Citrus Sinensis ID: 008315
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | 2.2.26 [Sep-21-2011] | |||||||
| Q9XGY7 | 493 | Alcohol-forming fatty acy | N/A | no | 0.847 | 0.979 | 0.558 | 1e-161 | |
| Q93ZB9 | 493 | Fatty acyl-CoA reductase | yes | no | 0.838 | 0.969 | 0.525 | 1e-153 | |
| Q9LXN3 | 493 | Probable fatty acyl-CoA r | no | no | 0.833 | 0.963 | 0.501 | 1e-142 | |
| Q39152 | 491 | Fatty acyl-CoA reductase | no | no | 0.840 | 0.975 | 0.504 | 1e-141 | |
| Q0WRB0 | 496 | Probable fatty acyl-CoA r | no | no | 0.838 | 0.963 | 0.493 | 1e-136 | |
| Q1PEI6 | 496 | Fatty acyl-CoA reductase | no | no | 0.833 | 0.957 | 0.481 | 1e-129 | |
| Q08891 | 616 | Fatty acyl-CoA reductase | no | no | 0.835 | 0.772 | 0.39 | 1e-91 | |
| Q9FMQ9 | 409 | Putative fatty acyl-CoA r | no | no | 0.610 | 0.850 | 0.418 | 5e-83 | |
| B9TSP7 | 548 | Fatty acyl-CoA reductase | no | no | 0.803 | 0.835 | 0.350 | 7e-81 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | yes | no | 0.749 | 0.829 | 0.266 | 1e-42 |
| >sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/491 (55%), Positives = 361/491 (73%), Gaps = 8/491 (1%)
Query: 2 ELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNE 61
E+GS++EFL+NK ILV+G TG +AK+F+EK+LR QPNVKKLYLL+RA D E+AALR QNE
Sbjct: 3 EMGSILEFLDNKAILVTGATGSLAKIFVEKVLRSQPNVKKLYLLLRATDDETAALRLQNE 62
Query: 62 VLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSA 121
V K+LF VLK+ G SF+SEK+T V GDI+ EDL LKD NLKEE+W E+DV+VN A
Sbjct: 63 VFGKELFKVLKQNLGANFYSFVSEKVTVVPGDITGEDLCLKDVNLKEEMWREIDVVVNLA 122
Query: 122 AITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A F ERYDV+ INT GA ++++FAKKC KLK+FVHVSTAYV+GE+ GLILE P
Sbjct: 123 ATINFIERYDVSLLINTYGAKYVLDFAKKCNKLKIFVHVSTAYVSGEKNGLILEKPYYMG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235
L+G GLD + E K+++ K+NEL+ GA +K I MK++G ERA+ GWPN YVFTK
Sbjct: 183 ESLNGRLGLDINVEKKLVEAKINELQAAGATEKSIKSTMKDMGIERARHWGWPNVYVFTK 242
Query: 236 TMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295
+GEM++ Q K ++ L IIRPTI++ T+KEPFPGWVE ++TI+ + V +G L C++
Sbjct: 243 ALGEMLLMQYKGDIPLTIIRPTIITSTFKEPFPGWVEGVRTIDNVPVYYGKGRLRCMLCG 302
Query: 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPS-DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
TI+D+IP DMVVNA IVAMVAHA Q + YHVGSS NP+ L ++ + YFTK
Sbjct: 303 PSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTK 362
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
PWIN P+ V + ++FSS ++FH Y+ + +LLPLK L++ANT+F +FKG Y DL++
Sbjct: 363 NPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKVLEIANTIFCQWFKGKYMDLKR 422
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K + ++R+ +IYKPY +F GIFDD NTEKLR+ K S E D+FYFDP +I W DYF+ T
Sbjct: 423 KTRLLLRLVDIYKPYLFFQGIFDDMNTEKLRIAAKESIVEADMFYFDPRAINWEDYFLKT 482
Query: 475 HIPG-VENILQ 484
H PG VE++L
Sbjct: 483 HFPGVVEHVLN 493
|
NADPH-dependent alcohol-forming fatty acyl-coenzyme A reductase that catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The recombinant enzyme accepts saturated and mono-unsaturated fatty acyl-CoAs of 16 to 22 carbons. Simmondsia chinensis (taxid: 3999) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 8EC: 4 |
| >sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 543 bits (1400), Expect = e-153, Method: Compositional matrix adjust.
Identities = 255/485 (52%), Positives = 353/485 (72%), Gaps = 7/485 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
ME+ SV+++L+NK ILV G GF+A +F+EKILRV PNVKKLYLL+RA+ +SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E+L KDLF VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLGA++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K MGEM++ +ENLSLV++RP+I++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + DV+P DMVVN+++V+M A A + + IYHVGSSLRNP+ + + YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
KPW NK+GK ++V I + SS+ SFH YM I YL+ LKGL+L N + F+ + K
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNK 423
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K+ F+ R+ ++Y+PY +F GIFDD+NTEKLR + E ++FYFDP ++W DYF+NT
Sbjct: 424 KINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNT 483
Query: 475 HIPGV 479
H+ G+
Sbjct: 484 HVIGL 488
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C24:0 and C26:0. May be unable to use saturated and monounsaturated C16 and C18 acyl-CoA as substrates. Involved in cuticular wax formation. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/483 (50%), Positives = 336/483 (69%), Gaps = 8/483 (1%)
Query: 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLA 64
+ ++FL +K ILV+GV GF+AKVF+EKILR+QP VKKL+LL+RAAD ESA RF +EVL
Sbjct: 4 NCIQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLE 63
Query: 65 KDLFNVLKEKWGTR-LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123
KDLF VLK G L +FI+EK+ + GDIS ++LG+K S+L + +WNE+D++VN AA
Sbjct: 64 KDLFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILE------NP 177
T FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E
Sbjct: 124 TNFDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237
L+G L + EM+++ QKL EL+ + ++EI+ MK+LG RAK+HGWPNTYVFTK+M
Sbjct: 184 LNGHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSM 243
Query: 238 GEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETK 297
GEM++ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L C + +
Sbjct: 244 GEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPN 303
Query: 298 TIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357
+++D+IPVDMV NAM+ A HA + +YHVGSS +NP+T I D YFTK P
Sbjct: 304 SVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPL 363
Query: 358 INKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKKVK 417
+ + G I VSK + S++A F YM + Y LPL+ L+L ++ + Y D+ +K+K
Sbjct: 364 VRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIK 423
Query: 418 FVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTET-DLFYFDPDSIEWRDYFMNTHI 476
MR+ ++Y+PY F GIFDDTNTEKLR+ K E LF FDP SI+W DY HI
Sbjct: 424 LAMRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHI 483
Query: 477 PGV 479
PG+
Sbjct: 484 PGL 486
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/490 (50%), Positives = 340/490 (69%), Gaps = 11/490 (2%)
Query: 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLA 64
+ V+FL NK IL++G GF+AKV +EKILR+QPNVKK+YLL+RA D +SA R ++EV+
Sbjct: 4 NCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRSEVME 63
Query: 65 KDLFNVLKEKWGT-RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123
DLF VL+ G LN+ + EKI V GDIS ++LGLKD++L + +W+E+D+++N AA
Sbjct: 64 IDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIINIAAT 123
Query: 124 TKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------ 177
T FDERYD+ GINT GA++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFKMGET 183
Query: 178 LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237
L G LD + E ++ QKL EL+ +EI+ MK+ G RAK+HGWPNTYVFTK M
Sbjct: 184 LSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVFTKAM 241
Query: 238 GEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETK 297
GEM+M + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L C + ++
Sbjct: 242 GEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFLADSN 301
Query: 298 TIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357
++ D+IP DMVVNAM+ A AH+ IYHVGSS +NPVT + D+ YF K+P
Sbjct: 302 SVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPL 361
Query: 358 INKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKKVK 417
I + G PI V K + S++A F YM + Y LPL+ L+L N V+ Y+DL +K+K
Sbjct: 362 IGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLSRKIK 421
Query: 418 FVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETD-LFYFDPDSIEWRDYFMNTHI 476
MR+ E+Y+PY F GIFDD NTE+LRM K + E D F FDP SI+W +Y NTHI
Sbjct: 422 LAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYITNTHI 481
Query: 477 PG-VENILQQ 485
PG + ++L+Q
Sbjct: 482 PGLITHVLKQ 491
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/490 (49%), Positives = 331/490 (67%), Gaps = 12/490 (2%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MEL + V+FL NK ILV+G TGF+AKVF+EKILRVQPNVKKLYLL+RA+D E+A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDLFNVLKEKWG-TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVN 119
EV K+LF VL++ G +LN+ + EK+ V GDI+++ LG+ DS+L+E + E+D++VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYDV GINT GA++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232
+ LD + E +++ Q+L EL + +++ITL MK LG ERAK+HGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292
FTK+MGEM++ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + ++ D+IPVDMV NAMI A HA +YHVGSS +NPVT I + YF
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYF 359
Query: 353 TKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDL 412
TK P ++ G I VSK+ ++A F YM + Y LPL+ L+L + ++ Y D
Sbjct: 360 TKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDK 419
Query: 413 RKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSR---TETDLFYFDPDSIEWRD 469
+K++ VMR+ E+Y+PY F GIFDD NT+ L K TE +F FDP I W D
Sbjct: 420 NRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGD 479
Query: 470 YFMNTHIPGV 479
Y N HI G+
Sbjct: 480 YLTNIHISGL 489
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/486 (48%), Positives = 327/486 (67%), Gaps = 11/486 (2%)
Query: 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLA 64
S V FL+NK ILV+G TGF+AKVF+EKILRVQPNV KLYL++RA+D E+A R + E
Sbjct: 4 SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRTEAFE 63
Query: 65 KDLFNVLKEKWG-TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123
KDLF VL++ G +LN+ +SEK+ VAGDI+ + LG+KDSNL+E + E+D++VN AA
Sbjct: 64 KDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVNVAAT 123
Query: 124 TKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----- 178
T FDERYD+ GINT GA++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 124 TNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFVMEEI 183
Query: 179 --DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAK+HGWPNTYVFTK+
Sbjct: 184 CNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYVFTKS 243
Query: 237 MGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGET 296
MGEM++ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L C + +
Sbjct: 244 MGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDV 303
Query: 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
++ D+IP DMV NAMI A HA +Y VGSS +NP+ I + F YFTK
Sbjct: 304 NSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNS 363
Query: 357 WINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKKV 416
++ G I VSK+ L ++A F YM I Y LP++ L+L + ++ + Y + +K+
Sbjct: 364 LRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKI 423
Query: 417 KFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTK---GSRTETDLFYFDPDSIEWRDYFMN 473
VMR+ ++Y+PY F GIFDD NT+ L K +E +F FDP I+W+DY +N
Sbjct: 424 DMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKDYLIN 483
Query: 474 THIPGV 479
HIPG+
Sbjct: 484 VHIPGL 489
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 295/500 (59%), Gaps = 24/500 (4%)
Query: 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAK 65
++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YLLI+A E+A R +NEVL
Sbjct: 124 IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDA 183
Query: 66 DLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK 125
+LFN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+DV++NSAA T
Sbjct: 184 ELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAANTT 242
Query: 126 FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-------- 177
F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 243 FNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIA 302
Query: 178 ----LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +TYV
Sbjct: 303 TENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYV 358
Query: 233 FTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292
FTK MGEM++ ++ ++ +VIIRP+++ TYK+PFPGW+E + ++ + + +G L
Sbjct: 359 FTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGF 418
Query: 293 VGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA----NIYHVGSSLRNPVTLVSILDYG 348
+ + K ++DV+P DMVVNA + A+ H SD N+Y + SS NP+ + +
Sbjct: 419 LVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELL 478
Query: 349 FVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGV 408
+ ++ P ++ +G PI V + LF+S+ F ++ + ++V + +
Sbjct: 479 YNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLWRDAQERSGLMSGMSSVDSKMMQKL 538
Query: 409 YNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWR 468
+K V+ +A IY+PY ++ G FD++NT+ R+ S E F FD SI W
Sbjct: 539 KFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQ--RLMENMSEDEKREFGFDVGSINWT 596
Query: 469 DYFMNTHIPGVENILQQKRA 488
DY N HIPG+ + + RA
Sbjct: 597 DYITNVHIPGLRRHVLKGRA 616
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Involved in the synthesis of the lipid component in sporopollenin. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 225/375 (60%), Gaps = 27/375 (7%)
Query: 113 ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
L ++V ++ ++RYDVA GINT GAI+++NFAKKCVK K+ +HVST YV GER G
Sbjct: 40 RLYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGH 99
Query: 173 ILE------NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226
I+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+++G
Sbjct: 100 IVEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYG 159
Query: 227 WPNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ 286
WPNTYVFTK MGEM++ +E + +VIIRPTI++ T+ +PFPGW+E LKT++++ + +
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGK 219
Query: 287 GNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
G L C + + KT+ D+IPVDMVVNAMI H +YHVGSS +NPV I +
Sbjct: 220 GILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYE 279
Query: 347 YGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTV------ 400
YF K P + + G I V K+ S++A F Y + Y LP++ L L + +
Sbjct: 280 MMSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQRD 338
Query: 401 ---FHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDL 457
HN +K K MR+ ++YKPY F GIFDD N E LR+ + E L
Sbjct: 339 KFALHN----------RKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDME-KL 387
Query: 458 FYFDPDSIEWRDYFM 472
F +P I+W DYFM
Sbjct: 388 FGTNPKCIDWEDYFM 402
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana GN=FAR6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 301 bits (772), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/493 (35%), Positives = 278/493 (56%), Gaps = 35/493 (7%)
Query: 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAK 65
+V FLE K LV+G TGF+AKV IEK+LR + K++LL+R+ D ESA R +E+++
Sbjct: 77 IVRFLEGKSYLVTGATGFLAKVLIEKLLRESLEIGKIFLLMRSKDQESANKRLYDEIISS 136
Query: 66 DLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK 125
DLF +LK+ G+ +F+ K+ V GDI ++LG+K S + + E+DV+++ T
Sbjct: 137 DLFKLLKQMHGSSYEAFMKRKLIPVIGDIEEDNLGIK-SEIANMISEEIDVIISCGGRTT 195
Query: 126 FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL----DGA 181
FD+RYD A +N LG L++F K C KLK+F+H STAYV G+R G +LE PL +
Sbjct: 196 FDDRYDSALSVNALGPGRLLSFGKGCRKLKLFLHFSTAYVTGKREGTVLETPLCIGENIT 255
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241
S L+ +E+K+ + + + + + +K +K LG ERA+ +GW N+Y FTK +GE +
Sbjct: 256 SDLNIKSELKLASEAVRKFRGREEIKK-----LKELGFERAQHYGWENSYTFTKAIGEAV 310
Query: 242 MQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301
+ + NL +VIIRP+I+ +Y EPFPGW++ + + + +A A+G + + +++MD
Sbjct: 311 IHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQISDFWADPQSLMD 370
Query: 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLR-NPVTLVSILDYGFVYFTKKPWINK 360
+IPVDMV NA I AM H + +Y++ SS NP+ ++D + P
Sbjct: 371 IIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLCDFPL--- 427
Query: 361 QGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANT------VFHNFFKGVYNDLRK 414
+ I++ + + SS+ F L+NT V N G+ ++
Sbjct: 428 EETVIDLEHMKIHSSLEGFTS-------------ALSNTIIKQERVIDNEGGGLSTKGKR 474
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K+ + + +A+ Y+PY +F FD+TNT L + S E F FD I+W Y +N
Sbjct: 475 KLNYFVSLAKTYEPYTFFQARFDNTNTTSL--IQEMSMEEKKTFGFDIKGIDWEHYIVNV 532
Query: 475 HIPGVENILQQKR 487
H+PG++ K+
Sbjct: 533 HLPGLKKEFLSKK 545
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. May be involved in the generation of C30 primary alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 229/476 (48%), Gaps = 49/476 (10%)
Query: 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLA 64
S+ E+ E K +L++G TGF+ KV +EK+LR P VK +Y+L+R ++ R + E+ +
Sbjct: 3 SIPEYYEGKNVLLTGATGFMGKVLLEKLLRSCPKVKAVYVLVRPKAGQTPEARIE-EITS 61
Query: 65 KDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124
LF+ L+E+ EKI + +++ +L L + +KE+L ++++ + AA
Sbjct: 62 CKLFDRLREE-----QPDFKEKIIVITSELTQPELDLSNP-VKEKLIECINIIFHCAATV 115
Query: 125 KFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL---ILENPLDGA 181
+F+E A +N L L++ A++ L+VF+HVSTAY R + + P+D
Sbjct: 116 RFNETLRDAVQLNVLSTKQLLSLAQQMTNLEVFMHVSTAYAYCNRKHIEEVVYPPPVDPK 175
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241
+D M D +N++ K L +R PNTY +TK + E +
Sbjct: 176 KLMDSLEWMD--DSLVNDITPK-------------LIGDR------PNTYTYTKALAEYV 214
Query: 242 MQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301
+QQ L+ IIRP+IV ++KEPFPGW+++ + LF+A+ +G L + + D
Sbjct: 215 VQQEGARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNGAVAD 274
Query: 302 VIPVDMVVN-AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINK 360
++PVD+VVN + A + +P + +Y+ + NP + + F + P
Sbjct: 275 LVPVDVVVNMTLAAAWYSGVNRPRNIMVYNCTTGGTNPFHWSEVEYHVISTFKRNPLEQA 334
Query: 361 QGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKKVKFVM 420
+P + L S+ +H ++ + + P ++ + + + +K +
Sbjct: 335 FRRP----NVNLTSNHLLYHYWIAVSHKAP--------AFLYDIYLRITGRSPRMMKTIT 382
Query: 421 RV--AEIYKPYFYFNGIFDDTNTEKLRM-TTKGSRTETDLFYFDPDSIEWRDYFMN 473
R+ A ++ YF N NTE + M + S + F FD + W +Y N
Sbjct: 383 RLHKAMVFLEYFTSNSWI--WNTENMTMLMNQLSPEDKKTFNFDVRQLHWAEYMEN 436
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | ||||||
| 356550111 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.838 | 0.975 | 0.606 | 1e-178 | |
| 356543580 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.838 | 0.975 | 0.595 | 1e-176 | |
| 225436689 | 490 | PREDICTED: fatty acyl-CoA reductase 3 [V | 0.838 | 0.975 | 0.597 | 1e-173 | |
| 225436687 | 490 | PREDICTED: fatty acyl-CoA reductase 3 is | 0.836 | 0.973 | 0.599 | 1e-173 | |
| 356542728 | 493 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.840 | 0.971 | 0.595 | 1e-173 | |
| 388491432 | 492 | unknown [Medicago truncatula] | 0.836 | 0.969 | 0.586 | 1e-173 | |
| 357453013 | 492 | Fatty acyl-CoA reductase [Medicago trunc | 0.836 | 0.969 | 0.584 | 1e-172 | |
| 356541412 | 523 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.840 | 0.915 | 0.589 | 1e-171 | |
| 356550115 | 490 | PREDICTED: fatty acyl-CoA reductase 3-li | 0.838 | 0.975 | 0.583 | 1e-171 | |
| 388500498 | 492 | unknown [Medicago truncatula] | 0.838 | 0.971 | 0.582 | 1e-170 |
| >gi|356550111|ref|XP_003543433.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/485 (60%), Positives = 374/485 (77%), Gaps = 7/485 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
ME+GSV+ FLE+K IL+ G TGF+AK+F+EKILRVQPNVKKL+LL+RA+D +SA R QN
Sbjct: 1 MEVGSVLNFLEDKTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E++AKDLF VLKEK G SFISEK+T V GDIS EDLGLKDS L+EE+ N+ DV+VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLKDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYD+A G+N G H++NFAK+C KLKV +HVSTAYV GER GLILE P
Sbjct: 121 AATTNFDERYDIALGLNIFGVKHVMNFAKQCTKLKVVLHVSTAYVCGERGGLILEEPYNF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+G SGLD DAE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIDAERTIVCDKLDELREQGATEREIKIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K +GEM+++Q K LS+VI+RPTIV+ T +EPFPGWVE ++TI++L V +G L C +G
Sbjct: 241 KAVGEMLVEQLKGRLSVVIMRPTIVTSTLREPFPGWVEGVRTIDSLAVTYGKGKLTCFLG 300
Query: 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
++D +P DMVVNAM+VAMVAHA QPSD IYHVGSSLRNP+T +++ DYG YFT
Sbjct: 301 NINGVVDAVPADMVVNAMLVAMVAHANQPSDI-IYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
KPWINK G P++V ++ + + + SF YM I YLLPLKGL+LANT +F+G Y +L +
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHR 419
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K++ VMR+ E+Y+PY +FNG+FDD NTEKLR+ K S TETDLFYFD + W DYFM T
Sbjct: 420 KIQVVMRMVELYRPYMFFNGVFDDINTEKLRIAAKQSGTETDLFYFDTKEVNWEDYFMKT 479
Query: 475 HIPGV 479
H+PG+
Sbjct: 480 HLPGI 484
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356543580|ref|XP_003540238.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 289/485 (59%), Positives = 376/485 (77%), Gaps = 7/485 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
ME+GSV+ FL+++ IL+ G TGF+AK+F+EKILRVQPNVKKL+LL+RA+D +SA R QN
Sbjct: 1 MEVGSVLNFLQDRTILIVGATGFLAKIFLEKILRVQPNVKKLFLLLRASDAKSANYRLQN 60
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E++AKDLF VLKEK G SFISEK+T V GDIS EDLGL DS L+EE+ N+ DV+VN
Sbjct: 61 EIIAKDLFIVLKEKLGANFKSFISEKVTLVPGDISYEDLGLTDSILREEICNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYD+A G+N G H++ FAK+C KLK+ +HVSTAYV GER GLILE+P
Sbjct: 121 AATTKFDERYDLALGLNIFGVKHVMKFAKQCAKLKILLHVSTAYVCGERGGLILEDPYHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+G SGLD +AE ++ KL+EL+ +GA ++EI + MKNLG RAK++GWPNTYVFT
Sbjct: 181 GDSLNGVSGLDIEAERTIVCDKLDELREQGATEREIEIAMKNLGISRAKVYGWPNTYVFT 240
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K +GEM+++Q K +LS+VI+RPTIV+ T +EPFPGW E ++TI++L V +G L C +G
Sbjct: 241 KAVGEMLVEQLKGSLSVVIMRPTIVTSTLREPFPGWAEGVRTIDSLAVTYGKGKLKCFLG 300
Query: 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
++DV+P DMVVNAM+VAMVAHAKQPSD +YHVGSSLRNP+T +++ DYG YFT
Sbjct: 301 NINGVVDVVPADMVVNAMLVAMVAHAKQPSDI-VYHVGSSLRNPLTYLNLQDYGLKYFTA 359
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
KPWINK G P++V ++ + + + SF YM I YLLPLKGL+LANT +F+G Y +L +
Sbjct: 360 KPWINKDGTPVKVGRVTVLTDMDSFQRYMFIRYLLPLKGLELANTALCQYFRGTYLELHR 419
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K++ VMR+ E+Y+PY +F+G+FDD NTEKLRM K S TETDLFYFD + W DYFM T
Sbjct: 420 KIQVVMRMVELYRPYMFFDGVFDDMNTEKLRMAAKQSGTETDLFYFDTKEVNWDDYFMKT 479
Query: 475 HIPGV 479
H+PG+
Sbjct: 480 HLPGI 484
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436689|ref|XP_002263184.1| PREDICTED: fatty acyl-CoA reductase 3 [Vitis vinifera] gi|296084945|emb|CBI28354.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/485 (59%), Positives = 373/485 (76%), Gaps = 7/485 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MELGS+VEFLENK ILV+G TGF+AK+F+EKILR+QPNVKKL+LL+RAADT+SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVEKILRIQPNVKKLFLLLRAADTKSATQRLHN 60
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
EVL K+LF VLK+KWG+ LNSFISEK+T + GDIS E+LG+ + NL+EE+W E+DV++N
Sbjct: 61 EVLGKELFRVLKDKWGSNLNSFISEKVTPIPGDISCENLGVTNLNLREEIWREVDVILNL 120
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLGA H++NF+KKCVKLK+ +HVSTAYV+GER GLILE+P
Sbjct: 121 AATTKFDERYDVALGINTLGASHVLNFSKKCVKLKMLLHVSTAYVSGEREGLILESPLKM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+GASGLD D E K++++ LNEL A ++ I+L MK LG +RA ++GWPNTYVFT
Sbjct: 181 GKALNGASGLDVDKEKKLVEEGLNELNELQATEETISLTMKELGMKRALMYGWPNTYVFT 240
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K MGEM++ Q KENL LVI+RPTI++ TY EPF GW+E ++TI+ + +G L CL+
Sbjct: 241 KAMGEMLLGQFKENLPLVILRPTIITSTYMEPFSGWIEGIRTIDNVLAGYCKGKLTCLLA 300
Query: 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + I+D IP DMVVN MIVAMVAHA QP + IY VGSSL+NP+ L+ + D+ F YF +
Sbjct: 301 DPECILDAIPGDMVVNCMIVAMVAHANQPCEI-IYQVGSSLKNPLKLLDLHDFFFKYFHE 359
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
PWINK GK ++VSK+ILFS+ FHGY+ + Y+LPLK LQ N + G+ D +
Sbjct: 360 NPWINKDGKAVKVSKLILFSTTFVFHGYLAVRYMLPLKVLQFLNFLLCQILCGMCTDHNR 419
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K+K +M + E+YKPY +F GIFDD NT+KLR+ S ++ DLFYFDP I+W DYF+N
Sbjct: 420 KIKMLMYLVELYKPYLFFKGIFDDLNTDKLRLAATESSSKADLFYFDPKCIDWEDYFINI 479
Query: 475 HIPGV 479
HIPGV
Sbjct: 480 HIPGV 484
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436687|ref|XP_002263127.1| PREDICTED: fatty acyl-CoA reductase 3 isoform 1 [Vitis vinifera] gi|296084944|emb|CBI28353.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/484 (59%), Positives = 376/484 (77%), Gaps = 7/484 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MELGS+VEFLENK ILV+G TGF+AK+F+E+ILR QPNVKKL+LL+RA DT+SA R N
Sbjct: 1 MELGSIVEFLENKSILVTGATGFLAKIFVERILRTQPNVKKLFLLLRAGDTKSATQRLHN 60
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
EV+ K+LF VL+EKW + NSF+S+K+T V GDIS +DLG+ DSNL+EE+W E+D++VN
Sbjct: 61 EVIGKELFWVLREKWASDFNSFVSKKLTPVPGDISCDDLGVTDSNLREEMWREVDIVVNL 120
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GIN LGA H+++FAKKCVK+K+ +HVSTAYVAGE++GLILE P
Sbjct: 121 AATTNFDERYDVALGINALGARHVLDFAKKCVKIKMLLHVSTAYVAGEQSGLILEQPFQM 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+G GLD + E K+++++L+EL+++GA ++ +TL MK+ G +RAK+HGWPNTYVFT
Sbjct: 181 GETLNGTFGLDIEEEKKLMEERLDELQSEGATREAVTLAMKDFGIQRAKMHGWPNTYVFT 240
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K MGEM++ KENL L I+RPTIVS TYKEPFPGWVE ++TI++ V +G L +G
Sbjct: 241 KAMGEMLLGHLKENLPLAILRPTIVSSTYKEPFPGWVEGIRTIDSFAVGYGKGRLTFFLG 300
Query: 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + I+DVIP DMVVN+MIVAM AHA QP + IY VGSS++NPV ++ D+G YFTK
Sbjct: 301 DIEAIVDVIPADMVVNSMIVAMAAHANQPCEV-IYQVGSSVKNPVRYSNLQDFGLRYFTK 359
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
PWINK GK ++V K+ + S++ SFH YM + YLL LKGLQ NT F +F+G Y DL +
Sbjct: 360 NPWINKDGKAVKVGKVTVLSTMDSFHRYMALRYLLLLKGLQFVNTAFCQYFRGTYTDLNR 419
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
++KF++R+ E+YKPY +F G+FDD NTEKLRM S E DLFYFDP I+W DYFMN
Sbjct: 420 RIKFLLRLIELYKPYLFFKGVFDDMNTEKLRMAVTASGAEADLFYFDPKCIDWEDYFMNI 479
Query: 475 HIPG 478
HIPG
Sbjct: 480 HIPG 483
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542728|ref|XP_003539817.1| PREDICTED: fatty acyl-CoA reductase 3-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/487 (59%), Positives = 373/487 (76%), Gaps = 8/487 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MELGS++ FL++K IL++G TGF+AKV +EKILRVQPNVKKLYLL+RAAD +SA R N
Sbjct: 1 MELGSILHFLQDKNILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLNN 60
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E++ KDLF VLKEK G NSF+S+K+T V GDIS EDLGL+DS L+EE++++ DV++N
Sbjct: 61 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 120
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT G +++NFAKKC KL+V VHVSTAYV GE R GLILE P
Sbjct: 121 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLEVLVHVSTAYVCGEGGREGLILEKPY 180
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAK++GWPNTYV
Sbjct: 181 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 240
Query: 233 FTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292
FTK MGEM+++Q K NLS+V IRPTIV+ T+KEPFPGW E ++TI++L VA +G L C
Sbjct: 241 FTKAMGEMLVEQLKGNLSVVTIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 300
Query: 293 VGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+G+ K I+D IP DMVVNA++VAMVAHA PSD IYHVGSS+R P+ ++ +YGF YF
Sbjct: 301 LGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYF 360
Query: 353 TKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDL 412
T KP INK G+P++V K+ + S++ SF YM I YLL LKGL+LANT F +F+G Y +L
Sbjct: 361 TAKPCINKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNL 420
Query: 413 RKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFM 472
+K++ VMR+ ++YKPY +F FDD NTEKLRM + ETDLFYFDP+ I+W DYF+
Sbjct: 421 NRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELIDWEDYFL 480
Query: 473 NTHIPGV 479
N H+PGV
Sbjct: 481 NIHLPGV 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388491432|gb|AFK33782.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 284/484 (58%), Positives = 374/484 (77%), Gaps = 7/484 (1%)
Query: 2 ELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNE 61
E+GS++ FLE K ILV G TGF+AK+F+EK+LRVQPNVKKL+LL+RA+D +SAA R QNE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSA 121
+LAKDLFN+L EK GT SFISEK+T V GDI+ EDLGLKDS L+E++ ++ DV++N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 AITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYD+A +NT G H+++FAK+C++LKV VHVSTAYV GE++GLILE+P
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235
L+G +GLD +AE K++ +KL EL+ KGA + EI + MK+LG RA ++GWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 236 TMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295
+GEM++++ K NLS+VI+RP IV+GT +EPFPGWVE L+TI+ L V +G L C +G+
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTGTLREPFPGWVEGLRTIDCLAVVYGKGKLTCFLGD 303
Query: 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
++D IP DMVVNAM+VAMVAHA QP D +YHVGSS+RNP+ S DYG YF K
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRDG-VYHVGSSVRNPLRYQSFHDYGLKYFKAK 362
Query: 356 PWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKK 415
PWINK G ++V K+ + +++ASF Y+ I YLLPLKGL+L NT +F+G Y +L +K
Sbjct: 363 PWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRK 422
Query: 416 VKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNTH 475
++ VMR+ E+Y+PY +F GIFDD NTEKLRM+ + S TE DLFYFDP ++W DYFMNTH
Sbjct: 423 IQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTH 482
Query: 476 IPGV 479
+PG+
Sbjct: 483 LPGL 486
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357453013|ref|XP_003596783.1| Fatty acyl-CoA reductase [Medicago truncatula] gi|355485831|gb|AES67034.1| Fatty acyl-CoA reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 283/484 (58%), Positives = 374/484 (77%), Gaps = 7/484 (1%)
Query: 2 ELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNE 61
E+GS++ FLE K ILV G TGF+AK+F+EK+LRVQPNVKKL+LL+RA+D +SAA R QNE
Sbjct: 4 EVGSILNFLEGKTILVIGATGFLAKIFLEKVLRVQPNVKKLFLLLRASDDKSAASRLQNE 63
Query: 62 VLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSA 121
+LAKDLFN+L EK GT SFISEK+T V GDI+ EDLGLKDS L+E++ ++ DV++N A
Sbjct: 64 ILAKDLFNLLNEKMGTNFKSFISEKLTVVPGDITFEDLGLKDSILREDISSQTDVIINLA 123
Query: 122 AITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYD+A +NT G H+++FAK+C++LKV VHVSTAYV GE++GLILE+P
Sbjct: 124 ATTNFDERYDIALDLNTFGVKHIMSFAKQCIRLKVLVHVSTAYVCGEKSGLILESPYLLG 183
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235
L+G +GLD +AE K++ +KL EL+ KGA + EI + MK+LG RA ++GWPNTYVFTK
Sbjct: 184 DSLNGVAGLDINAEKKLVTEKLGELQEKGATEHEIKVAMKDLGITRANVYGWPNTYVFTK 243
Query: 236 TMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295
+GEM++++ K NLS+VI+RP IV+ T +EPFPGWVE L+TI++L V +G L C +G+
Sbjct: 244 ALGEMLVEKLKGNLSVVILRPAIVTSTLREPFPGWVEGLRTIDSLAVVYGKGKLTCFLGD 303
Query: 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
++D IP DMVVNAM+VAMVAHA QP D +YHVGSS+RNP+ S DYG YF K
Sbjct: 304 INGVVDAIPADMVVNAMLVAMVAHANQPRDG-VYHVGSSVRNPLRYQSFHDYGLKYFKAK 362
Query: 356 PWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKK 415
PWINK G ++V K+ + +++ASF Y+ I YLLPLKGL+L NT +F+G Y +L +K
Sbjct: 363 PWINKDGTVVKVGKMTILTNMASFQRYIFIRYLLPLKGLKLVNTALCQYFQGTYLELNRK 422
Query: 416 VKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNTH 475
++ VMR+ E+Y+PY +F GIFDD NTEKLRM+ + S TE DLFYFDP ++W DYFMNTH
Sbjct: 423 IQVVMRLVELYRPYLFFKGIFDDLNTEKLRMSARQSGTEIDLFYFDPKEMDWEDYFMNTH 482
Query: 476 IPGV 479
+PG+
Sbjct: 483 LPGL 486
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541412|ref|XP_003539171.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/487 (58%), Positives = 371/487 (76%), Gaps = 8/487 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MELGS++ FL++K IL++G TGF+AKV +EKILRVQPNVKKLYLL+R D +SA R N
Sbjct: 31 MELGSILHFLQDKSILITGATGFLAKVLLEKILRVQPNVKKLYLLLRTEDAKSATHRLHN 90
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E++ KDLF VLKEK G NSF+S+K+T V GDIS EDLGL+DS L+EE++++ DV++N
Sbjct: 91 EIIGKDLFRVLKEKLGANFNSFVSKKLTLVPGDISREDLGLEDSILREEIYDQTDVIINL 150
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE--RTGLILENP- 177
AA T FDERYD++ G+NT G +++NFAKKC KLKV VHVSTAYV GE R GLILE P
Sbjct: 151 AATTNFDERYDISLGLNTFGVKYVINFAKKCTKLKVLVHVSTAYVCGEGGREGLILEKPY 210
Query: 178 -----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232
L+G SGLD +AE KV+ KL+EL+ GA +KEI MK+LG RAK++GWPNTYV
Sbjct: 211 HLGDSLNGVSGLDINAEEKVVRDKLSELQQLGATEKEIKEVMKDLGISRAKLYGWPNTYV 270
Query: 233 FTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292
FTK MGEM+++Q K NLS+VIIRP+IV+ T KEPFPGW E ++TI++L VA +G L C
Sbjct: 271 FTKAMGEMLVEQLKGNLSVVIIRPSIVTSTLKEPFPGWAEGVRTIDSLAVAYGKGKLTCF 330
Query: 293 VGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+G+ K I+D IP DMVVNA++VAMVAHA +PSD IYH+GSS+R P+ + +YGF YF
Sbjct: 331 LGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSVRRPLRYGKLQEYGFRYF 390
Query: 353 TKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDL 412
T KP I+K G+P++V K+ + S++ SF YM I YLL LKGL+LANT F +F+G Y DL
Sbjct: 391 TAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLDL 450
Query: 413 RKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFM 472
+K++ VMR+ ++YKPY +F FDD NTEKLRM + ETDLFYFDP+ I+W DYF+
Sbjct: 451 NRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAGRQGGVETDLFYFDPELIDWEDYFL 510
Query: 473 NTHIPGV 479
N H+PG+
Sbjct: 511 NIHLPGM 517
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550115|ref|XP_003543435.1| PREDICTED: fatty acyl-CoA reductase 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 283/485 (58%), Positives = 370/485 (76%), Gaps = 7/485 (1%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MELGS++ FL++K ILV+G TGF+AK+F+EKILRVQPNVKKLYLL+RA DTESA R
Sbjct: 1 MELGSIIHFLQDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRARDTESATQRLHA 60
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E++ KDLF +LKEK GTR NS++SEK+T V GDIS EDL LKD L EE++N+ DV+VN
Sbjct: 61 EIIGKDLFRLLKEKLGTRFNSYVSEKLTVVPGDISQEDLNLKDPILGEEIFNQTDVIVNL 120
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA T FDERYDVA GINTLG +H+++FAKKCVKLKV +HVSTAYV GE+ GLILE+P
Sbjct: 121 AATTNFDERYDVALGINTLGVMHVLSFAKKCVKLKVLIHVSTAYVCGEKEGLILEDPHHF 180
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+G GLD D E K ++QKL +L+ +GA + +I L MK+LG+ERAK++GW NTYVFT
Sbjct: 181 GVSLNGVPGLDIDMEKKNVEQKLIQLREEGATEHDIELAMKDLGSERAKMYGWANTYVFT 240
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K MGEM++ +K N+++VI+RPT+V+ T+ EPFPGW+E L+TI+++ VA +G L C +
Sbjct: 241 KAMGEMLVGTTKGNMNVVIVRPTMVTSTHTEPFPGWIEGLRTIDSIVVAYGKGKLACFLA 300
Query: 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
K + DVIP DMVVN M+VAMVAHA QPSD IYH+GSS+ NPV +++ DY YF +
Sbjct: 301 NLKAVFDVIPADMVVNTMLVAMVAHANQPSDI-IYHLGSSVVNPVKYLNLRDYSVRYFME 359
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
PWINK GKP++V K+ + S++ SF YM I YLLPLKGL+L N V +F+ +Y D +
Sbjct: 360 NPWINKDGKPVKVGKVTILSNMDSFRKYMYIRYLLPLKGLELVNAVSCQYFQKMYLDFNR 419
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K++ VMR+ E+YKPY +FNG+FD+ NTEKL + + ET+ FYFDP I+W DYF+N
Sbjct: 420 KIRTVMRLVELYKPYLFFNGVFDNMNTEKLLSSARQGGVETEFFYFDPKMIDWEDYFINI 479
Query: 475 HIPGV 479
H PG+
Sbjct: 480 HFPGI 484
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388500498|gb|AFK38315.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/484 (58%), Positives = 361/484 (74%), Gaps = 6/484 (1%)
Query: 2 ELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNE 61
+ GS+ FLE+K +LV G GF+AK+F+EKILRVQPNVKKLYLL+RA D ESA R NE
Sbjct: 3 QFGSIAHFLEDKNVLVLGAAGFLAKIFVEKILRVQPNVKKLYLLLRATDAESATRRMHNE 62
Query: 62 VLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSA 121
+L KDLF +LKE G + NSFISEK+T V GDIS E+ LKDSNL +EL+N+ DV+VN A
Sbjct: 63 ILRKDLFKLLKENHGAKFNSFISEKVTMVPGDISQENFNLKDSNLLQELYNKTDVIVNLA 122
Query: 122 AITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA G+NT GA H++NFAK C+ L+V VHVSTAYV GER GLI+E+P
Sbjct: 123 ATTNFDERYDVALGLNTFGAKHVLNFAKNCINLRVLVHVSTAYVCGERGGLIVEDPYQLG 182
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235
L+G GLD D E +V+++KLN L+ +GA +K+ + MK+LG ERAK++GWPNTYVFTK
Sbjct: 183 VSLNGVQGLDIDEEKRVVEEKLNMLQQEGATEKDTRIAMKDLGMERAKLYGWPNTYVFTK 242
Query: 236 TMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295
MGEM++ KE LS+VI+RPTI++ TYKEPFPGWVE ++TI++L VA +G L C + +
Sbjct: 243 AMGEMLVGTMKEKLSIVIVRPTIITSTYKEPFPGWVEGVRTIDSLIVAYGKGKLTCFLAD 302
Query: 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
+ + DVIP DMVVNAM+VAMV+HA QP D +IYHVGSS+ NPV S+ DY F YFT K
Sbjct: 303 LEAVFDVIPADMVVNAMLVAMVSHANQPCDDSIYHVGSSVGNPVRYESLRDYCFRYFTAK 362
Query: 356 PWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKK 415
P +K+GK I+V K+ + ++ SF YM I YLLPLKGL+L N F +F+ D+ +K
Sbjct: 363 PCFDKEGKAIKVGKVTVLENMNSFQRYMYIRYLLPLKGLELVNAAFCRYFQSTCFDISRK 422
Query: 416 VKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNTH 475
V VMR+ E+Y+PY +FNG+FD+ N EKL++ + S E DLFYFDP I W DYFMN H
Sbjct: 423 VHTVMRLVELYRPYVFFNGVFDNMNAEKLQIAARQSGVEMDLFYFDPKMINWEDYFMNIH 482
Query: 476 IPGV 479
IPG+
Sbjct: 483 IPGI 486
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 570 | ||||||
| TAIR|locus:2134278 | 493 | CER4 "ECERIFERUM 4" [Arabidops | 0.838 | 0.969 | 0.509 | 1.4e-133 | |
| TAIR|locus:2076028 | 493 | FAR4 "fatty acid reductase 4" | 0.842 | 0.973 | 0.481 | 3.9e-124 | |
| TAIR|locus:2171107 | 491 | FAR1 "fatty acid reductase 1" | 0.845 | 0.981 | 0.485 | 3.1e-122 | |
| TAIR|locus:2076023 | 496 | FAR5 "fatty acid reductase 5" | 0.849 | 0.975 | 0.474 | 6e-119 | |
| TAIR|locus:2076038 | 496 | FAR8 "fatty acid reductase 8" | 0.849 | 0.975 | 0.460 | 8.8e-118 | |
| TAIR|locus:2176407 | 409 | FAR7 "fatty acid reductase 7" | 0.624 | 0.870 | 0.4 | 2.1e-88 | |
| TAIR|locus:2088664 | 616 | MS2 "MALE STERILITY 2" [Arabid | 0.836 | 0.774 | 0.380 | 5.6e-84 | |
| DICTYBASE|DDB_G0289081 | 1279 | DDB_G0289081 "phospholipid/gly | 0.312 | 0.139 | 0.319 | 5.4e-39 | |
| UNIPROTKB|Q96K12 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.201 | 0.223 | 0.370 | 2.4e-34 | |
| UNIPROTKB|Q0P5J1 | 515 | FAR2 "Fatty acyl-CoA reductase | 0.429 | 0.475 | 0.265 | 8.4e-34 |
| TAIR|locus:2134278 CER4 "ECERIFERUM 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1309 (465.8 bits), Expect = 1.4e-133, P = 1.4e-133
Identities = 247/485 (50%), Positives = 341/485 (70%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
ME+ SV+++L+NK ILV G GF+A +F+EKILRV PNVKKLYLL+RA+ +SA RF +
Sbjct: 5 MEVVSVLKYLDNKSILVVGAAGFLANIFVEKILRVAPNVKKLYLLLRASKGKSATQRFND 64
Query: 61 EVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120
E+L KDLF VLKEK+G LN SEKIT V GDI EDLGL+D +L E+ +++D +VN
Sbjct: 65 EILKKDLFKVLKEKYGPNLNQLTSEKITIVDGDICLEDLGLQDFDLAHEMIHQVDAIVNL 124
Query: 121 AAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP--- 177
AA TKFDERYDVA GINTLGA++++NFAK+C K+K+ VHVSTAYV GE++GLI+E P
Sbjct: 125 AATTKFDERYDVALGINTLGALNVLNFAKRCAKVKILVHVSTAYVCGEKSGLIMETPYRM 184
Query: 178 ---LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234
L+G +GLD + E K++ +KL++L+ GA + IT MK+LG RAK++GWPNTYVFT
Sbjct: 185 GETLNGTTGLDINYEKKLVQEKLDQLRVIGAAPETITETMKDLGLRRAKMYGWPNTYVFT 244
Query: 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294
K MGEM++ +ENLSLV++RP+I++ T+KEPFPGW E ++TI++L V +G L C +
Sbjct: 245 KAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKGKLTCFLC 304
Query: 295 ETKTIMDVIPXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354
+ + DV+P A + + IYHVGSSLRNP+ + + YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 355 KPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRK 414
KPW NK+GK ++V I + SS+ SFH YM I YL+ LKGL+L N + F+ + K
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEKEFQYFNK 423
Query: 415 KVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNT 474
K+ F+ R+ ++Y+PY +F GIFDD+NTEKLR + E ++FYFDP ++W DYF+NT
Sbjct: 424 KINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDWDDYFLNT 483
Query: 475 HIPGV 479
H+ G+
Sbjct: 484 HVIGL 488
|
|
| TAIR|locus:2076028 FAR4 "fatty acid reductase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1220 (434.5 bits), Expect = 3.9e-124, P = 3.9e-124
Identities = 235/488 (48%), Positives = 329/488 (67%)
Query: 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKD 66
++FL +K ILV+GV GF+AKVF+EKILR+QP VKKL+LL+RAAD ESA RF +EVL KD
Sbjct: 6 IQFLHDKTILVTGVPGFLAKVFVEKILRIQPKVKKLFLLLRAADNESAMQRFHSEVLEKD 65
Query: 67 LFNVLKEKWGTR-LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK 125
LF VLK G L +FI+EK+ + GDIS ++LG+K S+L + +WNE+D++VN AA T
Sbjct: 66 LFRVLKNALGDENLKAFITEKVVPIPGDISVDNLGVKGSDLLQHMWNEIDIIVNVAATTN 125
Query: 126 FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP------LD 179
FDERYDV +NT G ++++NFAKKCVK ++ +HVSTAYV GE++GL+ E L+
Sbjct: 126 FDERYDVGLSVNTFGPLNVLNFAKKCVKGQLLLHVSTAYVRGEKSGLLHEKTFHMGETLN 185
Query: 180 GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239
G L + EM+++ QKL EL+ + ++EI+ MK+LG RAK+HGWPNTYVFTK+MGE
Sbjct: 186 GHRKLVIETEMELMKQKLKELQKQNCSEEEISQSMKDLGMSRAKLHGWPNTYVFTKSMGE 245
Query: 240 MIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI 299
M++ +ENL +VIIRPT+++ T+ EPFPGW+E L+TI+++ VA +G L C + + ++
Sbjct: 246 MLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKGRLKCFLADPNSV 305
Query: 300 MDVIPXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
+D+IP HA + +YHVGSS +NP+T I D YFTK P +
Sbjct: 306 LDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVR 365
Query: 360 KQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKKVKFV 419
+ G I VSK + S++A F YM + Y LPL+ L+L ++ + Y D+ +K+K
Sbjct: 366 RDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKLA 425
Query: 420 MRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTET-DLFYFDPDSIEWRDYFMNTHIPG 478
MR+ ++Y+PY F GIFDDTNTEKLR+ K E LF FDP SI+W DY HIPG
Sbjct: 426 MRLVDLYRPYVLFKGIFDDTNTEKLRLKRKEINKEMYGLFEFDPKSIDWEDYMTTIHIPG 485
Query: 479 VENILQQK 486
+ + +K
Sbjct: 486 LITYVLKK 493
|
|
| TAIR|locus:2171107 FAR1 "fatty acid reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 240/494 (48%), Positives = 332/494 (67%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
ME + V+FL NK IL++G GF+AKV +EKILR+QPNVKK+YLL+RA D +SA R ++
Sbjct: 1 ME-SNCVQFLGNKTILITGAPGFLAKVLVEKILRLQPNVKKIYLLLRAPDEKSAMQRLRS 59
Query: 61 EVLAKDLFNVLKEKWGT-RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVN 119
EV+ DLF VL+ G LN+ + EKI V GDIS ++LGLKD++L + +W+E+D+++N
Sbjct: 60 EVMEIDLFKVLRNNLGEDNLNALMREKIVPVPGDISIDNLGLKDTDLIQRMWSEIDIIIN 119
Query: 120 SAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYD+ GINT GA++++NFAKKCVK ++ +HVSTAY++GE+ GL+LE P
Sbjct: 120 IAATTNFDERYDIGLGINTFGALNVLNFAKKCVKGQLLLHVSTAYISGEQPGLLLEKPFK 179
Query: 178 ----LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233
L G LD + E ++ QKL EL+ +EI+ MK+ G RAK+HGWPNTYVF
Sbjct: 180 MGETLSGDRELDINIEHDLMKQKLKELQD--CSDEEISQTMKDFGMARAKLHGWPNTYVF 237
Query: 234 TKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLV 293
TK MGEM+M + +ENL LVIIRPT+++ T EPFPGW+E LKT++++ VA +G L C +
Sbjct: 238 TKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKGRLKCFL 297
Query: 294 GETKTIMDVIPXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353
++ ++ D+IP H+ IYHVGSS +NPVT + D+ YF
Sbjct: 298 ADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFA 357
Query: 354 KKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLR 413
K+P I + G PI V K + S++A F YM + Y LPL+ L+L N V+ Y+DL
Sbjct: 358 KRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHGDNYSDLS 417
Query: 414 KKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETD-LFYFDPDSIEWRDYFM 472
+K+K MR+ E+Y+PY F GIFDD NTE+LRM K + E D F FDP SI+W +Y
Sbjct: 418 RKIKLAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELDGSFEFDPKSIDWDNYIT 477
Query: 473 NTHIPG-VENILQQ 485
NTHIPG + ++L+Q
Sbjct: 478 NTHIPGLITHVLKQ 491
|
|
| TAIR|locus:2076023 FAR5 "fatty acid reductase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 236/497 (47%), Positives = 329/497 (66%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
MEL + V+FL NK ILV+G TGF+AKVF+EKILRVQPNVKKLYLL+RA+D E+A R +
Sbjct: 1 MEL-NCVQFLRNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRT 59
Query: 61 EVLAKDLFNVLKEKWGT-RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVN 119
EV K+LF VL++ G +LN+ + EK+ V GDI+++ LG+ DS+L+E + E+D++VN
Sbjct: 60 EVFEKELFKVLRQNLGDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP-- 177
AA T FDERYDV GINT GA++++NFAKKCVK+++ +HVSTAYV GE+ GLI E P
Sbjct: 120 VAATTNFDERYDVGLGINTFGALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFI 179
Query: 178 ---LDGASGL--DFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232
+ +GL D + E +++ Q+L EL + +++ITL MK LG ERAK+HGWPNTYV
Sbjct: 180 MEEIRNENGLQLDINLERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292
FTK+MGEM++ + KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L C
Sbjct: 240 FTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKTIMDVIPXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + ++ D+IP HA +YHVGSS +NPVT I + YF
Sbjct: 300 LVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYF 359
Query: 353 TKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDL 412
TK P ++ G I VSK+ ++A F YM + Y LPL+ L+L + ++ Y D
Sbjct: 360 TKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDK 419
Query: 413 RKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSR---TETDLFYFDPDSIEWRD 469
+K++ VMR+ E+Y+PY F GIFDD NT+ L K TE +F FDP I W D
Sbjct: 420 NRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKEEEIKNTEKLMFDFDPKGINWGD 479
Query: 470 YFMNTHIPG-VENILQQ 485
Y N HI G V ++L++
Sbjct: 480 YLTNIHISGLVTHVLKK 496
|
|
| TAIR|locus:2076038 FAR8 "fatty acid reductase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 229/497 (46%), Positives = 329/497 (66%)
Query: 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQN 60
ME S V FL+NK ILV+G TGF+AKVF+EKILRVQPNV KLYL++RA+D E+A R +
Sbjct: 1 MEF-SCVHFLQNKTILVTGATGFLAKVFVEKILRVQPNVNKLYLVVRASDNEAATKRLRT 59
Query: 61 EVLAKDLFNVLKEKWGT-RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVN 119
E KDLF VL++ G +LN+ +SEK+ VAGDI+ + LG+KDSNL+E + E+D++VN
Sbjct: 60 EAFEKDLFKVLRDNLGDEKLNTLLSEKVVPVAGDIAMDHLGMKDSNLRERMQKEIDIVVN 119
Query: 120 SAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL- 178
AA T FDERYD+ GINT GA++++NFAKKCVK ++ +HVSTAYV GE+ GL+ E P
Sbjct: 120 VAATTNFDERYDIGLGINTFGALNVLNFAKKCVKAQLLLHVSTAYVCGEKPGLLPEKPFV 179
Query: 179 ------DGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232
+ LD + E +++ Q+L EL +G ++ T +MK LG ERAK+HGWPNTYV
Sbjct: 180 MEEICNENGLQLDINLERELMKQRLKELNEQGCSEEGTTFYMKELGMERAKLHGWPNTYV 239
Query: 233 FTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292
FTK+MGEM++ KENL LVIIRPT+++ T EPFPGW+E L+T++++ +A +G L C
Sbjct: 240 FTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVDSVIIAYGKGVLKCF 299
Query: 293 VGETKTIMDVIPXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352
+ + ++ D+IP HA +Y VGSS +NP+ I + F YF
Sbjct: 300 LVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYF 359
Query: 353 TKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDL 412
TK ++ G I VSK+ L ++A F YM I Y LP++ L+L + ++ + Y +
Sbjct: 360 TKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNK 419
Query: 413 RKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKL--RMTTKGSR-TETDLFYFDPDSIEWRD 469
+K+ VMR+ ++Y+PY F GIFDD NT+ L + + +R +E +F FDP I+W+D
Sbjct: 420 NRKIDMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKEEDNRNSENFMFDFDPKIIKWKD 479
Query: 470 YFMNTHIPG-VENILQQ 485
Y +N HIPG + ++L++
Sbjct: 480 YLINVHIPGLITHVLKK 496
|
|
| TAIR|locus:2176407 FAR7 "fatty acid reductase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 724 (259.9 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 146/365 (40%), Positives = 217/365 (59%)
Query: 114 LDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173
L ++V ++ ++RYDVA GINT GAI+++NFAKKCVK K+ +HVST YV GER G I
