY-KGWYHLFYQY-NPDSAVWGNITWGHAVSADL-----IHWLYL--PI 177 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gWmNDPNG~-----~y~-~G~YHLFYQ~-nP~~~~wG~~~WGHAvS~DL-----VhW~~l--p~ 177 (573)
.+..|++..-=+.|. ++ .|.+|. +.. +|+++|||.- |.. +...-+.|+|+|. +||+.. .+
T Consensus 59 Dlv~W~~~~~aL~P~-~~-~D~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~D~~d~~l~~w~k~~~nP 132 (543)
T 1st8_A 59 DLVNWIHLDPAIYPT-QE-ADSKSCWSGSATILPGNIPAMLYTGSDSK----SRQVQDLAWPKNLSDPFLREWVKHPKNP 132 (543)
T ss_dssp SSSSEEECCCSBCCC-SG-GGTTEEEEEEEEEETTTEEEEEEEEECTT----SCEEEEEEEESCTTCTTCCCEEECTTCC
T ss_pred CccceEECCeeccCC-Cc-cccCCEEcceEEEeeCCEEEEEEEEeCCC----CcEEEEEEEECCCCCCCcceeEEcCCCc
Confidence 345665443334443 32 455553 234 8999999986 542 2456789999985 999986 35
Q ss_pred eccCCCCcCCCcEEeeeEEEc-cCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEe
Q 008224 178 AMVPDQWYDINGVWTGSATIL-PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 178 AL~Pd~~yD~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
+|.+...+.....-...++.. ++|+++|++.+..+ ..-...++.|+| |++|+..
T Consensus 133 Vi~~~~g~~~~~fRDP~vvw~~~~g~w~mv~ga~~~-~~G~i~ly~S~D-----l~~W~~~ 187 (543)
T 1st8_A 133 LITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRD-NNGMAFLYQSTD-----FVNWKRY 187 (543)
T ss_dssp SBCCCTTCCTTSEECCCCCEECTTSCEEEEEEEEET-TEEEEEEEEESS-----SSSCEEC
T ss_pred EEeCCCCCCcCccCCCeEEEECCCCcEEEEEEEecC-CceEEEEEECCC-----CCCcEEC
Confidence 666554444455667774333 68999999976542 233466888888 4899985
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.17 Score=52.77 Aligned_cols=133 Identities=18% Similarity=0.286 Sum_probs=79.0
Q ss_pred eeecceeccCCCCc-CCCcEEeeeEEEccCCeEEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCC
Q 008224 172 WLYLPIAMVPDQWY-DINGVWTGSATILPDGQIVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHI 249 (573)
Q Consensus 172 W~~lp~AL~Pd~~y-D~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~ 249 (573)
|+...+ ..|...| +...+| ..++.++||++++.|+....+ ......+..|+|++ ++|++.. .|.....+
T Consensus 6 ~~~~~i-f~~~~~~~~~~~~y-p~~v~L~dG~lLa~~~~~~~~~~~~~~~v~rS~DgG----~TW~~~~--~v~~~~~g- 76 (355)
T 3a72_A 6 LTNVTI-FSPPSDYIVPRTLY-PRNEQLPNGDLLATWENYSPEPPAVYFPIYRSKDHG----KTWNEIS--RVHDTVNG- 76 (355)
T ss_dssp EEEEEE-ECCCTTSCTTSEEE-EEEEECTTSCEEEEEEECCCSSSCCCEEEEEESSTT----SCCEEEE--EECCTTTS-
T ss_pred ceeeeE-ecCCcccCCCCCcc-ceEEEcCCCCEEEEEEeecCCCCCceEEEEEEcCCC----cCcCCCc--ccCCCcCC-
Confidence 443333 3343344 455677 677778999999988876432 23445688899986 9999963 23222212
Q ss_pred CCCCCC-CCeeEeecC-------CCcEEEEEeee-cC-CeeEEEEEEeCC-CCCcEEcccccccC---C--C-CCceeee
Q 008224 250 GPKDFR-DPTTAWAGP-------DGKWRLTIGSK-IG-KTGISLVYQTTD-FKTYELLDEYLHAV---P--G-TGMWECV 312 (573)
Q Consensus 250 ~~~~fR-DP~V~w~~~-------dG~w~MvvGs~-~~-~~G~illY~S~D-l~~W~~~~~l~~~~---~--~-~GmWECP 312 (573)
...+ +|++ |.-+ +|++.+...+. .+ ..+.+.+|+|+| .++|+....+.... . + .++|| |
T Consensus 77 --~~~~~~P~l-~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~e-P 152 (355)
T 3a72_A 77 --YGLRYQPFL-YSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWE-P 152 (355)
T ss_dssp --SCEEEEEEE-EECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEE-E
T ss_pred --cccccCCcE-EecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccCccccccCccccccCCCcccc-c
Confidence 1334 6765 5434 78877663222 12 245677899976 79999987654321 1 1 24787 4
Q ss_pred cEEEec
Q 008224 313 DFYPVA 318 (573)
Q Consensus 313 d~f~l~ 318 (573)
|..+.
T Consensus 153 -~~~~~ 157 (355)
T 3a72_A 153 -FLLAN 157 (355)
T ss_dssp -EEEEE
T ss_pred -eEEcc
Confidence 55553
|
| >2ac1_A Invertase; five fold beta propeller, hydrolase; HET: NAG MAN; 2.15A {Arabidopsis thaliana} PDB: 2xqr_A* 2oxb_A* 2qqw_A* 2qqv_A* 2qqu_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.024 Score=62.56 Aligned_cols=114 Identities=18% Similarity=0.227 Sum_probs=74.1
Q ss_pred cccccccceeeeecCCCcccCCcce-----eEE-CCEEEEEEee-CCCCCCCCCcEEEEEEecCc-----cCeeec--ce
Q 008224 112 AMFTWQRTSFHFQPEKNWMNDPNGP-----LFY-KGWYHLFYQY-NPDSAVWGNITWGHAVSADL-----IHWLYL--PI 177 (573)
Q Consensus 112 ~~~~w~Rp~yHf~P~~gWmNDPNG~-----~y~-~G~YHLFYQ~-nP~~~~wG~~~WGHAvS~DL-----VhW~~l--p~ 177 (573)
.+..|++..-=+.|.. + .|.+|. +.. +|+++|||.- +.. +...-+.|+|+|. ++|+.. .+
T Consensus 59 Dlv~W~~~~~aL~P~~-~-~D~~G~~SGsav~~~dg~~~l~YTg~~~~----~~~~q~lA~s~D~~d~~l~~w~k~~~nP 132 (541)
T 2ac1_A 59 DLINWDPHPPAIFPSA-P-FDINGCWSGSATILPNGKPVILYTGIDPK----NQQVQNIAEPKNLSDPYLREWKKSPLNP 132 (541)
T ss_dssp SSSSBEEEEEEECCCS-G-GGTTCEEEEEEEECTTSCEEEEEEEECTT----SCEEEEEEEESCTTCTTCCCEEECTTCC
T ss_pred CccceEECceeecCCC-c-cccCCEEcceEEEeeCCEEEEEEEEeCCC----CcEEEEEEEECCCCCCCceeEEecCCCc
Confidence 3566765544455543 2 455443 233 8999999986 432 2456789999985 899986 35
Q ss_pred eccCC--CCcCCCcEEeeeEEEc-cCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEe
Q 008224 178 AMVPD--QWYDINGVWTGSATIL-PDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237 (573)
Q Consensus 178 AL~Pd--~~yD~~Gv~SGSavv~-~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~ 237 (573)
+|.+. ..+.....-...++.. ++|+++|++.+... ..-...++.|+| |++|++.
T Consensus 133 Vi~~~~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~~G~i~ly~S~D-----l~~W~~~ 189 (541)
T 2ac1_A 133 LMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIH-RRGLAITYTSKD-----FLKWEKS 189 (541)
T ss_dssp SBCCCTTTCCCTTSEECCCCCEECTTSCEEEEEEEEET-TEEEEEEEEESS-----SSSCEEC
T ss_pred EEcCCCCCCCCCCceECCeEEeEeCCCeEEEEEEEecC-CceEEEEEECCC-----CCCcEEc
Confidence 66655 3344455667764333 48999999976542 233466888888 4899985
|
| >3k1u_A Beta-xylosidase, family 43 glycosyl hydrolase; structural genomics, APC20493, family 43 GL hydrolase, PSI-2; HET: MSE; 1.55A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.094 Score=53.27 Aligned_cols=117 Identities=18% Similarity=0.229 Sum_probs=68.9
Q ss_pred cCCCcccCCcceeEE-CCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeeccee-ccCCCCcCCC--cEEeeeEEEccC
Q 008224 125 PEKNWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIA-MVPDQWYDIN--GVWTGSATILPD 200 (573)
Q Consensus 125 P~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~A-L~Pd~~yD~~--Gv~SGSavv~~d 200 (573)
+..+|.=||+ ++.+ +|+|.||+.+.......+.+ |..--+.|+ .-.-.+.. ..|+..++.. .+.-|..++..+
T Consensus 131 ~~~~~~IDp~-vf~Ddd~~~~~~~~~~~~~~~~~~i-~i~~l~~~~-~~~g~~~~i~~~~~~~e~~~~~~~EGp~i~k~~ 207 (330)
T 3k1u_A 131 AWESFSLDAT-IFEHNEKLYYVWAQQDINIKGHSNI-YIAEMENPW-TLKTKPVMLTKPELEWEIKGFWVNEGPAVLKKN 207 (330)
T ss_dssp SSCSCEEEEE-EEEETTEEEEEEEECCTTSSSSBEE-EEEEEEETT-EECSCCEEEECSCSGGGCSSSCBEEEEEEEEET
T ss_pred CCCCCccCce-EEEECCccEEEEeecCCCcCCCceE-EEEECCCCc-cccCCcEEecCCCccccccCCceeeCCEEEEEC
Confidence 3345666897 5666 45777777765432222222 222224443 22222322 3455444433 456888888889
Q ss_pred CeEEEEEcccCCCCcceEEEEEecCCCCCCc-ceEEEeCCCceecC
Q 008224 201 GQIVMLYTGSTDKSVQVQNLAYPADPSDPLL-LDWVKYPGNPVLVP 245 (573)
Q Consensus 201 G~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L-~~W~K~~~nPVl~~ 245 (573)
|.++|||.+........+++|+|+...+|+. ..|++. .+||+..
T Consensus 208 G~YYL~ys~~~~~~~y~~~~~~s~~~~gP~~~~~~~~~-~~pi~~~ 252 (330)
T 3k1u_A 208 GKIFITYSASATDVNYCIGMLTAEENSNLLDKNSWTKS-QTPVFKT 252 (330)
T ss_dssp TEEEEEEEESCSSTTCEEEEEEEETTSCTTSGGGCEEC-SSCSBCC
T ss_pred CEEEEEEEeCCCCCCceEEEEEECCCCCCCCCcccccc-CCCEEEc
Confidence 9999999865433345678899988777743 458775 5788753
|
| >4ffh_A Levan fructotransferase; glycoside hydrolase; HET: SUC; 2.20A {Arthrobacter ureafaciens} PDB: 4ffi_A* 4ffg_A* 4fff_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.084 Score=57.64 Aligned_cols=118 Identities=14% Similarity=0.061 Sum_probs=72.6
Q ss_pred EEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecc-eeccCCCCcCCCc---------EEeeeEEEc-cCCeEEEEEcc
Q 008224 142 WYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLP-IAMVPDQWYDING---------VWTGSATIL-PDGQIVMLYTG 209 (573)
Q Consensus 142 ~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LVhW~~lp-~AL~Pd~~yD~~G---------v~SGSavv~-~dG~~~~~YTG 209 (573)
.++|||.-+-.. ..+...-++|+|+| +++|+..+ ++|.+....+..+ .-...++.. ++|+++|+. +
T Consensus 87 ~~~l~YTg~~~~-~~~~q~q~lA~S~D~g~~w~k~~nPvi~~p~~~~~~~~~~~~~~~~fRDP~V~~~~~~g~w~mv~-a 164 (492)
T 4ffh_A 87 AVVALATQPTDG-VRKYQEQYLYWSTDGGFTFTALPDPVIVNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVI-G 164 (492)
T ss_dssp EEEEEEEEEGGG-CGGGEEEEEEEESSSSSSCEECSSCSBCCTTTTTCCSHHHHHHHTCEEEEEEEEETTTTEEEEEE-E
T ss_pred cEEEEEeecccC-CCCcEEEEEEEeCCCCceEEEcCccccCCCCccccccccccccCCCCcCCEEEEECCCCEEEEEE-E
Confidence 599999865331 22346779999999 78999873 4454322222112 567777644 578999998 3
Q ss_pred cCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeec-C--CCcEEEEEee
Q 008224 210 STDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG-P--DGKWRLTIGS 274 (573)
Q Consensus 210 ~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~-~--dG~w~MvvGs 274 (573)
.. ..+.+..|+| |++|+.. .++... +-....|=-|-.+--. + +++|+|+++.
T Consensus 165 ~~----~~i~ly~S~D-----L~~W~~~--~~~~~~--~~~g~mwECPdlf~l~~~~~~~k~vL~~s~ 219 (492)
T 4ffh_A 165 RL----RYAAFYTSPN-----LRDWTLR--RNFDYP--NHALGGIECPDLFEITADDGTRHWVLAASM 219 (492)
T ss_dssp ET----TEEEEEEESS-----SSSCEEC--CCEECS--CGGGCCCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred CC----CeEEEEECCC-----CCCceEe--cccccc--CCccceEECCeEEEECCCCCCceEEEEEcc
Confidence 21 3567888987 5899986 344432 1111245566653111 1 2589998874
|
| >3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.29 Score=51.06 Aligned_cols=144 Identities=20% Similarity=0.277 Sum_probs=81.0
Q ss_pred eEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCC----
Q 008224 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTD---- 212 (573)
Q Consensus 137 ~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~---- 212 (573)
+..+|...++|.....+..+ ...+.|++|+|..+|...-....+ ..+... .-...++.++||+++|.|.-...
T Consensus 155 ~~~~G~l~~~~~~~~~~~~~-~~~~~~~~S~DG~TWs~~~~~~~~-~~~~~r-pg~p~v~~l~dG~l~l~y~~~~~~~~~ 231 (355)
T 3a72_A 155 LANKGKLICYYSDQRDNATY-GQTMVHQVTNDLKNWGPVVEDVTY-PTYTDR-PGMPVVTKLPNGQYFYVYEYGSFFGTE 231 (355)
T ss_dssp EEETTEEEEEEEECCCTTTC-SCEEEEEEESSSSSCCCCEEEECC-SSTTCE-EEEEEEEECTTSCEEEEEEEEBCTTSS
T ss_pred EccCCeEEEEECCCCCCCCC-CcEEEEEECCCCCCCCCCeecccc-CccCCC-CCceEEEECCCCCEEEEEEECCCcccC
Confidence 44689999999765423333 356899999999999754322222 111111 11234556789999998876432
Q ss_pred CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeec---CCCcEEEEEeeecCCeeEEEEEEeCC
Q 008224 213 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG---PDGKWRLTIGSKIGKTGISLVYQTTD 289 (573)
Q Consensus 213 ~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~---~dG~w~MvvGs~~~~~G~illY~S~D 289 (573)
........++|.|+ .+|....+.++.. +.+. ...--|++.|.. .+| .+++.+. .... ||.|+|
T Consensus 232 ~~~~~~~~~iS~DG-----~tw~~~~~~~~~~-~~~~--~~~g~p~v~~~~~gg~~g--~ll~s~~--~~~~--v~~s~~ 297 (355)
T 3a72_A 232 TYSFPLYYRLSSDP-----ENIASAPGQRLVV-SSGT--QPTSSPYAVWTPYGGENG--TIIVSSG--TQGT--LFINKA 297 (355)
T ss_dssp SCBCBEEEEEESST-----TCCTTSCCEECCB-TTCC--CCBSSCEEEEESTTSTTC--EEEEECS--SCSS--EEEESS
T ss_pred CCceeEEEEECCCc-----ccccCcCCcceec-CCCc--ccCCCCeEEECcCCCCCC--eEEEEcC--CCcE--EEEECC
Confidence 12344677889874 7886543233332 2221 234578888853 234 3333221 1122 566655
Q ss_pred -C-CCcEEcc
Q 008224 290 -F-KTYELLD 297 (573)
Q Consensus 290 -l-~~W~~~~ 297 (573)
. ..|+...
T Consensus 298 ~g~~~W~~~~ 307 (355)
T 3a72_A 298 LGEGEWTEIP 307 (355)
T ss_dssp TTCSCBEEEC
T ss_pred CCCCCCeECC
Confidence 4 7888765
|
| >2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A | Back alignment and structure |
|---|
Probab=94.99 E-value=0.43 Score=49.97 Aligned_cols=144 Identities=15% Similarity=0.243 Sum_probs=80.1
Q ss_pred eEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcC-CCcEEeeeEEEccCCeEEEEEcccCC---
Q 008224 137 LFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYD-INGVWTGSATILPDGQIVMLYTGSTD--- 212 (573)
Q Consensus 137 ~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD-~~Gv~SGSavv~~dG~~~~~YTG~~~--- 212 (573)
+..+|...++|........ ....+.|++|+|..+|...-. +.+...+. ..| -..++.++||+++|.|.-...
T Consensus 160 ~~~~G~l~v~~~d~~~~~~-~~q~l~~~~S~DG~TWs~~~~-~~~~~~~~~rpg--~p~v~~l~dG~l~~~y~~~~~~~~ 235 (367)
T 2ydt_A 160 MTYKEKLILYYSDQRDNAT-HSQKLVHQTTTDLKKWSKVVD-DTKYANYYARPG--MPTVAKLPNNEYIYVYEYGGGPNP 235 (367)
T ss_dssp EEETTEEEEEEEECCSTTT-CSSEEEEEEESSSSSCCCCEE-EECCSSTTCEEE--EEEEEECTTSCEEEEEEEETCSCC
T ss_pred ECCCCcEEEEECCCCCCCC-CCcEEEEEECCCCCCCCCcee-ccccCCcCCCCC--cceEEECCCCcEEEEEEecCCCCc
Confidence 4568999999966431122 235688999999999976432 22222121 112 133445789999998875321
Q ss_pred ----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeec---CCCcEEEEEeeecCCeeEEEEE
Q 008224 213 ----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAG---PDGKWRLTIGSKIGKTGISLVY 285 (573)
Q Consensus 213 ----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~---~dG~w~MvvGs~~~~~G~illY 285 (573)
.......+++|.|+ .+|....+.++.. +.+. ..---|++.|.. .+| .+++.+. + +. -||
T Consensus 236 ~~~~~~~~~~~~~~S~DG-----~tw~~~~~~~l~~-~~~~--~~~~sp~v~~~p~~~~~g--~l~~s~~-~--~~-~v~ 301 (367)
T 2ydt_A 236 PAGSDYWFPVYYRLSKDP-----QKFLNKAHHQIVS-NDGT--TPAGSPYVVWTPYGGKNG--TIVVSCG-T--RS-EIF 301 (367)
T ss_dssp CTTCSCCCBEEEEEESST-----TCCTTSCCEECCC-TTCC--CCBSSCEEEEESTTSTTC--EEEEECS-S--CS-CEE
T ss_pred ccccccccceEEEEcCCc-----cccCCcCCceeec-CCCc--ccCcCceEEECcCCCCCC--eEEEEcC-C--Cc-eEE
Confidence 11234567888875 7887653223322 2221 123578988962 345 3333322 1 11 267
Q ss_pred EeCCC-C--CcEEccc
Q 008224 286 QTTDF-K--TYELLDE 298 (573)
Q Consensus 286 ~S~Dl-~--~W~~~~~ 298 (573)
.|.|+ . .|+....
