Citrus Sinensis ID: 008257

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570--

MTSSKSENLLTVEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHIDKIPNFSGIFPNMG

ccccccccHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccCCccccc

***********VEKAEKTLANLEKCENNVRQMAENGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLES**LTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHIDKIPNFSGIFPNM*

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MTSSKSENLLTxxxxxxxxxxxxxxxxxxxxxxxxGRLQPLLTQILEGPQETKLSLAAFLGDLALNSDVKVLVARTVGSCLINIMKSGNMQAREAALKALNQISSCEPSAKVLIHAGILPPLVKDLFTVGSNHLPMRLKEVSATILANVVNSGHDFDSITVGPDNQTLVSEDIVHNLLHLISNTGPTIECKLLQVLVGLTSSPTTVLSVVSAIKSSGATISLVQFVEAPQNDLRLASIELIQNLSPHMGHELADALRGAVGQLGSLIRVISENVGISKEQAAAVGLLAELPERDLGLTRQMLDEGAFGLIFSRVKSIQLGETRGSRFVTPFLEGLLSVLARVTFVLSDEPDAIALCCEHNLAALFIELLQSNGLDKVQMVSATALENLSLESKNLTKLPELPPSGFCASIFPCFSKQPVITGLCRLHRGLCSLKETFCLLEGHAVEKLIALLDHTNEKVVEASLAALSTVIDDGVDIEQGVMVLCEAQGIKPILDVLLEKRTENLQRRAVWVVERILRTDDIAYEVSGDPNVSTALVDAFQHADYRTRQIAERALKHIDKIPNFSGIFPNMG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
U-box domain-containing protein 43	Functions as an E3 ubiquitin ligase.	probable	Q9SFX2

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2JDQ, chain A
Confidence level:very confident
Coverage over the Query: 3-317,328-408,434-474
View the alignment between query and template
View the model in PyMOL

Template: 2JDQ, chain A
Confidence level:very confident
Coverage over the Query: 38-317,328-394,434-520
View the alignment between query and template
View the model in PyMOL

Template: 2Z6H, chain A
Confidence level:very confident
Coverage over the Query: 3-393,435-562
View the alignment between query and template
View the model in PyMOL

Template: 3GRL, chain A
Confidence level:confident
Coverage over the Query: 37-397,409-565
View the alignment between query and template
View the model in PyMOL

Template: 3OQS, chain A
Confidence level:probable
Coverage over the Query: 5-401,436-471
View the alignment between query and template
View the model in PyMOL