Sbjct: 41 LYLLVRASDKKSAEQRYDVALGINTFGAINVLNFAKKCVKPKLLLHVSTVYVCGERPGHI 100
Query: 174 LEN------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227
+E L+G + +D + E ++ DQK + K +G ++E MK+ G +RA+++GW
Sbjct: 101 VEKHFAMGESLNGKNKVDINTERRLADQKSKQFKEQGCSEEETEQAMKDFGLKRARLYGW 160
Query: 228 PNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG 287
PNTYVFTK MGEM++ +E + +VIIRPTI++ T+ +PFPGW+E LKT++++ + +G
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKG 220
Query: 288 NLPCLVGETKTIMDVIPXXXXXXXXXXXXXXHAKQPSDANIYHVGSSLRNPVTLVSILDY 347
L C + + KT+ D+IP H +YHVGSS +NPV I +
Sbjct: 221 ILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEM 280
Query: 348 GFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKG 407
YF K P + + G I V K+ S++A F Y + Y LP++ L L + + + +
Sbjct: 281 MSRYFMKSPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQ-RD 338
Query: 408 VYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEW 467
+ +K K MR+ ++YKPY F GIFDD N E LR+ + E LF +P I+W
Sbjct: 339 KFALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDMEK-LFGTNPKCIDW 397
Query: 468 RDYFM 472
DYFM
Sbjct: 398 EDYFM 402
|
|
| TAIR|locus:2088664 MS2 "MALE STERILITY 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 192/504 (38%), Positives = 289/504 (57%)
Query: 3 LGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEV 62
LG ++ FL+ K L++G TGF+AKV IEK+LR+ P+V K+YLLI+A E+A R +NEV
Sbjct: 122 LG-IISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEV 180
Query: 63 LAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122
L +LFN LKE G SF+ K+ V G+I ++GL+ ++ EE+ E+DV++NSAA
Sbjct: 181 LDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQ-ADSAEEIAKEVDVIINSAA 239
Query: 123 ITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP----- 177
T F+ERYDVA INT G +L+ FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 240 NTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGD 299
Query: 178 -------LDG-ASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229
L+G LD D EMK+ E KG ++ MK+LG ERA+ +GW +
Sbjct: 300 CIATENFLEGNRKALDVDREMKLA----LEAARKGTQNQDEAQKMKDLGLERARSYGWQD 355
Query: 230 TYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL 289
TYVFTK MGEM++ ++ ++ +VIIRP+++ TYK+PFPGW+E + ++ + + +G L
Sbjct: 356 TYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQL 415
Query: 290 PCLVGETKTIMDVIPXXXXXXXXXXXXXXHAKQPSDA----NIYHVGSSLRNPVTLVSIL 345
+ + K ++DV+P H SD N+Y + SS NP+ +
Sbjct: 416 TGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLA 475
Query: 346 DYGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLA-NTVFHNF 404
+ + ++ P ++ +G PI V + LF+S+ F ++ GL ++V
Sbjct: 476 ELLYNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLWRD-AQERSGLMSGMSSVDSKM 534
Query: 405 FKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDS 464
+ + +K V+ +A IY+PY ++ G FD++NT++L S E F FD S
Sbjct: 535 MQKLKFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQRLMENM--SEDEKREFGFDVGS 592
Query: 465 IEWRDYFMNTHIPGVENILQQKRA 488
I W DY N HIPG+ + + RA
Sbjct: 593 INWTDYITNVHIPGLRRHVLKGRA 616
|
|
| DICTYBASE|DDB_G0289081 DDB_G0289081 "phospholipid/glycerol acyltransferase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 269 (99.8 bits), Expect = 5.4e-39, Sum P(2) = 5.4e-39
Identities = 61/191 (31%), Positives = 111/191 (58%)
Query: 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAK 65
+ F K +L++G TGFV KV +EK++R P+++K+Y++IR +A RF+ ++L
Sbjct: 4 LANFYAGKTVLITGATGFVGKVLLEKMVRDLPDIEKIYIIIRG----NAKERFEEDILQS 59
Query: 66 DLFNVLKEKWG-TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124
+++ K K G N+ I K+ + GD+S E LGL + + + ++++V+++ AA
Sbjct: 60 RIWDTCKAKMGEAAFNAHIHNKVVAIGGDLSKEGLGLSSEDYQTVV-DQVNVIIHCAASI 118
Query: 125 KFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN-PLDGASG 183
F ER D A N ++++++ +K+ + +VH STAYV R G + E P+
Sbjct: 119 DFRERLDKAISSNLYASLNMLDLSKRLKNVVAYVHCSTAYVNSNREGWLDEELPV----- 173
Query: 184 LDFDAEMKVID 194
LDF+ E +++D
Sbjct: 174 LDFNPE-EMVD 183
|
|
| UNIPROTKB|Q96K12 FAR2 "Fatty acyl-CoA reductase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 43/116 (37%), Positives = 64/116 (55%)
Query: 224 IHGWPNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVA 283
I WPN Y +TK +GEM++QQ NL++ IIRP+IV T++EPFPGWV+++ N + +A
Sbjct: 197 IRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIA 256
Query: 284 SAQGNLPCLVGETKTIMDVIPXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNP 338
+ +G L + + DVIP A +P +YH+ S NP
Sbjct: 257 TGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNP 312
|
|
| UNIPROTKB|Q0P5J1 FAR2 "Fatty acyl-CoA reductase 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 231 (86.4 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 70/264 (26%), Positives = 121/264 (45%)
Query: 224 IHGWPNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVA 283
I WPNTY +TK +GE+++QQ NL++ IIRP+I+ T++EPFPGWV++L + L +A
Sbjct: 197 IGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLIIA 256
Query: 284 SAQGNLPCLVGETKTIMDVIPXXXXXXXXXXXXXXHA-KQPSDANIYHVGSSLRNPVTLV 342
+ +G L + + D+IP A +P +YH S NP
Sbjct: 257 AGKGFLRSIRATPMAVADLIPADTVVNLTLAVGWYTAVHRPKSTLVYHCTSGNLNPCNWG 316
Query: 343 SILDYGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFH 402
+ F K P+ +P + ++I + H + + + P + +
Sbjct: 317 KMGLQVLATFEKIPFERAFRRP---NADFTTNNITT-HYWNAVSHRAP--------AIIY 364
Query: 403 NFFKGVYNDLRKKVKFVMRVAEIYKPYFYF-NGIFD-DT-NTEKLRMTTKGSRTETDLFY 459
+F+ + + K + R+ YF N ++ T NTE L ++ S + +F
Sbjct: 365 DFYLRLTGRKPRMTKLMNRLLRTLSMLEYFVNRSWEWSTYNTEMLM--SELSPEDQRVFN 422
Query: 460 FDPDSIEWRDYFMNTHIPGVENIL 483
FD + W +Y N ++ GV+ L
Sbjct: 423 FDVRQLNWLEYIEN-YVLGVKKYL 445
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93ZB9 | FACR3_ARATH | 1, ., 2, ., 1, ., n, 2 | 0.5257 | 0.8385 | 0.9695 | yes | no |
| Q9XGY7 | FAR_SIMCH | 1, ., 2, ., 1, ., 8, 4 | 0.5580 | 0.8473 | 0.9797 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 570 | |||
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 0.0 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 1e-141 | |
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 1e-105 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 5e-81 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 5e-25 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 2e-18 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 2e-16 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 9e-14 | |
| cd09071 | 92 | cd09071, FAR_C, C-terminal domain of fatty acyl Co | 2e-13 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 5e-09 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 7e-09 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 2e-08 | |
| pfam03015 | 94 | pfam03015, Sterile, Male sterility protein | 2e-07 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 2e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-05 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 3e-04 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 4e-04 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 4e-04 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 9e-04 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 0.003 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 0.003 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 0.003 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 738 bits (1908), Expect = 0.0
Identities = 288/485 (59%), Positives = 367/485 (75%), Gaps = 7/485 (1%)
Query: 2 ELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNE 61
E GS V+FLENK ILV+G TGF+AK+F+EKILRVQPNVKKLYLL+RA+D +SA R +E
Sbjct: 1 EEGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDE 60
Query: 62 VLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSA 121
V+ KDLF VL+EK G LNS ISEK+T V GDIS +DLG+KDSNL+EE+W E+D++VN A
Sbjct: 61 VIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLA 120
Query: 122 AITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENP---- 177
A T FDERYDVA GINTLGA++++NFAKKCVK+K+ +HVSTAYV GE++GLILE P
Sbjct: 121 ATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMG 180
Query: 178 --LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235
L+G LD + E K++ +KL EL + A ++EIT MK+LG ERAK+HGWPNTYVFTK
Sbjct: 181 ETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK 240
Query: 236 TMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295
MGEM++ KENL LVIIRPT+++ TYKEPFPGW+E L+TI+++ V +G L C + +
Sbjct: 241 AMGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLAD 300
Query: 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355
+++DVIP DMVVNAMIVAM AHA IYHVGSSL+NPV ++ D+ + YF+K
Sbjct: 301 PNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN 360
Query: 356 PWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLRKK 415
PWINK+G P++V K + S++ASF YM I YLLPLK LQL N + + Y DL +K
Sbjct: 361 PWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIILPKRYGDKYTDLNRK 420
Query: 416 VKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKG-SRTETDLFYFDPDSIEWRDYFMNT 474
+K VMR+ ++YKPY +F GIFDDTNTEKLR+ K + E D+F FDP SI+W DY N
Sbjct: 421 IKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNV 480
Query: 475 HIPGV 479
HIPG+
Sbjct: 481 HIPGL 485
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 420 bits (1082), Expect = e-141
Identities = 199/504 (39%), Positives = 299/504 (59%), Gaps = 32/504 (6%)
Query: 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAK 65
+ EFL K L++G TGF+AKV IEKILR P+V K+YLLI+A D E+A R +NEV+
Sbjct: 113 IAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDA 172
Query: 66 DLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK 125
+LF L+E G SF+ K+ V G++ +LGL + +L +E+ E+DV++NSAA T
Sbjct: 173 ELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGL-EPDLADEIAKEVDVIINSAANTT 231
Query: 126 FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPL------- 178
FDERYDVA INT G HL++FAKKC KLK+F+ VSTAYV G+R G I+E P
Sbjct: 232 FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIA 291
Query: 179 ----------DGASGLDFDAEMKV-IDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227
LD +AE+K+ +D K + ++ QK MK+LG ERAK++GW
Sbjct: 292 RELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQK-----MKDLGLERAKLYGW 346
Query: 228 PNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG 287
+TYVFTK MGEM++ + ++ +VIIRP+++ T+K+PFPGW+E + ++ + + +G
Sbjct: 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKG 406
Query: 288 NLPCLVGETKTIMDVIPVDMVVNAMIVAMVAH-AKQPSDANIYHVGSSLRNPVTLVSILD 346
L + + ++DV+P DMVVNA + AM H + N+Y + SS+ NP+ +
Sbjct: 407 QLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLAR 466
Query: 347 YGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFK 406
+ ++ P+++ +G+PI V + LFSS+ F ++ L GL ++ +
Sbjct: 467 LLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDFSSHLWR-DALLRSGLAGMSSSDRKLSQ 525
Query: 407 GVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKL--RMTTKGSRTETDLFYFDPDS 464
+ N K V+ +A IY+PY ++ G FD++NT++L RM S E F FD S
Sbjct: 526 KLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERM----SEEEKAEFGFDVGS 581
Query: 465 IEWRDYFMNTHIPGVENILQQKRA 488
I+WRDY N HIPG+ + + R
Sbjct: 582 IDWRDYITNVHIPGLRRHVMKGRG 605
|
Length = 605 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-105
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 26/345 (7%)
Query: 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLK 72
K +L++G TGF+ KV +EK+LR P++ K+YLLIR +SA R + + K
Sbjct: 1 KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLF----- 55
Query: 73 EKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDV 132
G LN KI + GD+S +LGL D +L + L E++++++ AA FDER D
Sbjct: 56 -DRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDL-QTLIEEVNIIIHCAATVTFDERLDE 113
Query: 133 AFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKV 192
A IN LG + L+ AK+C KLK FVHVSTAYV G+R LI E D ++
Sbjct: 114 ALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQ-LIEEKVY--PPPAD-PEKLID 169
Query: 193 IDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252
I + +++L+ + A K + G PNTY FTK + E ++ + + NL LV
Sbjct: 170 ILELMDDLELERATPK--------------LLGGHPNTYTFTKALAERLVLKERGNLPLV 215
Query: 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312
I+RP+IV T KEPFPGW+++ + LF+A +G L + + + D+IPVD+V NA+
Sbjct: 216 IVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANAL 275
Query: 313 IVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356
+ A ++P + +YH GSS NP T + Y K P
Sbjct: 276 LAAAAYSGVRKPRELEVYHCGSSDVNPFTWGEAEELINQYLKKNP 320
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 253 bits (649), Expect = 5e-81
Identities = 101/297 (34%), Positives = 146/297 (49%), Gaps = 53/297 (17%)
Query: 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWG 76
++G TGF+ KV +EK+LR P VK +Y L+RA D ESA R + E+L LF+ LK
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVK-IYCLVRAKDGESALERLRQELLKYGLFDRLK---- 55
Query: 77 TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGI 136
E+I VAGD+S +LGL D + +EL E+DV++++AA F E Y
Sbjct: 56 ------ALERIIPVAGDLSEPNLGLSDEDF-QELAEEVDVIIHNAATVNFVEPYSDLRAT 108
Query: 137 NTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQK 196
N LG ++ AK+ K F HVSTAYV GER GL+ E P
Sbjct: 109 NVLGTREVLRLAKQM-KKLPFHHVSTAYVNGERGGLLEEKP------------------- 148
Query: 197 LNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLVIIRP 256
K E A + G PN Y +K + E +++++ L +VI RP
Sbjct: 149 -----------------YKLDEDEPALLGGLPNGYTQSKWLAEQLVREAAGGLPVVIYRP 191
Query: 257 TIVSGTYKEPFPGWVEDLKTINALFVASAQ-GNLPCLVGETKTIMDVIPVDMVVNAM 312
+I++G E GW+ + A G LP ++G+ +D++PVD V NA+
Sbjct: 192 SIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 5e-25
Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 76/333 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
+ V+G TGF+ + ++++L N K+ +L+R + E
Sbjct: 1 VFVTGGTGFLGRHLVKRLL---ENGFKVLVLVR--SESLGEAHERIEEA----------- 44
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAF 134
++++ + GD++ +LGL + +E ++D +++ AA F + A+
Sbjct: 45 ------GLEADRVRVLEGDLTQPNLGLSAAASRELA-GKVDHVIHCAASYDFQAPNEDAW 97
Query: 135 GINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G H++ A + ++ F +VSTAYVAG R G I E L+
Sbjct: 98 RTNIDGTEHVLELAARL-DIQRFHYVSTAYVAGNREGNIRETELNPGQNF---------- 146
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLVII 254
N Y +K E +++ + + L +
Sbjct: 147 ---------------------------------KNPYEQSKAEAEQLVRAAATQIPLTVY 173
Query: 255 RPTIVSGTYKEPFPGWVEDLKTINALFVASA-QGNLPCLVGETKTIMDVIPVDMVVNAMI 313
RP+IV G K G +E + + L A G + G ++++PVD V +A I
Sbjct: 174 RPSIVVGDSKT---GRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADA-I 229
Query: 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
V + + I+H+ P TL I D
Sbjct: 230 VYLSKKPEANGQ--IFHLTD--PTPQTLREIAD 258
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 51/251 (20%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
+L++G TGF+ + ++L+ + NV K+Y L+RA D E+A R + LKE
Sbjct: 2 VLLTGATGFLGAYLLRELLK-RKNVSKIYCLVRAKDEEAALERLID---------NLKEY 51
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAF 134
+ +I V GD+S +LGL D + +EL E+DV++++ A + Y+
Sbjct: 52 GLNLWDELELSRIKVVVGDLSKPNLGLSDDD-YQELAEEVDVIIHNGANVNWVYPYEELK 110
Query: 135 GINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N LG L+ A KLK VST V + + LD + +++
Sbjct: 111 PANVLGTKELLKLAAT-GKLKPLHFVSTLSVFSA----------EEYNALDDEESDDMLE 159
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ-SKENLSLVI 253
+ G PN Y+ +K + E ++++ + L + I
Sbjct: 160 SQN----------------------------GLPNGYIQSKWVAEKLLREAANRGLPVAI 191
Query: 254 IRPTIVSGTYK 264
IRP + G +
Sbjct: 192 IRPGNIFGDSE 202
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 2e-16
Identities = 78/360 (21%), Positives = 135/360 (37%), Gaps = 80/360 (22%)
Query: 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKE 73
+L++G TGF+ +E++LR K + L+RAA E A R + + + L
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAK-VICLVRAASEEHAMERLREALRSYRL------ 53
Query: 74 KWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVA 133
W E+I VAGD+S LGL D+ E L +D +V++ A+ + Y
Sbjct: 54 -WHE---DLARERIEVVAGDLSEPRLGLSDAEW-ERLAENVDTIVHNGALVNWVYPYSEL 108
Query: 134 FGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV--AGERTGLILENPLDGASGLDFDAEMK 191
G N LG ++ A + K +VST V A + + + ++
Sbjct: 109 RGANVLGTREVLRLAAS-GRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPP-------- 159
Query: 192 VIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKEN-LS 250
G Y +K + E++++++ + L
Sbjct: 160 ----------------------------------GLAGGYAQSKWVAELLVREASDRGLP 185
Query: 251 LVIIRPTIVSGTYKEPFPG-W-VEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308
+ I+RP + G + G D+ + A G P T D+ PVD V
Sbjct: 186 VTIVRPGRILG---NSYTGAINSSDILW-RMVKGCLALGAYPQSPELT---EDLTPVDFV 238
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPIEVS 368
A IV + + + ++HV + PV+L LD W+ + G + +
Sbjct: 239 ARA-IVVLSSRPAASAGGPVFHVVN--PEPVSLDEFLD----------WLERAGYNLRLV 285
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 9e-14
Identities = 68/338 (20%), Positives = 131/338 (38%), Gaps = 67/338 (19%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
+L++G TGF+ + ++L K+ L+RA E+A R + DL+ E
Sbjct: 3 VLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEK---TFDLYRHWDEL 57
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAF 134
++++ VAGD++ DLGL + +EL +D+++++AA+ Y
Sbjct: 58 S--------ADRVEVVAGDLAEPDLGLSERTW-QELAENVDLIIHNAALVNHVFPYSELR 108
Query: 135 GINTLGAIHLVNFAKKCV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVI 193
G N LG ++ A K K +VS+ V + +F + I
Sbjct: 109 GANVLGTAEVLRLA--ATGKPKPLHYVSSISV------------GETEYYSNFTVDFDEI 154
Query: 194 DQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKEN-LSLV 252
N G Y +K + E +++++ + L +
Sbjct: 155 SPTRN------------------------VGQGLAGGYGRSKWVAEKLVREAGDRGLPVT 190
Query: 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ-GNLPCLVGETKTIMDVIPVDMVVNA 311
I RP ++G + G + + L + Q G P + +D++PVD V A
Sbjct: 191 IFRPGYITGDSRT---GALNTRDFLTRLVLGLLQLGIAPD-SEYS---LDMLPVDHVARA 243
Query: 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349
++ + Q ++A I +G+ + +L +
Sbjct: 244 VVAP----SVQVAEA-IAALGAHSDIRFNQLHMLTHPD 276
|
Length = 382 |
| >gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 2e-13
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 385 ICYLLPLKGLQLANTVFHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKL 444
+LLP L L + G L K + + ++ ++ + + FD+ NT L
Sbjct: 1 FLHLLPAYLLDLLLRLL-----GRKPRLLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRAL 55
Query: 445 RMTTKGSRTETDLFYFDPDSIEWRDYFMNTHIPGV 479
S + +LF FD SI+W DYF N +IPG+
Sbjct: 56 WERL--SEEDRELFNFDIRSIDWDDYFEN-YIPGL 87
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 5e-09
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 44/190 (23%)
Query: 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKW 75
V+G TGF+ + + ++L + +++L+R +S + R + L W
Sbjct: 4 FVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRR---QSLS-RLEA----------LAAYW 48
Query: 76 GTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFG 135
G +++ + GD++ LGL ++++ E ++D +V+ AAI YD+
Sbjct: 49 GA-------DRVVPLVGDLTEPGLGLSEADIAE--LGDIDHVVHLAAI------YDLTAD 93
Query: 136 ------INTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLD---- 185
N G ++V A++ ++ F HVS+ VAG+ G+ E+ D GL
Sbjct: 94 EEAQRAANVDGTRNVVELAER-LQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYH 152
Query: 186 ---FDAEMKV 192
F+AE V
Sbjct: 153 RTKFEAEKLV 162
|
Length = 657 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 7e-09
Identities = 50/225 (22%), Positives = 81/225 (36%), Gaps = 61/225 (27%)
Query: 114 LDVMVNSAAITKFDERYD---VAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170
LDV+V+ AA+ +D F N +G ++L+ A+K +K FV+ S+A V G
Sbjct: 31 LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKA-GVKRFVYASSASVYGSPE 89
Query: 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230
GL P++E T P +
Sbjct: 90 GL---------------------------------PEEEETPPR-------------PLS 103
Query: 231 -YVFTKTMGEMIMQ--QSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG 287
Y +K E +++ L +VI+R V G P D +N + +G
Sbjct: 104 PYGVSKLAAEHLLRSYGESYGLPVVILRLANVYG----PGQRPRLDGV-VNDFIRRALEG 158
Query: 288 NLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332
+ G D I VD VV A++ A+ +Y++G
Sbjct: 159 KPLTVFGGGNQTRDFIHVDDVVRAILHAL---ENPLEGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 76/352 (21%), Positives = 137/352 (38%), Gaps = 70/352 (19%)
Query: 11 ENKIILVSGVTGFVAKVFIEKIL--RVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLF 68
+ ++G TGF+ + +L R N K ++ +RA E+ R + +
Sbjct: 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFK-VFAHVRAKSEEAGLERLRKTGTT---Y 1025
Query: 69 NVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDE 128
+ E+W + +I V GD+S E GL D +L NE+DV++++ A+ +
Sbjct: 1026 GIWDEEW--------ASRIEVVLGDLSKEKFGLSDEKWS-DLTNEVDVIIHNGALVHWVY 1076
Query: 129 RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
Y N +G I+++N + K K F VS+ S LD +
Sbjct: 1077 PYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSS------------------TSALDTEY 1117
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE-MIMQQSKE 247
+ + D+ + G P+ + +L + Y +K + E +I + K
Sbjct: 1118 YVNLSDELVQAGG-AGIPESD------DLMGSSKGLG---TGYGQSKWVAEYIIREAGKR 1167
Query: 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINA------LFVASAQ-GNLPCLVGETKTIM 300
L I+RP V+G K N + Q G +P +
Sbjct: 1168 GLRGCIVRPGYVTGDSKT---------GATNTDDFLLRMLKGCIQLGLIP----NINNTV 1214
Query: 301 DVIPVDMVVNAMIVAMVA-HAKQPSDANIYHVGS--SLRNPVTLVSILDYGF 349
+++PVD V A +V A + + S+ + HV +R L ++ YG+
Sbjct: 1215 NMVPVDHV--ARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTYGY 1264
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
| >gnl|CDD|111859 pfam03015, Sterile, Male sterility protein | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 2e-07
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 387 YLLPLKGLQLANTVFHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRM 446
+ LP L L ++ K L +K+ + E+ +P+ IFD+ NT +LR
Sbjct: 3 HTLPAYFLDLLLRLYGQ--KPRLVKLYRKIH---KGLEVLQPFSLNEWIFDNKNTRELRE 57
Query: 447 TTKGSRTETDLFYFDPDSIEWRDYFMNTHIPGV 479
K S + LF FD +S++W +YF N I G+
Sbjct: 58 --KMSEEDKKLFNFDMESLDWDEYFRN-AIRGI 87
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 94 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 2e-06
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 76 GTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNEL--DVMVNSAAITKFD---ERY 130
GT L + + +A D + D+ + E + E DV++N+AA T D
Sbjct: 13 GTELRRALPGEFEVIATDRAELDI-TDPDAVLE-VIRETRPDVVINAAAYTAVDKAESEP 70
Query: 131 DVAFGINTLGAIHLVNFAKKC-VKLKVFVHVSTAYV-AGERTGLILE----NPLD--GAS 182
++AF +N GA +L A + +L VH+ST YV GE+ G E NPL+ G S
Sbjct: 71 ELAFAVNATGAENLARAAAEVGARL---VHISTDYVFDGEKGGPYKETDTPNPLNVYGRS 127
|
Length = 281 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 4e-05
Identities = 58/342 (16%), Positives = 107/342 (31%), Gaps = 100/342 (29%)
Query: 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLK 72
ILV+G GF+ +E++L +V L R D L
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDGLDPLL---------------- 41
Query: 73 EKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF----DE 128
+ FV D++ DL + E D +++ AA +
Sbjct: 42 ------------SGVEFVVLDLTDRDL------VDELAKGVPDAVIHLAAQSSVPDSNAS 83
Query: 129 RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188
+N G ++L+ A+ +K FV S+ V
Sbjct: 84 DPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDP------------------ 124
Query: 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ--SK 246
E N Y +K E +++
Sbjct: 125 -------------------------PPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL 159
Query: 247 ENLSLVIIRPTIVSGTYKEP-FPGWVEDLKTINALFVASAQG-NLPCLVGETKTIMDVIP 304
L +VI+RP V G +P V ++A +G + + G+ D +
Sbjct: 160 YGLPVVILRPFNVYGPGDKPDLSSGV-----VSAFIRQLLKGEPIIVIGGDGSQTRDFVY 214
Query: 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILD 346
VD V +A+++A+ + D ++++GS +T+ + +
Sbjct: 215 VDDVADALLLAL-----ENPDGGVFNIGSG-TAEITVRELAE 250
|
Length = 314 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 44/175 (25%)
Query: 10 LENKIILVSGVTG----FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAK 65
L K+ LV+G + +A+ + RV V A R E A+
Sbjct: 3 LSGKVALVTGASSGIGRAIARALAREGARV---V--------------VAARRSEEEAAE 45
Query: 66 DLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNE---LDVMVNSAA 122
L +KE G + VA D+S ++ ++ L E +D++VN+A
Sbjct: 46 ALAAAIKEAGG--------GRAAAVAADVSDDEESVEA--LVAAAEEEFGRIDILVNNAG 95
Query: 123 ITKF--------DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169
I +E +D +N LGA L A +K + V++S+ VAG
Sbjct: 96 IAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISS--VAGLG 148
|
Length = 251 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 4e-04
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 115 DVMVNSAAITKFD--ERY-DVAFGINTLGAIHLVNFAKKCVKLKV-FVHVSTAYV-AGER 169
DV+VN+AA T D E ++A+ +N LG +L A+ C +H+ST YV G +
Sbjct: 51 DVVVNAAAYTAVDKAESEPELAYAVNALGPGNL---AEACAARGAPLIHISTDYVFDGAK 107
Query: 170 TGLILE----NPL 178
G E PL
Sbjct: 108 GGPYREDDPTGPL 120
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 115 DVMVNSAAITKFD--ERY-DVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV-AGERT 170
D +VN+AA T D E + AF +N L +L A + VH+ST YV GE
Sbjct: 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG--ARLVHISTDYVFDGEGK 109
Query: 171 GLILE----NPL 178
E NPL
Sbjct: 110 RPYREDDATNPL 121
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 9e-04
Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 34/158 (21%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYL--LIRAADTESAALRFQNEVLAKDLFNVLK 72
ILV+G GF+ F+ IL P+ + + L L A + E+ L
Sbjct: 2 ILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLEN-----------------LA 44
Query: 73 EKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYD- 131
+ + + FV GDI D L E ++ D +V+ AA + D
Sbjct: 45 DLED-------NPRYRFVKGDIG--DRELVSRLFTE---HQPDAVVHFAAESHVDRSISG 92
Query: 132 -VAF-GINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167
AF N +G L+ +K F H+ST V G
Sbjct: 93 PAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.003
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 115 DVMVNSAAITKFDER---YDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165
DV++N AA T+ D+ ++A+ +N L +L AK+ +H+ST YV
Sbjct: 57 DVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGAR--LIHISTDYV 108
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 54/180 (30%)
Query: 13 KIILVSGVTG----FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLF 68
+L++G TG +A+ + + L L+ R AA E++A+
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEG------ARHLVLVSRRGPAPGAA-----ELVAE--- 46
Query: 69 NVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITK 125
L+ +T A D++ D L L L LD +V++A +
Sbjct: 47 --LEALGAE---------VTVAACDVADRD-ALA--ALLAALPAALGPLDGVVHNAGVLD 92
Query: 126 -------FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS-----------TAYVAG 167
ER++ GA +L + L FV S Y A
Sbjct: 93 DGPLEELTPERFERVLAPKVTGAWNLHELTRDL-DLGAFVLFSSVAGVLGSPGQANYAAA 151
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.003
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 31/157 (19%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
ILV+G GF+ F+ +L P+ K + L D + A +N L++
Sbjct: 3 ILVTGGAGFIGSNFVRYLLNKYPDYKIINL-----DKLTYAGNLEN----------LEDV 47
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAF 134
S + FV GDI +L + L EE ++D +++ AA + D
Sbjct: 48 SS-------SPRYRFVKGDICDAELVDR---LFEE--EKIDAVIHFAAESHVDRSISDPE 95
Query: 135 G---INTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
N LG L+ A+K +K FVH+ST V G+
Sbjct: 96 PFIRTNVLGTYTLLEAARKY-GVKRFVHISTDEVYGD 131
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.98 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.98 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.97 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.97 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.96 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.95 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.95 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.95 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.94 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.94 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.94 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.94 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.94 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.94 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.93 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.93 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.93 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.93 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.93 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.92 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.92 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.92 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.91 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.9 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.9 | |
| PF03015 | 94 | Sterile: Male sterility protein; InterPro: IPR0042 | 99.89 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.87 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.85 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.84 | |
| cd09071 | 92 | FAR_C C-terminal domain of fatty acyl CoA reductas | 99.83 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.81 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.81 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.8 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.8 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.79 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.78 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.76 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.74 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.74 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.73 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.73 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.72 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.71 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.7 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.7 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.69 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.68 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.68 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.68 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.68 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.67 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.66 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.66 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.66 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.66 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.65 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.65 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.63 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.63 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.63 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.61 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.61 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.6 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.59 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.58 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.58 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.58 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.58 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.58 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.57 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.57 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.57 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.57 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.57 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.56 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.56 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.55 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.55 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.55 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.54 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.53 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.53 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.52 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.52 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.52 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.52 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.51 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.51 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.51 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.51 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.5 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.49 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.49 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.49 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.48 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.48 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.48 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.48 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.48 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.47 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.46 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.46 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.46 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.46 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.46 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.43 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.42 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.42 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.42 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.42 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.41 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.41 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.4 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.4 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.39 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.39 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.39 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.38 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.38 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.37 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.37 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.36 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.36 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.36 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.35 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.35 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.33 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.32 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.32 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.31 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.31 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.3 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.28 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.28 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.27 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.26 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.24 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.24 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.23 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.23 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.22 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.22 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.22 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.21 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.21 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.2 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.18 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.18 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.17 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.16 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.13 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.1 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.07 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.03 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.03 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.01 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.98 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.92 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.9 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.89 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.8 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.75 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.74 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.72 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.71 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.71 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.68 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.66 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.66 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.61 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.57 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.57 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.54 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.53 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.49 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.22 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.18 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.14 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.11 | |
| PLN00106 | 323 | malate dehydrogenase | 98.09 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.03 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.02 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.75 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.72 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.59 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.57 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 97.56 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 97.46 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.31 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.23 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.2 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.19 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.13 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.12 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.99 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.92 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.84 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.82 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 96.71 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.59 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.57 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.47 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.41 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 96.35 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.33 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.22 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.2 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.11 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.09 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.96 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.74 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.65 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.65 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.63 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 95.58 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.48 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 95.47 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.39 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.37 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.28 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.24 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.21 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.17 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.03 | |
| PTZ00374 | 1108 | dihydroxyacetone phosphate acyltransferase; Provis | 94.98 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 94.97 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.97 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 94.89 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 94.88 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 94.79 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 94.78 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 94.75 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 94.64 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 94.59 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 94.47 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 94.46 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 94.4 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.38 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 94.27 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 94.24 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 94.03 | |
| PRK07411 | 390 | hypothetical protein; Validated | 93.94 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 93.92 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 93.84 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 93.72 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 93.64 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 93.62 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 93.57 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 93.34 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 93.32 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.3 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 93.22 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 93.19 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 93.19 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 93.14 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 92.87 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 92.85 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 92.73 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 92.64 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 92.54 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 92.46 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 92.41 | |
| PLN02602 | 350 | lactate dehydrogenase | 92.36 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 92.22 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 92.14 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 91.86 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 91.69 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 91.58 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 91.57 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 91.34 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 91.24 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 91.0 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 90.84 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 90.75 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 90.73 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 90.62 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 90.21 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 89.99 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 89.86 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 89.76 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 89.65 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 89.2 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 89.06 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 88.97 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 88.91 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 88.85 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 88.62 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 88.46 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 88.27 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 88.11 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 88.08 | |
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 87.69 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 87.62 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 87.57 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 87.38 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 87.08 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 87.01 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 87.0 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 86.66 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 86.65 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 86.34 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 86.13 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 85.96 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 85.89 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 85.82 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 85.53 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 85.18 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 85.15 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 85.15 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 85.11 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 85.09 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 85.02 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 85.01 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 84.52 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 84.22 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 84.12 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 84.11 | |
| KOG1496 | 332 | consensus Malate dehydrogenase [Energy production | 83.95 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 83.84 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 83.65 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 83.42 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 83.39 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 83.1 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 82.95 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 82.95 | |
| KOG1178 | 1032 | consensus Non-ribosomal peptide synthetase/alpha-a | 82.33 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 82.05 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 82.04 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 81.82 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 81.5 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 81.1 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 80.84 | |
| KOG2018 | 430 | consensus Predicted dinucleotide-utilizing enzyme | 80.4 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 80.38 | |
| PF12683 | 275 | DUF3798: Protein of unknown function (DUF3798); In | 80.21 |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-97 Score=774.10 Aligned_cols=463 Identities=39% Similarity=0.630 Sum_probs=428.2
Q ss_pred CCccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
|+.++|++||+||+|||||||||+||+|+|+||+++|+|++||+|+|+|+++++.+|+++ ..++++|+.+++.+|.