T Consensus 302 ~~~~~g~~~~W~~~~~ 317 (367)
T 2ydt_A 302 TNQALGDASAWKKWDV 317 (367)
T ss_dssp EESSTTCTTCCEEECC
T ss_pred EECCCCCCCcceeccC
Confidence 77664 3 6987644
|
| >1y4w_A EXO-inulinase; glycoside hydrolase FAMI crystallographic structure, native structure, hydrolase; HET: NAG; 1.55A {Aspergillus awamori} SCOP: b.29.1.19 b.67.2.3 PDB: 1y9g_A* 1y9m_A* | Back alignment and structure |
|---|
Probab=94.70 E-value=0.41 Score=52.32 Aligned_cols=115 Identities=10% Similarity=0.017 Sum_probs=69.7
Q ss_pred EEccCCeEEEEEcccCCC---CcceEEEEEecCCCCCCcceEEEeCCCceecC--CCCCCCCCCCCCeeEeecCCC----
Q 008224 196 TILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVP--PRHIGPKDFRDPTTAWAGPDG---- 266 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~--p~g~~~~~fRDP~V~w~~~dG---- 266 (573)
++-.+|+++|||.-+-.. +...-+.|+|+| |++|+..+ ++|.+ .|..+....-.+.++- ..+|
T Consensus 26 ~~~~~G~yHlfyQ~~P~~~~wg~~~WgHa~S~D-----lv~W~~~~--~al~~~g~P~~d~~g~~SGsav~-~~~~~~g~ 97 (518)
T 1y4w_A 26 LLYHNGTYHLFFQYNPGGIEWGNISWGHAISED-----LTHWEEKP--VALLARGFGSDVTEMYFSGSAVA-DVNNTSGF 97 (518)
T ss_dssp EEEETTEEEEEEEECTTCSSSCSCEEEEEEESS-----SSSCEEEE--EEECCBTTTSCCCBEEEEEEEEE-CTTCTTSC
T ss_pred ceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-----CccEEECC--ceEecCCCCCCCCCceEeeeEEE-cCCCcccc
Confidence 334699999999854221 345678999999 49999873 55511 1111222334555432 3443
Q ss_pred ------cEEEEEeeec-CC------------eeEEEEEEeCC-CCCcEEc---ccccccCCC-----CCceeeecEEEec
Q 008224 267 ------KWRLTIGSKI-GK------------TGISLVYQTTD-FKTYELL---DEYLHAVPG-----TGMWECVDFYPVA 318 (573)
Q Consensus 267 ------~w~MvvGs~~-~~------------~G~illY~S~D-l~~W~~~---~~l~~~~~~-----~GmWECPd~f~l~ 318 (573)
+++|++.+.. .. .-...+..|+| +.+|+.. .+++...+. ..-+.-|..|.-.
T Consensus 98 ~~~~~~~~~l~YTg~~~~~~~~~~~~~~~~~~q~q~lA~s~D~g~~w~k~~~~~pvi~~~~~~y~~~~~~fRDP~V~~~~ 177 (518)
T 1y4w_A 98 GKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHD 177 (518)
T ss_dssp CCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTTSSCEECTTTCCSBCSCCTTCGGGTTSEEEEEEEEET
T ss_pred ccCCCccEEEEEeeeeccccccccccccccceeEEEEEEEcCCCceEEEcCCCCCeEecCCcccccCCCCcCCCcEeEEC
Confidence 7998886542 11 12455677888 8999987 456643221 2467888888764
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.16 Score=55.81 Aligned_cols=148 Identities=18% Similarity=0.180 Sum_probs=85.5
Q ss_pred ccCCcceeEE--CCEEEEEEeeCCC-C--CCC-------C---CcEEEEEEecC-ccCeeecceeccCCCCc-CCCcEE-
Q 008224 130 MNDPNGPLFY--KGWYHLFYQYNPD-S--AVW-------G---NITWGHAVSAD-LIHWLYLPIAMVPDQWY-DINGVW- 191 (573)
Q Consensus 130 mNDPNG~~y~--~G~YHLFYQ~nP~-~--~~w-------G---~~~WGHAvS~D-LVhW~~lp~AL~Pd~~y-D~~Gv~- 191 (573)
..||. ++++ +|+-+|||-++.. + ..| . ....-..+|+| .++|.. |..|.+...- ....++
T Consensus 248 ~~nP~-lvvD~~tG~I~L~~~~~~g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G~TWs~-p~~l~~~~~~~~~~~~~~ 325 (523)
T 4fj6_A 248 VGDPS-ILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETAQLMLVKSEDDGKTWSE-PINITSQVKDPSWYFLLQ 325 (523)
T ss_dssp EEEEE-EEECTTTCCEEEEEEECCSCTTSCGGGTCCSSSSTTTSCEEEEEEESSTTSSCCC-CEECHHHHCCTTCSEEEE
T ss_pred ccCce-EEEECCCCeEEEEEEecccccccccccccccCCCCCcceEEEEEEcCCCCccCCC-CeeecccccCCcceEEec
Confidence 46776 7775 6999999887532 1 111 1 12344666765 899976 3333322100 112233
Q ss_pred -eeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE-eecCCCcEE
Q 008224 192 -TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-WAGPDGKWR 269 (573)
Q Consensus 192 -SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~-w~~~dG~w~ 269 (573)
.|+.++..||++++---+....+...-.+-+|.|.+ .+|+... ++- ....+|.++ | ++|+.+
T Consensus 326 g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G----~TW~~~~--~~~--------~~~~e~~vve~--~dG~L~ 389 (523)
T 4fj6_A 326 GPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRG----KTWHLHN--LAR--------TNTTEAQVAEV--EPGVLM 389 (523)
T ss_dssp CSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTT----SSCEECC--CSE--------ETEEEEEEEEE--ETTEEE
T ss_pred CCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCC----CeEEECC--CCC--------ccccCCEEEEe--cCCEEE
Confidence 355567789997742212222233445677898875 8999853 221 125688875 4 478887
Q ss_pred EEEeeecCCeeEEEEEEeCC-CCCcEEcc
Q 008224 270 LTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (573)
Q Consensus 270 MvvGs~~~~~G~illY~S~D-l~~W~~~~ 297 (573)
|.+-+.. .|...+|+|.| ...|+...
T Consensus 390 ~~~R~~~--~g~r~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 390 LNMRDNR--GGSRAVATTKDLGKTWTEHP 416 (523)
T ss_dssp EEEEETT--CSBCEEEEESSTTSSCEECT
T ss_pred EEEEecC--CCcEEEEEECCCCCccCcCc
Confidence 7665432 24456899977 68999753
|
| >2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A* | Back alignment and structure |
|---|
Probab=93.69 E-value=0.66 Score=48.42 Aligned_cols=137 Identities=18% Similarity=0.248 Sum_probs=77.9
Q ss_pred ccCCcceeEE-CCEEEEEEeeCCCC-----C--------------CC-CCcEEEEEEecC-ccCeeecceeccCC---CC
Q 008224 130 MNDPNGPLFY-KGWYHLFYQYNPDS-----A--------------VW-GNITWGHAVSAD-LIHWLYLPIAMVPD---QW 184 (573)
Q Consensus 130 mNDPNG~~y~-~G~YHLFYQ~nP~~-----~--------------~w-G~~~WGHAvS~D-LVhW~~lp~AL~Pd---~~ 184 (573)
..+|. ++.. +|.-+|||-+++.. . .| .........|+| .++|.. |..|.+. ..
T Consensus 102 ~~~Pt-~v~~~~g~I~l~~~~~~g~y~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~S~D~G~TWs~-p~~l~~~~~~~~ 179 (386)
T 2xzi_A 102 WGNPT-PVVDDDNTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWEGRRHLYLTESRDDGNTWSK-PVDLTKELTPDG 179 (386)
T ss_dssp EEEEE-EEECTTSCEEEEEEEECTTEESSSCCBCTTSCBCEECCSSTTTSCEEEEEEESSTTSCCCC-CEECHHHHSCTT
T ss_pred ccccE-EEEeCCCCEEEEEEeccccccccCcceeccCceecccccccccccEEEEEEECCCCccCCC-cccCcccccccc
Confidence 34565 5556 68888998654421 1 11 122344667887 899975 2222211 11
Q ss_pred cCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecC--CCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEee
Q 008224 185 YDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPAD--PSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA 262 (573)
Q Consensus 185 yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D--~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~ 262 (573)
+.....-.|+.+...||++++-.. ..+.+|.| .+ .+|+.... + . . -.+|.++ .
T Consensus 180 ~~~~~~~~g~gI~l~dGrLv~p~~---------~~~~~S~D~~~G----~tW~~~~~--~-~-~-------~~e~~vv-e 234 (386)
T 2xzi_A 180 WAWDAVGPGNGIRLTTGELVIPAM---------GRNIIGRGAPGN----RTWSVQRL--S-G-A-------GAEGTIV-Q 234 (386)
T ss_dssp CCSCCBCSSCCEECTTSCEEEEET---------TEEEEEESSTTS----CEEEEEEC--T-T-C-------CSSEEEE-E
T ss_pred ceeeccCCccEEEecCCEEEEEeE---------EEEEEccCCCCC----CcccccCc--C-C-C-------CCcCEEE-E
Confidence 211111224555667999876543 24667888 64 89997532 1 1 1 1477764 2
Q ss_pred cCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEc
Q 008224 263 GPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELL 296 (573)
Q Consensus 263 ~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~ 296 (573)
-++|+.+|+.... ..+...+|+|.| .+|+..
T Consensus 235 ~~dG~L~~~~r~~--~g~~r~v~~S~D-~tWt~~ 265 (386)
T 2xzi_A 235 TPDGKLYRNDRPS--QKGYRMVARGTL-EGFGAF 265 (386)
T ss_dssp CTTSCEEEEECCS--SSEEEEEEEEET-TEECCC
T ss_pred eCCCcEEEEEeCC--CCccEEEEEEeC-CccCcc
Confidence 2678887776432 222467999999 999854
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=92.94 E-value=3.7 Score=44.79 Aligned_cols=151 Identities=17% Similarity=0.093 Sum_probs=82.4
Q ss_pred CCEEEEEEeeCCCCC-CCCCcEEEEEEecC-ccCeeecceeccCCC-CcCCCcEEeeeEEEcc-CCeEEEEEcccCC---
Q 008224 140 KGWYHLFYQYNPDSA-VWGNITWGHAVSAD-LIHWLYLPIAMVPDQ-WYDINGVWTGSATILP-DGQIVMLYTGSTD--- 212 (573)
Q Consensus 140 ~G~YHLFYQ~nP~~~-~wG~~~WGHAvS~D-LVhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~--- 212 (573)
+|....||.-.+... ..+.+......|+| ..+|..... |..+. .-...++...+.++++ +|+++|+|.....
T Consensus 31 ~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG~TW~~~~~-l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~~~~~~ 109 (601)
T 1w8o_A 31 DGDLLASYDGRPTGIGAPGPNSILQRRSTDGGRTWGEQQV-VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGF 109 (601)
T ss_dssp TSCEEEEEEECTTSCSTTSCCEEEEEEESSTTSSCCCCEE-EECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEESSCCT
T ss_pred CCCEEEEEcccCCCCCCCCcceEEEEEeCCCCCCCCCCEE-EecCccCCCCCccccceEEEECCCCeEEEEEEeecCCCc
Confidence 466667776655533 23556667788988 579987543 33321 1123456677777664 8999999974211
Q ss_pred ----------C-CcceEEEEEecCCCCCCcceEEEeCCCceec---CCCCCCCCCCCCCeeEeecC----CCcEEEEEee
Q 008224 213 ----------K-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV---PPRHIGPKDFRDPTTAWAGP----DGKWRLTIGS 274 (573)
Q Consensus 213 ----------~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~---~p~g~~~~~fRDP~V~w~~~----dG~w~MvvGs 274 (573)
+ ......+..|.|.+ ++|.+.. ++. +.+++ ...|..|-....-. .|++++.+..
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~S~D~G----~TWs~~~---~~~~~~~~~~~-~~~~~~~g~gi~~~~~~~~G~l~~~~~~ 181 (601)
T 1w8o_A 110 AGSRPGTDPADPNVLHANVATSTDGG----LTWSHRT---ITADITPDPGW-RSRFAASGEGIQLRYGPHAGRLIQQYTI 181 (601)
T ss_dssp TTCCSCCCTTCTTSCEEEEEEESSTT----SSCEEEE---CGGGSCCSTTC-CEEEECSEECEECCSSTTTTCEEEEEEE
T ss_pred cccccCCCccCCceEEEEEEEecCCC----CCCCCcc---cccccccCCCe-eEEEecCCeEEEccCCCcCceEEEEEEE
Confidence 0 11235778899875 8999853 121 11121 11233442111112 3776654432
Q ss_pred ecCC-eeEEEEEEeCC-CCCcEEcccc
Q 008224 275 KIGK-TGISLVYQTTD-FKTYELLDEY 299 (573)
Q Consensus 275 ~~~~-~G~illY~S~D-l~~W~~~~~l 299 (573)
.... .....++.|+| .++|+....+
T Consensus 182 ~~g~~~~~~~~~~S~D~G~TW~~~~~~ 208 (601)
T 1w8o_A 182 INAAGAFQAVSVYSDDHGRTWRAGEAV 208 (601)
T ss_dssp ECTTSCEEEEEEEESSTTSSCEECCCB
T ss_pred cCCCCceeEEEEEECCCCcCccCCCCC
Confidence 2111 12344566766 7999986543
|
| >3vss_A Beta-fructofuranosidase; glycoside hydrolase family 68, beta-propeller, hydrolase; HET: FRU; 1.97A {Arthrobacter} PDB: 3vsr_A* | Back alignment and structure |
|---|
Probab=92.63 E-value=0.96 Score=49.38 Aligned_cols=149 Identities=17% Similarity=0.196 Sum_probs=85.3
Q ss_pred EECCEEEEEEeeC---CC--CCCCC--CcEEEEEE-----ecCccCee---ecceeccCCCC-cCC---C---cEEeeeE
Q 008224 138 FYKGWYHLFYQYN---PD--SAVWG--NITWGHAV-----SADLIHWL---YLPIAMVPDQW-YDI---N---GVWTGSA 195 (573)
Q Consensus 138 y~~G~YHLFYQ~n---P~--~~~wG--~~~WGHAv-----S~DLVhW~---~lp~AL~Pd~~-yD~---~---Gv~SGSa 195 (573)
..+|+++|||... .. +.... ....++|+ |.|.|+++ ..++.+.||.. |+. . ..=..-+
T Consensus 170 ~~DG~i~LFYT~v~~~~~~~g~~~~~~~Q~ia~A~~~i~~d~dgv~~~~~~~~~~l~~~DG~~Yqt~~q~~~~~fRDP~v 249 (496)
T 3vss_A 170 SKNGEIKLFFTDVAFYRNSDGTNIKPYDPRIALSVGKVKANKKGVTLTGFNKVTDLLQADGTYYQTGAQNEFFNFRDPFT 249 (496)
T ss_dssp CTTCEEEEEEEEEEECBCTTSCBSSCCEEEEEEEEEEEEEETTEEEEEEEEEEEEEECCCSSSBCCTTTCTTCCCEEEEE
T ss_pred CCCCeEEEEEEEeecccCCCccccccceeEEEEEeeeeeecCCcceEeccCCCcccccCChhhhhccccccccccCCCee
Confidence 4589999999743 11 11111 23456655 67777765 44567778763 321 1 2235555
Q ss_pred EEcc--CCeEEEEEcccCCCC----------------------------------cceEEEEEecCCCCCCcceEEEeCC
Q 008224 196 TILP--DGQIVMLYTGSTDKS----------------------------------VQVQNLAYPADPSDPLLLDWVKYPG 239 (573)
Q Consensus 196 vv~~--dG~~~~~YTG~~~~~----------------------------------~q~q~lA~S~D~~Dp~L~~W~K~~~ 239 (573)
+.++ +|..+|++.|++... .-.++||..++. .+..|+-.
T Consensus 250 f~DP~~dG~~YLVFEgnT~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~anG~IGLa~~~s~---D~~~We~~-- 324 (496)
T 3vss_A 250 FEDPAHPGETFMVFEGNSAMQRETATCNEADLGYRQGDPYAETVDDVNASGATYQIGNVGLAKAKNK---QLTEWEFL-- 324 (496)
T ss_dssp ECCTTSTTCCEEEEEEEBSSCGGGCCCCHHHHCCCTTCTTCCCHHHHHHHTGGGCEEEEEEEEESST---TSCCEEEE--
T ss_pred EecCCCCCcEEEEEecccCCcCccccccccccccccccccccccccccccccccccceEEEEEccCC---CCCccEEe--
Confidence 5543 789999998865310 123556765542 35889876
Q ss_pred CceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCee--EEEEEEeCCCC-CcEE
Q 008224 240 NPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTG--ISLVYQTTDFK-TYEL 295 (573)
Q Consensus 240 nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G--~illY~S~Dl~-~W~~ 295 (573)
.|++.... + ...+==|.++ + .+|+||++..+.. ...| .++=|.|+.|. .|+-
T Consensus 325 ~PL~~a~~-v-~deiErP~vf-~-~dGKyYLFt~s~~~t~a~~~~g~~~~yGfVSd~L~G~Y~P 384 (496)
T 3vss_A 325 PPILSANC-V-TDQTERPQIY-F-KDGKSYLFTISHRGTFAAGLDGPEGVYGFVGDGIRSDYQP 384 (496)
T ss_dssp EEEEEEET-T-BSCCEEEEEE-E-ETTEEEEEEEECSTTBCTTCCCCSEEEEEEESSSSBCCEE
T ss_pred CccccCCC-C-CCceeCCcEE-E-ECCEEEEEEecccccccccCCCCceeEEEecCCCCCCcee
Confidence 47775432 1 1344568884 3 5899999987652 1112 23346676554 4554
|
| >2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A* | Back alignment and structure |
|---|
Probab=92.02 E-value=1.5 Score=46.67 Aligned_cols=123 Identities=17% Similarity=0.255 Sum_probs=66.2
Q ss_pred EEEEecC-ccCeeecceeccCC--CCcC-CCcEEeeeEEEccC----CeEEE-EEcccCCCCcceEEEEEecCCCCCCcc
Q 008224 162 GHAVSAD-LIHWLYLPIAMVPD--QWYD-INGVWTGSATILPD----GQIVM-LYTGSTDKSVQVQNLAYPADPSDPLLL 232 (573)
Q Consensus 162 GHAvS~D-LVhW~~lp~AL~Pd--~~yD-~~Gv~SGSavv~~d----G~~~~-~YTG~~~~~~q~q~lA~S~D~~Dp~L~ 232 (573)
....|+| ..+|.. |..|.+. ..+. -.|.-.|+.+...+ |++++ .|... ..+.....+.+|.|.+ .
T Consensus 190 ~~~~S~D~G~TWs~-p~~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~-~~g~~~~~v~~S~D~G----~ 263 (449)
T 2bf6_A 190 NLVYSDDDGKTWSE-PQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTN-EKGKQSSAVIYSDDSG----K 263 (449)
T ss_dssp EEEEESSTTSSCCC-CEECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEEC-TTCCEEEEEEEESSTT----S
T ss_pred EEEEEcCCCccCCC-CccCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEc-CCCCEEEEEEEECCCC----C
Confidence 4567877 799986 2222211 1111 01222344444444 78776 44332 2223455678999875 8
Q ss_pred eEEEeCCCceecC---CCC-------C--CCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEc
Q 008224 233 DWVKYPGNPVLVP---PRH-------I--GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELL 296 (573)
Q Consensus 233 ~W~K~~~nPVl~~---p~g-------~--~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~ 296 (573)
+|+... ++... +.| + ...+..+|.++ .-++|+.+|+.... .|.+.+|+|.| ..+|+..
