Citrus Sinensis ID: 008231

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570---
MVLVASHGEKDEAENVVDFRGNPVDRSKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQHRVKGDKELENFNDGKV
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHEEEEEEEEEccccccccHHHHHHHHHHHHHHHHccccEEECcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc
***************VVDFRGNPV**SKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQ*****************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVLVASHGEKDEAENVVDFRGNPVDRSKTGGWLAAGLILGTELSERICAMGISMNLVTYLVGDLHLSSAKSATIVTNFMGTLNLLGLLGGFLADAKLGRYLTVAIFASVTALVVGLLTSATSIPSMRPPQCDDYRRKHHQCIEANGKQLAMLYAALYTIALGGGGIKSNVSGFGSDQFDTSDPKEEKAMIFFFNRFYFAISIGSLFAVIVLVYVQDNVGRGWGYGISAGTMVVAAAILLIGTPWYRFKKPRGSPLTVIWRVLLLAWKKRSHPYPDHPSLLNEYQNAKVPHTEKFKCLDKAAIIEDNAVANENKNNSWIVSTVTEVEEVKMVLKLLPIWATCILFWTVYSQMTTFTVEQATFMNRKIGSFTVPSGSLSAFLFITILLFTSLNEKVFVPLARKITHSIQGMTSLQRVGTGLIFSVIAMIVSAVIEQQRRETSVQKHIQISAFWLVPQYFLVGAGEAFVYVGQLEFFIREGPERMKSMSTGLFLSAISMGMFVSSMLVSIVDKITNKHWLRSNLNKGKLNNFYWLLAVLGLLNFMVFLFFAMKHQYNVQHRVKGDKELENFNDGKV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nitrate transporter 1.3 Low-affinity nitrate transporter.confidentQ9LVE0

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2XUT, chain A
Confidence level:very confident
Coverage over the Query: 34-121,147-249,270-394,410-530
View the alignment between query and template
View the model in PyMOL
Template: 4GC0, chain A
Confidence level:confident
Coverage over the Query: 68-270,295-403,415-564
View the alignment between query and template
View the model in PyMOL