T Consensus 1 ~~~~~i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~-~~~~~lF~~l~~~~p~--- 76 (467)
T KOG1221|consen 1 MEISDIVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRT-ELKDPLFEVLKEKKPE--- 76 (467)
T ss_pred CCcccHHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHH-HHhhhHHHHHHhhCcc---
Confidence 566779999999999999999999999999999999999999999999999999999994 5555999999999986
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
..+|+.+|.||+++|+||+|+.|.. .+.++||+|||+||+++|+++++.++.+|+.||++++++|++|++++.||||
T Consensus 77 --~l~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhV 153 (467)
T KOG1221|consen 77 --ALEKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHV 153 (467)
T ss_pred --ceecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEe
Confidence 3589999999999999999999975 8999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||||+++.. +.++|++|++....+++..+++.+ +++++.++. ++++++++|||||++||++||+
T Consensus 154 STAy~n~~~-~~i~E~~y~~~~~~~~~~~i~~~~---------~~~~~~ld~------~~~~l~~~~PNTYtfTKal~E~ 217 (467)
T KOG1221|consen 154 STAYSNCNV-GHIEEKPYPMPETCNPEKILKLDE---------NLSDELLDQ------KAPKLLGGWPNTYTFTKALAEM 217 (467)
T ss_pred ehhheeccc-ccccccccCccccCCHHHHHhhhc---------cchHHHHHH------hhHHhcCCCCCceeehHhhHHH
Confidence 999999665 589999999877778887765554 667777766 5677788999999999999999
Q ss_pred HHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 241 IMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 241 ~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
++.++..++|++|+|||+|.+++.||+|||++|.+|+++++.++++|.++.+.+|++...|+||||+|||++++++|...
T Consensus 218 ~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~ 297 (467)
T KOG1221|consen 218 VIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHA 297 (467)
T ss_pred HHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCC--CCceEEeccCCCCcccHHhHHHHHhhhcccCCCCCCCCCeEEecceeeeccHHHHHHHHHHHHHhhHHHHHHHH
Q 008315 321 KQPS--DANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQLAN 398 (570)
Q Consensus 321 ~~~~--~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~~~~g~~i~~p~~~~~~~~~~~~~~~~~~~~lPa~~ld~~~ 398 (570)
.... +..|||++++..||++|+++.+...+++.+.|+. +.+|+|...++++.+.|.++.+++|.+||+++|+++
T Consensus 298 ~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~----~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~ 373 (467)
T KOG1221|consen 298 GNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLE----KMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLL 373 (467)
T ss_pred ccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcc----cceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHH
Confidence 4432 3789999999999999999999999999999998 789999999999999999999999999999999999
Q ss_pred HhhcccccchhHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHhhccCCCCCccccccCCCCCCHHHHHhhcchhh
Q 008315 399 TVFHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWRDYFMNTHIPG 478 (570)
Q Consensus 399 ~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~F~~~~w~Fd~~n~~~L~~~ls~~Dr~~~~F~fD~~~idW~~Y~~~~~i~G 478 (570)
++.|+ +|++.++++++ ++..++++||++++|.||++|+.+|+..|+++|++ +|+||++++||++|+.+ |++|
T Consensus 374 ~i~g~--k~~~~k~~~ki---~~~~~~l~~f~~~~w~Fd~~n~~~L~~~~~~~d~~--~f~fd~~~ldW~ey~~~-~i~G 445 (467)
T KOG1221|consen 374 RLLGK--KPRLVKLYRKI---HKLVKLLEPFSLFKWIFDNKNTEKLREKMSEEDKR--LFNFDMKQLDWEEYFNR-HLLG 445 (467)
T ss_pred HHhCC--ChhhhHHHHHH---HHHHHhhhhheeceEEecCccHHHHHHhCCHHHHh--hcCCCcccCCHHHHHHH-HHHH
Confidence 99876 48888887665 67788999999999999999999999999999987 99999999999999999 7999
Q ss_pred HHHHhhcCCCCChhHHhhhc
Q 008315 479 VENILQQKRAFPITKVFRSG 498 (570)
Q Consensus 479 irkyllke~~~~~~~~~~~~ 498 (570)
+|+|++||+++++.+..++.
T Consensus 446 ~r~~llKe~~e~l~~~r~~~ 465 (467)
T KOG1221|consen 446 LRKYLLKESPESLPQARKRL 465 (467)
T ss_pred HHHHHhcCChhhhHHHHHhh
Confidence 99999999999888744443
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-86 Score=720.28 Aligned_cols=483 Identities=59% Similarity=1.019 Sum_probs=442.3
Q ss_pred ccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 3 LGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 3 ~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
.++|.+||+||+|||||||||||++|+++||+++++|++||+|+|++++.++.+|+..++.+.++|+++++..|..+..+
T Consensus 2 ~~~i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~ 81 (491)
T PLN02996 2 EGSCVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSL 81 (491)
T ss_pred cccHHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhh
Confidence 46799999999999999999999999999999999999999999999999999999888999999999999988766555
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
..++++++.||+++|+|||++.+..+.+++++|+|||+||.++++++++.++++|+.||.+++++|++++++++|||+||
T Consensus 82 ~~~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST 161 (491)
T PLN02996 82 ISEKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST 161 (491)
T ss_pred hhcCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence 56899999999999999999888666788899999999999999999999999999999999999999878999999999
Q ss_pred ccccCCCCCeeccccCCCCC------CCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 163 AYVAGERTGLILENPLDGAS------GLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~e~~------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
++|||...+.++|++|++.. +.|++++...+.+.+.++..+.++++.++..++++|++++...+|||+|++||+
T Consensus 162 ~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~ 241 (491)
T PLN02996 162 AYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKA 241 (491)
T ss_pred eEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHH
Confidence 99999887789999987433 347888887777667777777789999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHH
Q 008315 237 MGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 237 ~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
+||+++.++..++|++|+||++|+|+.++|+|||+++++++.+++.++++|.++.++|+++..+|+|||||||+++++++
T Consensus 242 ~aE~lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 242 MGEMLLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 99999998878999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCCCCCCCCCeEEecceeeeccHHHHHHHHHHHHHhhHHHHHH
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQICYLLPLKGLQL 396 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~~~~g~~i~~p~~~~~~~~~~~~~~~~~~~~lPa~~ld~ 396 (570)
+........++|||++++..+++||.++++.+.++++++|+.+.+|+.+|+|.+.++.+.+.|..+..+.|.+|++++|+
T Consensus 322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 401 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQL 401 (491)
T ss_pred HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHHH
Confidence 86421222367999999888999999999999999999999888889999999999999999999899999999999999
Q ss_pred HHHhhcccccchhHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHhhccCCC-CCccccccCCCCCCHHHHHhhcc
Q 008315 397 ANTVFHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSR-TETDLFYFDPDSIEWRDYFMNTH 475 (570)
Q Consensus 397 ~~~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~F~~~~w~Fd~~n~~~L~~~ls~~D-r~~~~F~fD~~~idW~~Y~~~~~ 475 (570)
+..+++...+|++.++++|+..+++++++|+||++++|.|+|+|+++|++.|+++| .|+++|+||++.|||++|++++|
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~w~f~~~n~~~l~~~~~~~d~~d~~~f~~d~~~~~w~~y~~~~~ 481 (491)
T PLN02996 402 VNIILPKRYGDKYTDLNRKIKLVMRLVDLYKPYVFFKGIFDDTNTEKLRIKRKETGKEEADMFDFDPKSIDWEDYMTNVH 481 (491)
T ss_pred HHHHhhhccChHHHHHHHHHHHHHHHHHHhhccccceEEEccHHHHHHHHHCCccccccccEeccCcccCCHHHHHHHhh
Confidence 88855544689999999999888999999999999999999999999999999976 33449999999999999999977
Q ss_pred hhhHHHHhhc
Q 008315 476 IPGVENILQQ 485 (570)
Q Consensus 476 i~Girkyllk 485 (570)
++|+|+|++|
T Consensus 482 ~~g~~~y~~k 491 (491)
T PLN02996 482 IPGLVKYVLK 491 (491)
T ss_pred HHHHHHHhcC
Confidence 9999999987
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-83 Score=699.91 Aligned_cols=468 Identities=40% Similarity=0.707 Sum_probs=403.5
Q ss_pred chhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.|++||+||+|||||||||||++|+++||+++++|++||+|+|++++.++.+|+.+++.+.++|++|++++|..+..+..
T Consensus 112 ~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~ 191 (605)
T PLN02503 112 GIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFML 191 (605)
T ss_pred chhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccc
Confidence 48999999999999999999999999999999999999999999999999999988999999999999999876666667
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+|++++.||+++++|||++++. +.+.+++|+|||+||.++|+++++.++++|+.||.+++++|++++++++|||+||+|
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~-~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLA-DEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHH-HHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 8999999999999999988876 478889999999999999999999999999999999999999987889999999999
Q ss_pred ccCCCCCeeccccCCCC-----------------CCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 165 VAGERTGLILENPLDGA-----------------SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
|||.+.|.++|++|+.. +++|++++++++.+.... ..++++....|+++|++++++++|
T Consensus 271 VyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 346 (605)
T PLN02503 271 VNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRH----GFQSNSFAQKMKDLGLERAKLYGW 346 (605)
T ss_pred eecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhc----ccchHHHHHHhhhcccchhhhCCC
Confidence 99999889999999632 456888888776322211 224556677789999999999999
Q ss_pred CchHHHHHHHHHHHHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 228 PNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+|++||++||+++.++..++|++|+||++|.++++||+|||+++.+...+++..+++|.++.++++++...|+||||+
T Consensus 347 pNtYt~TK~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~ 426 (605)
T PLN02503 347 QDTYVFTKAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADM 426 (605)
T ss_pred CChHHHHHHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecH
Confidence 99999999999999999888999999999999999999999999996666666677789999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC-CCCCceEEeccCCCCcccHHhHHHHHhhhcccCCCCCCCCCeEEecceeeeccHHHHHHHHHHH
Q 008315 308 VVNAMIVAMVAHAKQ-PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPIEVSKIILFSSIASFHGYMQIC 386 (570)
Q Consensus 308 va~aii~a~~~~~~~-~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~~~~g~~i~~p~~~~~~~~~~~~~~~~~~ 386 (570)
|||++++|++..... ...++||||+++..||++|+++.+.+.+++.++|+....|.+++++...+..+...| +.
T Consensus 427 vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~-----~~ 501 (605)
T PLN02503 427 VVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPYMDSKGRPIHVPPMKLFSSMEDF-----SS 501 (605)
T ss_pred HHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCcccccCcceeccCceehhhHHHH-----HH
Confidence 999999996643322 234789999999999999999999999999999988655666666655555443332 23
Q ss_pred HHhhHHHHHHHHHhh--cc-cccchhHHHHHH-----HHHHHHHHHhccccccceEEEechhHHHHHhhccCCCCCcccc
Q 008315 387 YLLPLKGLQLANTVF--HN-FFKGVYNDLRKK-----VKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLF 458 (570)
Q Consensus 387 ~~lPa~~ld~~~~~~--g~-~~~~~~~kl~rk-----~~~~~~~~~~~~~F~~~~w~Fd~~n~~~L~~~ls~~Dr~~~~F 458 (570)
|. +.|.++++. |. ..++++.+.+++ ++++..+.++|+||++++|.|+|+|+++|++.|+++||+ +|
T Consensus 502 h~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ft~~~w~F~~~n~~~L~~~ms~~Dr~--~F 575 (605)
T PLN02503 502 HL----WRDALLRSGLAGMSSSDRKLSQKLENICAKSVEQAKYLASIYEPYTFYGGRFDNSNTQRLMERMSEEEKA--EF 575 (605)
T ss_pred HH----HHHHHHHHhhhcccccChHHHHHHHHHHHHHHHHHHHHHHHHhhheeCeEEEechHHHHHHHhCCHHHhh--cc
Confidence 32 456666553 31 135666666543 557788999999999999999999999999999999987 99
Q ss_pred ccCCCCCCHHHHHhhcchhhHHHHhhcCCC
Q 008315 459 YFDPDSIEWRDYFMNTHIPGVENILQQKRA 488 (570)
Q Consensus 459 ~fD~~~idW~~Y~~~~~i~Girkyllke~~ 488 (570)
+||++.|||++||+++|++|+|||++|++.
T Consensus 576 ~~D~~~idW~~Y~~~~~i~G~rky~lk~~~ 605 (605)
T PLN02503 576 GFDVGSIDWRDYITNVHIPGLRRHVMKGRG 605 (605)
T ss_pred CCCcCCCCHHHHHHHhhhhHHHHHHhccCC
Confidence 999999999999997579999999999974
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-41 Score=336.37 Aligned_cols=246 Identities=33% Similarity=0.549 Sum_probs=171.7
Q ss_pred EECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCCC
Q 008315 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISS 96 (570)
Q Consensus 17 ITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
|||||||||++|+++|+++++.+ +||||+|+++..++.+|+.+.+.+..+++...++. .+||+++.||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~--------~~ri~~v~GDl~~ 71 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDKEA--------LSRIEVVEGDLSQ 71 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHH--------TTTEEEEE--TTS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhhhh--------hccEEEEeccccc
Confidence 79999999999999999998877 99999999999999999987777777776664322 4899999999999
Q ss_pred CCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCeeccc
Q 008315 97 EDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILEN 176 (570)
Q Consensus 97 ~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~i~E~ 176 (570)
|+|||+++++ +.+.+++|+||||||.++|..+++++.++||.||++++++|.+. +.++|+|+||+++.+...+.+.|+
T Consensus 72 ~~lGL~~~~~-~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~ 149 (249)
T PF07993_consen 72 PNLGLSDEDY-QELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEK 149 (249)
T ss_dssp GGGG--HHHH-HHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SS
T ss_pred cccCCChHHh-hccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCccccc
Confidence 9999998887 48889999999999999999999999999999999999999987 445999999998988876555555
Q ss_pred cCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc--CCCcEEEE
Q 008315 177 PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK--ENLSLVII 254 (570)
Q Consensus 177 ~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~--~~lp~~Iv 254 (570)
.+++.. ........++|+|..||++||+++.++. .++|++|+
T Consensus 150 ~~~~~~------------------------------------~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~ 193 (249)
T PF07993_consen 150 VYPEEE------------------------------------DDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIY 193 (249)
T ss_dssp S-HHH--------------------------------------EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEE
T ss_pred cccccc------------------------------------ccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 432100 0111223678999999999999999873 49999999
Q ss_pred eccccccCCCCCCCCcccccc-chHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 255 RPTIVSGTYKEPFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 255 RPsiV~g~~~~p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
||++|+| ++.+||.+... .+..+...+..|..+.++++++...|++|||+||++|
T Consensus 194 Rp~~i~g---~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 194 RPGIIVG---DSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp EE-EEE----SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred ecCcccc---cCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 9999999 45688888877 6666777788888888888888889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=281.11 Aligned_cols=257 Identities=19% Similarity=0.257 Sum_probs=194.5
Q ss_pred EEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCC
Q 008315 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
||||||||||++|+++|++.|+ +..|.++.|........ .+. ..+...++.||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-~~~Vr~~d~~~~~~~~~-~~~-----------------------~~~~~~~~~~Di~ 55 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-IYEVRVLDRSPPPKFLK-DLQ-----------------------KSGVKEYIQGDIT 55 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-ceEEEEcccccccccch-hhh-----------------------cccceeEEEeccc
Confidence 6999999999999999999996 56677887766543211 000 0133449999999
Q ss_pred CCCCCCChhhhHHHHhCCccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC--C
Q 008315 96 SEDLGLKDSNLKEELWNELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT--G 171 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~--g 171 (570)
+ .+.+..+++++|+|||+||.+... .+.+..+++||.||++++++|++. ++++|||+||+.++++.. +
T Consensus 56 d-------~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~ 127 (280)
T PF01073_consen 56 D-------PESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGD 127 (280)
T ss_pred c-------HHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCC
Confidence 4 455568999999999999987664 457788999999999999999998 999999999999987621 1
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC----
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE---- 247 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~---- 247 (570)
.+.+. +|..+.+ ..+.+.|+.||++||+++.++..
T Consensus 128 ~~~~~--dE~~~~~---------------------------------------~~~~~~Y~~SK~~AE~~V~~a~~~~~~ 166 (280)
T PF01073_consen 128 PIING--DEDTPYP---------------------------------------SSPLDPYAESKALAEKAVLEANGSELK 166 (280)
T ss_pred CcccC--CcCCccc---------------------------------------ccccCchHHHHHHHHHHHHhhcccccc
Confidence 11000 1111110 03567899999999999998732
Q ss_pred ---CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcC---
Q 008315 248 ---NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAK--- 321 (570)
Q Consensus 248 ---~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~--- 321 (570)
.+.++++||+.|||+....+ ...++..+..|......++++...|+++|++||.|++.|+.....
T Consensus 167 ~g~~l~t~~lRP~~IyGp~d~~~---------~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~ 237 (280)
T PF01073_consen 167 NGGRLRTCALRPAGIYGPGDQRL---------VPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGK 237 (280)
T ss_pred cccceeEEEEeccEEeCcccccc---------cchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccc
Confidence 49999999999999876321 113334455565667788889999999999999999999875432
Q ss_pred -CCCCCceEEeccCCCCccc-HHhHHHHHhhhcccCCC
Q 008315 322 -QPSDANIYHVGSSLRNPVT-LVSILDYGFVYFTKKPW 357 (570)
Q Consensus 322 -~~~~~~iyn~~s~~~~~it-~~el~~~~~~~~~~~p~ 357 (570)
....|++|+|+++ .|+. +.|+...+.+.+|..+.
T Consensus 238 ~~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 238 PERVAGQAYFITDG--EPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred cccCCCcEEEEECC--CccCcHHHHHHHHHHHCCCCCC
Confidence 2345899999998 8999 99999999999998754
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=260.57 Aligned_cols=260 Identities=22% Similarity=0.287 Sum_probs=207.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|++|||||.||||+++++.+++..++ .+|.++..-.-... .+.+. .+. ..++..+++|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-~~v~~~DkLTYAgn-~~~l~-~~~-------------------~~~~~~fv~~ 58 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-DHVVNLDKLTYAGN-LENLA-DVE-------------------DSPRYRFVQG 58 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-ceEEEEecccccCC-HHHHH-hhh-------------------cCCCceEEec
Confidence 57999999999999999999999887 34555543211100 11111 111 1357899999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|++ +.+....+++ ++|+|+|.||..+.+ ..+...+++|+.||.+||++|++.-...+|+||||..|||
T Consensus 59 DI~-------D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG 131 (340)
T COG1088 59 DIC-------DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG 131 (340)
T ss_pred ccc-------CHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc
Confidence 999 5565667777 599999999998776 3467789999999999999999973335899999999999
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
+.. .++..++|.+|+ .+.++|..|||.+..+++.+
T Consensus 132 ~l~--~~~~~FtE~tp~-----------------------------------------~PsSPYSASKAasD~lVray~~ 168 (340)
T COG1088 132 DLG--LDDDAFTETTPY-----------------------------------------NPSSPYSASKAASDLLVRAYVR 168 (340)
T ss_pred ccc--CCCCCcccCCCC-----------------------------------------CCCCCcchhhhhHHHHHHHHHH
Confidence 853 123356666665 35789999999999999998
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..|+|++|.|+|+-|||+..|- ..+..++..+..|....++|++.+++||++|+|-++|+-..+.. ...
T Consensus 169 TYglp~~ItrcSNNYGPyqfpE-------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k----g~~ 237 (340)
T COG1088 169 TYGLPATITRCSNNYGPYQFPE-------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK----GKI 237 (340)
T ss_pred HcCCceEEecCCCCcCCCcCch-------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc----CcC
Confidence 6699999999999999998652 44557788899999999999999999999999999999888752 234
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccCCC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~ 357 (570)
|++||++++ +..+.-|+++.+++.+++...
T Consensus 238 GE~YNIgg~--~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 238 GETYNIGGG--NERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred CceEEeCCC--ccchHHHHHHHHHHHhCcccc
Confidence 899999999 889999999999999998654
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=277.84 Aligned_cols=267 Identities=16% Similarity=0.190 Sum_probs=194.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|+++|++ |+++.|...+... .+. ++ ....+ .....++.+
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~---V~~~d~~~~~~~~--~~~-~~---------~~~~~----~~~~~~~~~ 73 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQT---VIGLDNFSTGYQH--NLD-DV---------RTSVS----EEQWSRFIF 73 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCE---EEEEeCCCCcchh--hhh-hh---------hhccc----cccCCceEE
Confidence 57799999999999999999999999864 5788775433211 111 00 00000 011246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.||+.+ .+.+..+++++|+|||+||..... +......++|+.||.+++++|++. ++++|||+||+.+|
T Consensus 74 ~~~Di~d-------~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vy 145 (348)
T PRK15181 74 IQGDIRK-------FTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTY 145 (348)
T ss_pred EEccCCC-------HHHHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhh
Confidence 9999994 333457788999999999975432 345567899999999999999997 89999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
|... +.+..|+.+. .+.+.|+.||.++|.++..+
T Consensus 146 g~~~----~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~ 180 (348)
T PRK15181 146 GDHP----DLPKIEERIG-----------------------------------------RPLSPYAVTKYVNELYADVFA 180 (348)
T ss_pred CCCC----CCCCCCCCCC-----------------------------------------CCCChhhHHHHHHHHHHHHHH
Confidence 8642 1111111111 24568999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...|...+ . ..+..++..+..|....+.+++++.+|++||||+|++++.++..... ..
T Consensus 181 ~~~~~~~~~lR~~~vyGp~~~~~~~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~-~~ 256 (348)
T PRK15181 181 RSYEFNAIGLRYFNVFGRRQNPNGAY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL-AS 256 (348)
T ss_pred HHhCCCEEEEEecceeCcCCCCCCcc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc-cC
Confidence 4589999999999999876432111 0 12345555666676667779999999999999999999887753211 12
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
.+++||++++ .++|+.|+++.+.+.++.
T Consensus 257 ~~~~yni~~g--~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 257 KNKVYNVAVG--DRTSLNELYYLIRDGLNL 284 (348)
T ss_pred CCCEEEecCC--CcEeHHHHHHHHHHHhCc
Confidence 3689999998 899999999999988764
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=276.63 Aligned_cols=279 Identities=23% Similarity=0.351 Sum_probs=201.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++||+||||||+|.+|+++||.+-+ .+||||||.++.+.+.+|+++.+- .+..+. +...++|+++.|
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~---~~~~~~--------e~~~~ri~vv~g 67 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSD--AKVICLVRAQSDEAALARLEKTFD---LYRHWD--------ELSADRVEVVAG 67 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhh---hhhhhh--------hhhcceEEEEec
Confidence 5899999999999999999998754 789999999999999999985332 122222 334689999999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++|+|||++.++. .+.++||.|||+||.+++-.++.+....||.||.+++++|... +.|.|+||||..|.....+.
T Consensus 68 Dl~e~~lGL~~~~~~-~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~ 145 (382)
T COG3320 68 DLAEPDLGLSERTWQ-ELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYS 145 (382)
T ss_pred ccccccCCCCHHHHH-HHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccC
Confidence 999999999999985 9999999999999999999999999999999999999999986 78999999999998654321
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cCCCcE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-KENLSL 251 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~~~lp~ 251 (570)
-.+.-..+.. . +...-..+.++|+.||+.||.+++++ ..|+|+
T Consensus 146 ~~~~~~~~~~-------------------------~-----------~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv 189 (382)
T COG3320 146 NFTVDFDEIS-------------------------P-----------TRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPV 189 (382)
T ss_pred CCcccccccc-------------------------c-----------cccccCccCCCcchhHHHHHHHHHHHhhcCCCe
Confidence 0000000000 0 00112257899999999999999988 569999
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHHh-cCCCceeecCCCceeecchHHHHHHHHHHHHHHhc------C-C-
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASA-QGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA------K-Q- 322 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~-~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~------~-~- 322 (570)
+|+||+.|.|..+ .|-.........++.++. .|.. | +.+...|.+|+|.++.++........ . .
T Consensus 190 ~I~Rpg~I~gds~---tG~~n~~D~~~Rlv~~~~~lg~~---P-~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~ 262 (382)
T COG3320 190 TIFRPGYITGDSR---TGALNTRDFLTRLVLGLLQLGIA---P-DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHS 262 (382)
T ss_pred EEEecCeeeccCc---cCccccchHHHHHHHHHHHhCCC---C-CcccchhhCccceeeEEeehhhhhHHHHHHHhccCc
Confidence 9999999999876 343343344555555443 2333 2 23445666776666665544333221 0 1
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhh
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFV 350 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~ 350 (570)
...-..|+ .......+...++.+...+
T Consensus 263 ~~~f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 263 DIRFNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cchhhhee-cccCCCccchhHHHHhHhh
Confidence 11113444 2222378888999888876
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.8e-31 Score=256.31 Aligned_cols=258 Identities=22% Similarity=0.322 Sum_probs=204.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++||||||+||||++.+.+|++.|++| .++..-..+... -+. ...+.++.|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~v---vV~DNL~~g~~~--~v~------------------------~~~~~f~~g 51 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEV---VVLDNLSNGHKI--ALL------------------------KLQFKFYEG 51 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeE---EEEecCCCCCHH--Hhh------------------------hccCceEEe
Confidence 589999999999999999999999876 343332222110 000 011589999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCccc---CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFDE---RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+. |...++++++ ++|.|||+||.....| .+-+.++.||.||..|++++++. +++.||+.|||.+||
T Consensus 52 Di~-------D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG 123 (329)
T COG1087 52 DLL-------DRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYG 123 (329)
T ss_pred ccc-------cHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcC
Confidence 999 6676777775 5999999999876554 45667999999999999999998 899999999999999
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
... ..|++|+.+. .+.|+|+.||.+.|+++..+
T Consensus 124 ~p~----~~PI~E~~~~-----------------------------------------~p~NPYG~sKlm~E~iL~d~~~ 158 (329)
T COG1087 124 EPT----TSPISETSPL-----------------------------------------APINPYGRSKLMSEEILRDAAK 158 (329)
T ss_pred CCC----CcccCCCCCC-----------------------------------------CCCCcchhHHHHHHHHHHHHHH
Confidence 865 2455554444 35799999999999999987
Q ss_pred cCCCcEEEEeccccccCCCC-CCCCccccccchHHHHHHHhcCCCceee--------cCCCceeecchHHHHHHHHHHHH
Q 008315 246 KENLSLVIIRPTIVSGTYKE-PFPGWVEDLKTINALFVASAQGNLPCLV--------GETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~-p~~gw~~~~~~~~~~i~~~~~G~~~~~~--------~~~~~~~d~VpVDdva~aii~a~ 316 (570)
..++.++++|-.++.|+..+ .+.-|..+.....+++...+.|....+. .|+..++|+|||.|+|+|.+.|+
T Consensus 159 a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al 238 (329)
T COG1087 159 ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLAL 238 (329)
T ss_pred hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHH
Confidence 66799999999999998654 2445666777777778888888766432 45789999999999999999999
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
....+ .+...+|||++| +-.|..|+++.+.+..|+.
T Consensus 239 ~~L~~-~g~~~~~NLG~G--~G~SV~evi~a~~~vtg~~ 274 (329)
T COG1087 239 KYLKE-GGSNNIFNLGSG--NGFSVLEVIEAAKKVTGRD 274 (329)
T ss_pred HHHHh-CCceeEEEccCC--CceeHHHHHHHHHHHhCCc
Confidence 87654 333479999999 8999999999999998864
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-30 Score=258.44 Aligned_cols=268 Identities=19% Similarity=0.180 Sum_probs=203.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+|||||||||++|++.||.+||.| .+.+|+..+....+.+. ++- ...+++..+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V---~gtVR~~~~~k~~~~L~-~l~------------------~a~~~l~l~ 62 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTV---RGTVRDPEDEKKTEHLR-KLE------------------GAKERLKLF 62 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEE---EEEEcCcchhhhHHHHH-hcc------------------cCcccceEE
Confidence 67999999999999999999999999865 69999887754433333 111 113679999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccC--HHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDER--YDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~--~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
.+||+ +.+..+..++++|.|||+|+++.|+.. ..+.++.+|.||.++|++|++.+.++|+|++||..+...
T Consensus 63 ~aDL~-------d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~ 135 (327)
T KOG1502|consen 63 KADLL-------DEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRY 135 (327)
T ss_pred ecccc-------ccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhcc
Confidence 99999 455567899999999999999998643 557899999999999999999977999999999877654
Q ss_pred CCCee-ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 169 RTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
+.... +..+++|...- |++.... .-+-|..||.+||+..+++
T Consensus 136 ~~~~~~~~~vvdE~~ws---------------------d~~~~~~--------------~~~~Y~~sK~lAEkaAw~fa~ 180 (327)
T KOG1502|consen 136 NGPNIGENSVVDEESWS---------------------DLDFCRC--------------KKLWYALSKTLAEKAAWEFAK 180 (327)
T ss_pred CCcCCCCCcccccccCC---------------------cHHHHHh--------------hHHHHHHHHHHHHHHHHHHHH
Confidence 31111 12233333322 2222221 1267999999999999988
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++.+.+-|+.|+||.-.| ..+....++..+.+|.....+ +....+|+|+|||+|.+.|.+.+. .
T Consensus 181 e~~~~lv~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E~~~----a 247 (327)
T KOG1502|consen 181 ENGLDLVTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALEKPS----A 247 (327)
T ss_pred hCCccEEEecCCceECCCccc------ccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHcCcc----c
Confidence 567999999999999987654 344555667778888654443 334459999999999999997433 3
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccCCCC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~ 358 (570)
.+.|.|++. ..++.|+++.+.+.+...+..
T Consensus 248 ~GRyic~~~---~~~~~ei~~~l~~~~P~~~ip 277 (327)
T KOG1502|consen 248 KGRYICVGE---VVSIKEIADILRELFPDYPIP 277 (327)
T ss_pred CceEEEecC---cccHHHHHHHHHHhCCCCCCC
Confidence 568999885 456999999999998887644
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-29 Score=282.51 Aligned_cols=265 Identities=24% Similarity=0.413 Sum_probs=194.5
Q ss_pred CEEEEECCccHhHHHHHHHHHH--hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILR--VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~--~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|+|||||||||||++|+++|++ .| .+|++++|+... .++. .+ ....+ ..+++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g---~~V~~l~R~~~~----~~~~-~~---------~~~~~-------~~~v~~~ 56 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE---ATVHVLVRRQSL----SRLE-AL---------AAYWG-------ADRVVPL 56 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC---CEEEEEECcchH----HHHH-HH---------HHhcC-------CCcEEEE
Confidence 4799999999999999999995 45 467899995422 1221 11 01110 1578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.||+++++++++.++. +.+ +++|+||||||..++........++|+.||.+++++|++. ++++|||+||..+++...
T Consensus 57 ~~Dl~~~~~~~~~~~~-~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~ 133 (657)
T PRK07201 57 VGDLTEPGLGLSEADI-AEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYE 133 (657)
T ss_pred ecccCCccCCcCHHHH-HHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCcc
Confidence 9999999998876665 355 8999999999998877777788899999999999999997 789999999999998654
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
+..+|...++ ...+.+.|+.||+.+|+++.+ ..+++
T Consensus 134 ~~~~e~~~~~-------------------------------------------~~~~~~~Y~~sK~~~E~~~~~-~~g~~ 169 (657)
T PRK07201 134 GVFREDDFDE-------------------------------------------GQGLPTPYHRTKFEAEKLVRE-ECGLP 169 (657)
T ss_pred Cccccccchh-------------------------------------------hcCCCCchHHHHHHHHHHHHH-cCCCc
Confidence 3333321110 003457899999999999986 35899
Q ss_pred EEEEeccccccCCCCCCCCccccccchH---HHHHHHhc-CCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTIN---ALFVASAQ-GNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~---~~i~~~~~-G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
++|+||+.|||+.. .|..+++.+.. .++..... .....+.+.+....+++||||+|++++.++.. ....+
T Consensus 170 ~~ilRp~~v~G~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~---~~~~g 243 (657)
T PRK07201 170 WRVYRPAVVVGDSR---TGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK---DGRDG 243 (657)
T ss_pred EEEEcCCeeeecCC---CCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC---cCCCC
Confidence 99999999999764 23333322222 22222211 11112345566788999999999999888752 22236
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++||++++ +++++.|+++.+.+.++..+
T Consensus 244 ~~~ni~~~--~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 244 QTFHLTDP--KPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred CEEEeCCC--CCCcHHHHHHHHHHHhCCCc
Confidence 89999998 89999999999999988754
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-29 Score=263.81 Aligned_cols=285 Identities=21% Similarity=0.253 Sum_probs=189.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.|+|||||||||||++|+++|+++| + +|+++.|+.... .++. . . +. .....++++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~---~V~~l~r~~~~~---~~l~----~---------~-~~---~~~~~~~~~ 69 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH---KVLALDVYNDKI---KHLL----E---------P-DT---VPWSGRIQF 69 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC---EEEEEecCchhh---hhhh----c---------c-cc---ccCCCCeEE
Confidence 45799999999999999999999984 4 457777753211 1110 0 0 00 001246899
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK---FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+++ .+..+.+++++|+|||+||... +.....+.+..|+.|+.+++++|++. + ++|||+||+++|
T Consensus 70 ~~~Dl~d-------~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vY 140 (386)
T PLN02427 70 HRINIKH-------DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVY 140 (386)
T ss_pred EEcCCCC-------hHHHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeee
Confidence 9999994 4444577889999999999753 23344456789999999999999986 5 899999999999
Q ss_pred CCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
|...+ .++|. .++.++..... .+|+... ........+.+.|+.||.++|+++..+
T Consensus 141 g~~~~~~~~e~-----~p~~~~~~~~~------------~~e~~~~-------~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 196 (386)
T PLN02427 141 GKTIGSFLPKD-----HPLRQDPAFYV------------LKEDESP-------CIFGSIEKQRWSYACAKQLIERLIYAE 196 (386)
T ss_pred CCCcCCCCCcc-----ccccccccccc------------ccccccc-------cccCCCCccccchHHHHHHHHHHHHHH
Confidence 86432 12221 22211000000 0000000 000000123467999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCcc---ccc-cchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHh
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWV---EDL-KTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~---~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
..+++++|+||+.|||+.....+|-. ... ..+..++..+..|....+.++++..+|+|||||+|++++.++...