T Consensus 264 tW~~~~--~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vv-e~~dG~l~~~~R~~---~g~~~v~~S~D~G~TWs~~ 334 (449)
T 2bf6_A 264 NWTIGE--SPNDNRKLENGKIINSKTLSDDAPQLTECQVV-EMPNGQLKLFMRNL---SGYLNIATSFDGGATWDET 334 (449)
T ss_dssp SCEECC--CTTTTEECTTSCEECTTTCCCSTTCEEEEEEE-ECTTSCEEEEEEES---SSEEEEEEESSTTSCCCSC
T ss_pred ceeECC--ccCcccccccccccccccccccCCCCCCCEEE-EecCCEEEEEEEeC---CCCEEEEEECCCCccccCc
Confidence 999853 21110 001 0 01233566664 33678888886442 46678899987 6899853
|
| >3lig_A Fructosyltransferase; five bladed beta-propeller fold, hydrolase; 1.80A {Aspergillus japonicus} PDB: 3ldk_A* 3lem_A* 3ldr_A 3lih_A* 3lf7_A 3lfi_A* | Back alignment and structure |
|---|
Probab=91.15 E-value=1 Score=50.60 Aligned_cols=158 Identities=16% Similarity=0.096 Sum_probs=86.6
Q ss_pred cccccccc----eeeeecCCCcccCCccee-----EE--CCEEEEEEeeCCCCC-------CCCCcEEEEEEecC-ccCe
Q 008224 112 AMFTWQRT----SFHFQPEKNWMNDPNGPL-----FY--KGWYHLFYQYNPDSA-------VWGNITWGHAVSAD-LIHW 172 (573)
Q Consensus 112 ~~~~w~Rp----~yHf~P~~gWmNDPNG~~-----y~--~G~YHLFYQ~nP~~~-------~wG~~~WGHAvS~D-LVhW 172 (573)
.++.|++- .--+.|.. + .|.+|+. .. +|+++|||.-+-..+ ..+...-..|+|+| +++|
T Consensus 72 DLvhW~~~~~~~~~aL~P~~-~-~D~~G~~SGSav~~~~~g~~~~~YTg~~~~~~~~~~~~~~~~q~Q~lA~S~D~g~~w 149 (634)
T 3lig_A 72 NLATYTDTSDNGSFLIQPGG-K-NDPVAVFDGAVIPVGVNNTPTLLYTSVSFLPIHWSIPYTRGSETQSLAVARDGGRRF 149 (634)
T ss_dssp SSSCCEESCSTTCEEECSCS-S-SCSSEEEEEEEESSCGGGSCEEEEEEECSCCCCTTSCCCTTSEEEEEEEEEGGGTEE
T ss_pred CcCceeECcCCCCceecCCC-C-CCCCCcEeeEEEEECCCCEEEEEEEecccccccccCcCCCCcEEEEEEEECCCCCEE
Confidence 46678654 45566654 2 5888742 12 589999998652211 12345678899998 7899
Q ss_pred eecc--eecc-CCCCcCCCcEEeeeEEEc-----------------------------cCCeEEEEEcccCCCCcceEEE
Q 008224 173 LYLP--IAMV-PDQWYDINGVWTGSATIL-----------------------------PDGQIVMLYTGSTDKSVQVQNL 220 (573)
Q Consensus 173 ~~lp--~AL~-Pd~~yD~~Gv~SGSavv~-----------------------------~dG~~~~~YTG~~~~~~q~q~l 220 (573)
+..+ ++|. |...++....=..-++.. .+|+++|+--+...+....+.|
T Consensus 150 ~K~~~nPVi~~~p~g~~~~~fRDPkV~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ymvlg~~~~~~~g~v~l 229 (634)
T 3lig_A 150 DKLDQGPVIADHPFAVDVTAFRAPFVFRSARLDVLLSLDEEVARNETAVQQAVDGWTEKNAPWYVAVSGGVHGVGPAQFL 229 (634)
T ss_dssp EECSSSCSBCSSSTTCCEEEEEEEEEECCHHHHHHHHSCTTTTTSHHHHHHHHHTCCGGGCCCEEEEEEEETTTEEEEEE
T ss_pred EECCCCceEcCCCcccCCCccCCCeEccccCccccccccccccccccccccccccccCCCCeEEEEEEEecCCCCCEEEE
Confidence 9874 4554 222232333445555431 4688888766554433333333
Q ss_pred EE--ecCCCCCCcceEEEeCCCceecCCCCC-----------CCCCCCCCeeEeec-C-----CCcEEEEEeee
Q 008224 221 AY--PADPSDPLLLDWVKYPGNPVLVPPRHI-----------GPKDFRDPTTAWAG-P-----DGKWRLTIGSK 275 (573)
Q Consensus 221 A~--S~D~~Dp~L~~W~K~~~nPVl~~p~g~-----------~~~~fRDP~V~w~~-~-----dG~w~MvvGs~ 275 (573)
-. |.| |..|++|+-. +++...+.+. ....|--|-.+--+ + +++|+|+++..
T Consensus 230 Y~~~s~d--d~~l~~W~~~--g~l~~~~~~~~~g~~~~~~~~~G~~wECPdlf~l~~~g~~~~~~~~vl~~~~~ 299 (634)
T 3lig_A 230 YRQNGGN--ASEFQYWEYL--GEWWQEATNSSWGDEGTWAGRWGFNFETGNVLFLTEEGHDPQTGEVFVTLGTE 299 (634)
T ss_dssp EEEGGGC--TTCCSCEEEE--EEEEECCTTCCSSSSSCSSCCCCSEEEEEEEEEECSSSBCTTTSEEEEEEEEE
T ss_pred EEeCCCC--ccccCCceEe--cccccccccccccccccccCceeeEEECCCEEEECCcccCCCCCcEEEEECCC
Confidence 33 344 1236899875 4666532210 01123445442212 2 26799999864
|
| >1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ... | Back alignment and structure |
|---|
Probab=90.62 E-value=1.9 Score=48.59 Aligned_cols=150 Identities=19% Similarity=0.269 Sum_probs=82.4
Q ss_pred CcccCCcceeEECCEEEEEE-eeCCCCCC----CCCcEEEE------E-EecC-c-----cCeeecceeccCCC--CcCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFY-QYNPDSAV----WGNITWGH------A-VSAD-L-----IHWLYLPIAMVPDQ--WYDI 187 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFY-Q~nP~~~~----wG~~~WGH------A-vS~D-L-----VhW~~lp~AL~Pd~--~yD~ 187 (573)
+-..||. ++..+|.-+||+ .|+..... ++...|+. + .|+| . |+|.. |..|.+.- .+..
T Consensus 106 ~~v~~PT-tVv~gg~I~LL~g~y~~~~~~~~~~~~~~~~~llLVkG~V~~S~D~Gktsk~ItWs~-p~~L~~~~~~~~~~ 183 (648)
T 1ms9_A 106 SRVVDPT-VIVKGNKLYVLVGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGS-PVSLKEFFPAEMEG 183 (648)
T ss_dssp CEEEEEE-EEEETTEEEEEEEEESSCCSCGGGCSSSTTEEEEEEEEEEEEECGGGSCEEEEEECC-CEECGGGCCSBSSS
T ss_pred eEeeccc-eeeecccEEEEEEeecCCcccccccccCCCcceEEEEeeeccccccccccceeeccC-cccCcccccccccc
Confidence 3456787 556788888887 55543221 22334554 2 3665 3 57975 33343321 1111
Q ss_pred ---CcEE--eeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeE-e
Q 008224 188 ---NGVW--TGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTA-W 261 (573)
Q Consensus 188 ---~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~-w 261 (573)
.+.. .|+.++..||++++=--+....+..+-.+-+|+|.+ .+|+.... + + .....||.|+ |
T Consensus 184 ~~~~~~~~GgGsGI~m~dGtLVfPv~~~~~~g~~~s~iiySdD~G----~TW~ls~~--~--~-----~~gc~EpsVvEw 250 (648)
T 1ms9_A 184 MHTNQFLGGAGVAIVASNGNLVYPVQVTNKKKQVFSKIFYSEDEG----KTWKFGKG--R--S-----AFGCSEPVALEW 250 (648)
T ss_dssp SBEEEEEECSEECEECTTSCEEEEEEEEETTCCEEEEEEEESSTT----SSCEECSC--C--C-----CTTEEEEEEEEE
T ss_pred ceeEEEEecCCceEEecCCcEEEEEEEEcccccceeeEEEecCCC----CCEEECCC--C--C-----CCCccceEEEEE
Confidence 1111 355567789998752211112223334566888865 89998632 1 1 1346799975 5
Q ss_pred ecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEccc
Q 008224 262 AGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLDE 298 (573)
Q Consensus 262 ~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~~~ 298 (573)
+|+-+|..... .|...+|+|.| ...|+....
T Consensus 251 ---dG~Lmm~~R~~---~g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 251 ---EGKLIINTRVD---YRRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp ---TTEEEEEEEET---TSCCCEEEESSTTSSCEECTT
T ss_pred ---CCEEEEEEEcc---CCcEEEEEecCCCcccccccc
Confidence 58754444332 24445899988 689987544
|
| >2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A* | Back alignment and structure |
|---|
Probab=90.47 E-value=0.8 Score=49.26 Aligned_cols=123 Identities=21% Similarity=0.218 Sum_probs=67.7
Q ss_pred EEEecC-ccCeeecceeccCCCCcCCCcE---EeeeEEEccC----CeEEE-EEcccCC---CCcceEEEEEecCCCCCC
Q 008224 163 HAVSAD-LIHWLYLPIAMVPDQWYDINGV---WTGSATILPD----GQIVM-LYTGSTD---KSVQVQNLAYPADPSDPL 230 (573)
Q Consensus 163 HAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv---~SGSavv~~d----G~~~~-~YTG~~~---~~~q~q~lA~S~D~~Dp~ 230 (573)
...|+| .++|.. |..|.+...-+.... -.|+.++..+ |++++ +|+.... .+.....+.+|.|.+
T Consensus 218 ~~~S~D~G~TWs~-p~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G--- 293 (471)
T 2w20_A 218 MSYSDDDGKTWSA-PQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHG--- 293 (471)
T ss_dssp EEEESSTTSSCCC-CEECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTT---
T ss_pred EEEECCCcCcCCC-CcccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCC---
Confidence 467877 899985 333332110011111 1234455556 88776 4543211 122456788999975
Q ss_pred cceEEEeCCCceecCC--CCC-------C--CCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEc
Q 008224 231 LLDWVKYPGNPVLVPP--RHI-------G--PKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELL 296 (573)
Q Consensus 231 L~~W~K~~~nPVl~~p--~g~-------~--~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~ 296 (573)
++|+... ++-... .+. + .....+|.++ .-++|+.+|+... ..|.+.+|+|.| ...|+..
T Consensus 294 -~TW~~~~--~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vv-e~~dG~L~~~~R~---~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 294 -KTWHAGE--AVNDNRQVDGQKIHSSTMNNRRAQNTESTVV-QLNNGDVKLFMRG---LTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp -SSCEECC--CTTTTEEETTEEECTTTCCCGGGCCCSEEEE-ECTTSCEEEEECC---SSSEEEEEEESSSSSSCCSC
T ss_pred -CCcccCC--ccCcccccCccccccccccccCcCccCCEEE-EcCCCeEEEEEEe---CCCCEEEEEEcCCCcCCCCc
Confidence 8999853 221110 110 0 0124688874 3368988887643 246677899988 6899854
|
| >3kf3_A Invertase; GH32, glycoprotein, glycosidase, hydrolase; HET: FRU NAG; 1.90A {Schwanniomyces occidentalis} PDB: 3kf5_A* 3u75_A* 3u14_A* | Back alignment and structure |
|---|
Probab=89.51 E-value=3 Score=45.58 Aligned_cols=108 Identities=8% Similarity=0.069 Sum_probs=62.6
Q ss_pred CCeEEEEEcccCCC---C-cceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEee------------c
Q 008224 200 DGQIVMLYTGSTDK---S-VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWA------------G 263 (573)
Q Consensus 200 dG~~~~~YTG~~~~---~-~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~------------~ 263 (573)
+|+++|||.-+-.. + ...-+.|+|+| |.+|+..+ ++|.|.. +....-...++-. .
T Consensus 34 ~G~YHlFYQ~nP~~~~wg~~~~WGHa~S~D-----LvhW~~~~--~aL~P~~--d~~G~~SGSav~d~~~t~g~~~~~~~ 104 (509)
T 3kf3_A 34 AKLWHLYFQYNPNATAWGQPLYWGHATSND-----LVHWDEHE--IAIGPEH--DNEGIFSGSIVVDHNNTSGFFNSSID 104 (509)
T ss_dssp TTEEEEEEEEETTCSSCCSSBEEEEEEESS-----SSSCEECS--CCBCCSS--TTCEEEEEEEEECTTCTTSCCCTTSC
T ss_pred CCEEEEEEecCCCCCCCCCcCEEEEEEccC-----CCCcEECc--ccccccc--cCCCEEeceEEEeCCccccccccccC
Confidence 69999999754221 2 24568999999 49999863 5665432 1111112222111 0
Q ss_pred CCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEcc--cccccCCCCCceeeecEEEec
Q 008224 264 PDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLD--EYLHAVPGTGMWECVDFYPVA 318 (573)
Q Consensus 264 ~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~~--~l~~~~~~~GmWECPd~f~l~ 318 (573)
++|+++|++.+.....-...+..|+| ..+|+..+ +++.. ...-+.-|-.|.-.
T Consensus 105 p~~~l~~~YTg~~~~~q~q~lA~S~D~g~~~~k~~~nPVi~~--~~~~fRDPkVfw~~ 160 (509)
T 3kf3_A 105 PNQRIVAIYTNNIPDNQTQDIAFSLDGGYTFTKYENNPVIDV--SSNQFRDPKVFWHE 160 (509)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEESSSSSSCEECTTCCSBCC--SCSSCEEEEEEEET
T ss_pred CCCceEEEECCCCCCCeeEEEEEECCCCcceEEcCCCceEcC--CCCcccCCeEEEEC
Confidence 23578888765433333455677888 78999853 44432 23356777777653
|
| >2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A* | Back alignment and structure |
|---|
Probab=89.47 E-value=3.2 Score=46.96 Aligned_cols=116 Identities=15% Similarity=0.134 Sum_probs=67.2
Q ss_pred EEEEecC-ccCeeecceeccCCCCcCCCcEEe--eeEEEccC----CeEEE-EEcccCCCCcceEEEEEecCCCCCCcce
Q 008224 162 GHAVSAD-LIHWLYLPIAMVPDQWYDINGVWT--GSATILPD----GQIVM-LYTGSTDKSVQVQNLAYPADPSDPLLLD 233 (573)
Q Consensus 162 GHAvS~D-LVhW~~lp~AL~Pd~~yD~~Gv~S--GSavv~~d----G~~~~-~YTG~~~~~~q~q~lA~S~D~~Dp~L~~ 233 (573)
-...|+| ..+|.... .|.+...-.....+. |+.+...+ |++++ .|+... ..-.+.+|.|.+ ++
T Consensus 429 ~v~~S~DgG~TWs~p~-~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~----~~s~i~~SdDgG----~T 499 (679)
T 2sli_A 429 AMRYSDDEGASWSDLD-IVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSS----AELGFMYSDDHG----DN 499 (679)
T ss_dssp EEEEESSTTSSCCCCE-ECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESS----CSEEEEEESSTT----SS
T ss_pred EEEEeCCCCccCCCCc-ccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCC----CEEEEEEECCCC----Cc
Confidence 3456776 78998643 333211101122222 34445555 88776 444321 234577899975 89
Q ss_pred EEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCC-CCCcEEcc
Q 008224 234 WVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTD-FKTYELLD 297 (573)
Q Consensus 234 W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~D-l~~W~~~~ 297 (573)
|++... +. |.+ ....+|.++ ...+|+.+|+.... .|.+.+|+|.| ...|+...
T Consensus 500 W~~~~~--~~--p~~---~~~~e~~vv-e~~dG~L~~~~R~~---~G~~~v~~S~DgG~TWt~~~ 553 (679)
T 2sli_A 500 WTYVEA--DN--LTG---GATAEAQIV-EMPDGSLKTYLRTG---SNCIAEVTSIDGGETWSDRV 553 (679)
T ss_dssp CEEEEC--CC--CCS---CCCCCEEEE-ECTTSCEEEEECCS---SSSCEEEEESSTTSSCCCCE
T ss_pred eEeCcc--CC--CCC---CCccceEEE-EeCCCEEEEEEEeC---CCCEEEEEEcCCCcCCCCCc
Confidence 998642 11 212 355788874 33678888876432 35567899988 68998654
|
| >4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Probab=89.46 E-value=5.6 Score=43.54 Aligned_cols=152 Identities=17% Similarity=0.087 Sum_probs=82.5
Q ss_pred CCEEEEEEeeCCCCC-CC-CCcEEEEEEecC-ccCeeecceeccCCC----CcCCCcEEeeeEEEcc-CCeEEEEEcccC
Q 008224 140 KGWYHLFYQYNPDSA-VW-GNITWGHAVSAD-LIHWLYLPIAMVPDQ----WYDINGVWTGSATILP-DGQIVMLYTGST 211 (573)
Q Consensus 140 ~G~YHLFYQ~nP~~~-~w-G~~~WGHAvS~D-LVhW~~lp~AL~Pd~----~yD~~Gv~SGSavv~~-dG~~~~~YTG~~ 211 (573)
+|....||-..+.+. .+ +++......|+| ..+|.....++...+ .-..++++.++.++++ +|++++||+...
T Consensus 191 ~G~Lla~~~~r~~~~~D~~~~i~i~~~rS~DgG~tWs~~~~v~~~~~~~~~~~~~~~~~nP~lvvD~~tG~I~L~~~~~~ 270 (523)
T 4fj6_A 191 NGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQTWEPMRVAMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWTH 270 (523)
T ss_dssp TSCEEEEEEEESSCSCCSSSSEEEEEEEESSTTSSCCCCEEEECCTTGGGCCGGGSCEEEEEEEECTTTCCEEEEEEECC
T ss_pred CCcEEEEEeceeccCCCCcCcEEEEEEEeCCCCCEeCCcEEeecccccccCccccccccCceEEEECCCCeEEEEEEecc
Confidence 677777775544332 22 566666788888 579986544333221 1124689999998875 799999987421
Q ss_pred C----------------CCcceEEEEEecCCCCCCcceEEEeCCCceec--CCCCCCCCCC-CCCeeEeecCCCcEEEEE
Q 008224 212 D----------------KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV--PPRHIGPKDF-RDPTTAWAGPDGKWRLTI 272 (573)
Q Consensus 212 ~----------------~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~--~p~g~~~~~f-RDP~V~w~~~dG~w~Mvv 272 (573)
. ......++..|.|.+ ++|.+.. .+.. ..+.+ ..| .-|--.-.-.+|++++-+
T Consensus 271 g~~~~~~w~~~~~g~~~~~t~~~~~~~S~D~G----~TWs~p~--~l~~~~~~~~~--~~~~~g~G~GI~l~dGrLv~P~ 342 (523)
T 4fj6_A 271 GMGNERAWWNSMPGMTPDETAQLMLVKSEDDG----KTWSEPI--NITSQVKDPSW--YFLLQGPGRGITMQDGTLVFPI 342 (523)
T ss_dssp SCTTSCGGGTCCSSSSTTTSCEEEEEEESSTT----SSCCCCE--ECHHHHCCTTC--SEEEECSEECEECTTSCEEEEE
T ss_pred cccccccccccccCCCCCcceEEEEEEcCCCC----ccCCCCe--eecccccCCcc--eEEecCCCcceEEeCCeEEEEE
Confidence 0 011245688899875 8997631 1111 11111 111 122100012578877555
Q ss_pred eeec-CCeeEEEEEEeC-CCCCcEEcccc
Q 008224 273 GSKI-GKTGISLVYQTT-DFKTYELLDEY 299 (573)
Q Consensus 273 Gs~~-~~~G~illY~S~-Dl~~W~~~~~l 299 (573)
-... ++....+++.|+ +.++|+.....
