Citrus Sinensis ID: 008261

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570--
MAQPRKLFLALFAVVLVVTAVVTIIATRKNNSSNTNDEHIAAHAHAYAQPVIRSSCSATLYPELCFSALSAAPAAAVSKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQATTVVPDVTVAADGSGNYLTVAAAVAAAPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFIGDGRSTTIITGSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL
cccccEEHHHHHHHHHHHHHHHHHHEEccccccccccccccccccccccHHHHcccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHcccccccEEEEEEEccEEEEEEEEccccccEEEEECcccccEEEcccccccccccccccCEEECcccCEEEccEEEEccccccccEEEEEEcccEEEEEccEEEccccccccccccEEEEccEEEEcccEEEcccEEEEcccEEEECccccccccEEEEcccccccccCEEEEEccEEccccccccccccccccccccccccccEEEEccccccccccccccccccccccccCEEEEEcccccccccccccccccccccccHHHHHccccccccccccccccccccccccc
****RKLFLALFAVVLVVTAVVTIIATR********************QPVIRSSCSATLYPELCFSALSAA********NSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGY************ADELKILVSAAMTNQETCLDGFSHER****IREELMEGQMHVFHMCSNALAMIKNMTDGD******************TKWPEWLSAGDRRLLQATTVVPDVTVAADGSGNYLTVAAAVAAAPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFIGDGRSTTIITGSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL
xxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAQPRKLFLALFAVVLVVTAVVTIIATRKNNSSNTNDEHIAAHAHAYAQPVIRSSCSATLYPELCFSALSAAPAAAVSKVNSPKDVIRLSLNLTITAVQHNYFAIKKLITTRKSTLTKREKTSLHDCLEMVDETLDELYKTEHELQGYPAAANNKSIAEQADELKILVSAAMTNQETCLDGFSHERADKKIREELMEGQMHVFHMCSNALAMIKNMTDGDIGKDIVDHYSKARRLDDETKWPEWLSAGDRRLLQATTVVPDVTVAADGSGNYLTVAAAVAAAPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFIGDGRSTTIITGSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVLQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITNAAEAQTYTAANFIAGSTWLGSTGFPFSLGL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pectinesterase/pectinesterase inhibitor 3 Acts in the modification of cell walls via demethylesterification of cell wall pectin.probableO49006
Pectinesterase/pectinesterase inhibitor U1 Acts in the modification of cell walls via demethylesterification of cell wall pectin.probableQ43143

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.11Pectinesterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GQ8, chain A
Confidence level:very confident
Coverage over the Query: 257-572
View the alignment between query and template
View the model in PyMOL
Template: 1XG2, chain B
Confidence level:very confident
Coverage over the Query: 47-148,160-217
View the alignment between query and template
View the model in PyMOL