T Consensus 197 ~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~ 276 (386)
T PLN02427 197 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 276 (386)
T ss_pred HhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc
Confidence 45899999999999999764333210 011 112233345556665567788888999999999999999888632
Q ss_pred cCCCCCCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 320 ~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
. ...+++||++++. .++++.|+++.+.+.++.
T Consensus 277 ~--~~~g~~yni~~~~-~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 277 A--RANGHIFNVGNPN-NEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred c--cccCceEEeCCCC-CCccHHHHHHHHHHHhcc
Confidence 1 1136799999861 489999999999998875
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=279.97 Aligned_cols=265 Identities=25% Similarity=0.292 Sum_probs=195.0
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+||++|+|||||||||||++|+++|++.|+++ +|+++.|...... ...+. .. ....++
T Consensus 2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~-~V~~~d~~~~~~~-~~~l~-------------~~-------~~~~~v 59 (668)
T PLN02260 2 ATYEPKNILITGAAGFIASHVANRLIRNYPDY-KIVVLDKLDYCSN-LKNLN-------------PS-------KSSPNF 59 (668)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCC-EEEEEeCCCccch-hhhhh-------------hc-------ccCCCe
Confidence 58999999999999999999999999987654 5677776431111 11111 00 012468
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCCccc---CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW--NELDVMVNSAAITKFDE---RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
+++.+|+++ .+....++ .++|+|||+||....+. ...+.+++|+.||.+++++|++.+.+++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 60 KFVKGDIAS-------ADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred EEEECCCCC-------hHHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 999999995 33333333 57999999999876543 3456789999999999999999855899999999
Q ss_pred ccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
+.+||....... ....|+.+. .+.+.|+.||..+|+++
T Consensus 133 ~~vyg~~~~~~~-~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~aE~~v 170 (668)
T PLN02260 133 DEVYGETDEDAD-VGNHEASQL-----------------------------------------LPTNPYSATKAGAEMLV 170 (668)
T ss_pred hHHhCCCccccc-cCccccCCC-----------------------------------------CCCCCcHHHHHHHHHHH
Confidence 999986531100 000111111 24578999999999999
Q ss_pred HHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 243 QQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.++ ..+++++|+||++|||+...+ . .....++..+..|....++++++..+++|||+|+|+++..++..
T Consensus 171 ~~~~~~~~l~~vilR~~~VyGp~~~~-----~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~-- 241 (668)
T PLN02260 171 MAYGRSYGLPVITTRGNNVYGPNQFP-----E--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK-- 241 (668)
T ss_pred HHHHHHcCCCEEEECcccccCcCCCc-----c--cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc--
Confidence 876 458999999999999986532 1 12234455556666556778999999999999999999888752
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
...+++||++++ +++++.|+++.+.+.+|..+
T Consensus 242 --~~~~~vyni~~~--~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 242 --GEVGHVYNIGTK--KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred --CCCCCEEEECCC--CeeEHHHHHHHHHHHhCCCC
Confidence 223679999998 89999999999999988654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-28 Score=257.60 Aligned_cols=266 Identities=19% Similarity=0.245 Sum_probs=189.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|++. |+ .|+++.|+.... .++. + ..+++++.
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~---~V~~~~r~~~~~---~~~~----------------~-------~~~~~~~~ 52 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDW---EVYGMDMQTDRL---GDLV----------------N-------HPRMHFFE 52 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCC---eEEEEeCcHHHH---HHhc----------------c-------CCCeEEEe
Confidence 58999999999999999999986 44 457787753210 0110 0 24689999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITK---FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+|+.+ +.+....+++++|+|||+||... ........+++|+.|+.+++++|++. + ++|||+||+.+||.
T Consensus 53 ~Dl~~------~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~ 124 (347)
T PRK11908 53 GDITI------NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGM 124 (347)
T ss_pred CCCCC------CHHHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeecc
Confidence 99973 22334567789999999999643 23455677899999999999999987 5 79999999999986
Q ss_pred CCCeeccccCCCCC-CCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 169 RTGLILENPLDGAS-GLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g~i~E~~~~e~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
..+ .++.|+. +++. .....+.+.|+.||..+|+++..+
T Consensus 125 ~~~----~~~~ee~~~~~~-----------------------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~ 165 (347)
T PRK11908 125 CPD----EEFDPEASPLVY-----------------------------------GPINKPRWIYACSKQLMDRVIWAYGM 165 (347)
T ss_pred CCC----cCcCcccccccc-----------------------------------CcCCCccchHHHHHHHHHHHHHHHHH
Confidence 432 1222111 1100 000134568999999999999886
Q ss_pred cCCCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+...-..+ -..+..++..+..|....+.+++++.+|+|||+|+|++++.++..... ..
T Consensus 166 ~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-~~ 244 (347)
T PRK11908 166 EEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDG-VA 244 (347)
T ss_pred HcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccc-cC
Confidence 4689999999999999876442110011 112334555666666556667888999999999999999998863211 12
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ .+.+|+.|+++.+.+.++..|
T Consensus 245 ~g~~yni~~~-~~~~s~~e~~~~i~~~~~~~~ 275 (347)
T PRK11908 245 SGKIYNIGNP-KNNHSVRELANKMLELAAEYP 275 (347)
T ss_pred CCCeEEeCCC-CCCcCHHHHHHHHHHHhcCcc
Confidence 3689999985 247999999999999988655
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=256.97 Aligned_cols=279 Identities=24% Similarity=0.358 Sum_probs=198.7
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|+++|+. .+|++++|+.......+|+.+.+-...+ .. ......+++++.||
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~-~~V~~l~R~~~~~~~~~~l~~~~~~~~~---------~~-~~~~~~~v~~~~~D 69 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQ-AKVICLVRAASEEHAMERLREALRSYRL---------WQ-EDLARERIEVVAGD 69 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCC-CEEEEEEccCCHHHHHHHHHHHHHHhCC---------CC-chhhhCCEEEEeCC
Confidence 5899999999999999999998854 4789999988766666666532211000 00 00001579999999
Q ss_pred CCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCee
Q 008315 94 ISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLI 173 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~i 173 (570)
++++.+|+++++.. .+.+++|+|||+||.+.+..+++...++|+.|+.+++++|.+. +.++|||+||..+++.....
T Consensus 70 ~~~~~~gl~~~~~~-~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~- 146 (367)
T TIGR01746 70 LSEPRLGLSDAEWE-RLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLS- 146 (367)
T ss_pred cCcccCCcCHHHHH-HHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCC-
Confidence 99999999877764 7778999999999999888888888899999999999999987 77889999999998764211
Q ss_pred ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cCCCcEE
Q 008315 174 LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-KENLSLV 252 (570)
Q Consensus 174 ~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~~~lp~~ 252 (570)
...++.+... ....+.+.|+.||+.+|.++.++ ..+++++
T Consensus 147 ---~~~~~~~~~~------------------------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ 187 (367)
T TIGR01746 147 ---TVTEDDAIVT------------------------------------PPPGLAGGYAQSKWVAELLVREASDRGLPVT 187 (367)
T ss_pred ---Cccccccccc------------------------------------cccccCCChHHHHHHHHHHHHHHHhcCCCEE
Confidence 0111111100 00024578999999999999876 4589999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHh-cCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASA-QGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~-~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
++||+.|+|+.. .|..........++.... .| .++.......+++||||+|++++.++...... ..+++||+
T Consensus 188 i~Rpg~v~G~~~---~g~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~-~~~~~~~v 260 (367)
T TIGR01746 188 IVRPGRILGNSY---TGAINSSDILWRMVKGCLALG---AYPDSPELTEDLTPVDYVARAIVALSSQPAAS-AGGPVFHV 260 (367)
T ss_pred EECCCceeecCC---CCCCCchhHHHHHHHHHHHhC---CCCCCCccccCcccHHHHHHHHHHHHhCCCcc-cCCceEEe
Confidence 999999999733 222211122222333222 22 22222234678999999999999887632210 12679999
Q ss_pred ccCCCCcccHHhHHHHHhhhcccC
Q 008315 332 GSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 332 ~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++ ++++|.|+++.+.+ .|..
T Consensus 261 ~~~--~~~s~~e~~~~i~~-~g~~ 281 (367)
T TIGR01746 261 VNP--EPVSLDEFLEWLER-AGYN 281 (367)
T ss_pred cCC--CCCCHHHHHHHHHH-cCCC
Confidence 998 89999999999988 5543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=263.97 Aligned_cols=253 Identities=15% Similarity=0.192 Sum_probs=187.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|||||||||||++|+++|++.|++| +++.|...+.. +.+. .+ . ...+++++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V---~~ldr~~~~~~--~~~~-~~------------~-------~~~~~~~~ 173 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEV---IVIDNFFTGRK--ENLV-HL------------F-------GNPRFELI 173 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEE---EEEeCCCCccH--hHhh-hh------------c-------cCCceEEE
Confidence 45899999999999999999999999754 67777533211 1111 00 0 01367889
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK---FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
.+|+.++ . +.++|+|||+||... ...+....+++|+.||.+++++|++. +. +|||+||.+|||
T Consensus 174 ~~Di~~~-------~-----~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg 239 (436)
T PLN02166 174 RHDVVEP-------I-----LLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYG 239 (436)
T ss_pred ECccccc-------c-----ccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhC
Confidence 9998742 1 257999999999653 23456778999999999999999997 54 899999999998
Q ss_pred CCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 168 ERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 168 ~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+..+ .++|..+.+..+. .+.+.|+.||..+|+++..+
T Consensus 240 ~~~~~p~~E~~~~~~~p~-----------------------------------------~p~s~Yg~SK~~aE~~~~~y~ 278 (436)
T PLN02166 240 DPLEHPQKETYWGNVNPI-----------------------------------------GERSCYDEGKRTAETLAMDYH 278 (436)
T ss_pred CCCCCCCCccccccCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHH
Confidence 7532 2333322111111 23468999999999999887
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||++|||+...+..+ .....++..+..|....++++++..+|+|+|+|+|++++.++.. .
T Consensus 279 ~~~~l~~~ilR~~~vYGp~~~~~~~-----~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~---~-- 348 (436)
T PLN02166 279 RGAGVEVRIARIFNTYGPRMCLDDG-----RVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG---E-- 348 (436)
T ss_pred HHhCCCeEEEEEccccCCCCCCCcc-----chHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc---C--
Confidence 458999999999999986532111 12335666677777667789999999999999999999988752 1
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
...+||++++ +++|+.|+++.+.+.++..
T Consensus 349 ~~giyNIgs~--~~~Si~ela~~I~~~~g~~ 377 (436)
T PLN02166 349 HVGPFNLGNP--GEFTMLELAEVVKETIDSS 377 (436)
T ss_pred CCceEEeCCC--CcEeHHHHHHHHHHHhCCC
Confidence 1469999998 8999999999999998764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-28 Score=254.84 Aligned_cols=257 Identities=17% Similarity=0.243 Sum_probs=186.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||||++|+++|+++|+++ + ++++..........+. .. ....++.++.+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~--v-~~~~~~~~~~~~~~~~-------------~~-------~~~~~~~~~~~ 58 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDA--V-VVVDKLTYAGNLMSLA-------------PV-------AQSERFAFEKV 58 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCE--E-EEEecCccccchhhhh-------------hc-------ccCCceEEEEC
Confidence 689999999999999999999998754 2 3333321111111111 00 00136788999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHc--------cCceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKC--------VKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~lk~fV~ 159 (570)
|+++ .+..+.+++ ++|+|||+||..... +..+..+++|+.||.+++++|.+. +++++|||
T Consensus 59 Dl~d-------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~ 131 (355)
T PRK10217 59 DICD-------RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHH 131 (355)
T ss_pred CCcC-------hHHHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEE
Confidence 9995 333446666 499999999986543 345778999999999999999863 35789999
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||..+|+...+. ..+.+|+.+. .+.+.|+.||..+|
T Consensus 132 ~SS~~vyg~~~~~--~~~~~E~~~~-----------------------------------------~p~s~Y~~sK~~~e 168 (355)
T PRK10217 132 ISTDEVYGDLHST--DDFFTETTPY-----------------------------------------APSSPYSASKASSD 168 (355)
T ss_pred ecchhhcCCCCCC--CCCcCCCCCC-----------------------------------------CCCChhHHHHHHHH
Confidence 9999999853210 1112221111 23578999999999
Q ss_pred HHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 240 MIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 240 ~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
.++..+ ..+++++++||+.|||+...| . .....++.....|....+.++++..+|++||+|+|.+++.++.
T Consensus 169 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~ 241 (355)
T PRK10217 169 HLVRAWLRTYGLPTLITNCSNNYGPYHFP-E------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVAT 241 (355)
T ss_pred HHHHHHHHHhCCCeEEEeeeeeeCCCCCc-c------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHh
Confidence 999876 458999999999999987532 1 1233445555666555667899999999999999999998886
Q ss_pred HhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 318 ~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. ...+++||++++ +++|+.|+++.+.+.+++.
T Consensus 242 ~----~~~~~~yni~~~--~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 242 T----GKVGETYNIGGH--NERKNLDVVETICELLEEL 273 (355)
T ss_pred c----CCCCCeEEeCCC--CcccHHHHHHHHHHHhccc
Confidence 3 123679999998 8999999999999988864
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=261.94 Aligned_cols=285 Identities=14% Similarity=0.125 Sum_probs=190.8
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe---cCCccc-----------HHHHHHHHHhhhhhHHHH
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR---AADTES-----------AALRFQNEVLAKDLFNVL 71 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR---~~~~~~-----------~~~rl~~~l~~~~~f~~l 71 (570)
...-+++|+|||||||||||++|+++|++.|++| +++.| +..... ..+++. .+
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V---~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~ 107 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEV---AIVDNLCRRLFDHQLGLDSLTPIASIHERVR----------RW 107 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeE---EEEeccccccccccccccccccccchHHHHH----------HH
Confidence 3445688999999999999999999999999765 55543 211100 011111 01
Q ss_pred HhhhcccccccccCceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc----c--CHHHHHHHHHHHHHH
Q 008315 72 KEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD----E--RYDVAFGINTLGAIH 143 (570)
Q Consensus 72 ~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~----~--~~~~~~~~Nv~gt~~ 143 (570)
... ...+++++.+|+++ .+..+.+++ ++|+|||+||..... + .....+++|+.||.+
T Consensus 108 ~~~--------~~~~v~~v~~Dl~d-------~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~n 172 (442)
T PLN02572 108 KEV--------SGKEIELYVGDICD-------FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLN 172 (442)
T ss_pred HHh--------hCCcceEEECCCCC-------HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHH
Confidence 110 01368899999994 444456666 589999999874321 1 123457899999999
Q ss_pred HHHHHHHccCce-EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 144 LVNFAKKCVKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 144 ll~~a~~~~~lk-~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++++|++. +++ +|||+||..+||.....++|...+++.... |+.. .
T Consensus 173 lleaa~~~-gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~---------------------e~~~-----------~ 219 (442)
T PLN02572 173 VLFAIKEF-APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGR---------------------TDTL-----------P 219 (442)
T ss_pred HHHHHHHh-CCCccEEEEecceecCCCCCCCcccccccccccc---------------------cccc-----------c
Confidence 99999987 665 899999999998643234443222110000 0000 0
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh--cCCCcEEEEeccccccCCCCCC---CCccc-----c-c-cchHHHHHHHhcCCCc
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEPF---PGWVE-----D-L-KTINALFVASAQGNLP 290 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~---~gw~~-----~-~-~~~~~~i~~~~~G~~~ 290 (570)
....+.+.|+.||..+|.++..+ ..+++++++||+.|||+...+. +.-+. + + ..+..++..+..|...
T Consensus 220 ~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i 299 (442)
T PLN02572 220 YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPL 299 (442)
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCc
Confidence 00134578999999999999876 4589999999999999975431 10000 0 0 2233455666677655
Q ss_pred eeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhh---cccC
Q 008315 291 CLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY---FTKK 355 (570)
Q Consensus 291 ~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~---~~~~ 355 (570)
.+.+++++.+|+++|||+|++++.++..... .+...+||+++ .++++.|+++.+.+. +|..
T Consensus 300 ~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~-~g~~~i~Nigs---~~~si~el~~~i~~~~~~~g~~ 363 (442)
T PLN02572 300 TVYGKGGQTRGFLDIRDTVRCIEIAIANPAK-PGEFRVFNQFT---EQFSVNELAKLVTKAGEKLGLD 363 (442)
T ss_pred eecCCCCEEECeEEHHHHHHHHHHHHhChhh-cCceeEEEeCC---CceeHHHHHHHHHHHHHhhCCC
Confidence 6778999999999999999999998863211 11136899975 469999999999998 6643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=261.72 Aligned_cols=254 Identities=15% Similarity=0.193 Sum_probs=185.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||||||++|++.|+++|++| +++.|...+. .+.+.. .....++++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V---~~ld~~~~~~--~~~~~~--------------------~~~~~~~~~ 171 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSV---IVVDNFFTGR--KENVMH--------------------HFSNPNFEL 171 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEE---EEEeCCCccc--hhhhhh--------------------hccCCceEE
Confidence 367999999999999999999999999754 5666643221 111110 001246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK---FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+.++ ++.++|+|||+||... ...+....+++|+.||.+++++|++. +. +|||+||.++|
T Consensus 172 i~~D~~~~------------~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VY 237 (442)
T PLN02206 172 IRHDVVEP------------ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY 237 (442)
T ss_pred EECCccCh------------hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHh
Confidence 99998732 2257999999999653 23456778999999999999999997 54 89999999999
Q ss_pred CCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+.... ...|..+.+..|. ...+.|+.||..+|+++..+
T Consensus 238 g~~~~~p~~E~~~~~~~P~-----------------------------------------~~~s~Y~~SK~~aE~~~~~y 276 (442)
T PLN02206 238 GDPLQHPQVETYWGNVNPI-----------------------------------------GVRSCYDEGKRTAETLTMDY 276 (442)
T ss_pred CCCCCCCCCccccccCCCC-----------------------------------------CccchHHHHHHHHHHHHHHH
Confidence 86431 2233322111111 22478999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+..+ .....++..+..+....+++++++.+|+++|+|+|++++.++.. ..
T Consensus 277 ~~~~g~~~~ilR~~~vyGp~~~~~~~-----~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~---~~ 348 (442)
T PLN02206 277 HRGANVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG---EH 348 (442)
T ss_pred HHHhCCCeEEEEeccccCCCCCcccc-----chHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc---CC
Confidence 458999999999999986432111 12335566666666557788999999999999999999988752 11
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
..+||++++ +++|+.|+++.+.+.++..
T Consensus 349 --~g~yNIgs~--~~~sl~Elae~i~~~~g~~ 376 (442)
T PLN02206 349 --VGPFNLGNP--GEFTMLELAKVVQETIDPN 376 (442)
T ss_pred --CceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 458999998 8999999999999988753
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=250.58 Aligned_cols=263 Identities=17% Similarity=0.210 Sum_probs=183.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.|++|||||||||||++++++|+++|++ |++++|+.......+.+. . ..+ ...+++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~----~---------~~~------~~~~~~~~ 61 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYT---VKATVRDLTDRKKTEHLL----A---------LDG------AKERLKLF 61 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCCcchHHHHHHH----h---------ccC------CCCceEEE
Confidence 5799999999999999999999999964 578888765432111111 0 000 02468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
.+|+++ .+..+.+++++|+|||+||.+... ++....+++|+.||.+++++|++.+++++||++||..++..
T Consensus 62 ~~Dl~~-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~ 134 (322)
T PLN02986 62 KADLLE-------ESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLF 134 (322)
T ss_pred ecCCCC-------cchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheec
Confidence 999995 333457788999999999986543 33445689999999999999998657899999999876532
Q ss_pred CCCee-ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 169 RTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
..... ++..++|+.+.++.. .....+.|+.||.++|.+++++
T Consensus 135 ~~~~~~~~~~~~E~~~~~p~~-----------------------------------~~~~~~~Y~~sK~~aE~~~~~~~~ 179 (322)
T PLN02986 135 RQPPIEANDVVDETFFSDPSL-----------------------------------CRETKNWYPLSKILAENAAWEFAK 179 (322)
T ss_pred CCccCCCCCCcCcccCCChHH-----------------------------------hhccccchHHHHHHHHHHHHHHHH
Confidence 11111 122233322222110 0023578999999999999887
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.|||+...|..+. ...++..+..|.. ..+ ....++|+|+|+|++++.++.... .
T Consensus 180 ~~~~~~~~lrp~~v~Gp~~~~~~~~------~~~~~~~~~~g~~--~~~--~~~~~~v~v~Dva~a~~~al~~~~----~ 245 (322)
T PLN02986 180 DNGIDMVVLNPGFICGPLLQPTLNF------SVELIVDFINGKN--LFN--NRFYRFVDVRDVALAHIKALETPS----A 245 (322)
T ss_pred HhCCeEEEEcccceeCCCCCCCCCc------cHHHHHHHHcCCC--CCC--CcCcceeEHHHHHHHHHHHhcCcc----c
Confidence 3589999999999999876542111 1234445555543 122 456799999999999999886321 1
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
+.+||++ + .++|+.|+++.+.+.++.
T Consensus 246 ~~~yni~-~--~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 246 NGRYIID-G--PIMSVNDIIDILRELFPD 271 (322)
T ss_pred CCcEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 3489994 4 579999999999998864
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-28 Score=274.30 Aligned_cols=273 Identities=21% Similarity=0.265 Sum_probs=196.0
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
-..|.++|+|||||||||||++|+++|++. |++ |+++.|...... ++. ..
T Consensus 309 ~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~---V~~l~r~~~~~~---~~~-----------------------~~ 359 (660)
T PRK08125 309 ACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYE---VYGLDIGSDAIS---RFL-----------------------GH 359 (660)
T ss_pred hhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcE---EEEEeCCchhhh---hhc-----------------------CC
Confidence 456788999999999999999999999985 554 567888543210 100 02
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC---cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK---FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~---f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
.+++++.||++++ .+..+.+++++|+|||+||... +.......+++|+.||.+++++|++. + ++|||+|
T Consensus 360 ~~~~~~~gDl~d~------~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~S 431 (660)
T PRK08125 360 PRFHFVEGDISIH------SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPS 431 (660)
T ss_pred CceEEEeccccCc------HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEc
Confidence 4688999999952 3333466789999999999754 33445677899999999999999997 5 7999999
Q ss_pred cccccCCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 162 TAYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 162 Ta~v~~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
|+++||...+ .++|+ .+..+. . ....+.+.|+.||.++|+
T Consensus 432 S~~vyg~~~~~~~~E~-----~~~~~~--------------------------------~--p~~~p~s~Yg~sK~~~E~ 472 (660)
T PRK08125 432 TSEVYGMCTDKYFDED-----TSNLIV--------------------------------G--PINKQRWIYSVSKQLLDR 472 (660)
T ss_pred chhhcCCCCCCCcCcc-----cccccc--------------------------------C--CCCCCccchHHHHHHHHH
Confidence 9999986421 23332 111000 0 000234579999999999
Q ss_pred HHHHh--cCCCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 241 IMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 241 ~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++..+ ..+++++++||++|||+..........+ ......++..+..|....+.+++++.+|+|+|+|+|++++.++.
T Consensus 473 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~ 552 (660)
T PRK08125 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIE 552 (660)
T ss_pred HHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHh
Confidence 99886 4489999999999999875332111000 11234455666666665677889999999999999999999886
Q ss_pred HhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 318 ~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.... ...+++||++++ ++++|+.|+++.+.+.++..+
T Consensus 553 ~~~~-~~~g~iyni~~~-~~~~s~~el~~~i~~~~g~~~ 589 (660)
T PRK08125 553 NKDN-RCDGQIINIGNP-DNEASIRELAEMLLASFEKHP 589 (660)
T ss_pred cccc-ccCCeEEEcCCC-CCceeHHHHHHHHHHHhccCc
Confidence 3211 123689999987 137999999999999988643
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=254.08 Aligned_cols=257 Identities=16% Similarity=0.122 Sum_probs=185.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|++.|++.|++ |.++.|........ ....+.++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~---V~~v~r~~~~~~~~---------------------------~~~~~~~~ 69 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHY---IIASDWKKNEHMSE---------------------------DMFCHEFH 69 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCE---EEEEEecccccccc---------------------------ccccceEE
Confidence 5799999999999999999999999875 46777754321000 00135678
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC---cc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK---FD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~---f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
.+|+++ .+....+++++|+|||+||.+. +. .........|+.|+.+++++|++. ++++|||+||..+|
T Consensus 70 ~~Dl~d-------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vY 141 (370)
T PLN02695 70 LVDLRV-------MENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIY 141 (370)
T ss_pred ECCCCC-------HHHHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhc
Confidence 899994 3334466789999999999753 21 233455788999999999999987 88999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+......++.++.|+.+. ...+.+.|+.+|..+|+++..+
T Consensus 142 g~~~~~~~~~~~~E~~~~---------------------------------------p~~p~s~Yg~sK~~~E~~~~~~~ 182 (370)
T PLN02695 142 PEFKQLETNVSLKESDAW---------------------------------------PAEPQDAYGLEKLATEELCKHYT 182 (370)
T ss_pred CCccccCcCCCcCcccCC---------------------------------------CCCCCCHHHHHHHHHHHHHHHHH
Confidence 865321111122221100 0034578999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccc-cchHHHHHHHhc-CCCceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDL-KTINALFVASAQ-GNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~-~~~~~~i~~~~~-G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++++||+.|||+... |..+. ..+..++..+.. +....++++++..+++|||+|+|++++.++...
T Consensus 183 ~~~g~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~--- 255 (370)
T PLN02695 183 KDFGIECRIGRFHNIYGPFGT----WKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD--- 255 (370)
T ss_pred HHhCCCEEEEEECCccCCCCC----ccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc---
Confidence 45899999999999998542 21111 123345544444 334456789999999999999999998876521
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.+++||++++ .++++.|+++.+.+..+..
T Consensus 256 --~~~~~nv~~~--~~~s~~el~~~i~~~~g~~ 284 (370)
T PLN02695 256 --FREPVNIGSD--EMVSMNEMAEIALSFENKK 284 (370)
T ss_pred --CCCceEecCC--CceeHHHHHHHHHHHhCCC
Confidence 1468999998 8999999999998887764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=246.90 Aligned_cols=263 Identities=16% Similarity=0.161 Sum_probs=180.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+|||||||||||++|+++|++.|++ |.+++|+.........+. ... ...++++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~-------------~~~------~~~~~~~~~ 60 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYT---VKATVRDPNDPKKTEHLL-------------ALD------GAKERLHLF 60 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCE---EEEEEcCCCchhhHHHHH-------------hcc------CCCCceEEE
Confidence 4789999999999999999999999975 467888654321111111 000 002468999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc--c
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV--A 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v--~ 166 (570)
.+|++++ +..+.+++++|+|||+||..... ++....+++|+.|+.+++++|.+..++++||++||+.+ |
T Consensus 61 ~~Dl~~~-------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y 133 (322)
T PLN02662 61 KANLLEE-------GSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAY 133 (322)
T ss_pred eccccCc-------chHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcC
Confidence 9999953 33457788999999999976432 33346789999999999999988657899999999764 5
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+... ..++.+.+|+.+..+... ....+.|+.||.++|+++..+
T Consensus 134 ~~~~-~~~~~~~~E~~~~~p~~~-----------------------------------~~~~~~Y~~sK~~~E~~~~~~~ 177 (322)
T PLN02662 134 NGKP-LTPDVVVDETWFSDPAFC-----------------------------------EESKLWYVLSKTLAEEAAWKFA 177 (322)
T ss_pred CCcC-CCCCCcCCcccCCChhHh-----------------------------------hcccchHHHHHHHHHHHHHHHH
Confidence 4321 001112222222221100 022468999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+..+ .....+..+..|.. . .++..+|+|+|+|+|++++.++....
T Consensus 178 ~~~~~~~~~lRp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~-~---~~~~~~~~i~v~Dva~a~~~~~~~~~---- 243 (322)
T PLN02662 178 KENGIDMVTINPAMVIGPLLQPTLN------TSAEAILNLINGAQ-T---FPNASYRWVDVRDVANAHIQAFEIPS---- 243 (322)
T ss_pred HHcCCcEEEEeCCcccCCCCCCCCC------chHHHHHHHhcCCc-c---CCCCCcCeEEHHHHHHHHHHHhcCcC----
Confidence 458999999999999987544211 12233444444432 1 23467899999999999999886321
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
....||++ + .++++.|+++.+.+.++..
T Consensus 244 ~~~~~~~~-g--~~~s~~e~~~~i~~~~~~~ 271 (322)
T PLN02662 244 ASGRYCLV-E--RVVHYSEVVKILHELYPTL 271 (322)
T ss_pred cCCcEEEe-C--CCCCHHHHHHHHHHHCCCC
Confidence 13478886 4 6799999999999887643
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=247.83 Aligned_cols=259 Identities=17% Similarity=0.196 Sum_probs=180.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|+++|++ |.+++|+....... .+. ++ . . ...+++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~-~~~-~~---------~--------~-~~~~~~~~ 65 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYT---VKGTVRNPDDPKNT-HLR-EL---------E--------G-GKERLILC 65 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCE---EEEEeCCchhhhHH-HHH-Hh---------h--------C-CCCcEEEE
Confidence 6889999999999999999999999965 56788865321110 010 00 0 0 01468889
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc-cccCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA-YVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa-~v~~~~ 169 (570)
.+|+++ .+....+++++|+|||+||.. .......+++|+.||.+++++|++. ++++|||+||. .+|+..
T Consensus 66 ~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~--~~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~ 135 (342)
T PLN02214 66 KADLQD-------YEALKAAIDGCDGVFHTASPV--TDDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDP 135 (342)
T ss_pred ecCcCC-------hHHHHHHHhcCCEEEEecCCC--CCCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccC
Confidence 999994 344457788999999999975 3456778999999999999999987 78999999996 577643
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~ 247 (570)
... .+.+++|+.+.+.+. ...+.+.|+.||..+|+++..+ ..
T Consensus 136 ~~~-~~~~~~E~~~~~~~~-----------------------------------~~~p~~~Y~~sK~~aE~~~~~~~~~~ 179 (342)
T PLN02214 136 NRD-PEAVVDESCWSDLDF-----------------------------------CKNTKNWYCYGKMVAEQAAWETAKEK 179 (342)
T ss_pred CCC-CCcccCcccCCChhh-----------------------------------ccccccHHHHHHHHHHHHHHHHHHHc
Confidence 210 011222222111000 0024578999999999999886 45
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++++||+.|||+...+. . ......+.....|.... . ++..+|+|+|+|+|++++.++... ..+.
T Consensus 180 g~~~v~lRp~~vyGp~~~~~--~----~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~----~~~g 246 (342)
T PLN02214 180 GVDLVVLNPVLVLGPPLQPT--I----NASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAP----SASG 246 (342)
T ss_pred CCcEEEEeCCceECCCCCCC--C----CchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCc----ccCC
Confidence 89999999999999865431 1 11112223444554432 2 345789999999999999998632 1245
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
.||+++ .++++.|+++.+.+.++.
T Consensus 247 ~yn~~~---~~~~~~el~~~i~~~~~~ 270 (342)
T PLN02214 247 RYLLAE---SARHRGEVVEILAKLFPE 270 (342)
T ss_pred cEEEec---CCCCHHHHHHHHHHHCCC
Confidence 899976 368999999999998754
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=247.27 Aligned_cols=265 Identities=15% Similarity=0.167 Sum_probs=178.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|||||||||||++|+++|++.|++ |++++|..........+. ..+ . ..++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~--------------~~~----~--~~~~~~ 63 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYA---VNTTVRDPENQKKIAHLR--------------ALQ----E--LGDLKI 63 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCE---EEEEECCCCCHHHHHHHH--------------hcC----C--CCceEE
Confidence 46899999999999999999999999864 567888754321111100 000 0 135889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
+.+|+++ .+....+++++|+|||+||...+. ++....+++|+.|+.+++++|.+..++++||++||+.+++
T Consensus 64 ~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 64 FGADLTD-------EESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred EEcCCCC-------hHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 9999995 333457778999999999976543 2334567999999999999998865689999999999987
Q ss_pred CCC-----CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 168 ERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 168 ~~~-----g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
... ..++|+..+. .. .+.. ...+.+.|+.||..+|+++
T Consensus 137 ~~~~~~~~~~~~E~~~~~------~~--------------------~~~~-----------~~~p~~~Y~~sK~~~E~~~ 179 (338)
T PLN00198 137 INKLSGTGLVMNEKNWTD------VE--------------------FLTS-----------EKPPTWGYPASKTLAEKAA 179 (338)
T ss_pred ccCCCCCCceeccccCCc------hh--------------------hhhh-----------cCCccchhHHHHHHHHHHH
Confidence 431 1233432110 00 0000 0024567999999999999
Q ss_pred HHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeec-CC----CceeecchHHHHHHHHHHH
Q 008315 243 QQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG-ET----KTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~-~~----~~~~d~VpVDdva~aii~a 315 (570)
..+ ..+++++++||+.|||+...+. . .....++..+..|....+.+ ++ +..+|+|||||+|++++.+
T Consensus 180 ~~~~~~~~~~~~~~R~~~vyGp~~~~~---~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~ 253 (338)
T PLN00198 180 WKFAEENNIDLITVIPTLMAGPSLTSD---I---PSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFL 253 (338)
T ss_pred HHHHHhcCceEEEEeCCceECCCccCC---C---CCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHH
Confidence 886 3589999999999999875321 1 11112233444443322222 11 2247999999999999988
Q ss_pred HHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 316 ~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
+.... .+..|+ +++ .++++.++++.+.+.++.
T Consensus 254 ~~~~~----~~~~~~-~~~--~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 254 AEKES----ASGRYI-CCA--ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred hhCcC----cCCcEE-Eec--CCCCHHHHHHHHHHHCCC
Confidence 76321 134685 444 578999999999887654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=246.84 Aligned_cols=264 Identities=16% Similarity=0.174 Sum_probs=188.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
|++||+|||||||||||++|++.|++.|++ |+++.|.........+ . +. ...++.
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~---~---------~~----------~~~~~~ 55 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELGAE---VYGYSLDPPTSPNLFE---L---------LN----------LAKKIE 55 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCCCE---EEEEeCCCccchhHHH---H---------Hh----------hcCCce
Confidence 678999999999999999999999999965 4677776543221110 0 00 013577
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
++.+|+++ .+....+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++...+++||++||+
T Consensus 56 ~~~~Dl~~-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~ 128 (349)
T TIGR02622 56 DHFGDIRD-------AAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD 128 (349)
T ss_pred EEEccCCC-------HHHHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech
Confidence 89999995 333446665 479999999964332 345677899999999999999887337899999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
.+|+.... ..+++|+.+. .+.+.|+.||..+|.++.
T Consensus 129 ~vyg~~~~---~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~ 164 (349)
T TIGR02622 129 KCYRNDEW---VWGYRETDPL-----------------------------------------GGHDPYSSSKACAELVIA 164 (349)
T ss_pred hhhCCCCC---CCCCccCCCC-----------------------------------------CCCCcchhHHHHHHHHHH
Confidence 99975321 0112221111 245789999999999997
Q ss_pred Hhc---------CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 244 QSK---------ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 244 ~~~---------~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+. .+++++++||+.|||+.... . -+....++..+..|... ..++++..+|++||||+|++++.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~-~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~ 237 (349)
T TIGR02622 165 SYRSSFFGVANFHGIKIASARAGNVIGGGDWA-----E-DRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLL 237 (349)
T ss_pred HHHHHhhcccccCCCcEEEEccCcccCCCcch-----h-hhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHH
Confidence 752 28999999999999975311 1 02233555556666543 34678899999999999999998
Q ss_pred HHHHhcCCC-CCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 315 AMVAHAKQP-SDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~-~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++......+ ..+++||++++...+++..++++.+.+.++..
T Consensus 238 ~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~ 279 (349)
T TIGR02622 238 LAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGD 279 (349)
T ss_pred HHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCC
Confidence 876432111 12479999986447899999999998876543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-27 Score=246.68 Aligned_cols=261 Identities=18% Similarity=0.189 Sum_probs=185.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.|++ |+++.|...... .+++. .+. +..+ .....+++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~-~~~~~-~~~---------~~~~----~~~~~~~~~~~~ 62 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYE---VHGLIRRSSSFN-TQRIE-HIY---------EDPH----NVNKARMKLHYG 62 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCE---EEEEecCCcccc-hhhhh-hhh---------hccc----cccccceeEEEe
Confidence 68999999999999999999999864 577888754211 11221 110 0000 000145889999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCc---eEEEEEeccc
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKL---KVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---k~fV~vSTa~ 164 (570)
|+++ .+....+++ ++|+|||+||..... +.....+++|+.||.+++++|++. ++ ++|||+||..
T Consensus 63 Dl~d-------~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~ 134 (343)
T TIGR01472 63 DLTD-------SSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSE 134 (343)
T ss_pred ccCC-------HHHHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHH
Confidence 9994 444456666 479999999976432 334566788999999999999986 44 4899999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+||... +.+.+|+.+. .+.+.|+.||..+|.++..
T Consensus 135 vyg~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~ 169 (343)
T TIGR01472 135 LYGKVQ----EIPQNETTPF-----------------------------------------YPRSPYAAAKLYAHWITVN 169 (343)
T ss_pred hhCCCC----CCCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 998642 1122322222 2457899999999999987
Q ss_pred h--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCC-CceeecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 245 S--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGN-LPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+ ..++++++.|+..++|+.... ..+. .....++..+..|. ...+.++++..+|++||||+|++++.++...
T Consensus 170 ~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~-- 243 (343)
T TIGR01472 170 YREAYGLFAVNGILFNHESPRRGE--NFVT--RKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD-- 243 (343)
T ss_pred HHHHhCCceEEEeecccCCCCCCc--cccc--hHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC--
Confidence 7 347899999999999875311 1111 12233444555565 3355688999999999999999999888632
Q ss_pred CCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 322 ~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. +++||++++ .++|+.|+++.+.+.+++.
T Consensus 244 -~--~~~yni~~g--~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 244 -K--PDDYVIATG--ETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred -C--CccEEecCC--CceeHHHHHHHHHHHcCCC
Confidence 1 358999998 8999999999999988854
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=243.15 Aligned_cols=263 Identities=17% Similarity=0.194 Sum_probs=182.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.|++ |++++|+......... +.. ..+ ...+++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~----~~~---------~~~------~~~~~~~~ 61 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYT---INATVRDPKDRKKTDH----LLA---------LDG------AKERLKLF 61 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCCcchhhHHH----HHh---------ccC------CCCceEEE
Confidence 4799999999999999999999999965 4677776543211111 000 000 01468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
.+|+++ .+..+.+++++|+|||+||..... +.+...+++|+.|+.+++++|.+..+.++||++||..+++
T Consensus 62 ~~D~~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 62 KADLLD-------EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred eCCCCC-------chHHHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 999995 343457788999999999975432 3456778999999999999998854678999999987765
Q ss_pred CCCCe-eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 168 ERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 168 ~~~g~-i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
..... -.+.+++|+.+.++... ....+.|+.||..+|+++..+
T Consensus 135 ~~~~~~~~~~~~~E~~~~~p~~~-----------------------------------~~~~~~Y~~sK~~~E~~~~~~~ 179 (325)
T PLN02989 135 APETKLGPNDVVDETFFTNPSFA-----------------------------------EERKQWYVLSKTLAEDAAWRFA 179 (325)
T ss_pred cCCccCCCCCccCcCCCCchhHh-----------------------------------cccccchHHHHHHHHHHHHHHH
Confidence 42110 01122333333332100 012467999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+..+ ....++..+..|.... + ....++++|+|+|++++.++....
T Consensus 180 ~~~~~~~~ilR~~~vyGp~~~~~~~------~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~~~~---- 245 (325)
T PLN02989 180 KDNEIDLIVLNPGLVTGPILQPTLN------FSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALETPS---- 245 (325)
T ss_pred HHcCCeEEEEcCCceeCCCCCCCCC------chHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhcCcc----
Confidence 458999999999999987654211 2224455555554321 2 345799999999999998876321
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
.+.+||++ + .++|+.|+++.+.+.++.