T Consensus 343 ~~~~~~g~~~s~i~~S~D~G~TW~~~~~~ 371 (523)
T 4fj6_A 343 QFIDATRVPNAGIMYSKDRGKTWHLHNLA 371 (523)
T ss_dssp EEECTTSCEEEEEEEESSTTSSCEECCCS
T ss_pred EEEcCCCCEEEEEEEECCCCCeEEECCCC
Confidence 4332 222233344455 47999986543
|
| >3sc7_X Inulinase; glycoside hydrolase family 32, glycosylation cytosol, hydrolase; HET: MAN NAG EPE; 1.50A {Aspergillus ficuum} PDB: 3rwk_X* | Back alignment and structure |
|---|
Probab=88.22 E-value=1.8 Score=47.44 Aligned_cols=122 Identities=13% Similarity=0.130 Sum_probs=71.7
Q ss_pred EEEEEEeeCCCCCCCCCcEEEEEEecC-ccCeeecc--eeccCCC--CcCCC---cEEeeeEEEc-cCCeEEEEEcccCC
Q 008224 142 WYHLFYQYNPDSAVWGNITWGHAVSAD-LIHWLYLP--IAMVPDQ--WYDIN---GVWTGSATIL-PDGQIVMLYTGSTD 212 (573)
Q Consensus 142 ~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LVhW~~lp--~AL~Pd~--~yD~~---Gv~SGSavv~-~dG~~~~~YTG~~~ 212 (573)
.++|||.-+... .+...-++|+|+| .++|+..+ ++|.+.. ..+.. ..-...++.. ++|+++|++....
T Consensus 120 ~l~l~YTg~~~~--~~~q~q~lA~s~D~g~~w~k~~~nPVi~~~~~~~~~~~~~~~fRDPkV~~~~~~g~w~mv~g~~~- 196 (516)
T 3sc7_X 120 PYLAWFTGYTTS--SQTQDQRLAFSVDNGATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLAHGG- 196 (516)
T ss_dssp CEEEEEEEEETT--TTEEEEEEEEESSTTSCCEECTTCCSBCHHHHTTTCTTSSSSCEEEEEEEETTTTEEEEEEECBT-
T ss_pred eEEEEEeeeeCC--CCceEEEEEEecCCCceEEEcCCCceEcCCCcccccccCCCcccCCeEEEECCCCeEEEEEEECC-
Confidence 599999876432 1235678999999 48999864 4454321 11211 2356676543 4688999875321
Q ss_pred CCcceEEEEEecCCCCCCcceEEEeCCCceecCC-CCC--CCCCCCCCeeEeec----CCCcEEEEEeee
Q 008224 213 KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP-RHI--GPKDFRDPTTAWAG----PDGKWRLTIGSK 275 (573)
Q Consensus 213 ~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p-~g~--~~~~fRDP~V~w~~----~dG~w~MvvGs~ 275 (573)
...+.+..|+| |++|+.. .++.... .|+ ....|=-|-.+--. .+++|+|+++..
T Consensus 197 --~~~i~ly~S~D-----L~~W~~~--~~l~~~~~~g~~~~~~mwECPdlf~l~~~g~~~~k~VL~~s~~ 257 (516)
T 3sc7_X 197 --QDKLSFWTSAD-----TINWTWQ--SDLKSTSINGLSSDITGWEVPDMFELPVEGTEETTWVVMMTPA 257 (516)
T ss_dssp --TCEEEEEEESS-----SSSCEEE--EEEEGGGSTTCCTTCCCBCCCEEEEEECSSSSCEEEEEEECCS
T ss_pred --CCEEEEEECCC-----CCCceEc--ccccccCCCCcccccceEECCcEEEecccCCCCceEEEEECCC
Confidence 23467888887 5899986 3444321 121 11246677763211 135899998753
|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
Probab=87.01 E-value=2 Score=46.94 Aligned_cols=100 Identities=18% Similarity=0.124 Sum_probs=62.7
Q ss_pred EeeeEEEccCCeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCC-CCCCCCCCCCeeEeecCC
Q 008224 191 WTGSATILPDGQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPR-HIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 191 ~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~-g~~~~~fRDP~V~w~~~d 265 (573)
-..+.+..++|.++++|.+.... +.-.+.+..|.|++ ++|.+. .++.... ......+.||.++....+
T Consensus 22 ~~P~L~~~~~G~lla~~~~~~~~~~~~~~~~i~~~rS~DgG----~TW~~~---~~l~~~~~~~~~~~~~~P~~~~d~~~ 94 (601)
T 1w8o_A 22 RIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ---QVVSAGQTTAPIKGFSDPSYLVDRET 94 (601)
T ss_dssp EEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC---EEEECCBCSSSCBEEEEEEEEECTTT
T ss_pred eEeeEEECCCCCEEEEEcccCCCCCCCCcceEEEEEeCCCC----CCCCCC---EEEecCccCCCCCccccceEEEECCC
Confidence 35666666799999999986542 12246788999975 899864 2332211 111234678987544357
Q ss_pred CcEEEEEeeecC---------------CeeEEEEEEeCC-CCCcEEcc
Q 008224 266 GKWRLTIGSKIG---------------KTGISLVYQTTD-FKTYELLD 297 (573)
Q Consensus 266 G~w~MvvGs~~~---------------~~G~illY~S~D-l~~W~~~~ 297 (573)
|+.+|+++.... ....+.+++|+| .+.|+...
T Consensus 95 g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D~G~TWs~~~ 142 (601)
T 1w8o_A 95 GTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRT 142 (601)
T ss_dssp CCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEE
T ss_pred CeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecCCCCCCCCcc
Confidence 888888764211 112456778866 78998754
|
| >1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A* | Back alignment and structure |
|---|
Probab=81.27 E-value=3.7 Score=42.15 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=60.0
Q ss_pred EE-eeeEE-EccCCeEEEEEcccCCC---CcceEEEEEecCCCCCCcc----eEEEeCCCceecCCCCCCCCCCCCCeeE
Q 008224 190 VW-TGSAT-ILPDGQIVMLYTGSTDK---SVQVQNLAYPADPSDPLLL----DWVKYPGNPVLVPPRHIGPKDFRDPTTA 260 (573)
Q Consensus 190 v~-SGSav-v~~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~Dp~L~----~W~K~~~nPVl~~p~g~~~~~fRDP~V~ 260 (573)
+| .++.+ +.++|.+++++.+.... ....+.+..|+|.+ + +|.+. .++... ......+++|.++
T Consensus 21 s~riP~Lv~~~~~G~l~a~~e~~~~~~~~~~~~i~~~rS~D~G----~~~~~tW~~~---~~~~~~-~~~~~~~~~P~~v 92 (382)
T 1so7_A 21 AYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA----PTHQVQWQAQ---EVVAQA-RLDGHRSMNPCPL 92 (382)
T ss_dssp CEEEEEEEEETTTTEEEEEEEECC-------CEEEEEEEEEEG----GGTEEEECCC---EECTTS-CCTTEEEEEEEEE
T ss_pred EEEeCeEEEECCCCeEEEEEccCcCCCCCCCCEEEEEEeeeCC----ccccceeCCc---EEeccC-CCCCCccccceEE
Confidence 45 46665 56799999999886431 11225677888864 7 99853 222221 1112347799875
Q ss_pred eecCCCcEEEEEeeecC------------CeeEEEEEEeCC-CCCcEEccc
Q 008224 261 WAGPDGKWRLTIGSKIG------------KTGISLVYQTTD-FKTYELLDE 298 (573)
Q Consensus 261 w~~~dG~w~MvvGs~~~------------~~G~illY~S~D-l~~W~~~~~ 298 (573)
....+|+-+|+++.... ....+.+++|+| .++|+....
T Consensus 93 ~d~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~DgG~TW~~~~~ 143 (382)
T 1so7_A 93 YDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRD 143 (382)
T ss_dssp ECTTTCCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESSTTSSCCCCEE
T ss_pred EECCCCcEEEEEEEecCCCccceeecCCCCccEEEEEEEcCCCCcCCCCcc
Confidence 54446888887764311 123466888876 789986433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 573 | ||||
| d1y4wa2 | 353 | b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awa | 5e-91 | |
| d1uypa2 | 294 | b.67.2.3 (A:1-294) Beta-fructosidase (invertase), | 5e-77 | |
| d1oyga_ | 440 | b.67.2.2 (A:) Levansucrase {Bacillus subtilis [Tax | 1e-43 | |
| d1jfua_ | 176 | c.47.1.10 (A:) Membrane-anchored thioredoxin-like | 0.002 | |
| d1vkda_ | 327 | b.67.2.4 (A:) Hypothetical protein TM1225 {Thermot | 0.004 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} Length = 353 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Score = 282 bits (721), Expect = 5e-91
Identities = 93/359 (25%), Positives = 147/359 (40%), Gaps = 50/359 (13%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
R +HF P+KNWMNDPNG L++ G YHLF+QYNP WGNI+WGHA+S DL HW P+
Sbjct: 8 RGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPV 67
Query: 178 AMVPDQWYDI--NGVWTGSATILPDG----------QIVMLYTG------------STDK 213
A++ + ++GSA + +V +YT + +
Sbjct: 68 ALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQE 127
Query: 214 SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPP---RHIGPKDFRDPTTAWAGPDGKWRL 270
Q Q++AY D L NPV+ P ++FRDP W KW +
Sbjct: 128 DQQSQSIAY---SLDDGLTWTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQKWVV 184
Query: 271 TIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSAT 330
I + +Y + + K ++L+ E+ G+WEC + ++
Sbjct: 185 VTS--IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS--------- 233
Query: 331 GPGIKHVLKASLDDTKV-------DHYAIGTYNPANDKWTPDNPEEDVGIGLKWDYGR-Y 382
G K V+ + L+ Y +G ++ D D+G +
Sbjct: 234 GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGTTFTPDADTVYPGNSTANWMDWGPDF 293
Query: 383 YASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTV-LYDNKTGSNVVQWP 440
YA+ + + GW+N ++ W S IPR + L + + +VQ P
Sbjct: 294 YAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 294 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Score = 243 bits (621), Expect = 5e-77
Identities = 100/327 (30%), Positives = 152/327 (46%), Gaps = 39/327 (11%)
Query: 118 RTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPI 177
+ ++HF P WMNDPNG +F+KG YH+FYQYNP WGNI WGHAVS DL+HW +LP+
Sbjct: 3 KPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPV 62
Query: 178 AMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKY 237
A+ + +GV++GSA DG++ ++YT D + LD+VKY
Sbjct: 63 ALY--PDDETHGVFSGSAVE-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKY 119
Query: 238 PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGISLVYQTTDFKTYELL 296
GNPV+ P G FRDP +G+WR+ +GS K G L+Y + D ++
Sbjct: 120 DGNPVISKPPEEGTHAFRDPKVNR--SNGEWRMVLGSGKDEKIGRVLLYTSDDLFHWKYE 177
Query: 297 DEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTYN 356
+ T EC D + G K +L S+ T +++G
Sbjct: 178 GA-IFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSMGEL- 220
Query: 357 PANDKWTPDNPEEDVGIGLKWDYGR-YYASKSFYDPYKKRRIVWGWINETDTES--DDLE 413
+ +V D+G +YA+++F+ R +V GW+
Sbjct: 221 --------KEGKLNVEKRGLLDHGTDFYAAQTFFGT--DRVVVIGWLQSWLRTGLYPTKR 270
Query: 414 KGWASVQTIPRTVLYDNKTGSNVVQWP 440
+GW V ++PR + +N + P
Sbjct: 271 EGWNGVMSLPRELYVENNE---LKVKP 294
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} Length = 440 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Score = 159 bits (402), Expect = 1e-43
Identities = 44/391 (11%), Positives = 101/391 (25%), Gaps = 90/391 (23%)
Query: 130 MNDPNG-PLFYKGWYHLFYQYNPDSAVWGN---ITWGHAVSADLIHWLYLPIAMVPDQWY 185
+ + +G Y G++ +F + + + W +
Sbjct: 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKF 116
Query: 186 DINGV--------WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADP--SDPLLLDWV 235
D N W+GSAT DG+I + YT + K Q L + L+
Sbjct: 117 DANDSILKDQTQEWSGSATFTSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNIN 176
Query: 236 KYPGNPVLVPPR-----------------HIGPKDFRDP------TTAWAGPDGKWRLTI 272
+ RDP + +
Sbjct: 177 GVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHYVEDKGHKYLVFEANTGTED 236
Query: 273 GSK-----------------------------------IGKTGISLVYQTTDFKTYELLD 297
G + + + ++ D+ +++
Sbjct: 237 GYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKVMK 296
Query: 298 EYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHYAIGTY-- 355
+ + T E + + + NG L T K ++D + + Y
Sbjct: 297 PLIASNTVTDEIERANVFKM--NGKWYLFTD------SRGSKMTIDGITSNDIYMLGYVS 348
Query: 356 NPANDKWTPDNPEE-DVGIGLKWDYGRY-YASKSFYDPYKKRRIVWGWINETDTESDDLE 413
N + P N + + L + + Y+ + ++ ++ D +
Sbjct: 349 NSLTGPYKPLNKTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRG-FYADKQ 407
Query: 414 KGWA-----SVQTIPRTVLYDNKTGSNVVQW 439
+A +++ +V+ D+ +
Sbjct: 408 STFAPSFLLNIKGKKTSVVKDSILEQGQLTV 438
|
| >d1jfua_ c.47.1.10 (A:) Membrane-anchored thioredoxin-like protein TlpA, soluble domain {Bradyrhizobium japonicum [TaxId: 375]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thioredoxin fold superfamily: Thioredoxin-like family: Glutathione peroxidase-like domain: Membrane-anchored thioredoxin-like protein TlpA, soluble domain species: Bradyrhizobium japonicum [TaxId: 375]
Score = 37.3 bits (85), Expect = 0.002
Identities = 14/121 (11%), Positives = 29/121 (23%), Gaps = 6/121 (4%)
Query: 96 NSHLLRNIKGSYNWTNAMFTWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAV 155
L + +G N TW P + + ++ +P+
Sbjct: 47 KPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPK 106
Query: 156 WGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATIL--PDGQIVMLYTGSTDK 213
+ + A V I ++L P G + G +
Sbjct: 107 TFLKEANL----TRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEW 162
Query: 214 S 214
+
Sbjct: 163 A 163
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} Length = 327 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Score = 37.3 bits (86), Expect = 0.004
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 12/120 (10%)
Query: 135 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP----IAMVPDQWYDINGV 190
+ Y G + ++ + S D I+W P V + + +
Sbjct: 49 AVVPYNGEFVGVFRID---HKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYA 105
Query: 191 WTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLD--WVKYPGNPVLVPPRH 248
+ + D + T ++ + D + L +V + N VL P +
Sbjct: 106 YDPRVVKIEDTYYITFCTDDHGPTIG---VGMTKDFKTFVRLPNAYVPFNRNGVLFPRKI 162
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 573 | |||
| d1y4wa2 | 353 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 100.0 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 100.0 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 99.97 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.68 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 99.58 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 99.44 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 99.37 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 99.16 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 99.09 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 99.06 | |
| d1vkda_ | 327 | Hypothetical protein TM1225 {Thermotoga maritima [ | 99.02 | |
| d1uv4a1 | 291 | Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 14 | 98.07 | |
| d1uypa2 | 294 | Beta-fructosidase (invertase), N-terminal domain { | 97.57 | |
| d1gyha_ | 318 | alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: | 97.46 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 97.22 | |
| d2exha2 | 322 | Beta-D-xylosidase N-terminal domain {Geobacillus s | 96.55 | |
| d1wl7a1 | 312 | Arabinanase-TS {Bacillus thermodenitrificans [TaxI | 96.5 | |
| d1y7ba2 | 321 | Beta-D-xylosidase N-terminal domain {Clostridium a | 96.16 | |
| d1yrza2 | 317 | Beta-D-xylosidase N-terminal domain {Bacillus halo | 96.07 | |
| d1y4wa1 | 164 | Exo-inulinase {Aspergillus awamori [TaxId: 105351] | 95.15 | |
| d1oyga_ | 440 | Levansucrase {Bacillus subtilis [TaxId: 1423]} | 94.33 | |
| d1w8oa3 | 356 | Micromonospora sialidase, N-terminal domain {Micro | 91.05 | |
| d2b4wa1 | 310 | Hypothetical protein LmjF10.1260 {Leishmania major | 81.17 | |
| d3sila_ | 379 | Salmonella sialidase {Salmonella typhimurium, stra | 80.15 |
| >d1y4wa2 b.67.2.3 (A:20-372) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=100.00 E-value=1.6e-78 Score=635.75 Aligned_cols=309 Identities=31% Similarity=0.625 Sum_probs=252.1
Q ss_pred ccccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-cC-CCcEEe
Q 008224 115 TWQRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-YD-INGVWT 192 (573)
Q Consensus 115 ~w~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~-yD-~~Gv~S 192 (573)
+-+||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||||+|||||+++|+||.|+.. .| .+||||
T Consensus 5 ~p~Rp~~H~~p~~gwlNDPnGl~y~~G~yHlFyQ~nP~~~~~g~~~WgHa~S~DLv~W~~~p~al~p~~~~~d~~~~~~S 84 (353)
T d1y4wa2 5 QPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGNISWGHAISEDLTHWEEKPVALLARGFGSDVTEMYFS 84 (353)
T ss_dssp CTTCCSSSCCCSSEEEEEEEEEEEETTEEEEEEEECTTCSSSCSCEEEEEEESSSSSCEEEEEEECCBTTTSCCCBEEEE
T ss_pred CCCcCcEeecCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCeEEEEEEeccccceeECCccccCCccCcCCCCcccc
Confidence 3469999999999999999999999999999999999999999999999999999999999999999863 33 467999
Q ss_pred eeEEEccCC----------eEEEEEcccCC------------CCcceEEEEEecCCCCCCcceEEEe-CCCceecCCCC-
Q 008224 193 GSATILPDG----------QIVMLYTGSTD------------KSVQVQNLAYPADPSDPLLLDWVKY-PGNPVLVPPRH- 248 (573)
Q Consensus 193 GSavv~~dG----------~~~~~YTG~~~------------~~~q~q~lA~S~D~~Dp~L~~W~K~-~~nPVl~~p~g- 248 (573)
|||+++.+| .+++||||+.. ...|.|++|+|.|.+ ++|+|+ +.||||..++.
T Consensus 85 Gsav~~~~~~~~~~~~g~~~l~~~YT~~~~~~~~~~~~~~~~~~~~~q~~A~s~d~g----~~~~~~~~~npvi~~~~~~ 160 (353)
T d1y4wa2 85 GSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSGQTVQEDQQSQSIAYSLDDG----LTWTTYDAANPVIPNPPSP 160 (353)
T ss_dssp EEEEECTTCTTSCCCSSSCCEEEEEEEEESSCEECTTSCEECTTEEEEEEEEESSTT----SSCEECTTTCCSBCSCCTT
T ss_pred CceEecCCCccccccCCCceEEEEEeeeecccccccCcccccCCcEEEEEEEECCCC----cceEEecCCCeEecCCCCC
Confidence 999886443 58899999742 246889999998864 788886 57999986543
Q ss_pred C--CCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccce
Q 008224 249 I--GPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLD 326 (573)
Q Consensus 249 ~--~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~ 326 (573)
. ...+||||+|+|. .++.|+|++++ ....|.++||+|+||++|++.+++.......+||||||||+|...+
T Consensus 161 ~~~~~~~fRDP~V~~~-~~~~~~~~~~~-~~~~g~v~ly~S~Dl~~W~~~g~l~~~~~~g~~wECPdlf~l~~~~----- 233 (353)
T d1y4wa2 161 YEAEYQNFRDPFVFWH-DESQKWVVVTS-IAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDS----- 233 (353)
T ss_dssp CGGGTTSEEEEEEEEE-TTTTEEEEEEE-EGGGTEEEEEEESSSSSCEEEEEECCCSCCSSEEEEEEEEEEEBTT-----
T ss_pred CcccccccCCCceEEE-CCCCEEEEEEe-ecCCCeEEEEecCCCCceEEeccccccCCCCcceeeeEEEEeecCC-----
Confidence 2 3479999999775 44444444444 3446789999999999999999986554455699999999997543
Q ss_pred eccCCCCeEEEEEeeeCCC-------cceEEEEEEecCCCCcccCCCCCc--ccccceeeccC-CCcccceeecCCCCcE
Q 008224 327 TSATGPGIKHVLKASLDDT-------KVDHYAIGTYNPANDKWTPDNPEE--DVGIGLKWDYG-RYYASKSFYDPYKKRR 396 (573)
Q Consensus 327 ~s~~g~~~k~VL~~S~~~~-------~~~~Y~iG~~d~~~~~f~pd~~~~--d~g~~~~lD~G-~fYAs~tf~d~~~~Rr 396 (573)
|.+.||||..++... .+..|++|+||.. +|+|+.... ..+...++||| +|||+|||.|..++||
T Consensus 234 ----~~~~~~vl~~g~~~~~~~~~~~~~~~Y~vG~~d~~--~f~~~~~~~~~~~~~~~~lD~G~dfYA~qtf~d~~~gRr 307 (353)
T d1y4wa2 234 ----GNSTKWVITSGLNPGGPPGTVGSGTQYFVGEFDGT--TFTPDADTVYPGNSTANWMDWGPDFYAAAGYNGLSLNDH 307 (353)
T ss_dssp ----SSCEEEEEEEEEESCCSTTCCSCEEEEEEEEECSS--CEEECTTTSCSSSSCCEESCSSSSCEEEEECBSCCGGGC
T ss_pred ----CCceEEEEEecccCCCCcccccccceEEEEEecCc--eeeecCCccccCCCccceeecCcCeeECCceeCCCCCCE
Confidence 245799999886532 3578999999865 677765432 33445789999 7999999999878999
Q ss_pred EEEeeccCCCCCCCCcCCCCcccCcccEEEEEeec-CCceEEEcc
Q 008224 397 IVWGWINETDTESDDLEKGWASVQTIPRTVLYDNK-TGSNVVQWP 440 (573)
Q Consensus 397 Il~GW~~e~d~~~~~~~~GWag~lslPReL~L~~~-~g~~L~q~P 440 (573)
||||||++++......++||+|+|||||||+|++. ++.+|+|+|
T Consensus 308 i~~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~~~~~~L~Q~P 352 (353)
T d1y4wa2 308 VHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQP 352 (353)
T ss_dssp EEEEECSCTTTGGGCCCSSEECCBCCCEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCCccCCCCCCCCcceeeEeCEEEEEEECCCCCEEEEcC
Confidence 99999999998888888999999999999999852 235799998
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=9.6e-79 Score=623.45 Aligned_cols=284 Identities=36% Similarity=0.714 Sum_probs=250.7
Q ss_pred ccceeeeecCCCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEE
Q 008224 117 QRTSFHFQPEKNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSAT 196 (573)
Q Consensus 117 ~Rp~yHf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSav 196 (573)
+||+|||+|++||||||||++|++|+|||||||||+++.||+|+||||+|+|||||+++|+||.|+. |.+|||||||+
T Consensus 2 ~Rp~~H~~p~~gw~NDPnG~~~~~G~yHlfyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~al~p~~--d~~g~~sGsav 79 (294)
T d1uypa2 2 FKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSAV 79 (294)
T ss_dssp CSCSSSCCCSSEEEEEEEEEEEETTEEEEEEEEETTSSSSCSCEEEEEEESSSSSCEEEEEEECCSS--TTEEEEEEEEE
T ss_pred CCccCcccCCCCCcCCCccceEECCEEEEEEecCCCCCCCCCcEEEEEEeCCcCCeEECCccccccc--CCCCeEEEEEE
Confidence 5999999999999999999999999999999999999999999999999999999999999999986 67899999997
Q ss_pred EccCCeEEEEEcccCC-----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEE
Q 008224 197 ILPDGQIVMLYTGSTD-----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLT 271 (573)
Q Consensus 197 v~~dG~~~~~YTG~~~-----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~Mv 271 (573)
+ .+|++++||||... ...|.|++|+|.|+ ++|+|+++|||+..++.....+||||+| |. ++|+|+|+
T Consensus 80 ~-~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg-----~~w~k~~~npvi~~~~~~~~~~fRDP~V-~~-~~g~w~M~ 151 (294)
T d1uypa2 80 E-KDGKMFLVYTYYRDPTHNKGEKETQCVVMSENG-----LDFVKYDGNPVISKPPEEGTHAFRDPKV-NR-SNGEWRMV 151 (294)
T ss_dssp E-ETTEEEEEEEEEECCCSSCCCEEEEEEEEESSS-----SCCEECTTCCSBCSCSSTTEEEEEEEEE-EE-ETTEEEEE
T ss_pred e-cCCeEEEEEEEeeCCCCCCcceeeeEEEECCCC-----CceEeecCCceecCCCccCccccCCCcc-cc-cCCEEEEE
Confidence 5 79999999998743 24678899999874 8999999999999877767789999999 54 57999999
Q ss_pred Eeee-cCCeeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCCCcceEE
Q 008224 272 IGSK-IGKTGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDDTKVDHY 350 (573)
Q Consensus 272 vGs~-~~~~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~~~~~~Y 350 (573)
+|++ .++.|++++|+|+||++|++.+++... ...+||||||||+|+ .||||++|....+..+|
T Consensus 152 ~g~~~~~~~G~i~ly~S~Dl~~W~~~g~l~~~-~~~~~~ECPdlf~l~---------------~~~vl~~s~~~~~~~~y 215 (294)
T d1uypa2 152 LGSGKDEKIGRVLLYTSDDLFHWKYEGAIFED-ETTKEIECPDLVRIG---------------EKDILIYSITSTNSVLF 215 (294)
T ss_dssp EEEEETTTEEEEEEEEESSSSSEEEEEEEEEE-TTCSCEEEEEEEEET---------------TEEEEEEEETTTTEEEE
T ss_pred EEeeecCCccEEEEEEcCCccceeEeccceeC-CCCCceeeceEEEeC---------------CeeEEEEEecCCCCeee
Confidence 9987 467799999999999999999988643 445799999999995 28999999988888999
Q ss_pred EEEEecCCCCcccCCCCCcccccceeeccC-CCcccceeecCCCCcEEEEeeccCCCCC--CCCcCCCCcccCcccEEEE
Q 008224 351 AIGTYNPANDKWTPDNPEEDVGIGLKWDYG-RYYASKSFYDPYKKRRIVWGWINETDTE--SDDLEKGWASVQTIPRTVL 427 (573)
Q Consensus 351 ~iG~~d~~~~~f~pd~~~~d~g~~~~lD~G-~fYAs~tf~d~~~~RrIl~GW~~e~d~~--~~~~~~GWag~lslPReL~ 427 (573)
.+|+||. ++|+++. ..++|+| +|||+|||.| ++|||+||||++++.. .++...||+|+|||||||+
T Consensus 216 ~~G~~~~--~~f~~~~-------~~~lD~G~dfYA~qtf~~--~~R~i~~gW~~~~~~~~~~p~~~~gw~g~lslPRel~ 284 (294)
T d1uypa2 216 SMGELKE--GKLNVEK-------RGLLDHGTDFYAAQTFFG--TDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELY 284 (294)
T ss_dssp EEEEEET--TEEEEEE-------EEESCCSSSCEEEEECBS--CSSEEEEEESSCTTTGGGCCGGGGTEECCBCCCEEEE
T ss_pred EeeeecC--CeEEeec-------ceEEccCCceeeccCccC--CCCEEEEEECCCCcccccCCCccCCcccceeeCEEEE
Confidence 9999986 4787653 3579999 6999999998 4899999999998754 3456789999999999999
Q ss_pred EeecCCceEEEcc
Q 008224 428 YDNKTGSNVVQWP 440 (573)
Q Consensus 428 L~~~~g~~L~q~P 440 (573)
|+ +| +|+|+|
T Consensus 285 l~--~~-~L~q~P 294 (294)
T d1uypa2 285 VE--NN-ELKVKP 294 (294)
T ss_dssp EE--TT-EEEEEE
T ss_pred EE--CC-EEEecC
Confidence 95 34 799998
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=3.5e-30 Score=275.57 Aligned_cols=278 Identities=14% Similarity=0.187 Sum_probs=193.4
Q ss_pred ccCCcceeE-ECCEEEEEEeeCCCCCCCC---CcEEEEEEecCccCeeecceeccCCC--------CcCCCcEEeeeEEE
Q 008224 130 MNDPNGPLF-YKGWYHLFYQYNPDSAVWG---NITWGHAVSADLIHWLYLPIAMVPDQ--------WYDINGVWTGSATI 197 (573)
Q Consensus 130 mNDPNG~~y-~~G~YHLFYQ~nP~~~~wG---~~~WGHAvS~DLVhW~~lp~AL~Pd~--------~yD~~Gv~SGSavv 197 (573)
+.|++|-+. ++|++|+|++..|....+. .+.+.|+.|+||.||++.+.+|.+.. ..+..+-|||||++
T Consensus 57 l~d~~g~~~~~~G~~~~f~L~a~~~~~~d~~i~~~y~~~~s~dl~~W~~~G~vf~d~~~~~~~~~~~~~~~~eWSGSAv~ 136 (440)
T d1oyga_ 57 LQNADGTVANYHGYHIVFALAGDPKNADDTSIYMFYQKVGETSIDSWKNAGRVFKDSDKFDANDSILKDQTQEWSGSATF 136 (440)
T ss_dssp EECTTSSBCCBTTEEEEEEEEECTTCTTCCEEEEEEEETTCCSGGGCEEEEESCCTTHHHHTTCTTGGGCCEEEEEEEEE
T ss_pred eECCCCCEEEECCEEEEEEEeCCCCCCCCCeEEEEEeecCCCccCCCEECccccCCCccccccccccCCCCccCccceEE
Confidence 788888554 7999999999876543222 24466777899999999998775442 23445779999998
Q ss_pred ccCCeEEEEEcccCCCCcceEEEEEecC--CCCCCcceEEEeCCCceecCCCCC-----------------CCCCCCCCe
Q 008224 198 LPDGQIVMLYTGSTDKSVQVQNLAYPAD--PSDPLLLDWVKYPGNPVLVPPRHI-----------------GPKDFRDPT 258 (573)
Q Consensus 198 ~~dG~~~~~YTG~~~~~~q~q~lA~S~D--~~Dp~L~~W~K~~~nPVl~~p~g~-----------------~~~~fRDP~ 258 (573)
..||+++|||||........|.++.+.. ..|+++..|++...+++|..|+|. ...+||||+
T Consensus 137 ~~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~ 216 (440)
T d1oyga_ 137 TSDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPH 216 (440)
T ss_dssp CTTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEE
T ss_pred ccCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCc
Confidence 8899999999997643322333222110 012235788887777766655442 235899999
Q ss_pred eEeecCCCcEEEEEeeecC-------------------------------------------CeeEEEEEEeCCCCCcEE
Q 008224 259 TAWAGPDGKWRLTIGSKIG-------------------------------------------KTGISLVYQTTDFKTYEL 295 (573)
Q Consensus 259 V~w~~~dG~w~MvvGs~~~-------------------------------------------~~G~illY~S~Dl~~W~~ 295 (573)
| |. .+|+|||++++... ..++.+++.|+|+.+|++
T Consensus 217 v-~~-~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~D~~~We~ 294 (440)
T d1oyga_ 217 Y-VE-DKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELNDDYTLKKV 294 (440)
T ss_dssp E-EE-ETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECTTSSEEEE
T ss_pred e-ee-eCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCCCccccee
Confidence 9 54 47999999987521 123455667999999999
Q ss_pred cccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeee-------CCCcceEEEEEEe--cCCCCcccCCC
Q 008224 296 LDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASL-------DDTKVDHYAIGTY--NPANDKWTPDN 366 (573)
Q Consensus 296 ~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~-------~~~~~~~Y~iG~~--d~~~~~f~pd~ 366 (573)
.++++++....+|||||++|+++ .||+|..|. ++.+.+.|.++-| |.-.+.|+|.+
T Consensus 295 ~~pLl~a~~v~d~~ErP~I~~~n---------------GKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~PlN 359 (440)
T d1oyga_ 295 MKPLIASNTVTDEIERANVFKMN---------------GKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKPLN 359 (440)
T ss_dssp EEEEEECTTTCSCCEEEEEEEET---------------TEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEEGG
T ss_pred cCcceeccCCCCeEECCEEEEEC---------------CEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCeecC
Confidence 99999887777899999999985 278887663 2233332222222 56677899887
Q ss_pred C-CcccccceeeccCCC-cccceeecCCCCcEEEEeeccCCCCCCCCcCCCCcccCcccEEEEEe
Q 008224 367 P-EEDVGIGLKWDYGRY-YASKSFYDPYKKRRIVWGWINETDTESDDLEKGWASVQTIPRTVLYD 429 (573)
Q Consensus 367 ~-~~d~g~~~~lD~G~f-YAs~tf~d~~~~RrIl~GW~~e~d~~~~~~~~GWag~lslPReL~L~ 429 (573)
. -+.++.....|++.| |+..+|.+..++++++++||.+++. ..+...+| +-+.+|.|+
T Consensus 360 ~sGlvl~~~~~~~~~~~~Ys~~~~p~g~~~~~lv~s~~~~~~~-~~~~g~t~----APt~~l~l~ 419 (440)
T d1oyga_ 360 KTGLVLKMDLDPNDVTFTYSHFAVPQAKGNNVVITSYMTNRGF-YADKQSTF----APSFLLNIK 419 (440)
T ss_dssp GTSEEEEECCCTTCTTCEEEEEEECCSSSSEEEEEEEESCTTS-CSSCCCEE----CBCEEEEEE
T ss_pred CCcceeccCCCCCcCcccceeEEecCCCCceEEEEEeecCcCc-ccccCCcc----CCcEEEEEc
Confidence 4 356666668899965 9999999887789999999999873 23334444 444556664
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.68 E-value=1.7e-16 Score=162.86 Aligned_cols=156 Identities=13% Similarity=0.091 Sum_probs=115.8
Q ss_pred ceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecc-eeccCCC---CcCCCcEEeeeEEEccCCeEEEEEccc
Q 008224 135 GPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLP-IAMVPDQ---WYDINGVWTGSATILPDGQIVMLYTGS 210 (573)
Q Consensus 135 G~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp-~AL~Pd~---~yD~~Gv~SGSavv~~dG~~~~~YTG~ 210 (573)
|+++++|+|||+|+-. ...+.+++|+|+|+|+|||+..+ +.+.|+. .++..||+++.++. .+|+++|+||+.
T Consensus 49 ~~i~~~g~~~ll~r~~---~~~~~~~ig~A~S~DGi~w~~~~~pv~~p~~~~~~~~~~gv~DPrv~~-~~d~yym~yt~~ 124 (327)
T d1vkda_ 49 AVVPYNGEFVGVFRID---HKNTRPFLHFGRSKDGINWEIEPEEIQWVDVNGEPFQPSYAYDPRVVK-IEDTYYITFCTD 124 (327)
T ss_dssp EEEEETTEEEEEEEEE---ETTSCEEEEEEEESSSSSCEECSSCCCEECTTSCBCCCSSEEEEEEEE-ETTEEEEEEEEE
T ss_pred EEEEECCEEEEEEEec---CCCCceEEEEEEcCCccCCEeCCCCeecCCCCCcccccCcEEcceEEE-ECCEEEEEEEec
Confidence 6889999999999864 23567899999999999998765 4566764 35678999999975 689999999986
Q ss_pred CCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeee---cCCeeEEEEEEe
Q 008224 211 TDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSK---IGKTGISLVYQT 287 (573)
Q Consensus 211 ~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~---~~~~G~illY~S 287 (573)
.. .+.+++|+|+|. ++|+|.+ +++. ..-||+.++..+.+|+|+|+.-.. ....|.+.+.+|
T Consensus 125 ~~--~~~i~lA~S~D~-----~~w~k~g--~~~~-------~~~kd~~lfpeki~Gky~ml~Rp~~~~~~~~~~I~la~S 188 (327)
T d1vkda_ 125 DH--GPTIGVGMTKDF-----KTFVRLP--NAYV-------PFNRNGVLFPRKINGKYVMLNRPSDNGHTPFGDIFLSES 188 (327)
T ss_dssp SS--SEEEEEEEESSS-----SSEEEEC--CSSS-------SSEEEEEECSSCBTTBEEEEEEECCSSSCSCCCEEEEEE
T ss_pred CC--CcEEEEEEecCc-----chheecC--CccC-------ccccCceEeeeeccCeEEEEEeeccCCCcccceEEEEcC
Confidence 43 467899999985 8999984 3322 134788774444689999996432 123456889999
Q ss_pred CCCCCcEEcccccccCCCCCceee
Q 008224 288 TDFKTYELLDEYLHAVPGTGMWEC 311 (573)
Q Consensus 288 ~Dl~~W~~~~~l~~~~~~~GmWEC 311 (573)
+|+.+|+....++.. ...+.||+
T Consensus 189 ~Dl~~W~~~~~v~~~-~~~~~wd~ 211 (327)
T d1vkda_ 189 PDMIHWGNHRFVLGR-SSYNWWEN 211 (327)
T ss_dssp SSSSCBEEEEEEECC-CSSCGGGS
T ss_pred CCcccccccceeccc-CCCCceee
Confidence 999999987665532 22345654
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=99.58 E-value=9e-14 Score=138.55 Aligned_cols=180 Identities=15% Similarity=0.113 Sum_probs=120.7
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCc-------CCCcEEeeeEEEccCCe
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWY-------DINGVWTGSATILPDGQ 202 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~y-------D~~Gv~SGSavv~~dG~ 202 (573)
++||+ +++++|+||||+..... ...+.+++|+||+||+.++.++.+.... ...++|.++++. .+|+
T Consensus 10 ihDP~-vi~~~g~YY~~~t~~~~-----~~g~~i~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 82 (291)
T d1uv4a1 10 LHDPT-MIKEGSSWYALGTGLTE-----ERGLRVLKSSDAKNWTVQKSIFTTPLSWWSNYVPNYGQNQWAPDIQY-YNGK 82 (291)
T ss_dssp CSSCE-EEEETTEEEEEEECCTT-----SSBEEEEEESSSSSCEEEEEETSSCCGGGGGTSTTCCSBCEEEEEEE-ETTE
T ss_pred ccCCE-EEEECCEEEEEEecCCC-----CCcEEEEECCCCCCCEECcccccCCcccccccCCccCCcccceEEEE-ECCE
Confidence 56998 99999999999864221 2357889999999999999887654321 135799999864 7999
Q ss_pred EEEEEcccCCC-CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeE
Q 008224 203 IVMLYTGSTDK-SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGI 281 (573)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~ 281 (573)
++|+|++.... ..+.+++|++++. + ...|+.. ++++...+. .....+||.|+| ++||++||+.+... .|+
T Consensus 83 yylyy~~~~~~~~~~~i~~a~s~~~--~-~Gpw~~~--~~~~~~~~~-~~~~~iDp~vf~-D~dG~~Y~~~~~~~--~~i 153 (291)
T d1uv4a1 83 YWLYYSVSSFGSNTSAIGLASSTSI--S-SGGWKDE--GLVIRSTSS-NNYNAIDPELTF-DKDGNPWLAFGSFW--SGI 153 (291)
T ss_dssp EEEEEEECCTTCSCEEEEEEEESCT--T-TTCCEEE--EEEEEECTT-SSSCCCSCEEEE-CTTSCEEEEECBST--TCE
T ss_pred EEEEEEecCCCCCcceEEEEEeCCC--C-CCCCCcC--ccccccccC-CCCCccCceEEE-ecCCcEEEEecccC--Cce
Confidence 99999987543 3566789999773 1 1458764 334332222 234678999966 57899999998542 233
Q ss_pred EEEEE-eCCCCCcEEccccc---ccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 282 SLVYQ-TTDFKTYELLDEYL---HAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 282 illY~-S~Dl~~W~~~~~l~---~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.+++ +.|... ..+... ......++.|||.+|+.+ .+++|..|..