T Consensus 246 ~~~~~ni~-~--~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 246 ANGRYIID-G--PVVTIKDIENVLREFFPD 272 (325)
T ss_pred cCceEEEe-c--CCCCHHHHHHHHHHHCCC
Confidence 13589995 4 589999999999998864
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=243.59 Aligned_cols=259 Identities=17% Similarity=0.221 Sum_probs=183.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||||++|+++|++.|..+ ++++.|..... ..+++. .+ .+ ..+++++.+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~--v~~~~~~~~~~-~~~~~~-~~------------~~-------~~~~~~~~~ 57 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDS--VVNVDKLTYAG-NLESLA-DV------------SD-------SERYVFEHA 57 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCe--EEEecCCCccc-hHHHHH-hc------------cc-------CCceEEEEe
Confidence 479999999999999999999998642 33333322111 111111 00 00 145788999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHc--------cCceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKC--------VKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~--------~~lk~fV~ 159 (570)
|+++ .+....+++ ++|+|||+||.+... ...+..+++|+.|+.+++++|++. +++++|||
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~ 130 (352)
T PRK10084 58 DICD-------RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHH 130 (352)
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEE
Confidence 9995 333446655 489999999986432 345778999999999999999874 24679999
Q ss_pred EecccccCCCCC--eecc-c---cCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 160 VSTAYVAGERTG--LILE-N---PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 160 vSTa~v~~~~~g--~i~E-~---~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
+||.++|+.... .+.+ . +++|+.+. .+.+.|+.
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~-----------------------------------------~p~~~Y~~ 169 (352)
T PRK10084 131 ISTDEVYGDLPHPDEVENSEELPLFTETTAY-----------------------------------------APSSPYSA 169 (352)
T ss_pred ecchhhcCCCCccccccccccCCCccccCCC-----------------------------------------CCCChhHH
Confidence 999999986321 0000 0 11221111 34678999
Q ss_pred HHHHHHHHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 234 TKTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 234 sK~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
||+.+|+++..+ ..+++++++||+.|||+...+ . .....++..+..|....+.++++..+|+|||+|+|++
T Consensus 170 sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a 242 (352)
T PRK10084 170 SKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-E------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARA 242 (352)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-c------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHH
Confidence 999999999876 458999999999999986422 1 1233444555556554667889999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++.++.. ...+++||++++ +++++.++++.+.+.++..
T Consensus 243 ~~~~l~~----~~~~~~yni~~~--~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 243 LYKVVTE----GKAGETYNIGGH--NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHhc----CCCCceEEeCCC--CcCcHHHHHHHHHHHhccc
Confidence 9888752 123689999998 8999999999999988763
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-27 Score=239.84 Aligned_cols=245 Identities=18% Similarity=0.196 Sum_probs=169.9
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||++|+++|++.|+++ ++++|....... .. ..+.+|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~---v~~~~~~~~~~~---~~----------------------------~~~~~~~ 47 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTK---FV----------------------------NLVDLDI 47 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCce---EEEecCCCcchH---HH----------------------------hhhhhhh
Confidence 8999999999999999999998643 466665432110 00 0111233
Q ss_pred CCCCCCCChhhhHHHHh-----CCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 95 SSEDLGLKDSNLKEELW-----NELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-----~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
.+.. +.++..+.++ .++|+|||+||..... ......++.|+.||.+++++|++. ++ +|||+||+++|+.
T Consensus 48 ~d~~---~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~ 122 (308)
T PRK11150 48 ADYM---DKEDFLAQIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGG 122 (308)
T ss_pred hhhh---hHHHHHHHHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCc
Confidence 2110 0122233333 2699999999864322 234457899999999999999997 65 6999999999986
Q ss_pred CCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
..+ .++|. .+. .+.+.|+.||..+|++++++
T Consensus 123 ~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 123 RTDDFIEER-----EYE-----------------------------------------KPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred CCCCCCccC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHHH
Confidence 432 22222 111 34578999999999999887
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCcee-ecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL-VGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~-~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+ .+.+.. ....++..+..|....+ .++++..+|++||||+|++++.++... .
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~-~~~~~~--~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~---~- 229 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGH-KGSMAS--VAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG---V- 229 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCC-CCccch--hHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC---C-
Confidence 458999999999999987533 121110 11122345566654434 466778999999999999998887531 1
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
+.+||++++ .++|+.|+++.+.+..+.
T Consensus 230 -~~~yni~~~--~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 230 -SGIFNCGTG--RAESFQAVADAVLAYHKK 256 (308)
T ss_pred -CCeEEcCCC--CceeHHHHHHHHHHHhCC
Confidence 469999998 889999999999998874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=239.43 Aligned_cols=228 Identities=22% Similarity=0.181 Sum_probs=166.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.| +| +++.|.. ..+.|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V---~~~~~~~--------------------------------------~~~~~ 38 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NL---IALDVHS--------------------------------------TDYCG 38 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CE---EEecccc--------------------------------------ccccC
Confidence 579999999999999999999987 43 5565531 12458
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+..+.+++ ++|+||||||....+ ...+.++++|+.|+.+++++|++. +. +|||+||.+||+
T Consensus 39 Dl~d-------~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~ 109 (299)
T PRK09987 39 DFSN-------PEGVAETVRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFP 109 (299)
T ss_pred CCCC-------HHHHHHHHHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEEC
Confidence 9884 444446666 589999999987543 345677899999999999999998 54 799999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
... +.+++|+++. .+.+.|+.||..+|+++..+..
T Consensus 110 ~~~----~~p~~E~~~~-----------------------------------------~P~~~Yg~sK~~~E~~~~~~~~ 144 (299)
T PRK09987 110 GTG----DIPWQETDAT-----------------------------------------APLNVYGETKLAGEKALQEHCA 144 (299)
T ss_pred CCC----CCCcCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhCC
Confidence 643 2345444332 3458899999999999987543
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecC--CCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE--TKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~--~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
+.+|+||++|||+... +....++..+..|....+.++ ++...+...+|+++.++..++... ..
T Consensus 145 --~~~ilR~~~vyGp~~~---------~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~----~~ 209 (299)
T PRK09987 145 --KHLIFRTSWVYAGKGN---------NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKP----EV 209 (299)
T ss_pred --CEEEEecceecCCCCC---------CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccC----CC
Confidence 6799999999997531 112344444445555556666 455445566777888777665321 12
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
..+||++++ +++|+.|+++.+.+.++
T Consensus 210 ~giyni~~~--~~~s~~e~~~~i~~~~~ 235 (299)
T PRK09987 210 AGLYHLVAS--GTTTWHDYAALVFEEAR 235 (299)
T ss_pred CCeEEeeCC--CCccHHHHHHHHHHHHH
Confidence 469999998 89999999999977644
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=238.84 Aligned_cols=270 Identities=19% Similarity=0.223 Sum_probs=187.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES-AALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++++|+|||||||+|++|+++|++.|++ |+++.|...... ..+++. .... ....++.
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~~~~~~~~~~~~~~~-------------~~~~-----~~~~~~~ 61 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYK---VVVIDNLDNSSEEALRRVK-------------ELAG-----DLGDNLV 61 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCcchHHHHHHHH-------------Hhhc-----ccCccce
Confidence 46799999999999999999999998854 567776543211 111211 0000 0124678
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
++.+|+++ .+..+.+++ ++|+|||+||..... ......+++|+.++.+++++|++. ++++||++||+
T Consensus 62 ~~~~D~~~-------~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~ 133 (352)
T PLN02240 62 FHKVDLRD-------KEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSA 133 (352)
T ss_pred EEecCcCC-------HHHHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccH
Confidence 89999994 333445554 689999999975432 345677999999999999999887 78999999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
.+|+...+ .+++|+.+. .+.+.|+.||..+|+++.
T Consensus 134 ~vyg~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 168 (352)
T PLN02240 134 TVYGQPEE----VPCTEEFPL-----------------------------------------SATNPYGRTKLFIEEICR 168 (352)
T ss_pred HHhCCCCC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHH
Confidence 99975421 223333332 235789999999999998
Q ss_pred Hh---cCCCcEEEEeccccccCCCCCCCCccc-c-ccchHHHHHHHhcCCCce--eec------CCCceeecchHHHHHH
Q 008315 244 QS---KENLSLVIIRPTIVSGTYKEPFPGWVE-D-LKTINALFVASAQGNLPC--LVG------ETKTIMDVIPVDMVVN 310 (570)
Q Consensus 244 ~~---~~~lp~~IvRPsiV~g~~~~p~~gw~~-~-~~~~~~~i~~~~~G~~~~--~~~------~~~~~~d~VpVDdva~ 310 (570)
.+ ..+++++++|++.|||+.....-|... . ......++..+..|..+. +.+ ++...+++|+|+|+|+
T Consensus 169 ~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~ 248 (352)
T PLN02240 169 DIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLAD 248 (352)
T ss_pred HHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHH
Confidence 65 246899999999999975421111110 0 012223444444444322 333 6788999999999999
Q ss_pred HHHHHHHHhcC-CCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 311 AMIVAMVAHAK-QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 311 aii~a~~~~~~-~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++.++..... ....+++||++++ .++|++|+++.+.+.++..
T Consensus 249 a~~~a~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~ 292 (352)
T PLN02240 249 GHIAALRKLFTDPDIGCEAYNLGTG--KGTSVLEMVAAFEKASGKK 292 (352)
T ss_pred HHHHHHhhhhhccCCCCceEEccCC--CcEeHHHHHHHHHHHhCCC
Confidence 99988864311 1123579999998 8999999999999998864
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=236.98 Aligned_cols=257 Identities=22% Similarity=0.311 Sum_probs=186.8
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.|+.. +|+++.|...... .+++. .+. ...++.++.+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~-~v~~~~~~~~~~~-~~~~~-~~~-------------------~~~~~~~~~~D 58 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDA-EVIVLDKLTYAGN-LENLA-DLE-------------------DNPRYRFVKGD 58 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCC-EEEEecCCCcchh-hhhhh-hhc-------------------cCCCcEEEEcC
Confidence 58999999999999999999987543 4566665322111 11111 000 01367889999
Q ss_pred CCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 94 ISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+++ .+....++++ +|+|||+||....+ +..+..+++|+.|+.+++++|++...-.++||+||.++++.
T Consensus 59 l~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 59 IGD-------RELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred CcC-------HHHHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 995 4444567776 99999999986543 34667789999999999999988522237999999999986
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~ 246 (570)
... ..+++|..+. .+.+.|+.+|+.+|.++..+ .
T Consensus 132 ~~~---~~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~ 167 (317)
T TIGR01181 132 LEK---GDAFTETTPL-----------------------------------------APSSPYSASKAASDHLVRAYHRT 167 (317)
T ss_pred CCC---CCCcCCCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHH
Confidence 431 0123222221 23468999999999999876 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|||+...+ . .....++..+..|....+.++++...+++|+||+|+++..++.. ...+
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~----~~~~ 236 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFP-----E--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK----GRVG 236 (317)
T ss_pred hCCCeEEEEeccccCCCCCc-----c--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC----CCCC
Confidence 68999999999999976432 1 12334556666666556678888999999999999999888752 1235
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++||++++ .++++.|+++.+.+.++..+
T Consensus 237 ~~~~~~~~--~~~s~~~~~~~i~~~~~~~~ 264 (317)
T TIGR01181 237 ETYNIGGG--NERTNLEVVETILELLGKDE 264 (317)
T ss_pred ceEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 79999998 88999999999999988643
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=227.87 Aligned_cols=258 Identities=24% Similarity=0.311 Sum_probs=194.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|..++|+||||.||+|++.+..+...-|+-..+.+.-=.=.+ . ..-++ ++. ...+-.+
T Consensus 4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s-~-~~~l~-~~~-------------------n~p~ykf 61 (331)
T KOG0747|consen 4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCS-N-LKNLE-PVR-------------------NSPNYKF 61 (331)
T ss_pred CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccc-c-cchhh-hhc-------------------cCCCceE
Confidence 455899999999999999999999987775544332111000 0 11111 111 1246689
Q ss_pred EEccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCCcc----cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--NELDVMVNSAAITKFD----ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~f~----~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
+.+|+.+ +.....++ +++|.|+|.||..+.+ +++ +....|+.+|..|++.++..+++++|||+||.
T Consensus 62 v~~di~~-------~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd 133 (331)
T KOG0747|consen 62 VEGDIAD-------ADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD 133 (331)
T ss_pred eeccccc-------hHHHHhhhccCchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEeccc
Confidence 9999994 43332333 4799999999987544 333 45788999999999999999999999999999
Q ss_pred cccCCCCCeeccccCC-CCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLD-GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~-e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
.|||+..+ .... |.+.+ .+.|+|+.||++||+++
T Consensus 134 eVYGds~~----~~~~~E~s~~-----------------------------------------nPtnpyAasKaAaE~~v 168 (331)
T KOG0747|consen 134 EVYGDSDE----DAVVGEASLL-----------------------------------------NPTNPYAASKAAAEMLV 168 (331)
T ss_pred ceecCccc----cccccccccC-----------------------------------------CCCCchHHHHHHHHHHH
Confidence 99998752 2111 21211 57899999999999999
Q ss_pred HHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 243 QQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
+.+ ..++|++++|-++||||.+-|. ..+..++.....|..-++.|++...+++++|+|+++|+-+++..
T Consensus 169 ~Sy~~sy~lpvv~~R~nnVYGP~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K-- 239 (331)
T KOG0747|consen 169 RSYGRSYGLPVVTTRMNNVYGPNQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK-- 239 (331)
T ss_pred HHHhhccCCcEEEEeccCccCCCcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc--
Confidence 998 5689999999999999987432 33345555566677778999999999999999999999888763
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
...++|||+++. .+.+..|+++.+.+.+.+.
T Consensus 240 --g~~geIYNIgtd--~e~~~~~l~k~i~eli~~~ 270 (331)
T KOG0747|consen 240 --GELGEIYNIGTD--DEMRVIDLAKDICELFEKR 270 (331)
T ss_pred --CCccceeeccCc--chhhHHHHHHHHHHHHHHh
Confidence 224899999998 8999999999999988763
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=237.20 Aligned_cols=249 Identities=23% Similarity=0.292 Sum_probs=188.1
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|++.|++| +.+.|........ ...+.++.+|
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V---~~~~r~~~~~~~~----------------------------~~~~~~~~~d 50 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDV---RGLDRLRDGLDPL----------------------------LSGVEFVVLD 50 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeE---EEEeCCCcccccc----------------------------ccccceeeec
Confidence 49999999999999999999998765 6778765443210 0357889999
Q ss_pred CCCCCCCCChhhhHHHHhCCc-cEEEEcCccCCcccC----HHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 94 ISSEDLGLKDSNLKEELWNEL-DVMVNSAAITKFDER----YDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~v-diVih~Aa~v~f~~~----~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+++ .+....+.+.+ |+|||+||....... +.....+|+.||.+++++|++. ++++|||.||.++++.
T Consensus 51 ~~~-------~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~ 122 (314)
T COG0451 51 LTD-------RDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYG 122 (314)
T ss_pred ccc-------hHHHHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECC
Confidence 984 34445666777 999999999865433 3458999999999999999995 8999999888887775
Q ss_pred C-CC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008315 169 R-TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK 246 (570)
Q Consensus 169 ~-~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 246 (570)
. .+ .++|.. .+. .+.+.|+.||..+|+.+.++.
T Consensus 123 ~~~~~~~~E~~----~~~-----------------------------------------~p~~~Yg~sK~~~E~~~~~~~ 157 (314)
T COG0451 123 DPPPLPIDEDL----GPP-----------------------------------------RPLNPYGVSKLAAEQLLRAYA 157 (314)
T ss_pred CCCCCCccccc----CCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 3 11 233321 111 233479999999999999885
Q ss_pred --CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 247 --ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 247 --~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
.+++++|+||+.|||+...+. + ++ .....++.....|.. ....+++...+++++|||+|.+++.++....
T Consensus 158 ~~~~~~~~ilR~~~vyGp~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--- 230 (314)
T COG0451 158 RLYGLPVVILRPFNVYGPGDKPD--L-SS-GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD--- 230 (314)
T ss_pred HHhCCCeEEEeeeeeeCCCCCCC--C-Cc-CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCC---
Confidence 489999999999999887542 1 11 122234444556664 5677788888999999999999999987322
Q ss_pred CCCceEEeccCCCC-cccHHhHHHHHhhhcccCCC
Q 008315 324 SDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 324 ~~~~iyn~~s~~~~-~it~~el~~~~~~~~~~~p~ 357 (570)
.. +||++++ . +.+..|+++.+.+.++..+.
T Consensus 231 -~~-~~ni~~~--~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 231 -GG-VFNIGSG--TAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred -Cc-EEEeCCC--CCcEEHHHHHHHHHHHhCCCCc
Confidence 13 9999998 5 89999999999999887653
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=229.61 Aligned_cols=254 Identities=16% Similarity=0.207 Sum_probs=193.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+||||.||||++|+++|+.+|+.| +++.--..+.. + ++.. -......+.+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~V---Ia~Dn~ftg~k-----~-n~~~----------------~~~~~~fel~ 80 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEV---IALDNYFTGRK-----E-NLEH----------------WIGHPNFELI 80 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeE---EEEecccccch-----h-hcch----------------hccCcceeEE
Confidence 46899999999999999999999999765 33332111110 0 0000 0012455667
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccC---CcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT---KFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v---~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
.-|+.. .++.+||-|||+||.. .|..+.-..+.+|+.||.+++.+|++. + ++|+|.||+.|||
T Consensus 81 ~hdv~~------------pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 81 RHDVVE------------PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYG 146 (350)
T ss_pred Eeechh------------HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccC
Confidence 677662 4678999999999975 466667777999999999999999997 4 8999999999999
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
+.. +.+.+++...+.. .-++...|...|..+|.++..|
T Consensus 147 dp~----~hpq~e~ywg~vn------------------------------------pigpr~cydegKr~aE~L~~~y~k 186 (350)
T KOG1429|consen 147 DPL----VHPQVETYWGNVN------------------------------------PIGPRSCYDEGKRVAETLCYAYHK 186 (350)
T ss_pred Ccc----cCCCccccccccC------------------------------------cCCchhhhhHHHHHHHHHHHHhhc
Confidence 854 2333222221110 0145789999999999999988
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..|+.+.|.|+.++|||... |.++ +-+..++....++..-+++|++.+.+.|.+|+|++++++.++......
T Consensus 187 ~~giE~rIaRifNtyGPrm~----~~dg-rvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~--- 258 (350)
T KOG1429|consen 187 QEGIEVRIARIFNTYGPRMH----MDDG-RVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG--- 258 (350)
T ss_pred ccCcEEEEEeeecccCCccc----cCCC-hhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC---
Confidence 66899999999999998653 4443 556677888888999999999999999999999999999998744332
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
-+|++++ +.+|+.|+++++.+..+..
T Consensus 259 --pvNiGnp--~e~Tm~elAemv~~~~~~~ 284 (350)
T KOG1429|consen 259 --PVNIGNP--GEFTMLELAEMVKELIGPV 284 (350)
T ss_pred --CcccCCc--cceeHHHHHHHHHHHcCCC
Confidence 2999999 8999999999999988544
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=235.95 Aligned_cols=263 Identities=20% Similarity=0.276 Sum_probs=199.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++.+++||||+||+|.+|+++|++.+.. ..|.++.............. .+...++..+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~-~~irv~D~~~~~~~~~~e~~---------------------~~~~~~v~~~ 60 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELK-LEIRVVDKTPTQSNLPAELT---------------------GFRSGRVTVI 60 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccc-cEEEEeccCccccccchhhh---------------------cccCCceeEE
Confidence 4679999999999999999999998853 45555554432111111100 0114678999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC--ccc-CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK--FDE-RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~--f~~-~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
.+|+. +.......++++ .|+||||... +.. ..+...++||.||+++++.|++. +++++||+||++|..
T Consensus 61 ~~D~~-------~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 61 LGDLL-------DANSISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVF 131 (361)
T ss_pred ecchh-------hhhhhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEe
Confidence 99999 455556888889 8888888753 444 36778999999999999999999 999999999999987
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc-
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK- 246 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~- 246 (570)
.....+. .+|+.|. | ..+.+.|+.||+.||+++.+..
T Consensus 132 ~g~~~~n---~~E~~p~-p--------------------------------------~~~~d~Y~~sKa~aE~~Vl~an~ 169 (361)
T KOG1430|consen 132 GGEPIIN---GDESLPY-P--------------------------------------LKHIDPYGESKALAEKLVLEANG 169 (361)
T ss_pred CCeeccc---CCCCCCC-c--------------------------------------cccccccchHHHHHHHHHHHhcC
Confidence 6431110 0111111 0 1467899999999999999874
Q ss_pred -CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc-C-CC
Q 008315 247 -ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA-K-QP 323 (570)
Q Consensus 247 -~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~-~-~~ 323 (570)
.++.++.+||++|||+.+. .-...++..+..|......++++...|+++++.||-|.+.|..... . ..
T Consensus 170 ~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~ 240 (361)
T KOG1430|consen 170 SDDLYTCALRPPGIYGPGDK---------RLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPS 240 (361)
T ss_pred CCCeeEEEEccccccCCCCc---------cccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCc
Confidence 5699999999999998763 3344667777888888888999999999999999999998887544 2 23
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcccCCC
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~ 357 (570)
..|++|+|+++ +|+...+++..+.+.+|..+.
T Consensus 241 ~~Gq~yfI~d~--~p~~~~~~~~~l~~~lg~~~~ 272 (361)
T KOG1430|consen 241 VNGQFYFITDD--TPVRFFDFLSPLVKALGYCLP 272 (361)
T ss_pred cCceEEEEeCC--CcchhhHHHHHHHHhcCCCCC
Confidence 45899999998 899888888899898887653
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=239.73 Aligned_cols=266 Identities=15% Similarity=0.182 Sum_probs=174.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|||||||||||++|+++|++.|++ |.+++|...... .+. .+. . .+ ....+++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~---V~~~~r~~~~~~---~~~-~~~---------~-~~-----~~~~~~~~v 61 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPANVK---KVK-HLL---------D-LP-----GATTRLTLW 61 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCE---EEEEEcCcchhH---HHH-HHH---------h-cc-----CCCCceEEE
Confidence 4589999999999999999999999864 567888643321 111 000 0 00 001358899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
.+|+++ .+..+.+++++|+|||+||..... ++....+++|+.||.+++++|.+..++++|||+||+.+++.
T Consensus 62 ~~Dl~d-------~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~ 134 (351)
T PLN02650 62 KADLAV-------EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNV 134 (351)
T ss_pred EecCCC-------hhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhccc
Confidence 999995 333457788999999999976543 23456789999999999999998744789999999977654
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~ 246 (570)
..+. ...++|+...+.+ ... ....+.+.|+.||..+|.++..+ .
T Consensus 135 ~~~~--~~~~~E~~~~~~~---------------------~~~-----------~~~~~~~~Y~~sK~~~E~~~~~~~~~ 180 (351)
T PLN02650 135 EEHQ--KPVYDEDCWSDLD---------------------FCR-----------RKKMTGWMYFVSKTLAEKAAWKYAAE 180 (351)
T ss_pred CCCC--CCccCcccCCchh---------------------hhh-----------ccccccchHHHHHHHHHHHHHHHHHH
Confidence 3210 0012221111000 000 00012358999999999999887 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||++|||+...+. .. ......+ ....|.... .+. ...+|+|+|+|+|++++.++.... .+
T Consensus 181 ~gi~~~ilRp~~v~Gp~~~~~---~~--~~~~~~~-~~~~~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~~~~----~~ 248 (351)
T PLN02650 181 NGLDFISIIPTLVVGPFISTS---MP--PSLITAL-SLITGNEAH-YSI-IKQGQFVHLDDLCNAHIFLFEHPA----AE 248 (351)
T ss_pred cCCeEEEECCCceECCCCCCC---CC--ccHHHHH-HHhcCCccc-cCc-CCCcceeeHHHHHHHHHHHhcCcC----cC
Confidence 589999999999999865321 00 1111111 112232211 222 234799999999999999886321 13
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
.+|+ +++ .++++.|+++.+.+.++.
T Consensus 249 ~~~i-~~~--~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 249 GRYI-CSS--HDATIHDLAKMLREKYPE 273 (351)
T ss_pred ceEE-ecC--CCcCHHHHHHHHHHhCcc
Confidence 4784 555 679999999999987653
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=225.18 Aligned_cols=229 Identities=26% Similarity=0.421 Sum_probs=176.9
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||++|+++|+++|+. |+.+.|++......+. ..++.++.+|+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~---v~~~~~~~~~~~~~~~--------------------------~~~~~~~~~dl 51 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHE---VIVLSRSSNSESFEEK--------------------------KLNVEFVIGDL 51 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTE---EEEEESCSTGGHHHHH--------------------------HTTEEEEESET
T ss_pred EEEEccCCHHHHHHHHHHHHcCCc---cccccccccccccccc--------------------------cceEEEEEeec
Confidence 799999999999999999999975 4578887765432211 13689999999
Q ss_pred CCCCCCCChhhhHHHHhCCc--cEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 95 SSEDLGLKDSNLKEELWNEL--DVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~v--diVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
. +.+..++++++. |+|||+||.... .......++.|+.++.+++++|++. ++++||++||+.+|+..
T Consensus 52 ~-------~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 52 T-------DKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDP 123 (236)
T ss_dssp T-------SHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSS
T ss_pred c-------ccccccccccccCceEEEEeeccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 9 444456777654 999999998641 1456777899999999999999998 77999999999999876
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~ 247 (570)
. +.+++|+.+. .+.+.|+.+|..+|+++.++ ..
T Consensus 124 ~----~~~~~e~~~~-----------------------------------------~~~~~Y~~~K~~~e~~~~~~~~~~ 158 (236)
T PF01370_consen 124 D----GEPIDEDSPI-----------------------------------------NPLSPYGASKRAAEELLRDYAKKY 158 (236)
T ss_dssp S----SSSBETTSGC-----------------------------------------CHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred c----cccccccccc-----------------------------------------cccccccccccccccccccccccc
Confidence 3 2223222222 23567999999999999987 34
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++++||+.|||+. .+... .-.....++..+.+|..-.++++++..++++||+|+|++++.++.... ..++
T Consensus 159 ~~~~~~~R~~~vyG~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~ 231 (236)
T PF01370_consen 159 GLRVTILRPPNVYGPG-NPNNN---SSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK---AAGG 231 (236)
T ss_dssp TSEEEEEEESEEESTT-SSSSS---TSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC---TTTE
T ss_pred cccccccccccccccc-ccccc---cccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC---CCCC
Confidence 8999999999999997 11111 112344677778888877888999999999999999999999998544 2378
Q ss_pred eEEec
Q 008315 328 IYHVG 332 (570)
Q Consensus 328 iyn~~ 332 (570)
+||++
T Consensus 232 ~yNig 236 (236)
T PF01370_consen 232 IYNIG 236 (236)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 99985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-25 Score=232.07 Aligned_cols=248 Identities=16% Similarity=0.184 Sum_probs=176.6
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||++++++|++.|+. .|+++.|..... ++. + -....+.+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~--~v~~~~~~~~~~----~~~-~-----------------------~~~~~~~~d~ 50 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGIT--DILVVDNLRDGH----KFL-N-----------------------LADLVIADYI 50 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCc--eEEEEecCCCch----hhh-h-----------------------hhheeeeccC
Confidence 699999999999999999998862 355666654321 111 0 0013456777
Q ss_pred CCCCCCCChhhhHHHHh----CCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 95 SSEDLGLKDSNLKEELW----NELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~----~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
. +.+..+.+. .++|+|||+||..... .+....+++|+.|+.+++++|++. ++ +|||+||+++|+..
T Consensus 51 ~-------~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 51 D-------KEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDG 121 (314)
T ss_pred c-------chhHHHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCC
Confidence 7 344444444 4799999999975443 345677899999999999999987 55 79999999999864
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh----
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS---- 245 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~---- 245 (570)
.+...|+ .+. ..+.+.|+.||..+|.+++++
T Consensus 122 ~~~~~e~-----~~~----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~~~~ 156 (314)
T TIGR02197 122 EAGFREG-----REL----------------------------------------ERPLNVYGYSKFLFDQYVRRRVLPE 156 (314)
T ss_pred CCCcccc-----cCc----------------------------------------CCCCCHHHHHHHHHHHHHHHHhHhh
Confidence 3222221 110 024678999999999999864
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceee------cCCCceeecchHHHHHHHHHHHHHHh
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLV------GETKTIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~------~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
..+++++++||+.|||+...+..+. . .....++..+..|....+. ++++..++++||||+|+++..++..
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~- 232 (314)
T TIGR02197 157 ALSAQVVGLRYFNVYGPREYHKGKM-A--SVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN- 232 (314)
T ss_pred ccCCceEEEEEeeccCCCCCCCCCc-c--cHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-
Confidence 3467899999999999875432111 1 1122344455555543333 4677889999999999999998864
Q ss_pred cCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
. .+++||++++ .++|+.|+++.+.+.++..+
T Consensus 233 --~--~~~~yni~~~--~~~s~~e~~~~i~~~~g~~~ 263 (314)
T TIGR02197 233 --G--VSGIFNLGTG--RARSFNDLADAVFKALGKDE 263 (314)
T ss_pred --c--cCceEEcCCC--CCccHHHHHHHHHHHhCCCC
Confidence 1 2569999998 89999999999999988654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-26 Score=237.18 Aligned_cols=261 Identities=16% Similarity=0.142 Sum_probs=184.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.|++ |+++.|....... +++. .+ ..+. .....++.++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~---V~~~~r~~~~~~~-~~~~-~~---------~~~~-----~~~~~~~~~~ 65 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYE---VHGIIRRSSNFNT-QRLD-HI---------YIDP-----HPNKARMKLH 65 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCE---EEEEecccccccc-cchh-hh---------cccc-----ccccCceEEE
Confidence 5799999999999999999999999864 5777786532111 1111 00 0000 0002468899
Q ss_pred EccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCce-----EEEEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLK-----VFVHV 160 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-----~fV~v 160 (570)
.+|+++ .+....+++ ++|+|||+||..... +.....+++|+.||.+++++|++. +++ +||++
T Consensus 66 ~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~ 137 (340)
T PLN02653 66 YGDLSD-------ASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQA 137 (340)
T ss_pred EecCCC-------HHHHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEe
Confidence 999994 333445555 479999999985432 345566799999999999999987 543 89999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||..+||.... +++|+.+. .+.+.|+.||+.+|+
T Consensus 138 Ss~~vyg~~~~-----~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~e~ 171 (340)
T PLN02653 138 GSSEMYGSTPP-----PQSETTPF-----------------------------------------HPRSPYAVAKVAAHW 171 (340)
T ss_pred ccHHHhCCCCC-----CCCCCCCC-----------------------------------------CCCChhHHHHHHHHH
Confidence 99999987542 22332222 245789999999999
Q ss_pred HHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 241 IMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 241 ~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++..+ ..+++++..|+..+||+...+ .++. .....++..+..|.. ..+.++++..+|+++|+|+|++++.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~gp~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~ 247 (340)
T PLN02653 172 YTVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQ 247 (340)
T ss_pred HHHHHHHHcCCeEEEeeeccccCCCCCc--ccch--hHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHh
Confidence 99876 347788889998888875321 1111 111222333445543 3445889999999999999999999886
Q ss_pred HhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 318 ~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.. . +++||++++ +++++.|+++.+.+..+..
T Consensus 248 ~~---~--~~~yni~~g--~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 248 QE---K--PDDYVVATE--ESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred cC---C--CCcEEecCC--CceeHHHHHHHHHHHcCCC
Confidence 31 1 468999998 8999999999999988753
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=234.62 Aligned_cols=251 Identities=21% Similarity=0.257 Sum_probs=206.0
Q ss_pred ccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 3 LGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 3 ~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
.+.+..+++||+||||||||-+|+.|++++++.+| ++|+++.|++.+....+ ..|++.+|
T Consensus 241 ~~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p--~~i~l~~~~E~~~~~i~------------~el~~~~~------ 300 (588)
T COG1086 241 TELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNP--KEIILFSRDEYKLYLID------------MELREKFP------ 300 (588)
T ss_pred HHHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCC--CEEEEecCchHHHHHHH------------HHHHhhCC------
Confidence 45688999999999999999999999999999866 78999999865432211 12333333
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
..++.++-||+. |.+..+.++++ +|+|||+||.-+. ..++.+++++||.||.|++++|.++ ++++|
T Consensus 301 -~~~~~~~igdVr-------D~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~ 371 (588)
T COG1086 301 -ELKLRFYIGDVR-------DRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKF 371 (588)
T ss_pred -CcceEEEecccc-------cHHHHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEE
Confidence 378999999999 67777889988 9999999997543 4678999999999999999999999 99999
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||..+. ++.|.|+.||.+
T Consensus 372 V~iSTDKAV-----------------------------------------------------------~PtNvmGaTKr~ 392 (588)
T COG1086 372 VLISTDKAV-----------------------------------------------------------NPTNVMGATKRL 392 (588)
T ss_pred EEEecCccc-----------------------------------------------------------CCchHhhHHHHH
Confidence 999997653 357999999999
Q ss_pred HHHHHHHhcC-----CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 238 GEMIMQQSKE-----NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~~v~~~~~-----~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
||.++..+.. +..++++|.|+|.|+...-+|- +...+..|.. .-..+++..+-|+.+.+.|+.+
T Consensus 393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPl----------Fk~QI~~Ggp-lTvTdp~mtRyfMTI~EAv~LV 461 (588)
T COG1086 393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPL----------FKKQIAEGGP-LTVTDPDMTRFFMTIPEAVQLV 461 (588)
T ss_pred HHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHH----------HHHHHHcCCC-ccccCCCceeEEEEHHHHHHHH
Confidence 9999988733 4789999999999987654443 3345566643 4457899999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCCCC
Q 008315 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~ 358 (570)
+.|+... ..|++|-+--| .|++..|+++.+.+..|..|..
T Consensus 462 lqA~a~~----~gGeifvldMG--epvkI~dLAk~mi~l~g~~~~~ 501 (588)
T COG1086 462 LQAGAIA----KGGEIFVLDMG--EPVKIIDLAKAMIELAGQTPPG 501 (588)
T ss_pred HHHHhhc----CCCcEEEEcCC--CCeEHHHHHHHHHHHhCCCCCC
Confidence 9998732 23899999998 8999999999999999977655
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=227.31 Aligned_cols=261 Identities=12% Similarity=0.066 Sum_probs=175.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|||||||||||++++++|+++|++| ++++|+.......+.+. + +. + ...++.++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V---~~~~R~~~~~~~~~~~~-~---------l~---~------~~~~~~~~ 62 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTV---HAAVQKNGETEIEKEIR-G---------LS---C------EEERLKVF 62 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEE---EEEEcCchhhhHHHHHH-h---------cc---c------CCCceEEE
Confidence 46899999999999999999999999754 67888543222111111 0 00 0 01468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
.+|+++ .+....++.++|.|+|+++.... ....+..+++|+.||.+++++|.+..++++||++||..++...
T Consensus 63 ~~Dl~d-------~~~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~ 135 (297)
T PLN02583 63 DVDPLD-------YHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWR 135 (297)
T ss_pred EecCCC-------HHHHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecc
Confidence 999995 33345778899999998876532 2335678999999999999999886568999999998664311
Q ss_pred -CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008315 170 -TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--K 246 (570)
Q Consensus 170 -~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~ 246 (570)
.+...+.+++|+++.++... . .....|+.||.++|++++++ .
T Consensus 136 ~~~~~~~~~~~E~~~~~~~~~---------------------~--------------~~~~~Y~~sK~~aE~~~~~~~~~ 180 (297)
T PLN02583 136 DDNISTQKDVDERSWSDQNFC---------------------R--------------KFKLWHALAKTLSEKTAWALAMD 180 (297)
T ss_pred cccCCCCCCCCcccCCCHHHH---------------------h--------------hcccHHHHHHHHHHHHHHHHHHH
Confidence 11111223333322221100 0 12246999999999999876 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|+|+...+.. . ...+... ..+ ....++|+|+|||++++.|+.... .+
T Consensus 181 ~gi~~v~lrp~~v~Gp~~~~~~----------~----~~~~~~~-~~~--~~~~~~v~V~Dva~a~~~al~~~~----~~ 239 (297)
T PLN02583 181 RGVNMVSINAGLLMGPSLTQHN----------P----YLKGAAQ-MYE--NGVLVTVDVNFLVDAHIRAFEDVS----SY 239 (297)
T ss_pred hCCcEEEEcCCcccCCCCCCch----------h----hhcCCcc-cCc--ccCcceEEHHHHHHHHHHHhcCcc----cC
Confidence 5899999999999998653211 0 1112111 111 234579999999999999997321 23
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCCCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~ 358 (570)
..|+|+++ +...+.++.+++.+.+...|..
T Consensus 240 ~r~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 269 (297)
T PLN02583 240 GRYLCFNH--IVNTEEDAVKLAQMLSPLIPSP 269 (297)
T ss_pred CcEEEecC--CCccHHHHHHHHHHhCCCCCCC
Confidence 47999886 5556788999999988776644
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=236.24 Aligned_cols=264 Identities=14% Similarity=0.139 Sum_probs=177.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|+++|++| ++++|+.... +.+. ++ .. .+.. .....++.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V---~~~~r~~~~~---~~l~-~l---------~~-~~~~--~~~~~~~~~ 111 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSV---RIAVDTQEDK---EKLR-EM---------EM-FGEM--GRSNDGIWT 111 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEE---EEEeCCHHHH---HHHH-HH---------hh-hccc--cccCCceEE
Confidence 578999999999999999999999999754 5677753211 1111 10 00 0000 000135788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCccc---CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDE---RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA--Y 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~---~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa--~ 164 (570)
+.+|+++ .+....+++++|.|||+|+.+.... ......++|+.|+.+++++|++..++++|||+||+ .
T Consensus 112 v~~Dl~d-------~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~ 184 (367)
T PLN02686 112 VMANLTE-------PESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLAC 184 (367)
T ss_pred EEcCCCC-------HHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHh
Confidence 9999994 4434577888999999999764322 12345688999999999999986579999999996 4
Q ss_pred ccCCC--C---CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 165 VAGER--T---GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 165 v~~~~--~---g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+|+.. . ..++|.. +.+. +. ...+.+.|+.||..+|
T Consensus 185 vyg~~~~~~~~~~i~E~~-----~~~~---------------------~~--------------~~~p~~~Y~~sK~~~E 224 (367)
T PLN02686 185 VWRQNYPHDLPPVIDEES-----WSDE---------------------SF--------------CRDNKLWYALGKLKAE 224 (367)
T ss_pred cccccCCCCCCcccCCCC-----CCCh---------------------hh--------------cccccchHHHHHHHHH
Confidence 56531 1 1122321 1110 00 0023467999999999
Q ss_pred HHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 240 MIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 240 ~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+++..+ ..+++++++||+.|||+...+. .+.. +..+..|.. .+.+++ ..++++|+|+|++++.++.
T Consensus 225 ~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--------~~~~-~~~~~~g~~-~~~g~g--~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 225 KAAWRAARGKGLKLATICPALVTGPGFFRR--------NSTA-TIAYLKGAQ-EMLADG--LLATADVERLAEAHVCVYE 292 (367)
T ss_pred HHHHHHHHhcCceEEEEcCCceECCCCCCC--------CChh-HHHHhcCCC-ccCCCC--CcCeEEHHHHHHHHHHHHh
Confidence 999876 3589999999999999864211 0111 223445543 344444 3579999999999999886
Q ss_pred HhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 318 ~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
... ....+++| ++++ .++++.|+++.+.+.++.+
T Consensus 293 ~~~-~~~~~~~y-i~~g--~~~s~~e~~~~i~~~~g~~ 326 (367)
T PLN02686 293 AMG-NKTAFGRY-ICFD--HVVSREDEAEELARQIGLP 326 (367)
T ss_pred ccC-CCCCCCcE-EEeC--CCccHHHHHHHHHHHcCCC
Confidence 321 11225688 7776 7899999999999998754
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=225.62 Aligned_cols=227 Identities=20% Similarity=0.253 Sum_probs=168.1
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||+|++|+++|+++|++| +++.|. .+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v---~~~~r~------------------------------------------~~d 35 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVV---VALTSS------------------------------------------QLD 35 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEE---EEeCCc------------------------------------------ccC
Confidence 48999999999999999999998754 565552 246
Q ss_pred CCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 94 ISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+.+ .+..+.++++ +|+|||+||..... ......+++|+.|+.+++++|++. +. +|||+||+++|+.