T Consensus 154 -~i~~l~~~~~~--~~g~~~~i~~~~~~~~~~EgP~i~k~~---------------g~Yyl~~S~~ 201 (291)
T d1uv4a1 154 -KLTKLDKSTMK--PTGSLYSIAARPNNGGALEAPTLTYQN---------------GYYYLMVSFD 201 (291)
T ss_dssp -EEEEECTTTCS--EEEEEEEEECCTTTTTCEEEEEEEEET---------------TEEEEEEEEE
T ss_pred -EEEeecccccc--CcCceeEEEecCCCCccccccEEEEEC---------------CEEEEEEecC
Confidence 3443 344433 222221 122234589999999985 2788888754
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=99.44 E-value=1.9e-12 Score=128.42 Aligned_cols=182 Identities=16% Similarity=0.153 Sum_probs=118.1
Q ss_pred ccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCC-------cCCCcEEeeeEEEccCCe
Q 008224 130 MNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQW-------YDINGVWTGSATILPDGQ 202 (573)
Q Consensus 130 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~-------yD~~Gv~SGSavv~~dG~ 202 (573)
+.||+ +++++|+||||... + .+..++|+||+||+.++.+|.+... ....++|.++++. .+|+
T Consensus 7 ~~DP~-v~~~~g~yYl~~t~-~--------gi~~~~S~DLvnW~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g~ 75 (318)
T d1gyha_ 7 VHDPV-MTREGDTWYLFSTG-P--------GITIYSSKDRVNWRYSDRAFATEPTWAKRVSPSFDGHLWAPDIYQ-HKGL 75 (318)
T ss_dssp CSSCE-EEEETTEEEEEESE-E--------TCEEEEESSSSEEEEEEESSSSCCTTHHHHCTTCCSEEEEEEEEE-ETTE
T ss_pred CCCCE-EEEECCEEEEEEee-C--------CEEEEECCCCCCCeECCccccCCccccccCCCcCCCceECCEEEE-EcCc
Confidence 46998 88899999998642 1 2456789999999999998865431 1245799999864 7899
Q ss_pred EEEEEcccCCC-CcceEEEEEecCCC-CCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCee
Q 008224 203 IVMLYTGSTDK-SVQVQNLAYPADPS-DPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTG 280 (573)
Q Consensus 203 ~~~~YTG~~~~-~~q~q~lA~S~D~~-Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G 280 (573)
++|||++.... ....+.+|++.... +.....|++. ..+....+......+|||.+++ +.+|++||+.++... +
T Consensus 76 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iDp~v~~-d~dG~~Yl~~~~~~~--~ 150 (318)
T d1gyha_ 76 FYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDK--GIVIESVPQRDLWNAIAPAIIA-DDHGQVWMSFGSFWG--G 150 (318)
T ss_dssp EEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEE--EEEEEECTTTCSSCCCCCEEEE-CTTSCEEEEECBSTT--C
T ss_pred eEEEEEEecCCCcccceeEEEEeccCCCccccccccC--ceecccCCCCCCCceEccceEe-ecCCcEEEeccCCCC--C
Confidence 99999997643 34556677765321 2223678875 2344333444556789999955 589999999986432 2
Q ss_pred EEEEEE-eCCCC------CcEEcccc----cccC--CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 281 ISLVYQ-TTDFK------TYELLDEY----LHAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 281 ~illY~-S~Dl~------~W~~~~~l----~~~~--~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
. .+.+ +.|+. .|...... +... ....++|||.+|+.+ .+++|..|..
T Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~---------------g~yyl~yS~~ 210 (318)
T d1gyha_ 151 L-KLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFILRKG---------------DYYYLFASWG 210 (318)
T ss_dssp E-EEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEEEEET---------------TEEEEEEEES
T ss_pred e-eeEecCccceeeccccccccccccccceeeccCCCCCceeecCEEEEEC---------------CEEEEEEecC
Confidence 1 1222 23332 23322211 1111 123489999999985 2788888754
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=99.37 E-value=9.8e-12 Score=123.96 Aligned_cols=181 Identities=22% Similarity=0.208 Sum_probs=117.5
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCC--------CCcCCCcEEeeeEEEccC
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPD--------QWYDINGVWTGSATILPD 200 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd--------~~yD~~Gv~SGSavv~~d 200 (573)
|..||+ +++++|+|+||... -++..++|+||+||+..+.+|... ...+..++|.+.++. .+
T Consensus 23 ~~~DP~-i~~~~g~yY~~~t~---------~gi~i~~S~DL~nW~~~g~~l~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 91 (312)
T d1wl7a1 23 WAHDPV-IAKEGSRWYVFHTG---------SGIQIKTSEDGVHWENMGRVFPSLPDWCKQYVPEKDEDHLWAPDICF-YN 91 (312)
T ss_dssp BCSSCE-EEEETTEEEEEESE---------ETCEEEEESSSSEEEEEEESCSSCCTTHHHHCTTCCSCEEEEEEEEE-ET
T ss_pred CcCCCE-EEEECCEEEEEEec---------CCceEEEcCCCCCceECcccccCCcccccccCCcccCCceEcceEEE-eC
Confidence 668998 88999999998532 135679999999999999887643 234678999999865 68
Q ss_pred CeEEEEEcccCCC-CcceEEEEEec--CCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC
Q 008224 201 GQIVMLYTGSTDK-SVQVQNLAYPA--DPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (573)
Q Consensus 201 G~~~~~YTG~~~~-~~q~q~lA~S~--D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~ 277 (573)
|+++|+||+.... ....+.+|.+. +..+|. ..|++. .|++..++ .....++||.+++ .++|++||+.+....
T Consensus 92 g~yyl~~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~--~~~~~~~~-~~~~~~iD~~~f~-d~dG~~y~~~~~~~~ 166 (312)
T d1wl7a1 92 GIYYLYYSVSTFGKNTSVIGLATNRTLDPRDPD-YEWKDM--GPVIHSTA-SDNYNAIDPNVVF-DQEGQPWLSFGSFWS 166 (312)
T ss_dssp TEEEEEEEECCTTCCCEEEEEEEESCSCTTSTT-CCCEEE--EEEEEECT-TSSSCCCSCEEEE-CTTSCEEEEECBSTT
T ss_pred CEEEEEEEeecCCcccceeeEEEEecccCCCCc-cccccc--cceecCCC-CCCCCcCCCceeE-ccCCcEEEeecCCCC
Confidence 9999999987643 34455666543 222332 567654 35544332 2345789999955 579999999875422
Q ss_pred CeeEEEEEE-eCCCCCcEEccccc-ccC--CCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeC
Q 008224 278 KTGISLVYQ-TTDFKTYELLDEYL-HAV--PGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLD 343 (573)
Q Consensus 278 ~~G~illY~-S~Dl~~W~~~~~l~-~~~--~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~ 343 (573)
.+.+++ +.|..........+ ... ......|+|.+|+.+ .+++|..|..
T Consensus 167 ---~i~~~~l~~d~~~~~~~~~~i~~~~~~~~~~~~EgP~v~k~~---------------g~yYl~ys~~ 218 (312)
T d1wl7a1 167 ---GIQLIQLDTETMKPAAQAELLTIASRGEEPNAIEAPFIVCRN---------------GYYYLFVSFD 218 (312)
T ss_dssp ---CEEEEEBCTTTCSBCTTCCCEEEECCSSSSCCEEEEEEEEET---------------TEEEEEEEES
T ss_pred ---ceeEEEEcCcCCcCcCCceEEEecccCCCCCcccccEEEEEC---------------CcEEEEEecC
Confidence 233444 33433221111111 111 123468999999874 2788888754
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.16 E-value=6.8e-09 Score=103.20 Aligned_cols=180 Identities=15% Similarity=0.032 Sum_probs=114.5
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC------CcCCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~------~yD~~Gv~SGSavv~~dG 201 (573)
|+-.||. +++++|.|+||+...... ..+.-++|+||+||+.++.+|.... ..+..++|...++. .+|
T Consensus 8 ~~~aDP~-v~~~~~~yY~~~tt~~~~-----~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 80 (321)
T d1y7ba2 8 GFNPDPS-ICRADTDYYIATSTFEWF-----PGVQIHHSKDLVNWHLVAHPLNRTSLLDMKGNPNSGGIWAPDLSY-HDG 80 (321)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBTEE-----SBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEEE-ETT
T ss_pred CCCCCCE-EEEECCEEEEEEecCCCC-----CCeEEEECCCccCCEEccccccCCcccccCCCcccCcccCceEEE-ECC
Confidence 4558997 889999999998643211 1234578999999999987775332 23456799999864 799
Q ss_pred eEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-
Q 008224 202 QIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI- 276 (573)
Q Consensus 202 ~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~- 276 (573)
+++|+|+..... ..+.+.+|++.+.. ..|+.. .. ......||.+++ +.+|+.+|+.+...
T Consensus 81 ~yylyys~~~~~~~~~~~~~~~~a~a~~p~----Gp~~~~----~~------~~~~~~D~~~~~-d~dg~~~~~~~~~~~ 145 (321)
T d1y7ba2 81 KFWLIYTDVKVTDGMWKDCHNYLTTCESVD----GVWSDP----IT------LNGSGFDASLFH-DNDGKKYLVNMYWDQ 145 (321)
T ss_dssp EEEEEEEEESCCSSSCCCEEEEEEEESSTT----SCCCCC----EE------CCCSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeeccCCCCccceeeEeeecCCCC----CCcccc----ee------ecccccCCcEEE-EcCCCEEEEEeccCC
Confidence 999999986432 24567788887753 334321 11 112457999955 58899999887542
Q ss_pred ----CC-eeEEEEEEeCCCCCcEEcccccccCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 277 ----GK-TGISLVYQTTDFKTYELLDEYLHAVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 277 ----~~-~G~illY~S~Dl~~W~~~~~l~~~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
.. .++.+...+.|..+..-....+.........|.|.+|+-+ .+++|..|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~---------------g~yyl~~s~~~ 203 (321)
T d1y7ba2 146 RTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGTDIKYTEGPHIYHIG---------------DYYYLFTAEGG 203 (321)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred CccccCccceeeEeeCCCcceEcCCceEEeeccCCCccccceEEEEC---------------CEEEEEEcCCC
Confidence 11 2333344456665554332222222223357999999864 26777776543
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=99.09 E-value=2.9e-09 Score=106.21 Aligned_cols=179 Identities=15% Similarity=0.159 Sum_probs=110.7
Q ss_pred CCcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC------CcCCCcEEeeeEEEccC
Q 008224 127 KNWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPD 200 (573)
Q Consensus 127 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~------~yD~~Gv~SGSavv~~d 200 (573)
.|+.-||. +++++|+|+||+.-+. + ...+.-++|+||+||+.++.+|.... ......+|.+.+. ..|
T Consensus 8 ~~~~aDP~-vi~~~~~yY~~~tt~~----~-~~gi~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~ 80 (317)
T d1yrza2 8 PGFHPDPS-IVRVGDDYYIATSTFE----W-FPGVRIHHSRDLKHWRFVSSPLTRTSQLDMKGNMNSGGIWAPCLS-YHD 80 (317)
T ss_dssp CSSCCSCE-EEEETTEEEEEECCBT----E-ESBCEEEEESSSSSCEEEECSBCSTTTCCCTTCCTTCEECSCEEE-EET
T ss_pred CCCCCCCE-EEEECCEEEEEEccCC----C-CCCeEEEECCCCCCCeECCccccCccccccCCCcccceeecceEE-EEC
Confidence 35678998 8899999999986321 1 11234579999999999988875433 2344568999876 479
Q ss_pred CeEEEEEcccCCC----CcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec
Q 008224 201 GQIVMLYTGSTDK----SVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI 276 (573)
Q Consensus 201 G~~~~~YTG~~~~----~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~ 276 (573)
|+++|+|+..... ....+.+|.+.+.. ..|+ .|+.. .....||.+++ +++|+.||+.+...
T Consensus 81 G~~ylyy~~~~~~~~~~~~~~~~~~~a~~p~----gp~~----~~~~~------~~~~iDp~~f~-D~dG~~Yl~~~~~~ 145 (317)
T d1yrza2 81 GTFYLIYTDVKQWHGAFKDAHNYLVTAQNIE----GPWS----DPIYL------NSSGFDPSLFH-DDDGRKWLVNMIWD 145 (317)
T ss_dssp TEEEEEEEEEEECSSSCCEEEEEEEEESSSS----SCCC----CCEEC------CCSCSCCEEEE-CTTSCEEEEEEEEC
T ss_pred CEEEEEEEEeccCCCCcccceEEEEecCCCC----CCcc----ceeee------cCCccCCcEEE-ecCCCEEEEEeccC
Confidence 9999999875321 23445567766543 3343 23322 13457999954 68999999887642
Q ss_pred C---C--eeEEEEEE-eCCCCCcEEcccccc--cCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 277 G---K--TGISLVYQ-TTDFKTYELLDEYLH--AVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 277 ~---~--~G~illY~-S~Dl~~W~~~~~l~~--~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
. . ...+.+.. +.+ .++..++... .....+..|+|.+|+.+ .+++|..|...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------g~yyl~~s~~~ 204 (317)
T d1yrza2 146 YRKGNHPFAGIILQEYSEA--EQKLVGPVKNIYKGTDIQLTEGPHLYKKD---------------GYYYLLVAEGG 204 (317)
T ss_dssp CCTTSCSEEEEEEEEEETT--TTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred cCCCCccccceeeeecCcc--cCeEcCCceEEEeccCCCcccCceEEEEC---------------CEEEEEEccCC
Confidence 1 1 11122222 333 3444443321 11223468999999864 26777777654
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=99.06 E-value=5.8e-08 Score=96.96 Aligned_cols=180 Identities=17% Similarity=0.084 Sum_probs=112.1
Q ss_pred CcccCCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCC------CcCCCcEEeeeEEEccCC
Q 008224 128 NWMNDPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQ------WYDINGVWTGSATILPDG 201 (573)
Q Consensus 128 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~------~yD~~Gv~SGSavv~~dG 201 (573)
++..||. +++++|.|+||+.-.. +......++|+||+||+.++.+|.... ..+..++|.+.+. ..+|
T Consensus 9 ~~~aDP~-v~~~~~~yY~~~tt~~-----~~~g~~i~~S~DLv~W~~~g~~~~~~~~~~~~~~~~~~~~WAPev~-~~~G 81 (322)
T d2exha2 9 GFHPDPS-ICRVGDDYYIAVSTFE-----WFPGVRIYHSKDLKNWRLVARPLNRLSQLNMIGNPDSGGVWAPHLS-YSDG 81 (322)
T ss_dssp SSCCSCE-EEEETTEEEEEECCBT-----EESBCEEEEESSSSSCEEEECCBCSTTTCCCTTCCTTCBBCSCEEE-EETT
T ss_pred CCCCCCE-EEEECCEEEEEEcCCC-----CCCCcEEEECCCcCCcEEcccccccccccccCCCcccCCcccceEE-EECC
Confidence 6678998 8899999999985321 111244578999999999987764322 2345679999986 4799
Q ss_pred eEEEEEcccCCC-C---cceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeecC
Q 008224 202 QIVMLYTGSTDK-S---VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIG 277 (573)
Q Consensus 202 ~~~~~YTG~~~~-~---~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~ 277 (573)
+++|+|+..... . .....+|.+.+.. ..|++ |+... ....||.+++ +.+|+.||+.+...+
T Consensus 82 ~yylyys~~~~~~~~~~~~~~~~~~sd~~~----gp~~~----~~~~~------~~~~dp~~f~-d~dG~~Yl~~~~~~~ 146 (322)
T d2exha2 82 KFWLIYTDVKVVEGQWKDGHNYLVTCDTID----GAWSD----PIYLN------SSGFDPSLFH-DEDGRKYLVNMYWDH 146 (322)
T ss_dssp EEEEEEEEECCCSSSCCCEEEEEEEESSTT----SCCCC----CEECC------CSCSCCEEEE-CTTSCEEEEEEEECC
T ss_pred EEEEEEEeecccCCCccccceEEEecCCCC----CCccc----ceEec------CCCCCCCeEE-EcCCCEEEEecccCC
Confidence 999999975432 1 2334566665532 23432 33321 2456999955 579999999876532
Q ss_pred ---CeeEEE-EEEeCCCCCcEEcccccc--cCCCCCceeeecEEEecccCcccceeccCCCCeEEEEEeeeCC
Q 008224 278 ---KTGISL-VYQTTDFKTYELLDEYLH--AVPGTGMWECVDFYPVAINGSVGLDTSATGPGIKHVLKASLDD 344 (573)
Q Consensus 278 ---~~G~il-lY~S~Dl~~W~~~~~l~~--~~~~~GmWECPd~f~l~~~~~~gl~~s~~g~~~k~VL~~S~~~ 344 (573)
...... .....+...++..+.... ........|.|.+|+.+ .+++|..|...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~---------------g~YYl~~s~~~ 204 (322)
T d2exha2 147 RVDHHPFYGIVLQEYSVEQKKLVGEPKIIFKGTDLRITEGPHLYKIN---------------GYYYLLTAEGG 204 (322)
T ss_dssp CTTSCSEEEEEEEEEETTTTEEEEEEEEEECCCTTCCCEEEEEEEET---------------TEEEEEEEESC
T ss_pred ccCcCCccceEEeeecCcCCeECCCcEEEEEecCCCcccCcEEEEEC---------------CEEEEEEeCCC
Confidence 111111 122334455666554322 11223467999999874 26777777654
|
| >d1vkda_ b.67.2.4 (A:) Hypothetical protein TM1225 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: TM1225-like predicted glycosylases domain: Hypothetical protein TM1225 species: Thermotoga maritima [TaxId: 2336]
Probab=99.02 E-value=3.9e-10 Score=114.87 Aligned_cols=125 Identities=15% Similarity=0.176 Sum_probs=94.8
Q ss_pred ecCccCeeecc-eeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceec
Q 008224 166 SADLIHWLYLP-IAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV 244 (573)
Q Consensus 166 S~DLVhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~ 244 (573)
|++++ |++.. +.|.|+..+...+||.++|+. .+|+++|+|.+...++...+++|+|+|+ ++|+|.+ .||+.
T Consensus 21 ~~~~~-~R~~~NPil~~~~~~~~~~vfNp~~i~-~~g~~~ll~r~~~~~~~~~ig~A~S~DG-----i~w~~~~-~pv~~ 92 (327)
T d1vkda_ 21 YTGPV-WRYSKNPIIGRNPVPKGARVFNSAVVP-YNGEFVGVFRIDHKNTRPFLHFGRSKDG-----INWEIEP-EEIQW 92 (327)
T ss_dssp CCSSE-EECTTCCSBCBSCSTTEEEEEEEEEEE-ETTEEEEEEEEEETTSCEEEEEEEESSS-----SSCEECS-SCCCE
T ss_pred CCCCc-eecCCCccccCCCCcchhceeccEEEE-ECCEEEEEEEecCCCCceEEEEEEcCCc-----cCCEeCC-CCeec
Confidence 45554 55443 678887766778899988865 7999999998877667778999999995 8999976 57765
Q ss_pred CCCC---CCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCCCCcEEcccccc
Q 008224 245 PPRH---IGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYLH 301 (573)
Q Consensus 245 ~p~g---~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~~ 301 (573)
+... .....++||.|.. .+++|||++.+.. +...+.+++|+|+++|+..+.+..
T Consensus 93 p~~~~~~~~~~gv~DPrv~~--~~d~yym~yt~~~-~~~~i~lA~S~D~~~w~k~g~~~~ 149 (327)
T d1vkda_ 93 VDVNGEPFQPSYAYDPRVVK--IEDTYYITFCTDD-HGPTIGVGMTKDFKTFVRLPNAYV 149 (327)
T ss_dssp ECTTSCBCCCSSEEEEEEEE--ETTEEEEEEEEES-SSEEEEEEEESSSSSEEEECCSSS
T ss_pred CCCCCcccccCcEEcceEEE--ECCEEEEEEEecC-CCcEEEEEEecCcchheecCCccC
Confidence 4321 3445788999965 4678999987753 334577999999999999887653
|
| >d1uv4a1 b.67.2.1 (A:3-293) Endo-1,5-arabinanase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Endo-1,5-arabinanase species: Bacillus subtilis [TaxId: 1423]
Probab=98.07 E-value=1.9e-05 Score=77.09 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=85.4
Q ss_pred eeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccC--eeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccCCC
Q 008224 136 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIH--WLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGSTDK 213 (573)
Q Consensus 136 ~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVh--W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~ 213 (573)
+++++|+|||||..+..+ .+....++|+|+|+.. |+..+..+.+....+ ......++++++||+.+|+|.....