T Consensus 36 ~~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 36 LTD-------PEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDG 106 (287)
T ss_pred CCC-------HHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecC
Confidence 663 3333455665 59999999986543 245667899999999999999987 43 8999999999975
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCC
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKEN 248 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~ 248 (570)
.. +.+++|+.+. .+.+.|+.+|..+|+++..+ +
T Consensus 107 ~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~~K~~~E~~~~~~--~ 139 (287)
T TIGR01214 107 EG----KRPYREDDAT-----------------------------------------NPLNVYGQSKLAGEQAIRAA--G 139 (287)
T ss_pred CC----CCCCCCCCCC-----------------------------------------CCcchhhHHHHHHHHHHHHh--C
Confidence 32 2333332222 23578999999999999874 6
Q ss_pred CcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCce
Q 008315 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++|+||++|||+... . +....++..+..+..-.+.+ +...++++++|+|++++.++.... ..+++
T Consensus 140 ~~~~ilR~~~v~G~~~~------~--~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~ 206 (287)
T TIGR01214 140 PNALIVRTSWLYGGGGG------R--NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLA---RARGV 206 (287)
T ss_pred CCeEEEEeeecccCCCC------C--CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhcc---CCCCe
Confidence 79999999999998631 0 11233444444443222333 467899999999999999886421 23679
Q ss_pred EEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 329 yn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
||++++ +++++.|+++.+.+.++...
T Consensus 207 ~ni~~~--~~~s~~e~~~~i~~~~~~~~ 232 (287)
T TIGR01214 207 YHLANS--GQCSWYEFAQAIFEEAGADG 232 (287)
T ss_pred EEEECC--CCcCHHHHHHHHHHHhCccc
Confidence 999998 89999999999999988754
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=226.97 Aligned_cols=265 Identities=18% Similarity=0.250 Sum_probs=180.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.|++| +++.|...... ..+. . +.+ .+ ..++.++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V---~~~~~~~~~~~--~~~~-~---------~~~-~~-------~~~~~~~~~ 57 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDV---VILDNLCNSKR--SVLP-V---------IER-LG-------GKHPTFVEG 57 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeE---EEEecCCCchH--hHHH-H---------HHH-hc-------CCCceEEEc
Confidence 579999999999999999999998754 45555432211 1111 0 000 00 135678899
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+....+++ ++|+|||+||..... +.....+++|+.++.+++++|++. ++++||++||+.+|+
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 58 DIRN-------EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYG 129 (338)
T ss_pred cCCC-------HHHHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhC
Confidence 9994 333345554 599999999976532 345577899999999999999987 789999999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
... +.+++|+.+. +.+.+.|+.+|..+|+++.++
T Consensus 130 ~~~----~~~~~E~~~~----------------------------------------~~p~~~Y~~sK~~~E~~~~~~~~ 165 (338)
T PRK10675 130 DQP----KIPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQK 165 (338)
T ss_pred CCC----CCccccccCC----------------------------------------CCCCChhHHHHHHHHHHHHHHHH
Confidence 542 1222222221 124578999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhcCCCc--eeec------CCCceeecchHHHHHHHHHH
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQGNLP--CLVG------ETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~G~~~--~~~~------~~~~~~d~VpVDdva~aii~ 314 (570)
..+++++++|++.|||+.....-|--+. .......+..+..+... .+.+ ++.+.+++|+|+|+|++++.
T Consensus 166 ~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~ 245 (338)
T PRK10675 166 AQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVA 245 (338)
T ss_pred hcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHH
Confidence 2478999999999999742111000000 01122334444433321 2222 56788999999999999999
Q ss_pred HHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++...... ..+++||++++ +++|+.|+++.+.+.++..
T Consensus 246 ~~~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T PRK10675 246 AMEKLANK-PGVHIYNLGAG--VGSSVLDVVNAFSKACGKP 283 (338)
T ss_pred HHHhhhcc-CCCceEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 88642111 12579999988 8999999999999998864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-25 Score=231.21 Aligned_cols=238 Identities=18% Similarity=0.159 Sum_probs=167.8
Q ss_pred EEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCC
Q 008315 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
||||||||||++|++.|++.|++| +++.+. ..+|++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v---~~~~~~-----------------------------------------~~~Dl~ 36 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTN---LVLRTH-----------------------------------------KELDLT 36 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcE---EEeecc-----------------------------------------ccCCCC
Confidence 699999999999999999988764 222210 147887
Q ss_pred CCCCCCChhhhHHHHhC--CccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 96 SEDLGLKDSNLKEELWN--ELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
+ .+.++.+++ ++|+||||||.... .......++.|+.|+.+++++|++. ++++|||+||+++|+..
T Consensus 37 ~-------~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 37 R-------QADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKF 108 (306)
T ss_pred C-------HHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCC
Confidence 4 333445555 58999999997542 1345567899999999999999997 78999999999999853
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc-hHHHHHHHHHHHHHHh--c
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN-TYVFTKTMGEMIMQQS--K 246 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~~v~~~--~ 246 (570)
. +.+++|+++.+. ...+.+ .|+.||.++|+++..+ .
T Consensus 109 ~----~~~~~E~~~~~~-------------------------------------~~~p~~~~Y~~sK~~~e~~~~~~~~~ 147 (306)
T PLN02725 109 A----PQPIPETALLTG-------------------------------------PPEPTNEWYAIAKIAGIKMCQAYRIQ 147 (306)
T ss_pred C----CCCCCHHHhccC-------------------------------------CCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 2 122222111000 001233 4999999999988765 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHH----HHHhcCCCcee-ecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALF----VASAQGNLPCL-VGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i----~~~~~G~~~~~-~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
.+++++++||+.|||+... ..+ .+-.....++ .+...|....+ +++++...++|||+|+|++++.++....
T Consensus 148 ~~~~~~~~R~~~vyG~~~~-~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~- 223 (306)
T PLN02725 148 YGWDAISGMPTNLYGPHDN-FHP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS- 223 (306)
T ss_pred hCCCEEEEEecceeCCCCC-CCC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc-
Confidence 5899999999999998642 111 0001112222 22334443333 6888999999999999999998886321
Q ss_pred CCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 322 ~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
....||++++ .++++.|+++.+.+.++..
T Consensus 224 ---~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 224 ---GAEHVNVGSG--DEVTIKELAELVKEVVGFE 252 (306)
T ss_pred ---cCcceEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 2467899988 8999999999999988753
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-25 Score=229.20 Aligned_cols=261 Identities=15% Similarity=0.237 Sum_probs=172.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|||||||||||++|+++|++.|++ |+++.|+... .+++..+ +. . ..+++++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~---V~~~~r~~~~---~~~~~~~---------~~--------~--~~~~~~~ 63 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYT---VHATLRDPAK---SLHLLSK---------WK--------E--GDRLRLF 63 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHh---------hc--------c--CCeEEEE
Confidence 6789999999999999999999999864 4677775421 1111100 00 0 1468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-----cCHHH-----HHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-----ERYDV-----AFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-----~~~~~-----~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
.+|+++ .+....+++++|+|||+||..... ..... .++.|+.|+.+++++|++..++++||++
T Consensus 64 ~~Dl~~-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~ 136 (353)
T PLN02896 64 RADLQE-------EGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFT 136 (353)
T ss_pred ECCCCC-------HHHHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEE
Confidence 999995 333457778999999999986432 23333 3455679999999999887558899999
Q ss_pred ecccccCCCC------CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 161 STAYVAGERT------GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 161 STa~v~~~~~------g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
||+.+|+... ..++|+.. .+.+. . .. .....+.|+.|
T Consensus 137 SS~~vyg~~~~~~~~~~~~~E~~~---~p~~~--~-----------------------------~~---~~~~~~~Y~~s 179 (353)
T PLN02896 137 SSISTLTAKDSNGRWRAVVDETCQ---TPIDH--V-----------------------------WN---TKASGWVYVLS 179 (353)
T ss_pred echhhccccccCCCCCCccCcccC---CcHHH--h-----------------------------hc---cCCCCccHHHH
Confidence 9999997532 11222210 01100 0 00 00123479999
Q ss_pred HHHHHHHHHHh--cCCCcEEEEeccccccCCCCC-CCCccccccchHHHHHHHhcCCCce--eecCC---CceeecchHH
Q 008315 235 KTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEP-FPGWVEDLKTINALFVASAQGNLPC--LVGET---KTIMDVIPVD 306 (570)
Q Consensus 235 K~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p-~~gw~~~~~~~~~~i~~~~~G~~~~--~~~~~---~~~~d~VpVD 306 (570)
|.++|+++..+ ..+++++++||+.|||+...+ ++.++ ..+.....|.... ..+.. ...+|+|+|+
T Consensus 180 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~ 252 (353)
T PLN02896 180 KLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSI-------QVLLSPITGDSKLFSILSAVNSRMGSIALVHIE 252 (353)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchH-------HHHHHHhcCCccccccccccccccCceeEEeHH
Confidence 99999999887 358999999999999987542 12221 1111112332211 11111 1246999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
|+|++++.++... . .+.+|++ ++ .++++.|+++.+.+.++.
T Consensus 253 Dva~a~~~~l~~~---~-~~~~~~~-~~--~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 253 DICDAHIFLMEQT---K-AEGRYIC-CV--DSYDMSELINHLSKEYPC 293 (353)
T ss_pred HHHHHHHHHHhCC---C-cCccEEe-cC--CCCCHHHHHHHHHHhCCC
Confidence 9999999988631 1 1347865 44 689999999999998763
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-25 Score=270.87 Aligned_cols=281 Identities=22% Similarity=0.343 Sum_probs=199.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++|||||||||+|.+|+++|++.+ ..+.+|++++|+.......+|+.+.+.....+ ......+++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~i~~~ 1039 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIW-----------DEEWASRIEVV 1039 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCC-----------chhhhcceEEE
Confidence 4799999999999999999999876 23468999999887766666665322111110 01113579999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.||++++.+|++++.+ +.+.+++|+|||+||.+++..++......|+.||.+++++|.+. ++++|+|+||..+++...
T Consensus 1040 ~gDl~~~~lgl~~~~~-~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~ 1117 (1389)
T TIGR03443 1040 LGDLSKEKFGLSDEKW-SDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEY 1117 (1389)
T ss_pred eccCCCccCCcCHHHH-HHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCccc
Confidence 9999999999987776 47888999999999999988888887789999999999999987 788999999999986421
Q ss_pred C-eeccc-------cCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 171 G-LILEN-------PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 171 g-~i~E~-------~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
. ...+. .+++..+... ....+.+.|+.||+.+|+++
T Consensus 1118 ~~~~~~~~~~~~~~~~~e~~~~~~------------------------------------~~~~~~~~Y~~sK~~aE~l~ 1161 (1389)
T TIGR03443 1118 YVNLSDELVQAGGAGIPESDDLMG------------------------------------SSKGLGTGYGQSKWVAEYII 1161 (1389)
T ss_pred ccchhhhhhhccCCCCCccccccc------------------------------------ccccCCCChHHHHHHHHHHH
Confidence 0 00000 0111100000 01134678999999999999
Q ss_pred HHh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHH-hcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 243 QQS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVAS-AQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 243 ~~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..+ ..+++++|+||+.|+|+...+ .|... .....++.+. ..|. ..+.....|++||||||++++.++....
T Consensus 1162 ~~~~~~g~~~~i~Rpg~v~G~~~~g--~~~~~-~~~~~~~~~~~~~~~----~p~~~~~~~~~~Vddva~ai~~~~~~~~ 1234 (1389)
T TIGR03443 1162 REAGKRGLRGCIVRPGYVTGDSKTG--ATNTD-DFLLRMLKGCIQLGL----IPNINNTVNMVPVDHVARVVVAAALNPP 1234 (1389)
T ss_pred HHHHhCCCCEEEECCCccccCCCcC--CCCch-hHHHHHHHHHHHhCC----cCCCCCccccccHHHHHHHHHHHHhCCc
Confidence 876 458999999999999986532 22211 1111222221 1222 2234557899999999999998875321
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhh
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~ 351 (570)
......+||++++ .+++|.++++.+.+.
T Consensus 1235 -~~~~~~i~~~~~~--~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1235 -KESELAVAHVTGH--PRIRFNDFLGTLKTY 1262 (1389)
T ss_pred -ccCCCCEEEeCCC--CCCcHHHHHHHHHHh
Confidence 1122569999987 789999999998764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=227.78 Aligned_cols=225 Identities=14% Similarity=0.119 Sum_probs=167.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||+|++|+++|++.|++ |.+++|+.... ..+. ..+++++.|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~---V~~l~R~~~~~---~~l~------------------------~~~v~~v~~ 50 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQ---VRCLVRNLRKA---SFLK------------------------EWGAELVYG 50 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCe---EEEEEcChHHh---hhHh------------------------hcCCEEEEC
Confidence 58999999999999999999999964 57889974321 1111 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++ .+....+++++|+|||+++... .......++|+.|+.+++++|++. ++++|||+||..+...
T Consensus 51 Dl~d-------~~~l~~al~g~d~Vi~~~~~~~--~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~---- 116 (317)
T CHL00194 51 DLSL-------PETLPPSFKGVTAIIDASTSRP--SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQY---- 116 (317)
T ss_pred CCCC-------HHHHHHHHCCCCEEEECCCCCC--CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecccccccc----
Confidence 9994 4444578899999999987432 223446788999999999999998 8999999998643210
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
...+|..+|..+|+++.+ .+++++
T Consensus 117 ------------------------------------------------------~~~~~~~~K~~~e~~l~~--~~l~~t 140 (317)
T CHL00194 117 ------------------------------------------------------PYIPLMKLKSDIEQKLKK--SGIPYT 140 (317)
T ss_pred ------------------------------------------------------CCChHHHHHHHHHHHHHH--cCCCeE
Confidence 124578899999999876 689999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
|+||+.+++..- . ........+. +....+++...++|+++|+|+++..++... ...+++||++
T Consensus 141 ilRp~~~~~~~~-------~------~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~---~~~~~~~ni~ 203 (317)
T CHL00194 141 IFRLAGFFQGLI-------S------QYAIPILEKQ-PIWITNESTPISYIDTQDAAKFCLKSLSLP---ETKNKTFPLV 203 (317)
T ss_pred EEeecHHhhhhh-------h------hhhhhhccCC-ceEecCCCCccCccCHHHHHHHHHHHhcCc---cccCcEEEec
Confidence 999998875311 0 0111111222 234455667789999999999999887532 1236899999
Q ss_pred cCCCCcccHHhHHHHHhhhcccCC
Q 008315 333 SSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 333 s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++ +++|+.|+++.+.+..|+.+
T Consensus 204 g~--~~~s~~el~~~~~~~~g~~~ 225 (317)
T CHL00194 204 GP--KSWNSSEIISLCEQLSGQKA 225 (317)
T ss_pred CC--CccCHHHHHHHHHHHhCCCC
Confidence 98 89999999999999998753
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=222.66 Aligned_cols=235 Identities=19% Similarity=0.214 Sum_probs=172.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|||||||||||++|+++|++.|.. .+|+++.|..... ..+. ...+ ..++.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~-~~V~~~~r~~~~~---~~~~-------------~~~~-------~~~~~~ 57 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELKQ---WEMQ-------------QKFP-------APCLRF 57 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCC-cEEEEEcCChhHH---HHHH-------------HHhC-------CCcEEE
Confidence 57899999999999999999999998632 4567777753221 1111 0100 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+++ .+....+++++|+|||+||.... ..+....+++|+.|+.+++++|.+. ++++||++||....
T Consensus 58 v~~Dl~d-------~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 58 FIGDVRD-------KERLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA 129 (324)
T ss_pred EEccCCC-------HHHHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC
Confidence 9999994 44455778899999999997532 2345678999999999999999987 78899999985311
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
.+.++|+.||+.+|+++..+
T Consensus 130 -----------------------------------------------------------~p~~~Y~~sK~~~E~l~~~~~ 150 (324)
T TIGR03589 130 -----------------------------------------------------------NPINLYGATKLASDKLFVAAN 150 (324)
T ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 12467999999999998653
Q ss_pred ----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 246 ----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 246 ----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
..+++++++||+.|+|+... ....+......|......++++..+++++|+|+|++++.++...
T Consensus 151 ~~~~~~gi~~~~lR~g~v~G~~~~----------~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-- 218 (324)
T TIGR03589 151 NISGSKGTRFSVVRYGNVVGSRGS----------VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-- 218 (324)
T ss_pred hhccccCcEEEEEeecceeCCCCC----------cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC--
Confidence 45899999999999996421 12233333444542223346788899999999999999998632
Q ss_pred CCCCCceEEeccCCCCcccHHhHHHHHhhhc
Q 008315 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 322 ~~~~~~iyn~~s~~~~~it~~el~~~~~~~~ 352 (570)
. .+++|+ +++ ...++.|+++.+.+..
T Consensus 219 ~--~~~~~~-~~~--~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 219 L--GGEIFV-PKI--PSMKITDLAEAMAPEC 244 (324)
T ss_pred C--CCCEEc-cCC--CcEEHHHHHHHHHhhC
Confidence 1 257885 554 5799999999998753
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=222.60 Aligned_cols=248 Identities=20% Similarity=0.283 Sum_probs=179.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||+++++.|++.|+ +|+++.|+..... .+. ..+++++.+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~---~~~------------------------~~~~~~~~~ 50 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGE---EVRVLVRPTSDRR---NLE------------------------GLDVEIVEG 50 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCC---EEEEEEecCcccc---ccc------------------------cCCceEEEe
Confidence 4799999999999999999999986 4578888654321 000 136889999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g 171 (570)
|+++ .+..+.+++++|+|||+|+.... .+.....+++|+.|+.+++++|++. ++++||++||.++++....
T Consensus 51 D~~~-------~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~ 122 (328)
T TIGR03466 51 DLRD-------PASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGD 122 (328)
T ss_pred eCCC-------HHHHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCC
Confidence 9994 44456788899999999987542 3456778999999999999999987 7899999999999985211
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCCC
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~l 249 (570)
+.+++|+.+..+. ...+.|+.+|..+|+++.++ ..++
T Consensus 123 ---~~~~~e~~~~~~~--------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~~~ 161 (328)
T TIGR03466 123 ---GTPADETTPSSLD--------------------------------------DMIGHYKRSKFLAEQAALEMAAEKGL 161 (328)
T ss_pred ---CCCcCccCCCCcc--------------------------------------cccChHHHHHHHHHHHHHHHHHhcCC
Confidence 1222222222110 12457999999999999887 3489
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++++||+.+||+..... .....++.....+...... +...++++++|+|++++.++... ..+.+|
T Consensus 162 ~~~ilR~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~----~~~~~~ 227 (328)
T TIGR03466 162 PVVIVNPSTPIGPRDIKP-------TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERG----RIGERY 227 (328)
T ss_pred CEEEEeCCccCCCCCCCC-------CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCC----CCCceE
Confidence 999999999999864210 1112334444444333332 23468999999999999888632 236789
Q ss_pred EeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
|++ + .++++.|+++.+.+.+|+..
T Consensus 228 ~~~-~--~~~s~~e~~~~i~~~~g~~~ 251 (328)
T TIGR03466 228 ILG-G--ENLTLKQILDKLAEITGRPA 251 (328)
T ss_pred Eec-C--CCcCHHHHHHHHHHHhCCCC
Confidence 885 4 68999999999999988653
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=220.19 Aligned_cols=241 Identities=20% Similarity=0.283 Sum_probs=171.0
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
||||||+|.||+.|+++|++.+| ++|+++.|++......++ .+++..+.. .....+.++.||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p--~~lil~d~~E~~l~~l~~------------~l~~~~~~~---~v~~~~~~vigDv 63 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP--KKLILFDRDENKLYELER------------ELRSRFPDP---KVRFEIVPVIGDV 63 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB---SEEEEEES-HHHHHHHHH------------HCHHHC--T---TCEEEEE--CTSC
T ss_pred CEEEccccHHHHHHHHHHHhcCC--CeEEEeCCChhHHHHHHH------------HHhhccccc---CcccccCceeecc
Confidence 79999999999999999999776 789999987544322211 122222210 0111345679999
Q ss_pred CCCCCCCChhhhHHHHhC--CccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 95 SSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
. +.+.++.+++ ++|+|||+||.-+. ..++.+++++|+.||++++++|.+. ++++||.+||..+.
T Consensus 64 r-------d~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv--- 132 (293)
T PF02719_consen 64 R-------DKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAV--- 132 (293)
T ss_dssp C-------HHHHHHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCS---
T ss_pred c-------CHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccC---
Confidence 9 7777788988 89999999998543 3678899999999999999999998 89999999998764
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC--
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE-- 247 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~-- 247 (570)
++.|.|+.||.++|+++..+..
T Consensus 133 --------------------------------------------------------~PtnvmGatKrlaE~l~~~~~~~~ 156 (293)
T PF02719_consen 133 --------------------------------------------------------NPTNVMGATKRLAEKLVQAANQYS 156 (293)
T ss_dssp --------------------------------------------------------S--SHHHHHHHHHHHHHHHHCCTS
T ss_pred --------------------------------------------------------CCCcHHHHHHHHHHHHHHHHhhhC
Confidence 2468999999999999998733
Q ss_pred ---CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 248 ---NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 248 ---~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
+..++++|.|+|.|+...-+|.|. ..+..|.. .-..+++..+-++-+++.++.++.|+....
T Consensus 157 ~~~~t~f~~VRFGNVlgS~GSVip~F~----------~Qi~~g~P-lTvT~p~mtRffmti~EAv~Lvl~a~~~~~---- 221 (293)
T PF02719_consen 157 GNSDTKFSSVRFGNVLGSRGSVIPLFK----------KQIKNGGP-LTVTDPDMTRFFMTIEEAVQLVLQAAALAK---- 221 (293)
T ss_dssp SSS--EEEEEEE-EETTGTTSCHHHHH----------HHHHTTSS-EEECETT-EEEEE-HHHHHHHHHHHHHH------
T ss_pred CCCCcEEEEEEecceecCCCcHHHHHH----------HHHHcCCc-ceeCCCCcEEEEecHHHHHHHHHHHHhhCC----
Confidence 468999999999998775555443 45556643 445678999999999999999999886432
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++|.+--| .|+++.|+++.+.+..|..|
T Consensus 222 ~geifvl~mg--~~v~I~dlA~~~i~~~g~~~ 251 (293)
T PF02719_consen 222 GGEIFVLDMG--EPVKILDLAEAMIELSGLEP 251 (293)
T ss_dssp TTEEEEE-----TCEECCCHHHHHHHHTT-EE
T ss_pred CCcEEEecCC--CCcCHHHHHHHHHhhccccc
Confidence 2789999888 89999999999999988654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.4e-24 Score=218.12 Aligned_cols=261 Identities=21% Similarity=0.288 Sum_probs=180.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||+.|+++|++.|++| +++.|...... +++. .+ . . ..+++.+.+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V---~~~~~~~~~~~--~~~~-~~---------~--------~--~~~~~~~~~D 55 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEV---VVLDNLSNGSP--EALK-RG---------E--------R--ITRVTFVEGD 55 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeE---EEEeCCCccch--hhhh-hh---------c--------c--ccceEEEECC
Confidence 58999999999999999999998754 45544322211 1111 00 0 0 1257888999
Q ss_pred CCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 94 ISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+++ .+..+.+++ ++|+|||+||..... ......++.|+.|+.+++++|.+. ++++||++||.++++.
T Consensus 56 ~~~-------~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 56 LRD-------RELLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGE 127 (328)
T ss_pred CCC-------HHHHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCC
Confidence 995 333345554 699999999976443 234566899999999999999987 7789999999999875
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--K 246 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~ 246 (570)
..+ .+++|+.+. .+.+.|+.+|+.+|+++..+ .
T Consensus 128 ~~~----~~~~e~~~~-----------------------------------------~~~~~y~~sK~~~e~~~~~~~~~ 162 (328)
T TIGR01179 128 PSS----IPISEDSPL-----------------------------------------GPINPYGRSKLMSERILRDLSKA 162 (328)
T ss_pred CCC----CCccccCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHh
Confidence 431 122222221 24578999999999999876 2
Q ss_pred -CCCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCCCc--eee------cCCCceeecchHHHHHHHHHHHH
Q 008315 247 -ENLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGNLP--CLV------GETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 247 -~~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~~~--~~~------~~~~~~~d~VpVDdva~aii~a~ 316 (570)
.+++++|+||+.|||+..++..++... .......+.....|... .+. .+++...++||++|+|+++..++
T Consensus 163 ~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~ 242 (328)
T TIGR01179 163 DPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAAL 242 (328)
T ss_pred ccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHH
Confidence 689999999999999876544333211 11111212222222111 111 35677899999999999999888
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
...... ..+++||++++ .++|+.|+++.+.+.+|+.
T Consensus 243 ~~~~~~-~~~~~~n~~~~--~~~s~~ei~~~~~~~~g~~ 278 (328)
T TIGR01179 243 EYLLNG-GESHVYNLGYG--QGFSVLEVIEAFKKVSGVD 278 (328)
T ss_pred hhhhcC-CCcceEEcCCC--CcccHHHHHHHHHHHhCCC
Confidence 643221 23689999988 8999999999999998865
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-24 Score=227.89 Aligned_cols=238 Identities=16% Similarity=0.187 Sum_probs=174.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++|||||||||||+++++.|+++|++ |++++|+..+........ ++. . ...++++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~---V~~l~R~~~~~~~~~~~~-~~~---------~---------~~~~v~~ 115 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN---VVAVAREKSGIRGKNGKE-DTK---------K---------ELPGAEV 115 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEEechhhccccchhh-HHh---------h---------hcCCceE
Confidence 35789999999999999999999999864 578899764322110000 000 0 0246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC----CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN----ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~----~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
+.+|+++ .+..+.+++ ++|+||||+|.... .....+++|+.++.+++++|++. ++++||++||.++
T Consensus 116 v~~Dl~d-------~~~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v 185 (390)
T PLN02657 116 VFGDVTD-------ADSLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICV 185 (390)
T ss_pred EEeeCCC-------HHHHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccc
Confidence 9999995 343446665 59999999986321 12345788999999999999987 8899999999876
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+.. .+.|..+|..+|+.+...
T Consensus 186 ~~p-----------------------------------------------------------~~~~~~sK~~~E~~l~~~ 206 (390)
T PLN02657 186 QKP-----------------------------------------------------------LLEFQRAKLKFEAELQAL 206 (390)
T ss_pred cCc-----------------------------------------------------------chHHHHHHHHHHHHHHhc
Confidence 421 235788999999988764
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCce-eecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI-MDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~-~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++|+||+.+|+... +.+..+..|....+.++++.. .++|+++|+|.+++.++... ..
T Consensus 207 ~~gl~~tIlRp~~~~~~~~--------------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~---~~ 269 (390)
T PLN02657 207 DSDFTYSIVRPTAFFKSLG--------------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE---SK 269 (390)
T ss_pred cCCCCEEEEccHHHhcccH--------------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc---cc
Confidence 5789999999999997421 123333455555567887764 46899999999999888632 12
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ ...+|+.|+++.+.+.+|+.+
T Consensus 270 ~~~~~~Iggp-~~~~S~~Eia~~l~~~lG~~~ 300 (390)
T PLN02657 270 INKVLPIGGP-GKALTPLEQGEMLFRILGKEP 300 (390)
T ss_pred cCCEEEcCCC-CcccCHHHHHHHHHHHhCCCC
Confidence 3689999874 158999999999999998764
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-24 Score=218.37 Aligned_cols=230 Identities=21% Similarity=0.241 Sum_probs=157.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|++.|.++|.+| +.+.|+ ..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v---~~~~r~------------------------------------------~~ 35 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEV---IATSRS------------------------------------------DL 35 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEE---EEESTT------------------------------------------CS
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEE---EEeCch------------------------------------------hc
Confidence 689999999999999999999877443 333332 34
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|++ +.+....+++ ++|+||||||....+ .+.+.++.+|+.++.+++++|.+. + .++||+||.+|++
T Consensus 36 dl~-------d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFd 106 (286)
T PF04321_consen 36 DLT-------DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFD 106 (286)
T ss_dssp -TT-------SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-
T ss_pred CCC-------CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEc
Confidence 555 3433445544 589999999987654 467889999999999999999987 4 5899999999997
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
... ..+|.|+++. .+.|.|+.||+.+|+.+.+..+
T Consensus 107 G~~----~~~y~E~d~~-----------------------------------------~P~~~YG~~K~~~E~~v~~~~~ 141 (286)
T PF04321_consen 107 GDK----GGPYTEDDPP-----------------------------------------NPLNVYGRSKLEGEQAVRAACP 141 (286)
T ss_dssp SST----SSSB-TTS---------------------------------------------SSHHHHHHHHHHHHHHHH-S
T ss_pred CCc----ccccccCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhcC
Confidence 653 2345544433 3568999999999999998544
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
...|+|++.+||.... +....++..+..|.. +....+.....++++|+|.+++.++...........
T Consensus 142 --~~~IlR~~~~~g~~~~---------~~~~~~~~~~~~~~~--i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~G 208 (286)
T PF04321_consen 142 --NALILRTSWVYGPSGR---------NFLRWLLRRLRQGEP--IKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWG 208 (286)
T ss_dssp --SEEEEEE-SEESSSSS---------SHHHHHHHHHHCTSE--EEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-E
T ss_pred --CEEEEecceecccCCC---------chhhhHHHHHhcCCe--eEeeCCceeCCEEHHHHHHHHHHHHHhcccccccce
Confidence 7999999999998332 222244445555553 334457789999999999999999986653222358
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||++++ +.+|+.|+++.+.+.++..+
T Consensus 209 iyh~~~~--~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 209 IYHLSGP--ERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp EEE---B--S-EEHHHHHHHHHHHHTHCT
T ss_pred eEEEecC--cccCHHHHHHHHHHHhCCCC
Confidence 9999998 89999999999999999876
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-23 Score=213.05 Aligned_cols=222 Identities=13% Similarity=0.101 Sum_probs=151.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|+++|++| .+..
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V---~~~~--------------------------------------------- 40 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDF---HYGS--------------------------------------------- 40 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEE---EEec---------------------------------------------
Confidence 4799999999999999999999998765 1111
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc------ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF------DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
+|+. +.+.....++ ++|+|||+||.+.. .++....+++|+.||.+++++|++. +++ ++++||.
T Consensus 41 ~~~~-------~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~ 111 (298)
T PLN02778 41 GRLE-------NRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATG 111 (298)
T ss_pred CccC-------CHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecc
Confidence 1122 1111112222 68999999998642 2456778999999999999999997 775 6777877
Q ss_pred cccCCCCC-ee-ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 164 YVAGERTG-LI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 164 ~v~~~~~g-~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
++++.... .. +..+++|+++.. .+.+.|+.||.++|++
T Consensus 112 ~vy~~~~~~p~~~~~~~~Ee~~p~----------------------------------------~~~s~Yg~sK~~~E~~ 151 (298)
T PLN02778 112 CIFEYDDAHPLGSGIGFKEEDTPN----------------------------------------FTGSFYSKTKAMVEEL 151 (298)
T ss_pred eEeCCCCCCCcccCCCCCcCCCCC----------------------------------------CCCCchHHHHHHHHHH
Confidence 77764321 00 011232222110 1237899999999999
Q ss_pred HHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 242 MQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 242 v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+..+. +..++|++++++.... ....++..+..+......+ .++++++|++++++.++..
T Consensus 152 ~~~y~---~~~~lr~~~~~~~~~~----------~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~--- 210 (298)
T PLN02778 152 LKNYE---NVCTLRVRMPISSDLS----------NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKR--- 210 (298)
T ss_pred HHHhh---ccEEeeecccCCcccc----------cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhC---
Confidence 98864 4678999887764210 1123455555553322222 2799999999999988752
Q ss_pred CCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 322 ~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.. .++||++++ .++|+.|+++.+.+.++..
T Consensus 211 ~~--~g~yNigs~--~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 211 NL--TGIYNFTNP--GVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred CC--CCeEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 11 359999988 7999999999999998853
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-24 Score=208.12 Aligned_cols=266 Identities=21% Similarity=0.240 Sum_probs=198.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||+||||++.+-+|++.|++|.-|--|.|+- .....|++ +..++ ..+|.+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~-------------~l~~~------~~~v~f~~ 60 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVR-------------QLLGE------GKSVFFVE 60 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHH-------------HhcCC------CCceEEEE
Confidence 68999999999999999999999999986555555543 23334443 22221 37899999
Q ss_pred ccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 92 GDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+|++ |...++++++. .|.|+|.||..... +.+...+..|+.||.++|+.+++. +++.+|+.||+.+|
T Consensus 61 ~Dl~-------D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvY 132 (343)
T KOG1371|consen 61 GDLN-------DAEALEKLFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVY 132 (343)
T ss_pred eccC-------CHHHHHHHHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeee
Confidence 9999 66667788874 89999999986543 344566899999999999999998 69999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
|... +-|++|..+.+ .+.|+|+.||..+|.++..+
T Consensus 133 G~p~----~ip~te~~~t~----------------------------------------~p~~pyg~tK~~iE~i~~d~~ 168 (343)
T KOG1371|consen 133 GLPT----KVPITEEDPTD----------------------------------------QPTNPYGKTKKAIEEIIHDYN 168 (343)
T ss_pred cCcc----eeeccCcCCCC----------------------------------------CCCCcchhhhHHHHHHHHhhh
Confidence 9864 45666555543 35789999999999999987
Q ss_pred -cCCCcEEEEeccccccC--CC---CCCCCccccccchHHHHHHHhcCCCce--------eecCCCceeecchHHHHHHH
Q 008315 246 -KENLSLVIIRPTIVSGT--YK---EPFPGWVEDLKTINALFVASAQGNLPC--------LVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~--~~---~p~~gw~~~~~~~~~~i~~~~~G~~~~--------~~~~~~~~~d~VpVDdva~a 311 (570)
..++.++++|-..++|. +. ++..|...++- +.+...+.|..+. ...+++.++|.++|-|.|+.
T Consensus 169 ~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~---p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~ 245 (343)
T KOG1371|consen 169 KAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLL---PYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADG 245 (343)
T ss_pred ccccceEEEEEeccccCccccCccCCCCccCccccc---ccccchhhcccccceeecCcccccCCCeeecceeeEehHHH
Confidence 44588999999999993 32 22233322221 1222333333221 22456899999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+.|+....... ...|||++++ .+.+..++...+.+..|..-
T Consensus 246 h~~al~k~~~~~-~~~i~Nlgtg--~g~~V~~lv~a~~k~~g~~~ 287 (343)
T KOG1371|consen 246 HVAALGKLRGAA-EFGVYNLGTG--KGSSVLELVTAFEKALGVKI 287 (343)
T ss_pred HHHHhhccccch-heeeEeecCC--CCccHHHHHHHHHHHhcCCC
Confidence 999998654322 2459999999 88999999999999988764
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=201.27 Aligned_cols=225 Identities=21% Similarity=0.261 Sum_probs=169.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||++|.+|..|.+.|. .+.+ |+.+.|+ ..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~---v~a~~~~------------------------------------------~~ 34 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFE---VIATDRA------------------------------------------EL 34 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCce---EEeccCc------------------------------------------cc
Confidence 359999999999999999887 3333 3444332 15
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+...+++. ++|+|||+||.+..+ ...+.++.+|..|+.++.++|.+. + -.+||+||.||+.
T Consensus 35 Ditd-------~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-g-a~lVhiSTDyVFD 105 (281)
T COG1091 35 DITD-------PDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-G-ARLVHISTDYVFD 105 (281)
T ss_pred cccC-------hHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-C-CeEEEeecceEec
Confidence 7774 443446655 479999999998776 346889999999999999999998 4 4799999999997
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
..+ ..+|.|+++. ++.|-|+.||.++|..+.++.
T Consensus 106 G~~----~~~Y~E~D~~-----------------------------------------~P~nvYG~sKl~GE~~v~~~~- 139 (281)
T COG1091 106 GEK----GGPYKETDTP-----------------------------------------NPLNVYGRSKLAGEEAVRAAG- 139 (281)
T ss_pred CCC----CCCCCCCCCC-----------------------------------------CChhhhhHHHHHHHHHHHHhC-
Confidence 654 2456555544 356899999999999999854
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
-...|+|.|+|||.....+ +..++.....|. .+.+-.++....+++.|+|.++..++.... .+.
T Consensus 140 -~~~~I~Rtswv~g~~g~nF---------v~tml~la~~~~--~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~----~~~ 203 (281)
T COG1091 140 -PRHLILRTSWVYGEYGNNF---------VKTMLRLAKEGK--ELKVVDDQYGSPTYTEDLADAILELLEKEK----EGG 203 (281)
T ss_pred -CCEEEEEeeeeecCCCCCH---------HHHHHHHhhcCC--ceEEECCeeeCCccHHHHHHHHHHHHhccc----cCc
Confidence 3689999999999865211 112333333443 344456788999999999999999886322 244
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||++++ ..+||.|+++.+.+.++...
T Consensus 204 ~yH~~~~--g~~Swydfa~~I~~~~~~~~ 230 (281)
T COG1091 204 VYHLVNS--GECSWYEFAKAIFEEAGVDG 230 (281)
T ss_pred EEEEeCC--CcccHHHHHHHHHHHhCCCc
Confidence 9999998 77999999999999987543
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=205.28 Aligned_cols=236 Identities=16% Similarity=0.143 Sum_probs=160.0
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|||||||||||+++++.|+++|+ +|++++|+....... . ...+. |+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~---~------------------------~~~~~----~~ 46 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGH---EVTILTRSPPAGANT---K------------------------WEGYK----PW 46 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCC---EEEEEeCCCCCCCcc---c------------------------ceeee----cc
Confidence 69999999999999999999985 468999976543110 0 00111 11
Q ss_pred CCCCCCCChhhhHHHHhCCccEEEEcCccCCccc-----CHHHHHHHHHHHHHHHHHHHHHccCc--eEEEEEecccccC
Q 008315 95 SSEDLGLKDSNLKEELWNELDVMVNSAAITKFDE-----RYDVAFGINTLGAIHLVNFAKKCVKL--KVFVHVSTAYVAG 167 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~l--k~fV~vSTa~v~~ 167 (570)
. .... ...+.++|+|||+||...... ......++|+.|+.+++++|++. ++ ..||+.||.++|+
T Consensus 47 ~-------~~~~-~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 47 A-------PLAE-SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYG 117 (292)
T ss_pred c-------ccch-hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeC
Confidence 1 1111 245578999999999765422 23456789999999999999987 54 4688888888888
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-c
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-K 246 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~ 246 (570)
...+ .+++|+.+. ...+.|...+...|..+... .
T Consensus 118 ~~~~----~~~~E~~~~-----------------------------------------~~~~~~~~~~~~~e~~~~~~~~ 152 (292)
T TIGR01777 118 TSED----RVFTEEDSP-----------------------------------------AGDDFLAELCRDWEEAAQAAED 152 (292)
T ss_pred CCCC----CCcCcccCC-----------------------------------------CCCChHHHHHHHHHHHhhhchh
Confidence 6431 223222211 11234556666677766544 3
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++|+||+.|||+.. ++.. .++.....+. ....++++...++|+|+|+|+++..++... ...
T Consensus 153 ~~~~~~ilR~~~v~G~~~----~~~~------~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~----~~~ 217 (292)
T TIGR01777 153 LGTRVVLLRTGIVLGPKG----GALA------KMLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENA----SIS 217 (292)
T ss_pred cCCceEEEeeeeEECCCc----chhH------HHHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCc----ccC
Confidence 579999999999999742 2211 1111111111 122477889999999999999999988532 124
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.+||++++ .++|+.|+++.+.+.++..
T Consensus 218 g~~~~~~~--~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 218 GPVNATAP--EPVRNKEFAKALARALHRP 244 (292)
T ss_pred CceEecCC--CccCHHHHHHHHHHHhCCC
Confidence 68999998 8999999999999998863
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=213.74 Aligned_cols=238 Identities=16% Similarity=0.178 Sum_probs=169.1
Q ss_pred CCEEEEE----CCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 12 NKIILVS----GVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlIT----GaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|||| |||||||++|++.|++.|++ |++++|+...... +. ..-|..+. .+...++
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~---V~~l~R~~~~~~~-------~~-~~~~~~~~--------~l~~~~v 112 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHE---VTLFTRGKEPSQK-------MK-KEPFSRFS--------ELSSAGV 112 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCE---EEEEecCCcchhh-------hc-cCchhhhh--------HhhhcCc
Confidence 4789999 99999999999999999965 5789997643210 00 00011110 0001358
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW--NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
+++.||+. + . +.++ .++|+|||+++. +..++.+++++|++. ++++|||+||+++
T Consensus 113 ~~v~~D~~-------d--~-~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~v 168 (378)
T PLN00016 113 KTVWGDPA-------D--V-KSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKSP-GLKQFLFCSSAGV 168 (378)
T ss_pred eEEEecHH-------H--H-HhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHHc-CCCEEEEEccHhh
Confidence 89999987 3 1 1222 479999999763 245788999999987 8999999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
|+...+ .++.|..+ .+++. +|..+|.++.+
T Consensus 169 yg~~~~----~p~~E~~~--------------------------------------------~~p~~-sK~~~E~~l~~- 198 (378)
T PLN00016 169 YKKSDE----PPHVEGDA--------------------------------------------VKPKA-GHLEVEAYLQK- 198 (378)
T ss_pred cCCCCC----CCCCCCCc--------------------------------------------CCCcc-hHHHHHHHHHH-
Confidence 986431 12222111 11222 89999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
.+++++|+||+.+||+.... .....++..+..|..-.++++++...++++++|+|++++.++... ...
T Consensus 199 -~~l~~~ilRp~~vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~---~~~ 266 (378)
T PLN00016 199 -LGVNWTSFRPQYIYGPGNNK--------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNP---KAA 266 (378)
T ss_pred -cCCCeEEEeceeEECCCCCC--------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCc---ccc
Confidence 68999999999999986421 111223444555655456788889999999999999999988632 123
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 267 ~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 267 GQIFNIVSD--RAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred CCEEEecCC--CccCHHHHHHHHHHHhCCCC
Confidence 589999998 89999999999999988754
|
|
| >PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.2e-24 Score=178.29 Aligned_cols=93 Identities=29% Similarity=0.466 Sum_probs=85.8
Q ss_pred HHHhhHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHhhccCCCCCccccccCCCCC
Q 008315 386 CYLLPLKGLQLANTVFHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSI 465 (570)
Q Consensus 386 ~~~lPa~~ld~~~~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~F~~~~w~Fd~~n~~~L~~~ls~~Dr~~~~F~fD~~~i 465 (570)
.|.+||+++|+++.+.|++ |++.++++|+ .++.++++||++++|.|+|+|+.+|++.|+++|++ +|+||+++|
T Consensus 2 ~h~lPA~~~D~~~~l~g~k--p~~~k~~~ki---~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~--~F~fD~~~i 74 (94)
T PF03015_consen 2 FHFLPAYLLDLILRLFGQK--PRMVKIYRKI---RKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDRE--IFNFDIRSI 74 (94)
T ss_pred cchHHHHHHHHHHHHhCCC--hHHHHHHHHH---HHHHHHHHHHHhCceeecchHHHHHHHhCchhcCc--eecCCCCCC
Confidence 4789999999999998774 8999887776 56678888999999999999999999999999988 999999999
Q ss_pred CHHHHHhhcchhhHHHHhhcC
Q 008315 466 EWRDYFMNTHIPGVENILQQK 486 (570)
Q Consensus 466 dW~~Y~~~~~i~Girkyllke 486 (570)
||++|+.++ ++|+|||++||
T Consensus 75 dW~~Y~~~~-~~G~rkyllke 94 (94)
T PF03015_consen 75 DWEEYFRNY-IPGIRKYLLKE 94 (94)
T ss_pred CHHHHHHHH-HHHHHHHHhCC
Confidence 999999994 99999999997
|
The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.7e-21 Score=184.63 Aligned_cols=234 Identities=16% Similarity=0.205 Sum_probs=164.4
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|||||||||++|+..|.+.|++ |++|+|+....+.. + ...+..+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~---v~iltR~~~~~~~~--~-------------------------~~~v~~~---- 46 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQ---VTILTRRPPKASQN--L-------------------------HPNVTLW---- 46 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCe---EEEEEcCCcchhhh--c-------------------------Ccccccc----
Confidence 689999999999999999999865 58999987654210 0 0111111
Q ss_pred CCCCCCCChhhhHHHHhC-CccEEEEcCccCCcc----cCH-HHHHHHHHHHHHHHHHHHHHc-cCceEEEEEecccccC
Q 008315 95 SSEDLGLKDSNLKEELWN-ELDVMVNSAAITKFD----ERY-DVAFGINTLGAIHLVNFAKKC-VKLKVFVHVSTAYVAG 167 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~-~vdiVih~Aa~v~f~----~~~-~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~ 167 (570)
+.. ....+ ++|+|||+||..-++ +.. +...+.-+..|..|+++..++ .+.+.||--|....||
T Consensus 47 ---------~~~-~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 47 ---------EGL-ADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred ---------chh-hhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 111 12223 799999999975443 333 345688899999999998865 3677899999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-c
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-K 246 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~ 246 (570)
+.. |+.++|+++..-+-..++|.+ | |....+. .
T Consensus 117 ~~~----~~~~tE~~~~g~~Fla~lc~~-------------------------------W-----------E~~a~~a~~ 150 (297)
T COG1090 117 HSG----DRVVTEESPPGDDFLAQLCQD-------------------------------W-----------EEEALQAQQ 150 (297)
T ss_pred CCC----ceeeecCCCCCCChHHHHHHH-------------------------------H-----------HHHHhhhhh
Confidence 764 566666555554444444431 2 4444444 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+..++++|.|+|.|+...-++ .++-.+..|. .--.|++.+..+|||+||+++++..++.+..- .
T Consensus 151 ~gtRvvllRtGvVLs~~GGaL~----------~m~~~fk~gl-GG~~GsGrQ~~SWIhieD~v~~I~fll~~~~l----s 215 (297)
T COG1090 151 LGTRVVLLRTGVVLSPDGGALG----------KMLPLFKLGL-GGKLGSGRQWFSWIHIEDLVNAILFLLENEQL----S 215 (297)
T ss_pred cCceEEEEEEEEEecCCCcchh----------hhcchhhhcc-CCccCCCCceeeeeeHHHHHHHHHHHHhCcCC----C
Confidence 5889999999999997542221 1221222221 12348999999999999999999999974332 3
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
..||++++ +|++..++.+.+.+.++++
T Consensus 216 Gp~N~taP--~PV~~~~F~~al~r~l~RP 242 (297)
T COG1090 216 GPFNLTAP--NPVRNKEFAHALGRALHRP 242 (297)
T ss_pred CcccccCC--CcCcHHHHHHHHHHHhCCC
Confidence 57999999 9999999999999998875
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-20 Score=209.86 Aligned_cols=201 Identities=16% Similarity=0.176 Sum_probs=150.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++++++|++.|++ |+++.|+.... + ..++.++.+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~---Vv~l~R~~~~~-----~-------------------------~~~v~~v~g 47 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHE---VVGIARHRPDS-----W-------------------------PSSADFIAA 47 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCchhh-----c-------------------------ccCceEEEe
Confidence 57999999999999999999999965 46778753210 0 135788999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++ .+....+++++|+|||+|+.... ..++|+.||.+++++|++. ++++||++||..
T Consensus 48 DL~D-------~~~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~-------- 105 (854)
T PRK05865 48 DIRD-------ATAVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAET-GTGRIVFTSSGH-------- 105 (854)
T ss_pred eCCC-------HHHHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH--------
Confidence 9994 44445778899999999986431 4689999999999999987 789999999742
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
|..+|+++.+ .+++++
T Consensus 106 --------------------------------------------------------------K~aaE~ll~~--~gl~~v 121 (854)
T PRK05865 106 --------------------------------------------------------------QPRVEQMLAD--CGLEWV 121 (854)
T ss_pred --------------------------------------------------------------HHHHHHHHHH--cCCCEE
Confidence 4556777765 589999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
|+||++|||+.. +.| +.... +......++++...|+|||+|+|++++.++... ...+.+||++
T Consensus 122 ILRp~~VYGP~~---~~~----------i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~---~~~ggvyNIg 184 (854)
T PRK05865 122 AVRCALIFGRNV---DNW----------VQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT---VIDSGPVNLA 184 (854)
T ss_pred EEEeceEeCCCh---HHH----------HHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCC---CcCCCeEEEE
Confidence 999999999742 112 21111 111112245566789999999999999887522 1125699999
Q ss_pred cCCCCcccHHhHHHHHhhh
Q 008315 333 SSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 333 s~~~~~it~~el~~~~~~~ 351 (570)
++ +++|+.|+++.+.+.
T Consensus 185 sg--~~~Si~EIae~l~~~ 201 (854)
T PRK05865 185 AP--GELTFRRIAAALGRP 201 (854)
T ss_pred CC--CcccHHHHHHHHhhh
Confidence 98 889999999988764
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=205.16 Aligned_cols=221 Identities=13% Similarity=0.095 Sum_probs=149.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..|+|||||||||||++|++.|.+.|++|. +.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~------------------------------------------------~~ 410 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYE------------------------------------------------YG 410 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEE------------------------------------------------ee
Confidence 457899999999999999999998876541 11
Q ss_pred EccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 91 AGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITK---FD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~---f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
.+|+++ .+.....++ ++|+||||||.+. .+ ++...++++|+.||.+++++|++. +++ +||+||
T Consensus 411 ~~~l~d-------~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~~-~v~~Ss 481 (668)
T PLN02260 411 KGRLED-------RSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-GLL-MMNFAT 481 (668)
T ss_pred cccccc-------HHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CCe-EEEEcc
Confidence 234442 222234433 6999999999763 22 356788999999999999999998 775 788899
Q ss_pred ccccCCCCCe--eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 163 AYVAGERTGL--ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 163 a~v~~~~~g~--i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
.++++..... -.+.++.|+++.. ...+.|+.||.++|+
T Consensus 482 ~~v~~~~~~~~~~~~~p~~E~~~~~----------------------------------------~~~~~Yg~sK~~~E~ 521 (668)
T PLN02260 482 GCIFEYDAKHPEGSGIGFKEEDKPN----------------------------------------FTGSFYSKTKAMVEE 521 (668)
T ss_pred cceecCCcccccccCCCCCcCCCCC----------------------------------------CCCChhhHHHHHHHH
Confidence 9888642100 0012343322210 123889999999999
Q ss_pred HHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 241 IMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 241 ~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
++..+. ...++|++++|+.... + ...++..+.++.. .+.. + .+...+|+++.+++.++..
T Consensus 522 ~~~~~~---~~~~~r~~~~~~~~~~---~-------~~nfv~~~~~~~~-~~~v-p---~~~~~~~~~~~~~~~l~~~-- 581 (668)
T PLN02260 522 LLREYD---NVCTLRVRMPISSDLS---N-------PRNFITKISRYNK-VVNI-P---NSMTVLDELLPISIEMAKR-- 581 (668)
T ss_pred HHHhhh---hheEEEEEEecccCCC---C-------ccHHHHHHhccce-eecc-C---CCceehhhHHHHHHHHHHh--
Confidence 998863 5788899988874321 1 1133333333222 1111 1 2457778888887777642
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
. .+.+||++++ .++||.|+++.+.+..+
T Consensus 582 -~--~~giyni~~~--~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 582 -N--LRGIWNFTNP--GVVSHNEILEMYKDYID 609 (668)
T ss_pred -C--CCceEEecCC--CcCcHHHHHHHHHHhcC
Confidence 1 1579999998 79999999999988764
|
|
| >cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-21 Score=160.36 Aligned_cols=91 Identities=32% Similarity=0.451 Sum_probs=82.8
Q ss_pred HHHhhHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHhccccccceEEEechhHHHHHhhccCCCCCccccccCCCCC
Q 008315 386 CYLLPLKGLQLANTVFHNFFKGVYNDLRKKVKFVMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSI 465 (570)
Q Consensus 386 ~~~lPa~~ld~~~~~~g~~~~~~~~kl~rk~~~~~~~~~~~~~F~~~~w~Fd~~n~~~L~~~ls~~Dr~~~~F~fD~~~i 465 (570)
.|.+||+++|.+..+.|+ +|.+.++++++ .++.+++++|++++|.|+++|+++|++.|+++||+ +|+||+++|
T Consensus 2 ~~~lpa~~~d~~~~l~g~--~~~~~~~~~k~---~~~~~~~~~Ft~~~w~F~~~n~~~L~~~l~~~Dr~--~F~fD~~~i 74 (92)
T cd09071 2 LHLLPAYLLDLLLRLLGR--KPRLLKLYRKI---HKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRE--LFNFDIRSI 74 (92)
T ss_pred cccchHHHHHHHHHHhCC--ChHHHHHHHHH---HHHHHHhhccccCeEEeeCcHHHHHHHHCCHHHHH--hCCCCCCCC
Confidence 367999999999999866 48888887776 57788899999999999999999999999999988 999999999
Q ss_pred CHHHHHhhcchhhHHHHhh
Q 008315 466 EWRDYFMNTHIPGVENILQ 484 (570)
Q Consensus 466 dW~~Y~~~~~i~Girkyll 484 (570)
||++|+.++ ++|+|+|++
T Consensus 75 dW~~Y~~~~-~~G~r~yll 92 (92)
T cd09071 75 DWDDYFENY-IPGLRKYLL 92 (92)
T ss_pred CHHHHHHHH-HHHHHHHhC
Confidence 999999995 999999985
|
C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=193.72 Aligned_cols=202 Identities=17% Similarity=0.254 Sum_probs=142.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|++ |.++.|..... ...+++++.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~---Vi~ldr~~~~~------------------------------~~~~ve~v~~ 47 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHT---VSGIAQHPHDA------------------------------LDPRVDYVCA 47 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE---EEEEeCChhhc------------------------------ccCCceEEEc
Confidence 47999999999999999999999965 46777743210 0145789999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++ ... ..++.++|+|||+|+.... . ...+|+.|+.+++++|++. ++ ++||+||++ |...
T Consensus 48 Dl~d-------~~l-~~al~~~D~VIHLAa~~~~-~----~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~~--G~~~-- 108 (699)
T PRK12320 48 SLRN-------PVL-QELAGEADAVIHLAPVDTS-A----PGGVGITGLAHVANAAARA-GA-RLLFVSQAA--GRPE-- 108 (699)
T ss_pred cCCC-------HHH-HHHhcCCCEEEEcCccCcc-c----hhhHHHHHHHHHHHHHHHc-CC-eEEEEECCC--CCCc--
Confidence 9994 333 4667889999999986421 1 2358999999999999997 66 699999874 3210
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
.|. .+|.++.. .++|++
T Consensus 109 ---------------------------------------------------------~~~----~aE~ll~~--~~~p~~ 125 (699)
T PRK12320 109 ---------------------------------------------------------LYR----QAETLVST--GWAPSL 125 (699)
T ss_pred ---------------------------------------------------------ccc----HHHHHHHh--cCCCEE
Confidence 011 35666655 458999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
|+|+++|||+...+ .. .+-+..++..... .....+|||||++++++.++.. .. ..+||++
T Consensus 126 ILR~~nVYGp~~~~----~~-~r~I~~~l~~~~~----------~~pI~vIyVdDvv~alv~al~~----~~-~GiyNIG 185 (699)
T PRK12320 126 VIRIAPPVGRQLDW----MV-CRTVATLLRSKVS----------ARPIRVLHLDDLVRFLVLALNT----DR-NGVVDLA 185 (699)
T ss_pred EEeCceecCCCCcc----cH-hHHHHHHHHHHHc----------CCceEEEEHHHHHHHHHHHHhC----CC-CCEEEEe
Confidence 99999999974321 11 0111222221111 2234469999999999988852 11 3499999
Q ss_pred cCCCCcccHHhHHHHHhhh
Q 008315 333 SSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 333 s~~~~~it~~el~~~~~~~ 351 (570)
++ +.+|+.|+++.+...
T Consensus 186 ~~--~~~Si~el~~~i~~~ 202 (699)
T PRK12320 186 TP--DTTNVVTAWRLLRSV 202 (699)
T ss_pred CC--CeeEHHHHHHHHHHh
Confidence 99 899999999888665
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=164.82 Aligned_cols=182 Identities=22% Similarity=0.319 Sum_probs=140.3
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|+||||++|+.++++|+++| .+|++++|++.+... ..+++++.+|+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~---~~V~~~~R~~~~~~~-----------------------------~~~~~~~~~d~ 48 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG---HEVTALVRSPSKAED-----------------------------SPGVEIIQGDL 48 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGHHH-----------------------------CTTEEEEESCT
T ss_pred eEEECCCChHHHHHHHHHHHCC---CEEEEEecCchhccc-----------------------------ccccccceeee
Confidence 7999999999999999999999 466899998653211 26899999999
Q ss_pred CCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCeec
Q 008315 95 SSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~i~ 174 (570)
.+ .+.....++++|+|||+++.... +...+++++++|++. +++++|++||+.++....+...
T Consensus 49 ~d-------~~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~ 110 (183)
T PF13460_consen 49 FD-------PDSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFS 110 (183)
T ss_dssp TC-------HHHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEE
T ss_pred hh-------hhhhhhhhhhcchhhhhhhhhcc----------ccccccccccccccc-ccccceeeeccccCCCCCcccc
Confidence 94 44456888899999999986543 178899999999998 8999999999999886542110
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEEEE
Q 008315 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLVII 254 (570)
Q Consensus 175 E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~Iv 254 (570)
... .+.+..|...|..+|+.+.+ .+++++++
T Consensus 111 ~~~-----------------------------------------------~~~~~~~~~~~~~~e~~~~~--~~~~~~iv 141 (183)
T PF13460_consen 111 DED-----------------------------------------------KPIFPEYARDKREAEEALRE--SGLNWTIV 141 (183)
T ss_dssp GGT-----------------------------------------------CGGGHHHHHHHHHHHHHHHH--STSEEEEE
T ss_pred ccc-----------------------------------------------ccchhhhHHHHHHHHHHHHh--cCCCEEEE
Confidence 000 01235788999999999986 69999999
Q ss_pred eccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 255 RPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 255 RPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
||+.++|....+. . .....+....+.|+++|+|.+++.++.
T Consensus 142 rp~~~~~~~~~~~-~---------------------~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 142 RPGWIYGNPSRSY-R---------------------LIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp EESEEEBTTSSSE-E---------------------EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred ECcEeEeCCCcce-e---------------------EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 9999999864311 0 111134455689999999999999875
|
... |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-19 Score=171.59 Aligned_cols=239 Identities=19% Similarity=0.260 Sum_probs=174.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|-.+-|.|||||+|..++.+|-+.|. +|++--|..+..-. +++ + .+ -..++-+
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GS---QviiPyR~d~~~~r--~lk-------v-------mG------dLGQvl~ 113 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGS---QVIIPYRGDEYDPR--HLK-------V-------MG------DLGQVLF 113 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCC---eEEEeccCCccchh--hee-------e-------cc------cccceee
Confidence 5677888999999999999999999995 44565564332211 111 0 01 1356778
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
..-|+. |++....+.+..++|||+.|.- +...--...++|+.+++++.+.|+++ ++.+|||+|...++-
T Consensus 114 ~~fd~~-------DedSIr~vvk~sNVVINLIGrd-~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lganv-- 182 (391)
T KOG2865|consen 114 MKFDLR-------DEDSIRAVVKHSNVVINLIGRD-YETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGANV-- 182 (391)
T ss_pred eccCCC-------CHHHHHHHHHhCcEEEEeeccc-cccCCcccccccchHHHHHHHHHHhh-Chhheeehhhccccc--
Confidence 888888 6777778999999999999862 22222234689999999999999999 999999999887441
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
..++-|-.+|+++|..++++.+
T Consensus 183 --------------------------------------------------------~s~Sr~LrsK~~gE~aVrdafP-- 204 (391)
T KOG2865|consen 183 --------------------------------------------------------KSPSRMLRSKAAGEEAVRDAFP-- 204 (391)
T ss_pred --------------------------------------------------------cChHHHHHhhhhhHHHHHhhCC--
Confidence 1246688999999999998655
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
..+|+||+-|||..+..+.-|.. +..- .|-++.....-+..-..|+|-|||.+|+.|+.++. ..|++|
T Consensus 205 eAtIirPa~iyG~eDrfln~ya~--------~~rk-~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~---s~Gkty 272 (391)
T KOG2865|consen 205 EATIIRPADIYGTEDRFLNYYAS--------FWRK-FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD---SMGKTY 272 (391)
T ss_pred cceeechhhhcccchhHHHHHHH--------HHHh-cCceeeecCCcceeeccEEEehHHHHHHHhccCcc---ccCcee
Confidence 48999999999986533222211 1110 23333332333577889999999999999997553 348899
Q ss_pred EeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
..+++ ...+..|+++++.+...+-|
T Consensus 273 e~vGP--~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 273 EFVGP--DRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred eecCC--chhhHHHHHHHHHHHHhhcc
Confidence 99999 88999999999988877654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=172.54 Aligned_cols=235 Identities=18% Similarity=0.284 Sum_probs=156.0
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
--++++|+||||||++|+.+++.|++.|++ |++++|+.... . ... + . ..+++
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~---V~~~~R~~~~~------~-~~~------------~----~--~~~~~ 65 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFA---VKAGVRDVDKA------K-TSL------------P----Q--DPSLQ 65 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCE---EEEEecCHHHH------H-Hhc------------c----c--CCceE
Confidence 346789999999999999999999998864 57888875321 1 000 0 0 13688
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
++.+|++++ ..++. ..+ .++|+|||+++......+ ...+++|+.|+.++++++++. ++++||++||..+++
T Consensus 66 ~~~~Dl~d~-----~~~l~-~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g 137 (251)
T PLN00141 66 IVRADVTEG-----SDKLV-EAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNG 137 (251)
T ss_pred EEEeeCCCC-----HHHHH-HHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccC
Confidence 999999852 13333 445 689999999886432122 223578999999999999886 789999999999987
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
...+......|. . . .....|..+|..+|+++++ .
T Consensus 138 ~~~~~~~~~~~~------~------~--------------------------------~~~~~~~~~k~~~e~~l~~--~ 171 (251)
T PLN00141 138 AAMGQILNPAYI------F------L--------------------------------NLFGLTLVAKLQAEKYIRK--S 171 (251)
T ss_pred CCcccccCcchh------H------H--------------------------------HHHHHHHHHHHHHHHHHHh--c
Confidence 532110000000 0 0 0112355679999988876 6
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++++||+.+++... .+ ... +..........|+.+|+|+++..++.... ....
T Consensus 172 gi~~~iirpg~~~~~~~---~~------------------~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~~~~---~~~~ 226 (251)
T PLN00141 172 GINYTIVRPGGLTNDPP---TG------------------NIV-MEPEDTLYEGSISRDQVAEVAVEALLCPE---SSYK 226 (251)
T ss_pred CCcEEEEECCCccCCCC---Cc------------------eEE-ECCCCccccCcccHHHHHHHHHHHhcChh---hcCc
Confidence 89999999999987531 11 100 00111112346899999999999986322 2256
Q ss_pred eEEeccCCCCc-ccHHhHHHHHhh
Q 008315 328 IYHVGSSLRNP-VTLVSILDYGFV 350 (570)
Q Consensus 328 iyn~~s~~~~~-it~~el~~~~~~ 350 (570)
++.+.+...++ .++.+++..+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 227 VVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred EEEEecCCCCCchhHHHHHHHhhc
Confidence 78888754454 889998887754
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=173.76 Aligned_cols=209 Identities=14% Similarity=0.169 Sum_probs=146.1
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+||||||||++|++++++|+++|++ |.+++|+..... ..+++.+.+|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~---V~~~~R~~~~~~------------------------------~~~~~~~~~d 47 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVP---FLVASRSSSSSA------------------------------GPNEKHVKFD 47 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCc---EEEEeCCCcccc------------------------------CCCCcccccc
Confidence 4899999999999999999999875 478999765321 1345677899
Q ss_pred CCCCCCCCChhhhHHHHh------CC-ccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 94 ISSEDLGLKDSNLKEELW------NE-LDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~------~~-vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+ .+.+..++ ++ +|.|||+++... +. ...+.+++++|++. ++++||++||..++
T Consensus 48 ~~d-------~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~---------~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 48 WLD-------EDTWDNPFSSDDGMEPEISAVYLVAPPIP-DL---------APPMIKFIDFARSK-GVRRFVLLSASIIE 109 (285)
T ss_pred CCC-------HHHHHHHHhcccCcCCceeEEEEeCCCCC-Ch---------hHHHHHHHHHHHHc-CCCEEEEeeccccC
Confidence 984 44445666 56 999999988642 11 23456889999998 89999999987653
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 246 (570)
.... .+...|..+.+ .
T Consensus 110 ~~~~---------------------------------------------------------------~~~~~~~~l~~-~ 125 (285)
T TIGR03649 110 KGGP---------------------------------------------------------------AMGQVHAHLDS-L 125 (285)
T ss_pred CCCc---------------------------------------------------------------hHHHHHHHHHh-c
Confidence 2100 01122344433 1
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.++.....+. +... +. ..|. ...+.++...++|+++|+|+++..++... ...+
T Consensus 126 ~gi~~tilRp~~f~~~~~~~~--~~~~-------~~--~~~~--~~~~~g~~~~~~v~~~Dva~~~~~~l~~~---~~~~ 189 (285)
T TIGR03649 126 GGVEYTVLRPTWFMENFSEEF--HVEA-------IR--KENK--IYSATGDGKIPFVSADDIARVAYRALTDK---VAPN 189 (285)
T ss_pred cCCCEEEEeccHHhhhhcccc--cccc-------cc--cCCe--EEecCCCCccCcccHHHHHHHHHHHhcCC---CcCC
Confidence 489999999998886432110 0000 00 1122 33455778899999999999999887632 1225
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++|+++++ .++|+.|+++.+.+.+|++
T Consensus 190 ~~~~l~g~--~~~s~~eia~~l~~~~g~~ 216 (285)
T TIGR03649 190 TDYVVLGP--ELLTYDDVAEILSRVLGRK 216 (285)
T ss_pred CeEEeeCC--ccCCHHHHHHHHHHHhCCc
Confidence 78999998 8999999999999999875
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-17 Score=169.38 Aligned_cols=236 Identities=17% Similarity=0.171 Sum_probs=152.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++++++|++.|. +|+++.|+.. ++. + ++++. ..++.++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~---~v~~~~r~~~------~~~-~---------~~~~~--------~~~~~~~~ 54 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGD---RVAATVRRPD------ALD-D---------LKARY--------GDRLWVLQ 54 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-H---------HHHhc--------cCceEEEE
Confidence 37899999999999999999999985 4578888632 111 1 11111 24678999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH---ccCc
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK---CVKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~---~~~l 154 (570)
+|++++ +..+.++ .++|+|||+||..... +.++..+++|+.|+.++++++.. ..+.
T Consensus 55 ~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 127 (276)
T PRK06482 55 LDVTDS-------AAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGG 127 (276)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 999963 2222332 3589999999976432 23566788999999999999832 1256
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||...... + ...+.|+.|
T Consensus 128 ~~iv~~sS~~~~~~---------~-----------------------------------------------~~~~~Y~~s 151 (276)
T PRK06482 128 GRIVQVSSEGGQIA---------Y-----------------------------------------------PGFSLYHAT 151 (276)
T ss_pred CEEEEEcCcccccC---------C-----------------------------------------------CCCchhHHH
Confidence 79999999643211 0 124689999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC--CCcccccc-chH-HHHHHHhcCCCceeecCCCceeecchH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF--PGWVEDLK-TIN-ALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~--~gw~~~~~-~~~-~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+..|.+++.+ ..+++++++||+.+..+..... ........ .+. .+......|.. .-+.++
T Consensus 152 K~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~d~ 221 (276)
T PRK06482 152 KWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF----------AIPGDP 221 (276)
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC----------CCCCCH
Confidence 99999988765 2589999999998833321100 11111111 111 11122222211 113568
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
++++++++.++... ..+..||++++ +..+..++++.+.+..+
T Consensus 222 ~~~~~a~~~~~~~~----~~~~~~~~g~~--~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 222 QKMVQAMIASADQT----PAPRRLTLGSD--AYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHHHHHcCC----CCCeEEecChH--HHHHHHHHHHHHHHHHH
Confidence 99999999988522 22467999998 77777777776665543
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.9e-18 Score=163.98 Aligned_cols=259 Identities=16% Similarity=0.163 Sum_probs=192.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHH-HHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAAL-RFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~-rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+|+.||||-||+-|.+|++.||+.|++| +.++|..+..+... ++. +. | ..-..++..+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~V---hGi~Rrss~~n~~ri~L~----~~----------~----~~~~~~l~l~ 60 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEV---HGIKRRSSSFNTPRIHLY----ED----------P----HLNDPRLHLH 60 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEE---EEEeeccccCCcccceec----cc----------c----ccCCceeEEE
Confidence 5899999999999999999999999876 78888765443221 211 11 1 1112458999
Q ss_pred EccCCCCCCCCChhhhHHHHhC--CccEEEEcCccC----CcccCHHHHHHHHHHHHHHHHHHHHHccC-ceEEEEEecc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAIT----KFDERYDVAFGINTLGAIHLVNFAKKCVK-LKVFVHVSTA 163 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v----~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~-lk~fV~vSTa 163 (570)
.||+++ ...+.++++ ++|-|+|+||.. +|+++ ....+++..||.++|++.+.... -.+|...||.
T Consensus 61 ~gDLtD-------~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P-~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS 132 (345)
T COG1089 61 YGDLTD-------SSNLLRILEEVQPDEIYNLAAQSHVGVSFEQP-EYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS 132 (345)
T ss_pred eccccc-------hHHHHHHHHhcCchhheeccccccccccccCc-ceeeeechhHHHHHHHHHHHhCCcccEEEecccH
Confidence 999994 443446665 579999999974 56554 44478999999999999998732 3689999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
..+|.- .|.+..|..|+ .+.++|+.+|..|-.+..
T Consensus 133 E~fG~v----~~~pq~E~TPF-----------------------------------------yPrSPYAvAKlYa~W~tv 167 (345)
T COG1089 133 ELYGLV----QEIPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITV 167 (345)
T ss_pred HhhcCc----ccCccccCCCC-----------------------------------------CCCCHHHHHHHHHHheee
Confidence 999864 36666665655 357899999999999988
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCcee-ecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL-VGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~-~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.| ..|+-+|. .|.=..+.|.-|-.---+.++..+..+..|....+ .|+-+..+||-+..|.+++|...+.+..
T Consensus 168 NYResYgl~Acn----GILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~ 243 (345)
T COG1089 168 NYRESYGLFACN----GILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEE 243 (345)
T ss_pred ehHhhcCceeec----ceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccCC
Confidence 77 34554443 22233444555544444667777888888887665 4899999999999999999998886321
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++-|.++++ ...|.+|++++.++..|..
T Consensus 244 -----PddyViATg--~t~sVrefv~~Af~~~g~~ 271 (345)
T COG1089 244 -----PDDYVIATG--ETHSVREFVELAFEMVGID 271 (345)
T ss_pred -----CCceEEecC--ceeeHHHHHHHHHHHcCce
Confidence 567999999 8899999999999988843
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-17 Score=163.44 Aligned_cols=228 Identities=14% Similarity=0.134 Sum_probs=146.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||.+++++|++.|++ |+++.|+.... +++.++ +++ . ..++.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~---v~~~~r~~~~~---~~~~~~---------~~~-~--------~~~~~~ 60 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAA---VAIADLNQDGA---NAVADE---------INK-A--------GGKAIG 60 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCChHHH---HHHHHH---------HHh-c--------CceEEE
Confidence 46899999999999999999999999975 46777764321 122111 111 0 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHH----HHHHHHHH-HH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLG----AIHLVNFA-KK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~g----t~~ll~~a-~~ 150 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.| +..+++++ +.
T Consensus 61 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 133 (262)
T PRK13394 61 VAMDVTN-------EDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD 133 (262)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 9999995 333333333 489999999975432 2355668899999 66667766 44
Q ss_pred ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 151 ~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
. +.+++|++||.+..... ...+.
T Consensus 134 ~-~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~ 156 (262)
T PRK13394 134 D-RGGVVIYMGSVHSHEAS--------------------------------------------------------PLKSA 156 (262)
T ss_pred c-CCcEEEEEcchhhcCCC--------------------------------------------------------CCCcc
Confidence 3 67899999996543211 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCC-CCCCcccccc-chHHHHHHHhcCCCceeecCCCceeecc
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKE-PFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~-p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
|+.+|+..+.+++.+ ..++.++++||+.++++... ..+....... .....+.. +...+....+++
T Consensus 157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 228 (262)
T PRK13394 157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKK--------VMLGKTVDGVFT 228 (262)
T ss_pred cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHH--------HHhcCCCCCCCC
Confidence 999999888877654 35799999999999986421 1111000000 00011111 112234456899
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++|++++++.++.... ....+.+|++.++
T Consensus 229 ~~~dva~a~~~l~~~~~-~~~~g~~~~~~~g 258 (262)
T PRK13394 229 TVEDVAQTVLFLSSFPS-AALTGQSFVVSHG 258 (262)
T ss_pred CHHHHHHHHHHHcCccc-cCCcCCEEeeCCc
Confidence 99999999998886332 2223678988875
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-16 Score=155.38 Aligned_cols=221 Identities=16% Similarity=0.141 Sum_probs=139.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++||||||+||||++++++|++.|+ +|+++.|+.... .+.+.++ +.... ...+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~---~v~~~~r~~~~~--~~~~~~~---------~~~~~--------~~~~~~ 61 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGY---RVAIHYHRSAAE--ADALAAE---------LNALR--------PGSAAA 61 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCCHHH--HHHHHHH---------HHhhc--------CCceEE
Confidence 3678999999999999999999999986 457777764321 1111111 11111 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc--cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... +.
T Consensus 62 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 134 (249)
T PRK09135 62 LQADLLD-------PDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ 134 (249)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC
Confidence 9999995 333334433 58999999996431 1335677899999999999999653 11
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-..++.+|+.. +. .+. .+.+.|+.
T Consensus 135 ~~~~~~~~~~~--~~-------~~~-----------------------------------------------~~~~~Y~~ 158 (249)
T PRK09135 135 RGAIVNITDIH--AE-------RPL-----------------------------------------------KGYPVYCA 158 (249)
T ss_pred CeEEEEEeChh--hc-------CCC-----------------------------------------------CCchhHHH
Confidence 23455544321 11 111 23468999
Q ss_pred HHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 234 TKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 234 sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
||+.+|.+++.+ ..+++++++||+.++++...+ ++.. ........+.. + .-..+++|+|
T Consensus 159 sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~--~~~~------~~~~~~~~~~~--~-------~~~~~~~d~a 221 (249)
T PRK09135 159 AKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN--SFDE------EARQAILARTP--L-------KRIGTPEDIA 221 (249)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc--cCCH------HHHHHHHhcCC--c-------CCCcCHHHHH
Confidence 999999999875 246999999999999986521 1111 11111111111 1 1123589999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++..++... ....+.+||++++
T Consensus 222 ~~~~~~~~~~--~~~~g~~~~i~~g 244 (249)
T PRK09135 222 EAVRFLLADA--SFITGQILAVDGG 244 (249)
T ss_pred HHHHHHcCcc--ccccCcEEEECCC
Confidence 9996665422 1224789999987
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=160.37 Aligned_cols=236 Identities=14% Similarity=0.127 Sum_probs=152.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+||||||||+||++++++|+++|+ +|+++.|+.... +.+. +.. ..++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~---~V~~~~r~~~~~---~~~~-------------~~~--------~~~~~~~ 54 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGD---RVVATARDTATL---ADLA-------------EKY--------GDRLLPL 54 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH-------------Hhc--------cCCeeEE
Confidence 578999999999999999999999985 457888864321 1111 111 2457888
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHH----Hcc
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAK----KCV 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~ 152 (570)
.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.++..+++.+. +.
T Consensus 55 ~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 126 (275)
T PRK08263 55 ALDVTDR-------AAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ- 126 (275)
T ss_pred EccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence 9999953 2222332 3689999999976432 3567789999999988888763 32
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||...+.... ....|+
T Consensus 127 ~~~~iv~vsS~~~~~~~~--------------------------------------------------------~~~~Y~ 150 (275)
T PRK08263 127 RSGHIIQISSIGGISAFP--------------------------------------------------------MSGIYH 150 (275)
T ss_pred CCCEEEEEcChhhcCCCC--------------------------------------------------------CccHHH
Confidence 567999999977654321 135799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec-chHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV-IPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~-VpVD 306 (570)
.||+..|.++... ..+++++++||+.+..+...+.............+...... ......+ +.++
T Consensus 151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~ 221 (275)
T PRK08263 151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPE 221 (275)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHH
Confidence 9999988887654 35899999999998775442111111110000111111111 0111234 7789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhh
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~ 351 (570)
|+|++++.++.... ..+. |.++++ ..++++.++.+.+.++
T Consensus 222 dva~~~~~l~~~~~---~~~~-~~~~~~-~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 222 AAAEALLKLVDAEN---PPLR-LFLGSG-VLDLAKADYERRLATW 261 (275)
T ss_pred HHHHHHHHHHcCCC---CCeE-EEeCch-HHHHHHHHHHHHHHHH
Confidence 99999999886321 1134 444443 1578888888888764
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-16 Score=170.29 Aligned_cols=246 Identities=16% Similarity=0.139 Sum_probs=156.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.+.|++||||||||+||++++++|++.|++ |.+++|+.... +++.+++.+.. +... + .....++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~---Vval~Rn~ekl---~~l~~~l~~~~----L~~~-G----a~~~~~v 140 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFR---VRAGVRSAQRA---ESLVQSVKQMK----LDVE-G----TQPVEKL 140 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCe---EEEEeCCHHHH---HHHHHHhhhhc----cccc-c----ccccCce
Confidence 4467899999999999999999999999964 57888875332 12111110000 0000 0 0012468
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
.++.||+++ .+..+..+.++|+|||+||..... ..+...+++|+.|+.+++++|++. ++++||++||.+++
T Consensus 141 ~iV~gDLtD-------~esI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~ 212 (576)
T PLN03209 141 EIVECDLEK-------PDQIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTN 212 (576)
T ss_pred EEEEecCCC-------HHHHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhc
Confidence 999999994 444457788999999999875321 234566889999999999999987 88999999998763
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 246 (570)
.... .+..+ .....|...|..+|..+.+
T Consensus 213 ~~g~---p~~~~-----------------------------------------------~sk~~~~~~KraaE~~L~~-- 240 (576)
T PLN03209 213 KVGF---PAAIL-----------------------------------------------NLFWGVLCWKRKAEEALIA-- 240 (576)
T ss_pred ccCc---cccch-----------------------------------------------hhHHHHHHHHHHHHHHHHH--
Confidence 1100 00000 0123577788999988876
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.|+++++|||+.+.++..+. ... +.+.....+ ....-.+..+|||++++.++.+... ..+
T Consensus 241 sGIrvTIVRPG~L~tp~d~~----~~t-------------~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~a--s~~ 300 (576)
T PLN03209 241 SGLPYTIVRPGGMERPTDAY----KET-------------HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRRL--SYC 300 (576)
T ss_pred cCCCEEEEECCeecCCcccc----ccc-------------cceeecccc-ccCCCccCHHHHHHHHHHHHcCchh--ccc
Confidence 78999999999997653221 000 001000111 1112347889999999998863321 236
Q ss_pred ceEEeccCCCCc-ccHHhHHHHH
Q 008315 327 NIYHVGSSLRNP-VTLVSILDYG 348 (570)
Q Consensus 327 ~iyn~~s~~~~~-it~~el~~~~ 348 (570)
.+|.+.++...+ ..+.++++.+
T Consensus 301 kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 301 KVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred eEEEEEeCCCCCCCCHHHHHHhc
Confidence 789998863222 3455555443
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=156.48 Aligned_cols=227 Identities=14% Similarity=0.150 Sum_probs=145.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+||||||||+||+.|+++|+++|+ +|+++.|+... .+.+.+++ .. ...++.++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~---~v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~~~ 56 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA---NVVVNDLGEAG---AEAAAKVA---------TD---------AGGSVIYLV 56 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh---------cCCceEEEE
Confidence 47899999999999999999999986 46788886422 12222111 10 024688999
Q ss_pred ccCCCCCCCCChhhh------HHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCce
Q 008315 92 GDISSEDLGLKDSNL------KEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLK 155 (570)
Q Consensus 92 gDl~~~~lgls~~~~------~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk 155 (570)
+|++++ ++. .......+|+|||+|+..... +.++..+++|+.|+..+++.+... .+.+
T Consensus 57 ~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~ 130 (255)
T TIGR01963 57 ADVTKE------DEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWG 130 (255)
T ss_pred CCCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe
Confidence 999953 211 112235689999999975421 224566889999998888877421 2678
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||...+... ...+.|+.+|
T Consensus 131 ~~v~~ss~~~~~~~--------------------------------------------------------~~~~~y~~sk 154 (255)
T TIGR01963 131 RIINIASAHGLVAS--------------------------------------------------------PFKSAYVAAK 154 (255)
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------CCCchhHHHH
Confidence 99999997554321 1135699999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCC-CCC-Cc-cccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKE-PFP-GW-VEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~-p~~-gw-~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
+..|.+++.+ ..+++++++||+.++++... .++ .+ ..+... ...+.. ....+....++++++|
T Consensus 155 ~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~d 225 (255)
T TIGR01963 155 HGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPE-EQVIRE--------VMLPGQPTKRFVTVDE 225 (255)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCc-hHHHHH--------HHHccCccccCcCHHH
Confidence 9888887654 24899999999999886421 000 00 000000 000000 0112334567999999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ....+++|+++++
T Consensus 226 ~a~~~~~~~~~~~-~~~~g~~~~~~~g 251 (255)
T TIGR01963 226 VAETALFLASDAA-AGITGQAIVLDGG 251 (255)
T ss_pred HHHHHHHHcCccc-cCccceEEEEcCc
Confidence 9999999886422 2223678999876
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=5e-16 Score=154.32 Aligned_cols=221 Identities=14% Similarity=0.107 Sum_probs=148.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+|+||||||++|.+++++|+++|+ +|+++.|+.... +...++ ++.. ..++.+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~---~V~~~~r~~~~~---~~~~~~---------l~~~---------~~~~~~ 59 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA---EVIVVDICGDDA---AATAEL---------VEAA---------GGKARA 59 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHhc---------CCeEEE
Confidence 4689999999999999999999999986 467888874321 111111 1111 145889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D---ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~---~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+|+.... + +.+...+++|+.++.++++.+... .