T Consensus 76 v~~~~g~yylyy~~~~~~--~~~~~i~~a~s~~~~~Gpw~~~~~~~~~~~~~~-~~~iDp~vf~D~dG~~Y~~~~~~~~- 151 (291)
T d1uv4a1 76 IQYYNGKYWLYYSVSSFG--SNTSAIGLASSTSISSGGWKDEGLVIRSTSSNN-YNAIDPELTFDKDGNPWLAFGSFWS- 151 (291)
T ss_dssp EEEETTEEEEEEEECCTT--CSCEEEEEEEESCTTTTCCEEEEEEEEECTTSS-SCCCSCEEEECTTSCEEEEECBSTT-
T ss_pred EEEECCEEEEEEEecCCC--CCcceEEEEEeCCCCCCCCCcCccccccccCCC-CCccCceEEEecCCcEEEEecccCC-
Confidence 788899999999876433 2346789999999876 998765544433222 2345788888889999999965422
Q ss_pred CcceEEEEEe-cCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec--C--Cee-EEEEEEe
Q 008224 214 SVQVQNLAYP-ADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI--G--KTG-ISLVYQT 287 (573)
Q Consensus 214 ~~q~q~lA~S-~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~--~--~~G-~illY~S 287 (573)
+ +.++.- .|. ....... ..+...+.. ..-+=-|.+ ++ .+|+|||++++.. + ..+ .+.+++|
T Consensus 152 ~---i~i~~l~~~~-----~~~~g~~-~~i~~~~~~--~~~~EgP~i-~k-~~g~Yyl~~S~~~~~~~~~~~y~v~~~~s 218 (291)
T d1uv4a1 152 G---IKLTKLDKST-----MKPTGSL-YSIAARPNN--GGALEAPTL-TY-QNGYYYLMVSFDKCCDGVNSTYKIAYGRS 218 (291)
T ss_dssp C---EEEEEECTTT-----CSEEEEE-EEEECCTTT--TTCEEEEEE-EE-ETTEEEEEEEEECSSSSSCCEEEEEEEEE
T ss_pred c---eEEEeecccc-----ccCcCce-eEEEecCCC--CccccccEE-EE-ECCEEEEEEecCcccCCCCCCceeEEEEc
Confidence 1 233322 221 1222111 122222211 111224777 44 6899999987652 1 122 4567889
Q ss_pred CCCCC-cEEc
Q 008224 288 TDFKT-YELL 296 (573)
Q Consensus 288 ~Dl~~-W~~~ 296 (573)
+++.. |+..
T Consensus 219 ~~~~GP~~~~ 228 (291)
T d1uv4a1 219 KSITGPYLDK 228 (291)
T ss_dssp SSTTCCCBCT
T ss_pred CCCCCCCccC
Confidence 98764 6543
|
| >d1uypa2 b.67.2.3 (A:1-294) Beta-fructosidase (invertase), N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Glycosyl hydrolases family 32 N-terminal domain domain: Beta-fructosidase (invertase), N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.57 E-value=0.0006 Score=67.10 Aligned_cols=148 Identities=14% Similarity=0.192 Sum_probs=93.3
Q ss_pred ccccccccceeeeecCCCcccCCcc-----eeEECCEEEEEEeeC--CCCCCCCCcEEEEEEecCccCeeecc--eeccC
Q 008224 111 NAMFTWQRTSFHFQPEKNWMNDPNG-----PLFYKGWYHLFYQYN--PDSAVWGNITWGHAVSADLIHWLYLP--IAMVP 181 (573)
Q Consensus 111 ~~~~~w~Rp~yHf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~n--P~~~~wG~~~WGHAvS~DLVhW~~lp--~AL~P 181 (573)
..+..|.+-.-=+.|.. |..| .+..+|++++||..+ +.........-.+|+|+|+++|+..+ ++|.+
T Consensus 52 ~Dlv~W~~~~~al~p~~----d~~g~~sGsav~~~g~~~~~yT~~~~~~~~~~~~~~~~~a~s~dg~~w~k~~~npvi~~ 127 (294)
T d1uypa2 52 DDLVHWRHLPVALYPDD----ETHGVFSGSAVEKDGKMFLVYTYYRDPTHNKGEKETQCVVMSENGLDFVKYDGNPVISK 127 (294)
T ss_dssp SSSSSCEEEEEEECCSS----TTEEEEEEEEEEETTEEEEEEEEEECCCSSCCCEEEEEEEEESSSSCCEECTTCCSBCS
T ss_pred CCcCCeEECCccccccc----CCCCeEEEEEEecCCeEEEEEEEeeCCCCCCcceeeeEEEECCCCCceEeecCCceecC
Confidence 34666754433334432 5555 345699999999754 22222223567889999999998763 44544
Q ss_pred CCCcCCCcEEeeeEEEccCCeEEEEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEe
Q 008224 182 DQWYDINGVWTGSATILPDGQIVMLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAW 261 (573)
Q Consensus 182 d~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w 261 (573)
.......+.-...|. .++|+++|++.+...+..-...+..|+| |++|+.. .++.....+ ..+=-|.+ +
T Consensus 128 ~~~~~~~~fRDP~V~-~~~g~w~M~~g~~~~~~~G~i~ly~S~D-----l~~W~~~--g~l~~~~~~---~~~ECPdl-f 195 (294)
T d1uypa2 128 PPEEGTHAFRDPKVN-RSNGEWRMVLGSGKDEKIGRVLLYTSDD-----LFHWKYE--GAIFEDETT---KEIECPDL-V 195 (294)
T ss_dssp CSSTTEEEEEEEEEE-EETTEEEEEEEEEETTTEEEEEEEEESS-----SSSEEEE--EEEEEETTC---SCEEEEEE-E
T ss_pred CCccCccccCCCccc-ccCCEEEEEEEeeecCCccEEEEEEcCC-----ccceeEe--ccceeCCCC---CceeeceE-E
Confidence 333333455677764 5799999998776555445667888887 4899875 466543222 23445666 3
Q ss_pred ecCCCcEEEEEeee
Q 008224 262 AGPDGKWRLTIGSK 275 (573)
Q Consensus 262 ~~~dG~w~MvvGs~ 275 (573)
. -+++|+|+++..
T Consensus 196 ~-l~~~~vl~~s~~ 208 (294)
T d1uypa2 196 R-IGEKDILIYSIT 208 (294)
T ss_dssp E-ETTEEEEEEEET
T ss_pred E-eCCeeEEEEEec
Confidence 3 578999998754
|
| >d1gyha_ b.67.2.1 (A:) alpha-L-arabinanase {Cellvibrio cellulosa [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: alpha-L-arabinanase species: Cellvibrio cellulosa [TaxId: 155077]
Probab=97.46 E-value=0.00025 Score=68.60 Aligned_cols=150 Identities=14% Similarity=0.078 Sum_probs=80.9
Q ss_pred eeEECCEEEEEEeeCCCCCCCCCcEEEEEEec----CccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccC
Q 008224 136 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSA----DLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (573)
Q Consensus 136 ~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~----DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (573)
+++.+|+|||||-....+.....+..+.+++. ...+|+..+..+......+......+++++++||+.+++|.+..
T Consensus 69 v~~~~g~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDp~v~~d~dG~~Yl~~~~~~ 148 (318)
T d1gyha_ 69 IYQHKGLFYLYYSVSAFGKNTSAIGVTVNKTLNPASPDYRWEDKGIVIESVPQRDLWNAIAPAIIADDHGQVWMSFGSFW 148 (318)
T ss_dssp EEEETTEEEEEEEECCTTSCCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTTTCSSCCCCCEEEECTTSCEEEEECBST
T ss_pred EEEEcCceEEEEEEecCCCcccceeEEEEeccCCCccccccccCceecccCCCCCCCceEccceEeecCCcEEEeccCCC
Confidence 67889999999988765443333444444443 25789988766544433333334567888888999999997643
Q ss_pred CCCcceEEEEEecCC-CC-CCcceEEEe--CCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-C----CeeEE
Q 008224 212 DKSVQVQNLAYPADP-SD-PLLLDWVKY--PGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-G----KTGIS 282 (573)
Q Consensus 212 ~~~~q~q~lA~S~D~-~D-p~L~~W~K~--~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~----~~G~i 282 (573)
.. +.++...+. .- .....+... ...+++....+.....+=.|++ ++ .+|+|+|++.+.. . ....+
T Consensus 149 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~EgP~i-~k-~~g~yyl~yS~~~~~~~~~~~y~~ 222 (318)
T d1gyha_ 149 GG----LKLFKLNDDLTRPAEPQEWHSIAKLERSVLMDDSQAGSAQIEAPFI-LR-KGDYYYLFASWGLCCRKGDSTYHL 222 (318)
T ss_dssp TC----EEEEEBCTTSSSBCSSCCEEEEECCCCCTTSCTTSCCSCCEEEEEE-EE-ETTEEEEEEEESCCSCGGGCCCEE
T ss_pred CC----eeeEecCccceeeccccccccccccccceeeccCCCCCceeecCEE-EE-ECCEEEEEEecCCCCCCCccccee
Confidence 21 222222111 00 000122221 1122222222212222335777 44 5899999987542 1 12245
Q ss_pred EEEEeCCCC
Q 008224 283 LVYQTTDFK 291 (573)
Q Consensus 283 llY~S~Dl~ 291 (573)
.+++|+++.
T Consensus 223 ~~~~s~~~~ 231 (318)
T d1gyha_ 223 VVGRSKQVT 231 (318)
T ss_dssp EEEEESSTT
T ss_pred eeecccCCC
Confidence 567887765
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=97.22 E-value=0.00065 Score=67.49 Aligned_cols=140 Identities=10% Similarity=0.035 Sum_probs=94.0
Q ss_pred CCcceeEECCEEEEEEeeCCCCCCCCCcEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcccC
Q 008224 132 DPNGPLFYKGWYHLFYQYNPDSAVWGNITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTGST 211 (573)
Q Consensus 132 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 211 (573)
+|..|+.++|+|||+++--... .|...+-+-+++.+..+|+..|. | .-|+-...++. .+|+++|-||...
T Consensus 31 N~~apf~~~Gk~~l~~RvE~rd-~~s~s~v~lf~~~g~~~f~~~~~---p-----~~glEDPrvt~-i~g~lv~~~t~~~ 100 (310)
T d2b4wa1 31 NCSVPFSYKGKTHIYGRVEKRD-IWAASHVRLFEETGKDEFTAVPE---L-----SWELEDPYIAK-INNEMIFGGTRVR 100 (310)
T ss_dssp SCCCCEEETTEEEEEEEEECTT-CSSCCEEEEEEEEETTEEEECTT---C-----CBSCEEEEEEE-ETTEEEEEEEEEC
T ss_pred cCCcEEEECCEEEEEEEEEccC-cceEEEEEEEEecCCcceEECCc---c-----cccCCCCCEEe-ECCEEEEEEEEec
Confidence 4777889999999999987654 45667778889999999986542 1 12777888775 6899999999876
Q ss_pred CCCcceEEEEEecCCCCCCcceEEEeCCCceec-CCCCCCCCCCCCCeeEeecCCCcEEEEEeeecCCeeEEEEEEeCCC
Q 008224 212 DKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKIGKTGISLVYQTTDF 290 (573)
Q Consensus 212 ~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~-~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~~~~G~illY~S~Dl 290 (573)
.. ....++|.+.+ ++.|.+. -|++. .|++ .+|=-+ ....+|+|.|+.--+....|.+.+-.++||
T Consensus 101 ~~-~~~~~~~~t~~-----~r~~~~~--l~~f~~gp~~-----~Kdi~L-~e~~dGKy~~ftRP~~g~~g~Ig~~~~d~l 166 (310)
T d2b4wa1 101 KN-GNAILSYYGYF-----YRGTPDE--LTYFTRGPGC-----MKDIRV-LQLQDGRLGVFSRPRVGRKASIGFVILNSI 166 (310)
T ss_dssp ------CCCEEEEE-----EEEETTE--EEEEEECCTT-----CCCCEE-EECTTSCEEEEECCCC---CCEEEEEESCG
T ss_pred CC-CCcceEEEeee-----eecchhc--CceeecCCCc-----cccEEe-EEeeCCEEEEEEccccCCCCeeEEEEeCCh
Confidence 43 24455677665 3666543 45554 3333 244444 345799999997554444566777889999
Q ss_pred CCcEE
Q 008224 291 KTYEL 295 (573)
Q Consensus 291 ~~W~~ 295 (573)
.+|+.
T Consensus 167 ~~~t~ 171 (310)
T d2b4wa1 167 DELGA 171 (310)
T ss_dssp GGCSH
T ss_pred hhCCH
Confidence 99973
|
| >d2exha2 b.67.2.1 (A:3-324) Beta-D-xylosidase N-terminal domain {Geobacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Geobacillus stearothermophilus [TaxId: 1422]
Probab=96.55 E-value=0.022 Score=55.33 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=76.7
Q ss_pred cccCCcceeEECCEEEEEEeeCCCC-CCCCCcEEEEEEecCcc-CeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDS-AVWGNITWGHAVSADLI-HWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~-~~wG~~~WGHAvS~DLV-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
.+--|. +.|++|+|||||...... ..+.+..-..++|++.- -|++ +..+.. .-...++++++||+.+|+
T Consensus 70 ~~WAPe-v~~~~G~yylyys~~~~~~~~~~~~~~~~~~sd~~~gp~~~-~~~~~~-------~~~dp~~f~d~dG~~Yl~ 140 (322)
T d2exha2 70 GVWAPH-LSYSDGKFWLIYTDVKVVEGQWKDGHNYLVTCDTIDGAWSD-PIYLNS-------SGFDPSLFHDEDGRKYLV 140 (322)
T ss_dssp BBCSCE-EEEETTEEEEEEEEECCCSSSCCCEEEEEEEESSTTSCCCC-CEECCC-------SCSCCEEEECTTSCEEEE
T ss_pred Ccccce-EEEECCEEEEEEEeecccCCCccccceEEEecCCCCCCccc-ceEecC-------CCCCCCeEEEcCCCEEEE
Confidence 344475 788999999999754332 22222333445555433 4543 222211 113456778889999999
Q ss_pred EcccCCC--CcceEEEEEecCCCCCCcceEEEeCCCceec-CCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-CCeeEE
Q 008224 207 YTGSTDK--SVQVQNLAYPADPSDPLLLDWVKYPGNPVLV-PPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-GKTGIS 282 (573)
Q Consensus 207 YTG~~~~--~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~-~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-~~~G~i 282 (573)
|.+.... ......+....... ..++.. ..|... ... ....+=-|++ ++ .+|+|||++.+.. +..-.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~--~~~~~Egp~i-~k-~~g~YYl~~s~~~~~~~y~v 211 (322)
T d2exha2 141 NMYWDHRVDHHPFYGIVLQEYSV----EQKKLV-GEPKIIFKGT--DLRITEGPHL-YK-INGYYYLLTAEGGTRYNHAA 211 (322)
T ss_dssp EEEECCCTTSCSEEEEEEEEEET----TTTEEE-EEEEEEECCC--TTCCCEEEEE-EE-ETTEEEEEEEESCSSTTCEE
T ss_pred ecccCCccCcCCccceEEeeecC----cCCeEC-CCcEEEEEec--CCCcccCcEE-EE-ECCEEEEEEeCCCCCCCceE
Confidence 8765432 11122222221111 112221 123221 111 1122346787 44 5789999987542 222256
Q ss_pred EEEEeCCCC-CcEE
Q 008224 283 LVYQTTDFK-TYEL 295 (573)
Q Consensus 283 llY~S~Dl~-~W~~ 295 (573)
.+++|+++. -|+.
T Consensus 212 ~~~rS~~~~GP~~~ 225 (322)
T d2exha2 212 TIARSTSLYGPYEV 225 (322)
T ss_dssp EEEEESSTTCCCEE
T ss_pred EEEEeCCCCccccc
Confidence 788998865 4654
|
| >d1wl7a1 b.67.2.1 (A:2-313) Arabinanase-TS {Bacillus thermodenitrificans [TaxId: 33940]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Arabinanase-TS species: Bacillus thermodenitrificans [TaxId: 33940]
Probab=96.50 E-value=0.0099 Score=57.31 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=77.9
Q ss_pred eeEECCEEEEEEeeCCCCCCCCCcEEEEEEec-----C-ccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEEEcc
Q 008224 136 PLFYKGWYHLFYQYNPDSAVWGNITWGHAVSA-----D-LIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVMLYTG 209 (573)
Q Consensus 136 ~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~-----D-LVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 209 (573)
++|++|+|||||..+..+. +....+.+++. + ...|+..++.+.+... +.......+++++.||+.+++|.+
T Consensus 87 v~~~~g~yyl~~t~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~iD~~~f~d~dG~~y~~~~~ 163 (312)
T d1wl7a1 87 ICFYNGIYYLYYSVSTFGK--NTSVIGLATNRTLDPRDPDYEWKDMGPVIHSTAS-DNYNAIDPNVVFDQEGQPWLSFGS 163 (312)
T ss_dssp EEEETTEEEEEEEECCTTC--CCEEEEEEEESCSCTTSTTCCCEEEEEEEEECTT-SSSCCCSCEEEECTTSCEEEEECB
T ss_pred EEEeCCEEEEEEEeecCCc--ccceeeEEEEecccCCCCccccccccceecCCCC-CCCCcCCCceeEccCCcEEEeecC
Confidence 7788999999999876542 33444555432 2 3457766554443332 233456678888889999999976
Q ss_pred cCCCCcceEEEEE-ecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----CCeeEEE
Q 008224 210 STDKSVQVQNLAY-PADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----GKTGISL 283 (573)
Q Consensus 210 ~~~~~~q~q~lA~-S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~~~G~il 283 (573)
.... ..++. ..|. .+... +...+.....+....-+=-|++ ++ .+|+|||++.+.. +....+.
T Consensus 164 ~~~~----i~~~~l~~d~-----~~~~~-~~~~i~~~~~~~~~~~~EgP~v-~k-~~g~yYl~ys~~~~~~~~~~~~~~~ 231 (312)
T d1wl7a1 164 FWSG----IQLIQLDTET-----MKPAA-QAELLTIASRGEEPNAIEAPFI-VC-RNGYYYLFVSFDFCCRGIESTYKIA 231 (312)
T ss_dssp STTC----EEEEEBCTTT-----CSBCT-TCCCEEEECCSSSSCCEEEEEE-EE-ETTEEEEEEEESCCSSGGGCCCEEE
T ss_pred CCCc----eeEEEEcCcC-----CcCcC-CceEEEecccCCCCCcccccEE-EE-ECCcEEEEEecCCCcCCCCCCceEE
Confidence 4321 22332 2221 11111 1122322222212222346777 44 6899999987642 1223566
Q ss_pred EEEeCCCC
Q 008224 284 VYQTTDFK 291 (573)
Q Consensus 284 lY~S~Dl~ 291 (573)
+++|+++.
T Consensus 232 ~a~s~~~~ 239 (312)
T d1wl7a1 232 VGRSKDIT 239 (312)
T ss_dssp EEEESSTT
T ss_pred EEecCCCC
Confidence 78898865
|
| >d1y7ba2 b.67.2.1 (A:4-324) Beta-D-xylosidase N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Clostridium acetobutylicum [TaxId: 1488]
Probab=96.16 E-value=0.025 Score=54.42 Aligned_cols=137 Identities=9% Similarity=-0.098 Sum_probs=82.4
Q ss_pred cccCCcceeEECCEEEEEEeeCCCCCCCCC--cEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEEEE
Q 008224 129 WMNDPNGPLFYKGWYHLFYQYNPDSAVWGN--ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIVML 206 (573)
Q Consensus 129 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~--~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 206 (573)
...||+-++-.+|+.+++|-....+...+. .......+.|+.+....+..+.... .....-|..++..+|.++||
T Consensus 122 ~~~D~~~~~d~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Egp~v~k~~g~yyl~ 198 (321)
T d1y7ba2 122 SGFDASLFHDNDGKKYLVNMYWDQRTYNHNFYGIVLQEYSDKEKKLIGKAKIIYKGT---DIKYTEGPHIYHIGDYYYLF 198 (321)
T ss_dssp SCSCCEEEECTTSCEEEEEEEECCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECCC---TTCCCEEEEEEEETTEEEEE
T ss_pred cccCCcEEEEcCCCEEEEEeccCCCccccCccceeeEeeCCCcceEcCCceEEeecc---CCCccccceEEEECCEEEEE
Confidence 457887433347887777754333333332 3345556788888876665554332 12345677777789999999
Q ss_pred EcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCC---eeEeecCCCcEEEEEee
Q 008224 207 YTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDP---TTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 207 YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP---~V~w~~~dG~w~MvvGs 274 (573)
|+.........+.+|+|++. +..|++.+.+|++.....- ...+.-| .+ ...++|+|+|+.-+
T Consensus 199 ~s~~~~~~~y~~~~~rs~~~----~Gp~~~~~~~p~~~~~~~~-~~~~~g~GH~~~-v~~~~g~~~~~~h~ 263 (321)
T d1y7ba2 199 TAEGGTTYEHSETVARSKNI----DGPYEIDPEYPLLTSWHDP-RNSLQKCGHASL-VHTHTDEWYLAHLV 263 (321)
T ss_dssp EEESCSSTTCEEEEEEESST----TCCCEECTTCCSEECTTCT-TCSSEEEEEEEE-EECTTSCEEEEEEE
T ss_pred EcCCCCCCCcceEEEEEccc----CCccccCCCCceeeeecCC-CCCcccCCEEEE-EECCCCCEEEEEEe
Confidence 98765444456788888775 3578888889998642110 0111111 12 34567788877643
|
| >d1yrza2 b.67.2.1 (A:1004-1320) Beta-D-xylosidase N-terminal domain {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: alpha-L-arabinanase-like domain: Beta-D-xylosidase N-terminal domain species: Bacillus halodurans [TaxId: 86665]
Probab=96.07 E-value=0.034 Score=53.67 Aligned_cols=137 Identities=12% Similarity=-0.011 Sum_probs=76.8
Q ss_pred CcccCCcceeEE-CCEEEEEEeeCCCCCCCCC--cEEEEEEecCccCeeecceeccCCCCcCCCcEEeeeEEEccCCeEE
Q 008224 128 NWMNDPNGPLFY-KGWYHLFYQYNPDSAVWGN--ITWGHAVSADLIHWLYLPIAMVPDQWYDINGVWTGSATILPDGQIV 204 (573)
Q Consensus 128 gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~--~~WGHAvS~DLVhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 204 (573)
.+.-||. ++++ +|+.+|+|........... ..+....+.|...-...+..+... ...++.-|..++..+|+++
T Consensus 122 ~~~iDp~-~f~D~dG~~Yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Egp~i~k~~g~yy 197 (317)
T d1yrza2 122 SSGFDPS-LFHDDDGRKWLVNMIWDYRKGNHPFAGIILQEYSEAEQKLVGPVKNIYKG---TDIQLTEGPHLYKKDGYYY 197 (317)
T ss_dssp CSCSCCE-EEECTTSCEEEEEEEECCCTTSCSEEEEEEEEEETTTTEEEEEEEEEECC---CTTCCCEEEEEEEETTEEE
T ss_pred CCccCCc-EEEecCCCEEEEEeccCcCCCCccccceeeeecCcccCeEcCCceEEEec---cCCCcccCceEEEECCEEE
Confidence 3446887 5554 7887777754332221111 112233345544332222222222 1345678888888899999
Q ss_pred EEEcccCCCCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCC---CCeeEeecCCCcEEEEEee
Q 008224 205 MLYTGSTDKSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFR---DPTTAWAGPDGKWRLTIGS 274 (573)
Q Consensus 205 ~~YTG~~~~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fR---DP~V~w~~~dG~w~MvvGs 274 (573)
|+|.+........+++|+|++. +-.|++.+.+|++....... ..+. -..+ ...++|+|+|+.-+
T Consensus 198 l~~s~~~~~~~y~v~~~~s~~~----~Gp~~~~~~~p~~~~~~~~~-~~~~g~GH~s~-~~~~dG~~~~~~h~ 264 (317)
T d1yrza2 198 LLVAEGGTEYEHAATLARSQSI----DGPYETDPSYPLVTSTGQPE-LALQKAGHGSL-VETQNGEWYLAHLC 264 (317)
T ss_dssp EEEEESCSSTTCEEEEEEESST----TCCCEECTTCCSEECTTCTT-CSSEEEEEEEE-EECTTSCEEEEEEE
T ss_pred EEEccCCCCCcceEEEEEECCC----CCccccCCCcceeccCCCCc-CCcccCCccEE-EECCCCeEEEEEEE
Confidence 9999765443455788999775 35788888899986432110 1111 1222 34567888877643
|
| >d1y4wa1 b.29.1.19 (A:373-536) Exo-inulinase {Aspergillus awamori [TaxId: 105351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Concanavalin A-like lectins/glucanases superfamily: Concanavalin A-like lectins/glucanases family: Glycosyl hydrolases family 32 C-terminal domain domain: Exo-inulinase species: Aspergillus awamori [TaxId: 105351]
Probab=95.15 E-value=0.011 Score=52.91 Aligned_cols=79 Identities=13% Similarity=0.162 Sum_probs=50.4
Q ss_pred Hhhhcccee--eeeEEeCCCceeeeecccceEEEEEEEEEeeccCcccccCcccccCCCccccccCcceEEEEEcCCCce
Q 008224 445 ESLRQNSTV--FEEVVVEPGSVVPLDIGVATQLDISAEFETELLGSGAMEEGYGCSGGAIDRSAMGPFGLLVNAHDSLSE 522 (573)
Q Consensus 445 e~LR~~~~~--~~~~~l~~g~~~~l~~~~~~qldi~a~f~~~l~~~~~~~~~~~c~~ga~~r~~~gpfGl~vla~~~~~E 522 (573)
.+||..... ....++..|+.. +. ..+.+++|+++|++. . ....|||.|++++++.|
T Consensus 4 ~~~~~~~~~~~~~~~tl~~g~~~-~~-~~g~~~el~l~~~~~--~------------------~a~~fgl~lr~s~d~~e 61 (164)
T d1y4wa1 4 SSISNKRPIYSRTFKTLSEGSTN-TT-TTGETFKVDLSFSAK--S------------------KASTFAIALRASANFTE 61 (164)
T ss_dssp GGTBCSSCSEEEEEEEECSEECC-CE-ECCSSEEEEEEEETT--C------------------SSSEEEEEEEECTTSSS
T ss_pred HhhhhcCceecccccccccceEe-cC-CcCcEEEEEEEEEcC--C------------------CccEEEEEEEEcCCCCE
Confidence 456555432 334555555542 32 234578888887632 0 01259999999999999
Q ss_pred eeeEEEEEccCCCCCEEEEeecCCCCCCc
Q 008224 523 LTPIFFRSSNTTKGTNTYFCADETRFVCF 551 (573)
Q Consensus 523 ~T~v~f~v~~~~~~~~~~~c~d~~rSs~~ 551 (573)
+|.|+|.. ....++.|+++|+..
T Consensus 62 ~t~i~yd~------~~~~l~vDRs~sg~~ 84 (164)
T d1y4wa1 62 QTLVGYDF------AKQQIFLDRTHSGDV 84 (164)
T ss_dssp CEEEEEET------TTTEEEEECTTSSCC
T ss_pred EEEEEEEC------CCCEEEEECCCCCCC
Confidence 99999952 212456899999764
|
| >d1oyga_ b.67.2.2 (A:) Levansucrase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: Levansucrase domain: Levansucrase species: Bacillus subtilis [TaxId: 1423]
Probab=94.33 E-value=0.25 Score=50.69 Aligned_cols=146 Identities=13% Similarity=0.115 Sum_probs=81.4
Q ss_pred ECCEEEEEEeeCCCCCC-CCC--cEEEE-EEecCccCee---ecceeccCCCC-cC---------------CCcEEeeeE
Q 008224 139 YKGWYHLFYQYNPDSAV-WGN--ITWGH-AVSADLIHWL---YLPIAMVPDQW-YD---------------INGVWTGSA 195 (573)
Q Consensus 139 ~~G~YHLFYQ~nP~~~~-wG~--~~WGH-AvS~DLVhW~---~lp~AL~Pd~~-yD---------------~~Gv~SGSa 195 (573)
.+|+++|||.-+-.... ... ..=++ ++|.+.+.|+ ..++.+.||.. |. ....-...+
T Consensus 138 ~DG~~~LfYTg~~~~~~~~q~i~~a~~~~~~d~~~~~~~~~~~~~~l~~pDG~~Yqt~~q~~~~~~~~~~d~~~fRDP~v 217 (440)
T d1oyga_ 138 SDGKIRLFYTDFSGKHYGKQTLTTAQVNVSASDSSLNINGVEDYKSIFDGDGKTYQNVQQFIDEGNYSSGDNHTLRDPHY 217 (440)
T ss_dssp TTSCEEEEEEEEEGGGTTEEEEEEEEEEEEECSSCEEEEEEEEEEEEECCCSSSBCCHHHHHHHTGGGGTCCCCCEEEEE
T ss_pred cCCeEEEEEEeccCCCCCcceEEEEEEEEeecCCcceeecccCCceeecCCCccceeeecccccCCCCCCCcccccCCce
Confidence 58999999985422111 111 12233 3455556553 44567778753 31 123346665
Q ss_pred EEccCCeEEEEEcccCCCC--c---------------------------------------ceEEEEEecCCCCCCcceE
Q 008224 196 TILPDGQIVMLYTGSTDKS--V---------------------------------------QVQNLAYPADPSDPLLLDW 234 (573)
Q Consensus 196 vv~~dG~~~~~YTG~~~~~--~---------------------------------------q~q~lA~S~D~~Dp~L~~W 234 (573)
+ ..+|+.+|+|.|+.... . -.++|+...+ .+..|
T Consensus 218 ~-~~~g~~y~~fegn~~~~~G~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ng~I~l~~~s~----D~~~W 292 (440)
T d1oyga_ 218 V-EDKGHKYLVFEANTGTEDGYQGEESLFNKAYYGKSTSFFRQESQKLLQSDKKRTAELANGALGMIELND----DYTLK 292 (440)
T ss_dssp E-EETTEEEEEEEEEBCTTSCCSSGGGGGBGGGTCSCHHHHHHHHHHHHHSTTHHHHHHCCEEEEEEEECT----TSSEE
T ss_pred e-eeCCeEEEEEeccccccccccccchhccccccccccccccccccccccccccccceeccceEEEEEeCC----Ccccc
Confidence 4 46899999999865310 0 1234554322 14789
Q ss_pred EEeCCCceecCCCCCCCCCCCCCeeEeecCCCcEEEEEeeec-----C---Cee-EEEEEEeCCCC-CcEE
Q 008224 235 VKYPGNPVLVPPRHIGPKDFRDPTTAWAGPDGKWRLTIGSKI-----G---KTG-ISLVYQTTDFK-TYEL 295 (573)
Q Consensus 235 ~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~dG~w~MvvGs~~-----~---~~G-~illY~S~Dl~-~W~~ 295 (573)
+.. .|++..... ...+=-|.++ + .+|+|||+..++. + ..+ .+..|.|+.+. .|+.
T Consensus 293 e~~--~pLl~a~~v--~d~~ErP~I~-~-~nGKYYLFtss~~~~~a~~~~~~~~~~~~g~Vsdsl~Gpy~P 357 (440)
T d1oyga_ 293 KVM--KPLIASNTV--TDEIERANVF-K-MNGKWYLFTDSRGSKMTIDGITSNDIYMLGYVSNSLTGPYKP 357 (440)
T ss_dssp EEE--EEEEECTTT--CSCCEEEEEE-E-ETTEEEEEEEEEGGGCCCTTCCTTCEEEEEEEESSTTCCCEE
T ss_pred eec--CcceeccCC--CCeEECCEEE-E-ECCEEEEEEecccccccCCCcCCCCceEEEEECCCCCCCCee
Confidence 987 477764321 1234468884 3 5899999887642 1 112 34467777665 4654
|
| >d1w8oa3 b.68.1.1 (A:47-402) Micromonospora sialidase, N-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Micromonospora sialidase, N-terminal domain species: Micromonospora viridifaciens [TaxId: 1881]
Probab=91.05 E-value=0.42 Score=44.48 Aligned_cols=105 Identities=17% Similarity=0.094 Sum_probs=62.2
Q ss_pred EE-eeeEEEccCCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecC
Q 008224 190 VW-TGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (573)
Q Consensus 190 v~-SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~ 264 (573)
+| -.+++..+||.++++|.+... .....+.+.+|+|.+ ++|.+. ..|...+.+.....+.||.+.....
T Consensus 20 ~~RiPslv~~~~G~lla~~~~r~~~~~d~~~~~i~~~rS~D~G----~TWs~~--~~v~~~~~~~~~~~~~~~~~v~~~~ 93 (356)
T d1w8oa3 20 NYRIPALTVTPDGDLLASYDGRPTGIGAPGPNSILQRRSTDGG----RTWGEQ--QVVSAGQTTAPIKGFSDPSYLVDRE 93 (356)
T ss_dssp CEEEEEEEECTTSCEEEEEEECTTSCSTTSCCEEEEEEESSTT----SSCCCC--EEEECCBCSSSCBEEEEEEEEECTT
T ss_pred eeEeCEEEEECCCCEEEEEeeeeCCCCCCCCceEEEEEccCCC----CCCCCC--EEeecCCCCCcccccccceEEEeCC
Confidence 46 467777789999999976432 234557788999986 899753 2222333232334566888655555
Q ss_pred CCcEEEEEeeecC---------------CeeEEEEEEeCC-CCCcEEccccc
Q 008224 265 DGKWRLTIGSKIG---------------KTGISLVYQTTD-FKTYELLDEYL 300 (573)
Q Consensus 265 dG~w~MvvGs~~~---------------~~G~illY~S~D-l~~W~~~~~l~ 300 (573)
+|.-+++...... ....+.+++|+| ...|+....+.
T Consensus 94 ~g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~~~ 145 (356)
T d1w8oa3 94 TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITA 145 (356)
T ss_dssp TCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESSTTSSCEEEECGG
T ss_pred CCeEEEEEeeeccCCcccccccCCCCCCcEEEEEEEecCCcccccccccccc
Confidence 6764443332210 112356777765 68998765443
|
| >d2b4wa1 b.67.2.5 (A:2-311) Hypothetical protein LmjF10.1260 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Arabinanase/levansucrase/invertase family: LmjF10.1260-like domain: Hypothetical protein LmjF10.1260 species: Leishmania major [TaxId: 5664]
Probab=81.17 E-value=0.33 Score=47.51 Aligned_cols=96 Identities=11% Similarity=0.034 Sum_probs=59.3
Q ss_pred CcEEeeeEEEccCCeEEEEEcccCCCC--cceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecCC
Q 008224 188 NGVWTGSATILPDGQIVMLYTGSTDKS--VQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGPD 265 (573)
Q Consensus 188 ~Gv~SGSavv~~dG~~~~~YTG~~~~~--~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~d 265 (573)
.-||-.+|.+..+|+++|++--..++. .-..+++.+.+. .+|+..+ +|+. ..-||++.+. +
T Consensus 27 ~DVyN~~apf~~~Gk~~l~~RvE~rd~~s~s~v~lf~~~g~-----~~f~~~~-~p~~---------glEDPrvt~i--~ 89 (310)
T d2b4wa1 27 YDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGK-----DEFTAVP-ELSW---------ELEDPYIAKI--N 89 (310)
T ss_dssp CEEESCCCCEEETTEEEEEEEEECTTCSSCCEEEEEEEEET-----TEEEECT-TCCB---------SCEEEEEEEE--T
T ss_pred cceecCCcEEEECCEEEEEEEEEccCcceEEEEEEEEecCC-----cceEECC-cccc---------cCCCCCEEeE--C
Confidence 349998886667999999998655443 233445445443 6777764 5664 2349999764 6
Q ss_pred CcEEEEEeeecCCeeEEEEEEeCCCCCcEEccccc
Q 008224 266 GKWRLTIGSKIGKTGISLVYQTTDFKTYELLDEYL 300 (573)
Q Consensus 266 G~w~MvvGs~~~~~G~illY~S~Dl~~W~~~~~l~ 300 (573)
|+|+|-.-+.....+.+.+|++.|++.|+.....+
T Consensus 90 g~lv~~~t~~~~~~~~~~~~~t~~~r~~~~~l~~f 124 (310)
T d2b4wa1 90 NEMIFGGTRVRKNGNAILSYYGYFYRGTPDELTYF 124 (310)
T ss_dssp TEEEEEEEEEC-----CCCEEEEEEEEETTEEEEE
T ss_pred CEEEEEEEEecCCCCcceEEEeeeeecchhcCcee
Confidence 88876543332233455678888888886443443
|
| >d3sila_ b.68.1.1 (A:) Salmonella sialidase {Salmonella typhimurium, strain lt2 [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Sialidases family: Sialidases (neuraminidases) domain: Salmonella sialidase species: Salmonella typhimurium, strain lt2 [TaxId: 90371]
Probab=80.15 E-value=4.1 Score=38.89 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=59.4
Q ss_pred EE-eeeEEEccCCeEEEEEcccCC----CCcceEEEEEecCCCCCCcceEEEeCCCceecCCCCCCCCCCCCCeeEeecC
Q 008224 190 VW-TGSATILPDGQIVMLYTGSTD----KSVQVQNLAYPADPSDPLLLDWVKYPGNPVLVPPRHIGPKDFRDPTTAWAGP 264 (573)
Q Consensus 190 v~-SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~Dp~L~~W~K~~~nPVl~~p~g~~~~~fRDP~V~w~~~ 264 (573)
+| ..+.+..++|.+++++.+... ...-.+.++.|.|++ ++|.+. ..|...+.......+.||..++...
T Consensus 32 ~yRiP~L~~~~~G~llA~~e~R~~~~~d~~~~div~~rS~DgG----kTWs~~--~~i~~~~~~~~~~~~~~p~~v~~~~ 105 (379)
T d3sila_ 32 YFRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTDGG----KTWNKK--IAIYNDRVNSKLSRVMDPTCIVANI 105 (379)
T ss_dssp EEEEEEEEECTTCCEEEEEEEESSCSCSSSCEEEEEEEESSSS----SCCEEE--EEECCCCSCTTTCEEEEEEEEEEEE
T ss_pred eEeccEEEEECCCcEEEEEeeEECCCCCCCCceEEEEEecCCc----cCCCCC--EEccCCCCCccccccCCccEEEECC
Confidence 45 566666789999999976432 122334567899986 999874 2333322222335567898766656
Q ss_pred CCcEE-EEEeee-c--------------CCeeEEEEEEe-CCCCCcEEcccc
Q 008224 265 DGKWR-LTIGSK-I--------------GKTGISLVYQT-TDFKTYELLDEY 299 (573)
Q Consensus 265 dG~w~-MvvGs~-~--------------~~~G~illY~S-~Dl~~W~~~~~l 299 (573)
+|.-. +++... . ...-...+++| +|...|.....+
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~g~tw~~p~~~ 157 (379)
T d3sila_ 106 QGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDDGVTFSKVETN 157 (379)
T ss_dssp TTEEEEEEEEEEESSCCSCGGGCCSSSSCTTCEEEEEEESSTTSCCEEECCS
T ss_pred CCCEEEEEEEEecCCCCCccccccccCCCCceeEEEEecCccccccccCccc
Confidence 66543 333221 1 01113445555 557889875544
|