T Consensus 60 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12826 60 RQVDVRD-------RAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA 132 (251)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 68999999988654 1 345667899999999999987431 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.++||++||....... . .....|+
T Consensus 133 ~~~~ii~~ss~~~~~~~--------~-----------------------------------------------~~~~~y~ 157 (251)
T PRK12826 133 GGGRIVLTSSVAGPRVG--------Y-----------------------------------------------PGLAHYA 157 (251)
T ss_pred CCcEEEEEechHhhccC--------C-----------------------------------------------CCccHHH
Confidence 56789999998665110 0 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+.+|.++... ..+++++++||+.++++...+... ..+...+..+ .+ ...+++++|
T Consensus 158 ~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--------~~~~~~~~~~----~~-----~~~~~~~~d 220 (251)
T PRK12826 158 ASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--------AQWAEAIAAA----IP-----LGRLGEPED 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--------hHHHHHHHhc----CC-----CCCCcCHHH
Confidence 9999999988765 347999999999999875432211 0001111111 11 114789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++.... ....+++|++.++
T Consensus 221 va~~~~~l~~~~~-~~~~g~~~~~~~g 246 (251)
T PRK12826 221 IAAAVLFLASDEA-RYITGQTLPVDGG 246 (251)
T ss_pred HHHHHHHHhCccc-cCcCCcEEEECCC
Confidence 9999988764322 2224789999876
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.2e-16 Score=154.29 Aligned_cols=219 Identities=16% Similarity=0.193 Sum_probs=146.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||++|++|+++|+++|++| .+++|+... ..+.+.+++ .. ...++.+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v---~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~~ 60 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADV---VVHYRSDEE--AAEELVEAV---------EA---------LGRRAQA 60 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeE---EEEeCCCHH--HHHHHHHHH---------Hh---------cCCceEE
Confidence 457899999999999999999999999754 455665432 112221111 10 1256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHH----Hc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAK----KC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (570)
+.+|++++ +..+.++ .++|+|||+||..... +.+...+++|+.++.++++.+. +.
T Consensus 61 ~~~D~~~~-------~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (249)
T PRK12825 61 VQADVTDK-------AALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ 133 (249)
T ss_pred EECCcCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 3223333 4689999999965332 2356778999999999999874 33
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+.++||++||...+.... ....|
T Consensus 134 -~~~~~i~~SS~~~~~~~~--------------------------------------------------------~~~~y 156 (249)
T PRK12825 134 -RGGRIVNISSVAGLPGWP--------------------------------------------------------GRSNY 156 (249)
T ss_pred -CCCEEEEECccccCCCCC--------------------------------------------------------CchHH
Confidence 578999999987653211 13579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..|.++..+ ..+++++++||+.++++...+.. . ...... . . ......+++++
T Consensus 157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~---~-----~~~~~~----~--~----~~~~~~~~~~~ 218 (249)
T PRK12825 157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI---E-----EAREAK----D--A----ETPLGRSGTPE 218 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc---c-----hhHHhh----h--c----cCCCCCCcCHH
Confidence 99999998888654 35899999999999997543211 0 010100 0 0 01122378999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+++++..++... .....+++|+++++
T Consensus 219 dva~~~~~~~~~~-~~~~~g~~~~i~~g 245 (249)
T PRK12825 219 DIARAVAFLCSDA-SDYITGQVIEVTGG 245 (249)
T ss_pred HHHHHHHHHhCcc-ccCcCCCEEEeCCC
Confidence 9999998887532 22234789999987
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.1e-16 Score=154.90 Aligned_cols=221 Identities=16% Similarity=0.179 Sum_probs=143.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++++|+||||||+||.++++.|++.|+.| .++ .|+.. ..+...+ .+... ..++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v---~i~~~r~~~---~~~~~~~---------~~~~~---------~~~~~ 59 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALV---AIHYGRNKQ---AADETIR---------EIESN---------GGKAF 59 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEE---EEEcCCCHH---HHHHHHH---------HHHhc---------CCcEE
Confidence 467999999999999999999999998643 343 45421 1111111 11110 14678
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHH
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a 148 (570)
++.+|++++ ++ ...+++ ++|+|||+||..... +.++..+++|+.|+.++++.+
T Consensus 60 ~~~~D~~d~------~~-i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 132 (254)
T PRK12746 60 LIEADLNSI------DG-VKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQT 132 (254)
T ss_pred EEEcCcCCH------HH-HHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 899999953 22 223332 589999999974321 124666889999999999998
Q ss_pred HHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+. .+..+||++||..++.... .
T Consensus 133 ~~~~~~~~~~v~~sS~~~~~~~~--------------------------------------------------------~ 156 (254)
T PRK12746 133 LPLLRAEGRVINISSAEVRLGFT--------------------------------------------------------G 156 (254)
T ss_pred HHHhhcCCEEEEECCHHhcCCCC--------------------------------------------------------C
Confidence 763 3445899999987754211 2
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+++.. ..++++++++|+.+.++..... .. . ..+.....+. .....+
T Consensus 157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~---~--~~~~~~~~~~--------~~~~~~ 220 (254)
T PRK12746 157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL---LD---D--PEIRNFATNS--------SVFGRI 220 (254)
T ss_pred CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh---cc---C--hhHHHHHHhc--------CCcCCC
Confidence 356999999999987654 3579999999999987643211 00 0 1111111111 112356
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++|+|+++..++.... ..-.+++|++.++
T Consensus 221 ~~~~dva~~~~~l~~~~~-~~~~g~~~~i~~~ 251 (254)
T PRK12746 221 GQVEDIADAVAFLASSDS-RWVTGQIIDVSGG 251 (254)
T ss_pred CCHHHHHHHHHHHcCccc-CCcCCCEEEeCCC
Confidence 789999999887765322 2223689999775
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7e-16 Score=154.02 Aligned_cols=228 Identities=14% Similarity=0.104 Sum_probs=143.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||++|++++++|++.|+. |+++.|+.... +++.+++ +. . ..++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~---v~~~~r~~~~~---~~~~~~~---------~~-~--------~~~~~~ 57 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAK---VVIADLNDEAA---AAAAEAL---------QK-A--------GGKAIG 57 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHHH---HHHHHHH---------Hh-c--------CCcEEE
Confidence 46799999999999999999999999864 57788864322 2222111 11 0 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHH----HHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (570)
+.+|++++ +..+.++ ..+|+|||+|+..... +.++..+++|+.|+..+++.+ ++.
T Consensus 58 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (258)
T PRK12429 58 VAMDVTDE-------EAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ 130 (258)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 99999953 3233333 3689999999975432 234556789999966555554 333
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+.++||++||........ ..+.|
T Consensus 131 -~~~~iv~iss~~~~~~~~--------------------------------------------------------~~~~y 153 (258)
T PRK12429 131 -GGGRIINMASVHGLVGSA--------------------------------------------------------GKAAY 153 (258)
T ss_pred -CCeEEEEEcchhhccCCC--------------------------------------------------------Ccchh
Confidence 678999999976543211 23568
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCcccccc-chHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.+|+..+.+.+.+ ..++.+.++||+.+.++...+. +.-..... ......... ........++++
T Consensus 154 ~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 225 (258)
T PRK12429 154 VSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDV--------LLPLVPQKRFTT 225 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHH--------HhccCCccccCC
Confidence 88888888776543 3579999999999988653210 00000000 000111111 111223356999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|+++..++..... ...+++|++.++
T Consensus 226 ~~d~a~~~~~l~~~~~~-~~~g~~~~~~~g 254 (258)
T PRK12429 226 VEEIADYALFLASFAAK-GVTGQAWVVDGG 254 (258)
T ss_pred HHHHHHHHHHHcCcccc-CccCCeEEeCCC
Confidence 99999999888754322 223678988775
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-15 Score=153.36 Aligned_cols=240 Identities=16% Similarity=0.190 Sum_probs=156.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||.++++.|++.|++ |+++.|+.... +.+.+++ .... ...++.+
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~---V~~~~r~~~~~---~~~~~~l---------~~~~-------~~~~~~~ 62 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAA---VMIVGRNPDKL---AAAAEEI---------EALK-------GAGAVRY 62 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEeCCHHHH---HHHHHHH---------Hhcc-------CCCceEE
Confidence 67899999999999999999999999964 57777764221 1111111 1000 0146788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|++++ +..+.+++ .+|+|||+||.... .+.+...+++|+.|+..+++.+.+.
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (276)
T PRK05875 63 EPADVTDE-------DQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVR 135 (276)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999953 22334433 68999999986421 1235667899999999999877542
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.+||++||..+.... ...+.|
T Consensus 136 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 159 (276)
T PRK05875 136 GGGGSFVGISSIAASNTH--------------------------------------------------------RWFGAY 159 (276)
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------CCCcch
Confidence 133589999998764321 124689
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..|.+++.+ ..++.++++||+.+.++...+. .. .......+..+ .....++.++
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~---~~----~~~~~~~~~~~---------~~~~~~~~~~ 223 (276)
T PRK05875 160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI---TE----SPELSADYRAC---------TPLPRVGEVE 223 (276)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc---cc----CHHHHHHHHcC---------CCCCCCcCHH
Confidence 99999999999865 3579999999998876533210 00 01111111111 1122356799
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccCCCCcc----cHHhHHHHHhhhcc
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPV----TLVSILDYGFVYFT 353 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~~~~~i----t~~el~~~~~~~~~ 353 (570)
|+|+++..++..... ...+++|+++++ ..+ +..|+++.+.+..+
T Consensus 224 dva~~~~~l~~~~~~-~~~g~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 224 DVANLAMFLLSDAAS-WITGQVINVDGG--HMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred HHHHHHHHHcCchhc-CcCCCEEEECCC--eeccCCccHHHHHHHHhhHHH
Confidence 999999988764322 223789999887 444 77777777665433
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-16 Score=157.86 Aligned_cols=226 Identities=15% Similarity=0.185 Sum_probs=146.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+++||||||||+||.++++.|+++|+. |+++.|+.... +.+.+ +. ..++.+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~~---~~~~~-------------~~--------~~~~~~ 56 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGAR---VVIADIKPARA---RLAAL-------------EI--------GPAAIA 56 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEcCCHHHH---HHHHH-------------Hh--------CCceEE
Confidence 56899999999999999999999999964 56777754221 11111 10 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHcc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCV--- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (570)
+.+|++++ +..+.++ ..+|++||+||..... +.++..+++|+.++..+++++...-
T Consensus 57 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (257)
T PRK07067 57 VSLDVTRQ-------DSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQ 129 (257)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhc
Confidence 99999953 2233333 3689999999975431 3466779999999999999986421
Q ss_pred -CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 -~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.-.++|++||....... .....|
T Consensus 130 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 153 (257)
T PRK07067 130 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVSHY 153 (257)
T ss_pred CCCcEEEEeCCHHhCCCC--------------------------------------------------------CCCchh
Confidence 12479999996432111 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccccc-chHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+++.. ..+++++++||+.|.++..+.......... ...+.. ....+.......+.++
T Consensus 154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 225 (257)
T PRK07067 154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEK--------KRLVGEAVPLGRMGVP 225 (257)
T ss_pred hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHH--------HHHHhhcCCCCCccCH
Confidence 99999988887654 458999999999998864321100000000 000000 0111223335578899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... .-.+.+|++.++
T Consensus 226 ~dva~~~~~l~s~~~~-~~~g~~~~v~gg 253 (257)
T PRK07067 226 DDLTGMALFLASADAD-YIVAQTYNVDGG 253 (257)
T ss_pred HHHHHHHHHHhCcccc-cccCcEEeecCC
Confidence 9999999988864321 224789999876
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.4e-16 Score=154.17 Aligned_cols=225 Identities=16% Similarity=0.141 Sum_probs=144.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+|||||||||++++++|++.|++ |+++.|+... ..+.+.++ ++.. ..++..
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~---V~~~~r~~~~--~~~~~~~~---------l~~~---------~~~~~~ 60 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAH---VVVNYRQKAP--RANKVVAE---------IEAA---------GGRASA 60 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCE---EEEEeCCchH--hHHHHHHH---------HHhc---------CCceEE
Confidence 46899999999999999999999999864 4677786432 11222211 1110 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHV 160 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~v 160 (570)
+.+|++++ ++ .+.++ .++|+|||+|+.... ...+...+++|+.|+.++++.+.+. ..-.++|++
T Consensus 61 ~~~D~~~~------~~-~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~i 133 (248)
T PRK07806 61 VGADLTDE------ES-VAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFV 133 (248)
T ss_pred EEcCCCCH------HH-HHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEE
Confidence 99999963 22 22333 368999999986422 2234566889999999999999864 223589999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||........ .+ .. .....|+.||+.+|.
T Consensus 134 sS~~~~~~~~---~~-~~-----------------------------------------------~~~~~Y~~sK~a~e~ 162 (248)
T PRK07806 134 TSHQAHFIPT---VK-TM-----------------------------------------------PEYEPVARSKRAGED 162 (248)
T ss_pred eCchhhcCcc---cc-CC-----------------------------------------------ccccHHHHHHHHHHH
Confidence 9954321100 00 00 113579999999999
Q ss_pred HHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHH
Q 008315 241 IMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 241 ~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
+++.. ..++++++++|+.+-++....+ ... ...+.+.. . .....++++++|+|++++.+
T Consensus 163 ~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~---~~~--~~~~~~~~-----~------~~~~~~~~~~~dva~~~~~l 226 (248)
T PRK07806 163 ALRALRPELAEKGIGFVVVSGDMIEGTVTATL---LNR--LNPGAIEA-----R------REAAGKLYTVSEFAAEVARA 226 (248)
T ss_pred HHHHHHHHhhccCeEEEEeCCccccCchhhhh---hcc--CCHHHHHH-----H------HhhhcccCCHHHHHHHHHHH
Confidence 98775 3578899999887765422100 000 00000000 0 01123689999999999999
Q ss_pred HHHhcCCCCCCceEEeccC
Q 008315 316 MVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 316 ~~~~~~~~~~~~iyn~~s~ 334 (570)
+... ...+++|+++++
T Consensus 227 ~~~~---~~~g~~~~i~~~ 242 (248)
T PRK07806 227 VTAP---VPSGHIEYVGGA 242 (248)
T ss_pred hhcc---ccCccEEEecCc
Confidence 8732 224789999887
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.5e-16 Score=153.03 Aligned_cols=219 Identities=14% Similarity=0.123 Sum_probs=143.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.|+.| +++.|.... ..+.+. +.++.. ..++.+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v---~~~~~~~~~--~~~~~~---------~~l~~~---------~~~~~~ 60 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKV---VINYNSSKE--AAENLV---------NELGKE---------GHDVYA 60 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEE---EEEcCCcHH--HHHHHH---------HHHHhc---------CCeEEE
Confidence 478999999999999999999999998654 444443211 111111 111111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+....+++ .+|+|||+||..... +.+++.+++|+.|+..+++.+... .
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (247)
T PRK12935 61 VQADVSK-------VEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA 133 (247)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 332334433 489999999985421 346677899999999999998753 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||.+..... .....|+
T Consensus 134 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (247)
T PRK12935 134 EEGRIISISSIIGQAGG--------------------------------------------------------FGQTNYS 157 (247)
T ss_pred CCcEEEEEcchhhcCCC--------------------------------------------------------CCCcchH
Confidence 34689999996554221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++++++++|+.|.++..... +.........+. ...++.+++|
T Consensus 158 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~ed 219 (247)
T PRK12935 158 AAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---------PEEVRQKIVAKI---------PKKRFGQADE 219 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---------cHHHHHHHHHhC---------CCCCCcCHHH
Confidence 9999888777554 3489999999999876432111 111111111111 1235789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++++.++... ....+++||+.++
T Consensus 220 va~~~~~~~~~~--~~~~g~~~~i~~g 244 (247)
T PRK12935 220 IAKGVVYLCRDG--AYITGQQLNINGG 244 (247)
T ss_pred HHHHHHHHcCcc--cCccCCEEEeCCC
Confidence 999999887532 1124789999876
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.7e-16 Score=156.52 Aligned_cols=230 Identities=14% Similarity=0.146 Sum_probs=143.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++++++|||||||++|++++++|+++|+. |+++.|+..... .+.+++ +.. ....++++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~~~---~~~~~~---------~~~-------~~~~~~~~ 58 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYL---VIATMRNPEKQE---NLLSQA---------TQL-------NLQQNIKV 58 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCE---EEEEeCCHHHHH---HHHHHH---------Hhc-------CCCCceeE
Confidence 36789999999999999999999999864 567778643221 111111 000 01246899
Q ss_pred EEccCCCCCCCCChhhhH--HHH---hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 90 VAGDISSEDLGLKDSNLK--EEL---WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~--~~l---~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
+.+|++++ ++.. +.+ ...+|+|||+||..... +.++..+++|+.|+.++++.+... .+.
T Consensus 59 ~~~D~~d~------~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (280)
T PRK06914 59 QQLDVTDQ------NSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS 132 (280)
T ss_pred EecCCCCH------HHHHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 99999963 2221 112 24689999999875421 345667889999999998886321 256
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||....... ...+.|+.|
T Consensus 133 ~~iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (280)
T PRK06914 133 GKIINISSISGRVGF--------------------------------------------------------PGLSPYVSS 156 (280)
T ss_pred CEEEEECcccccCCC--------------------------------------------------------CCCchhHHh
Confidence 789999986543211 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccc---ccch-HHHHHHHhcCCCceeecCCCceeecchH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVED---LKTI-NALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~---~~~~-~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+..|.+++.. ..+++++++||+.+.++..++....... .... ...+.... ... ......++++
T Consensus 157 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~ 229 (280)
T PRK06914 157 KYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ----KHI---NSGSDTFGNP 229 (280)
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHH----HHH---hhhhhccCCH
Confidence 99999888764 3489999999999987643221110000 0000 01111100 000 0112356889
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++.+.. . ...|+++++
T Consensus 230 ~dva~~~~~~~~~~~--~--~~~~~~~~~ 254 (280)
T PRK06914 230 IDVANLIVEIAESKR--P--KLRYPIGKG 254 (280)
T ss_pred HHHHHHHHHHHcCCC--C--CcccccCCc
Confidence 999999999986321 1 246888765
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.1e-15 Score=147.24 Aligned_cols=217 Identities=18% Similarity=0.176 Sum_probs=144.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+++.+++ +.. ..++..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~vi~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 59 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGA---SVVVADINAEG---AERVAKQI---------VAD---------GGTAIA 59 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 4789999999999999999999999986 45788876432 12222111 110 135678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------c---cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------D---ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~---~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|++++ +..+.++ ..+|+|||+||.... + +.++..+++|+.|+.++++++...
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (250)
T PRK07774 60 VQVDVSDP-------DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHM 132 (250)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 89999953 2222332 368999999997421 1 235566899999999999998764
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+-++||++||..++. ..+
T Consensus 133 ~~~~~~~iv~~sS~~~~~-----------------------------------------------------------~~~ 153 (250)
T PRK07774 133 AKRGGGAIVNQSSTAAWL-----------------------------------------------------------YSN 153 (250)
T ss_pred HHhCCcEEEEEecccccC-----------------------------------------------------------Ccc
Confidence 1346899999977642 135
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..++++++++|+.+..+.... +. +..+...+.++.... -+..
T Consensus 154 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~---~~-----~~~~~~~~~~~~~~~---------~~~~ 216 (250)
T PRK07774 154 FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT---VT-----PKEFVADMVKGIPLS---------RMGT 216 (250)
T ss_pred ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc---cC-----CHHHHHHHHhcCCCC---------CCcC
Confidence 6999999999988765 347999999998887654321 11 112222233322111 1346
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++..... ...+++||+.++
T Consensus 217 ~~d~a~~~~~~~~~~~~-~~~g~~~~v~~g 245 (250)
T PRK07774 217 PEDLVGMCLFLLSDEAS-WITGQIFNVDGG 245 (250)
T ss_pred HHHHHHHHHHHhChhhh-CcCCCEEEECCC
Confidence 78999999888764321 124789999887
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-15 Score=148.47 Aligned_cols=225 Identities=15% Similarity=0.152 Sum_probs=145.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++||||||||+||++++++|++.|+. |+++.|+... .+++.+++ ++. ..++.+
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~---v~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 56 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAK---VAVFDLNREA---AEKVAADI---------RAK---------GGNAQA 56 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEecCCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 46899999999999999999999999864 5677776422 12222111 110 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+|+.... . +.++..+++|+.++.++++.+... .
T Consensus 57 ~~~d~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (250)
T TIGR03206 57 FACDITD-------RDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER 129 (250)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 33333433 358999999986421 1 234567899999999998887531 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+.... ....|+
T Consensus 130 ~~~~ii~iss~~~~~~~~--------------------------------------------------------~~~~Y~ 153 (250)
T TIGR03206 130 GAGRIVNIASDAARVGSS--------------------------------------------------------GEAVYA 153 (250)
T ss_pred CCeEEEEECchhhccCCC--------------------------------------------------------CCchHH
Confidence 567899999987664321 134699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..+++++++||+.++++......++.. .+..++..+..... ...+...+|
T Consensus 154 ~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~d 221 (250)
T TIGR03206 154 ACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAE---NPEKLREAFTRAIP---------LGRLGQPDD 221 (250)
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccC---ChHHHHHHHHhcCC---------ccCCcCHHH
Confidence 9998888777654 347999999999998764322212111 11122222222111 112345689
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++.... ..-.++++++.++
T Consensus 222 va~~~~~l~~~~~-~~~~g~~~~~~~g 247 (250)
T TIGR03206 222 LPGAILFFSSDDA-SFITGQVLSVSGG 247 (250)
T ss_pred HHHHHHHHcCccc-CCCcCcEEEeCCC
Confidence 9999998775332 2223788988765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=150.34 Aligned_cols=222 Identities=17% Similarity=0.160 Sum_probs=144.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+++|+||||||+||++++++|++.|+.| +.++.|+... .+.+.++ ++.. ..++.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v--~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 58 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDI--AVNYARSRKA---AEETAEE---------IEAL---------GRKALA 58 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEE--EEEcCCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 467999999999999999999999998754 2234564321 1111111 1111 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ ++..+.+++ .+|+|||+||..... +.++..+++|+.|+..+++++... .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (250)
T PRK08063 59 VKANVGD-------VEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV 131 (250)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 332334333 589999999864321 224456889999999999988653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.++||++||....... .....|+
T Consensus 132 ~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y~ 155 (250)
T PRK08063 132 GGGKIISLSSLGSIRYL--------------------------------------------------------ENYTTVG 155 (250)
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------CCccHHH
Confidence 45699999996543211 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++++++++|+.|..+.....+++ ..+.... .... ....+++.+|
T Consensus 156 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-------~~~~~~~-~~~~--------~~~~~~~~~d 219 (250)
T PRK08063 156 VSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-------EELLEDA-RAKT--------PAGRMVEPED 219 (250)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-------hHHHHHH-hcCC--------CCCCCcCHHH
Confidence 9999999998764 3579999999999976543322221 1111111 1111 1124688999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... ...++++++.++
T Consensus 220 va~~~~~~~~~~~~-~~~g~~~~~~gg 245 (250)
T PRK08063 220 VANAVLFLCSPEAD-MIRGQTIIVDGG 245 (250)
T ss_pred HHHHHHHHcCchhc-CccCCEEEECCC
Confidence 99999888754322 223678888776
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=141.48 Aligned_cols=242 Identities=17% Similarity=0.141 Sum_probs=171.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE--
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV-- 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v-- 90 (570)
++|||||+||.+|++|++.+...+++= ++..++
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~---------------------------------------------e~wvf~~s 36 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDD---------------------------------------------ENWVFIGS 36 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCC---------------------------------------------cceEEecc
Confidence 789999999999999999999877531 122221
Q ss_pred -EccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 91 -AGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 91 -~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
..|+++ .++ .+.+++ ++..|||+||.+.- +...-+.++.|+.--.|++..|.+. +++.+|.+.|.
T Consensus 37 kd~DLt~------~a~-t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclSt 108 (315)
T KOG1431|consen 37 KDADLTN------LAD-TRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLST 108 (315)
T ss_pred ccccccc------hHH-HHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcce
Confidence 356663 233 346654 58999999998752 2334567899999999999999998 89999999888
Q ss_pred cccCCCC-CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 164 YVAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 164 ~v~~~~~-g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
+++.+.. -+|+|......+| .+-.-.|.++|.++.-.-
T Consensus 109 CIfPdkt~yPIdEtmvh~gpp-----------------------------------------hpsN~gYsyAKr~idv~n 147 (315)
T KOG1431|consen 109 CIFPDKTSYPIDETMVHNGPP-----------------------------------------HPSNFGYSYAKRMIDVQN 147 (315)
T ss_pred eecCCCCCCCCCHHHhccCCC-----------------------------------------CCCchHHHHHHHHHHHHH
Confidence 8887643 2344432211000 011236899998888777
Q ss_pred HHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHH----HhcCC-CceeecCCCceeecchHHHHHHHHHHH
Q 008315 243 QQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVA----SAQGN-LPCLVGETKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~----~~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
+.| ..|-..+.+-|++|||+...-.| ++-.-..+++.. -..|. .-..+|.+...+.++++||+|++++..
T Consensus 148 ~aY~~qhg~~~tsviPtNvfGphDNfnp---e~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v 224 (315)
T KOG1431|consen 148 QAYRQQHGRDYTSVIPTNVFGPHDNFNP---ENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV 224 (315)
T ss_pred HHHHHHhCCceeeeccccccCCCCCCCc---ccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence 666 56788999999999999774322 121223344433 23343 457889999999999999999999998
Q ss_pred HHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 316 ~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+..-.. .+-.+++++....+|++|+++.+.++++-.
T Consensus 225 lr~Y~~----vEpiils~ge~~EVtI~e~aeaV~ea~~F~ 260 (315)
T KOG1431|consen 225 LREYEG----VEPIILSVGESDEVTIREAAEAVVEAVDFT 260 (315)
T ss_pred HHhhcC----ccceEeccCccceeEHHHHHHHHHHHhCCC
Confidence 874332 344778888667999999999999988754
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.6e-15 Score=148.13 Aligned_cols=222 Identities=14% Similarity=0.150 Sum_probs=142.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+|+|+||||+|+||++++++|+++|. +|+++.|+... .+.+. +.++.. ..++.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~---------~~~~~~---------~~~~~~ 63 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGF---PVALGARRVEK---CEELV---------DKIRAD---------GGEAVA 63 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCeEEE
Confidence 3568999999999999999999999986 45677775321 11111 111110 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 64 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~ 136 (274)
T PRK07775 64 FPLDVTDP-------DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER 136 (274)
T ss_pred EECCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 89999953 3233333 3689999999975321 234566899999999999887532 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||...+... .....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (274)
T PRK07775 137 RRGDLIFVGSDVALRQR--------------------------------------------------------PHMGAYG 160 (274)
T ss_pred CCceEEEECChHhcCCC--------------------------------------------------------CCcchHH
Confidence 44679999998665321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..+++++++||+.+.+....... . .....++...... + ......++++||
T Consensus 161 ~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~---~--~~~~~~~~~~~~~------~-~~~~~~~~~~~d 228 (274)
T PRK07775 161 AAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLP---A--EVIGPMLEDWAKW------G-QARHDYFLRASD 228 (274)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCC---h--hhhhHHHHHHHHh------c-ccccccccCHHH
Confidence 9999999998875 24899999999887554221100 1 1111111111110 0 112345899999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++... ..+.+||+.-.
T Consensus 229 va~a~~~~~~~~----~~~~~~~~~~~ 251 (274)
T PRK07775 229 LARAITFVAETP----RGAHVVNMEVQ 251 (274)
T ss_pred HHHHHHHHhcCC----CCCCeeEEeec
Confidence 999999888632 23568888653
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.7e-15 Score=147.56 Aligned_cols=221 Identities=14% Similarity=0.113 Sum_probs=146.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|+. |+++.|+.... +.+. +.++.. ..++.+
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~---------~~i~~~---------~~~~~~ 63 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAE---VILNGRDPAKL---AAAA---------ESLKGQ---------GLSAHA 63 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHH---------HHHHhc---------CceEEE
Confidence 58999999999999999999999999964 56777754211 1111 112111 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++.+. .
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (255)
T PRK07523 64 LAFDVTD-------HDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR 136 (255)
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 9999995 332334443 489999999975321 235677889999999999988653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 137 ~~g~iv~iss~~~~~~~--------------------------------------------------------~~~~~y~ 160 (255)
T PRK07523 137 GAGKIINIASVQSALAR--------------------------------------------------------PGIAPYT 160 (255)
T ss_pred CCeEEEEEccchhccCC--------------------------------------------------------CCCccHH
Confidence 45789999986543211 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..++++.++||+.+.++..... ... ..+...+.... ....+..++|
T Consensus 161 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~~d 224 (255)
T PRK07523 161 ATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL---VAD----PEFSAWLEKRT---------PAGRWGKVEE 224 (255)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh---ccC----HHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999988765 4589999999999988653211 100 01111111111 1223567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.++++++.++
T Consensus 225 va~~~~~l~~~~~~-~~~G~~i~~~gg 250 (255)
T PRK07523 225 LVGACVFLASDASS-FVNGHVLYVDGG 250 (255)
T ss_pred HHHHHHHHcCchhc-CccCcEEEECCC
Confidence 99999888753222 223678888876
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-15 Score=149.46 Aligned_cols=219 Identities=19% Similarity=0.192 Sum_probs=143.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|+||||||+||++++++|++.|++ |+++.|+..... +...+ .++.. ..++.++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~---vi~~~r~~~~~~--~~~~~---------~~~~~---------~~~~~~~~ 58 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFD---LAINDRPDDEEL--AATQQ---------ELRAL---------GVEVIFFP 58 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecCchhHH--HHHHH---------HHHhc---------CCceEEEE
Confidence 478999999999999999999999864 567777643211 11110 11110 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---------DERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+|++++ +....++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.+.
T Consensus 59 ~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (256)
T PRK12745 59 ADVADL-------SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQ 131 (256)
T ss_pred ecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhc
Confidence 999963 2222332 368999999987432 1346677999999999999887542
Q ss_pred cC-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 152 VK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 152 ~~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
.+ ..+||++||....... .
T Consensus 132 ~~~~~~~~~~iv~~sS~~~~~~~--------------------------------------------------------~ 155 (256)
T PRK12745 132 PEPEELPHRSIVFVSSVNAIMVS--------------------------------------------------------P 155 (256)
T ss_pred cCcCCCCCcEEEEECChhhccCC--------------------------------------------------------C
Confidence 11 5679999997664321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceee
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.+|+..|.+++.+ ..+++++++||+.+.++...+ +.+. .......+.. ....
T Consensus 156 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~---~~~~------~~~~~~~~~~--------~~~~ 218 (256)
T PRK12745 156 NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP---VTAK------YDALIAKGLV--------PMPR 218 (256)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc---cchh------HHhhhhhcCC--------CcCC
Confidence 2457999999999988765 358999999999998764322 1111 1111111111 1234
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+.+++|+|+++..++... .....+.+|++.++
T Consensus 219 ~~~~~d~a~~i~~l~~~~-~~~~~G~~~~i~gg 250 (256)
T PRK12745 219 WGEPEDVARAVAALASGD-LPYSTGQAIHVDGG 250 (256)
T ss_pred CcCHHHHHHHHHHHhCCc-ccccCCCEEEECCC
Confidence 678999999988776422 12234789999876
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.9e-15 Score=150.88 Aligned_cols=164 Identities=14% Similarity=0.146 Sum_probs=118.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+||||||+||++++++|+++|. +|+++.|+.... +.+. +.. ..++..+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~~---~~l~-------------~~~--------~~~~~~~ 55 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH---RVVGTVRSEAAR---ADFE-------------ALH--------PDRALAR 55 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC---EEEEEeCCHHHH---HHHH-------------hhc--------CCCeeEE
Confidence 468999999999999999999999985 467888864321 1111 111 2467889
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH---ccC
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK---CVK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~---~~~ 153 (570)
.+|+++ ++....+++ .+|+|||+||..... +.++..+++|+.|+.++++.+.. ..+
T Consensus 56 ~~D~~d-------~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~ 128 (277)
T PRK06180 56 LLDVTD-------FDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR 128 (277)
T ss_pred EccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC
Confidence 999995 333334433 589999999986432 23566689999999999998643 124
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 129 ~~~iv~iSS~~~~~~~--------------------------------------------------------~~~~~Y~~ 152 (277)
T PRK06180 129 RGHIVNITSMGGLITM--------------------------------------------------------PGIGYYCG 152 (277)
T ss_pred CCEEEEEecccccCCC--------------------------------------------------------CCcchhHH
Confidence 5689999997644221 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCC
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
||+..|.+++.. ..+++++++||+.|.++..
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~ 188 (277)
T PRK06180 153 SKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWA 188 (277)
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCcc
Confidence 999999887664 2489999999999987643
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=148.12 Aligned_cols=222 Identities=14% Similarity=0.133 Sum_probs=143.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|||||||||||++++++|++.|++| ++..|+.... .. +. ...+++. ..++..
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v---~~~~~~~~~~-----~~-~~-----~~~~~~~---------~~~~~~ 60 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLV---VVNAKKRAEE-----MN-ET-----LKMVKEN---------GGEGIG 60 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEE---EEEeCCChHH-----HH-HH-----HHHHHHc---------CCeeEE
Confidence 357999999999999999999999998753 4556543211 11 00 0111110 135678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++++.+. +.-
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (252)
T PRK06077 61 VLADVSTR-------EGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG 133 (252)
T ss_pred EEeccCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC
Confidence 88999963 2222332 3689999999964321 124567899999999999988753 233
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||...+... .+.+.|+.|
T Consensus 134 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 157 (252)
T PRK06077 134 GAIVNIASVAGIRPA--------------------------------------------------------YGLSIYGAM 157 (252)
T ss_pred cEEEEEcchhccCCC--------------------------------------------------------CCchHHHHH
Confidence 589999998765321 124679999
Q ss_pred HHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 235 KTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 235 K~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
|+..|.+++.+ ..++.+.+++|+.|.++.......+... . ... ... . . .....+++++|+|+
T Consensus 158 K~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~-~-~~~----~~~-~---~----~~~~~~~~~~dva~ 223 (252)
T PRK06077 158 KAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGM-S-EKE----FAE-K---F----TLMGKILDPEEVAE 223 (252)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccc-c-HHH----HHH-h---c----CcCCCCCCHHHHHH
Confidence 99999988765 3478999999999977543211111000 0 000 000 0 0 11236799999999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++.++... ...+++|++.++
T Consensus 224 ~~~~~~~~~---~~~g~~~~i~~g 244 (252)
T PRK06077 224 FVAAILKIE---SITGQVFVLDSG 244 (252)
T ss_pred HHHHHhCcc---ccCCCeEEecCC
Confidence 999988522 223789999887
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=151.76 Aligned_cols=228 Identities=14% Similarity=0.122 Sum_probs=145.3
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..+++++||||||+|++|.+++++|+++|+. |+++.|+.... +.+. ++.+ ..++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~---V~~~~r~~~~~---~~~~-------------~~~~-------~~~~ 60 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGAR---VHVCDVSEAAL---AATA-------------ARLP-------GAKV 60 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHH-------------HHHh-------cCce
Confidence 3468899999999999999999999999864 57888864321 1111 1111 1257
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
.++.+|++++ +..+.++ .++|+|||+||.... .+.+...+++|+.|+.++++.+...
T Consensus 61 ~~~~~D~~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 133 (264)
T PRK12829 61 TATVADVADP-------AQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLL 133 (264)
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8899999953 3233333 368999999997621 1345677999999999999987431
Q ss_pred --cCc-eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 --VKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 --~~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+. +.++++||....... +..
T Consensus 134 ~~~~~~~~vv~~ss~~~~~~~--------------------------------------------------------~~~ 157 (264)
T PRK12829 134 KASGHGGVIIALSSVAGRLGY--------------------------------------------------------PGR 157 (264)
T ss_pred HhCCCCeEEEEecccccccCC--------------------------------------------------------CCC
Confidence 233 568888775432110 112
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccc-c-cchHHHHHHHhcCCCceeecCCCceee
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVED-L-KTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~-~-~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
..|+.+|+..|.++... ..+++++++||+.++++..+........ . .+.......... .. ....
T Consensus 158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~ 228 (264)
T PRK12829 158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLE----KI-----SLGR 228 (264)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHh----cC-----CCCC
Confidence 46999999999988765 3589999999999988754221100000 0 000011001100 11 1235
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++|+|+++..++... .....+++|+++++
T Consensus 229 ~~~~~d~a~~~~~l~~~~-~~~~~g~~~~i~~g 260 (264)
T PRK12829 229 MVEPEDIAATALFLASPA-ARYITGQAISVDGN 260 (264)
T ss_pred CCCHHHHHHHHHHHcCcc-ccCccCcEEEeCCC
Confidence 899999999988876422 12234789999887
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.4e-15 Score=146.62 Aligned_cols=223 Identities=15% Similarity=0.181 Sum_probs=145.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++|+++|++.|+ +|+++.|+.... +...++ ++ ...++..
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~~~---~~~~~~---------~~----------~~~~~~~ 57 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA---RVVVADRDAEAA---ERVAAA---------IA----------AGGRAFA 57 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC---eEEEecCCHHHH---HHHHHH---------Hh----------cCCeEEE
Confidence 3689999999999999999999999985 457777864321 111111 11 0246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHH----Hc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAK----KC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~----~~ 151 (570)
+.+|+++ .+..+.++ .++|+|||+|+..... +.++..+++|+.|+.++.+.+. +.
T Consensus 58 ~~~D~~~-------~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (252)
T PRK06138 58 RQGDVGS-------AEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ 130 (252)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Confidence 9999995 33333433 3689999999975321 2355668999999988777654 33
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+.++||++||....... ...+.|
T Consensus 131 -~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y 153 (252)
T PRK06138 131 -GGGSIVNTASQLALAGG--------------------------------------------------------RGRAAY 153 (252)
T ss_pred -CCeEEEEECChhhccCC--------------------------------------------------------CCccHH
Confidence 56789999998654321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..+.+++.. ..+++++++||+.+.++.......+... ... +.....+. .....+++++
T Consensus 154 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~---~~~-~~~~~~~~--------~~~~~~~~~~ 221 (252)
T PRK06138 154 VASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHAD---PEA-LREALRAR--------HPMNRFGTAE 221 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccC---hHH-HHHHHHhc--------CCCCCCcCHH
Confidence 99999999988765 3489999999999988754332222111 111 11111111 1112367899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++++.++..... ...+.++.+.++
T Consensus 222 d~a~~~~~l~~~~~~-~~~g~~~~~~~g 248 (252)
T PRK06138 222 EVAQAALFLASDESS-FATGTTLVVDGG 248 (252)
T ss_pred HHHHHHHHHcCchhc-CccCCEEEECCC
Confidence 999999988764322 223667777654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.4e-15 Score=145.18 Aligned_cols=218 Identities=16% Similarity=0.193 Sum_probs=144.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+||||||++|+.+++.|+++|+. |+++.|+.... +.+.++ ++. . ..++.++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~---v~~~~r~~~~~---~~~~~~---------~~~-~--------~~~~~~~ 59 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK---VVIYDSNEEAA---EALAAE---------LRA-A--------GGEARVL 59 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCChhHH---HHHHHH---------HHh-c--------CCceEEE
Confidence 4689999999999999999999999864 57888874321 111111 111 1 2468889
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
.+|++++ ++ ...++ ..+|+|||+||...+. +.++..+++|+.++.++++.+... .+
T Consensus 60 ~~D~~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~ 132 (246)
T PRK05653 60 VFDVSDE------AA-VRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR 132 (246)
T ss_pred EccCCCH------HH-HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999953 22 22333 3579999999886442 235667899999999999888531 25
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.++||++||....... .....|+.
T Consensus 133 ~~~ii~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 156 (246)
T PRK05653 133 YGRIVNISSVSGVTGN--------------------------------------------------------PGQTNYSA 156 (246)
T ss_pred CcEEEEECcHHhccCC--------------------------------------------------------CCCcHhHh
Confidence 6899999987543211 12356999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..|.+++.. ..++.++++||+.+.++...++. ..+....... . ....++.++|+
T Consensus 157 sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~---------~~~~~~~~~~----~-----~~~~~~~~~dv 218 (246)
T PRK05653 157 AKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP---------EEVKAEILKE----I-----PLGRLGQPEEV 218 (246)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh---------HHHHHHHHhc----C-----CCCCCcCHHHH
Confidence 999888877664 35799999999999886442110 0111111111 1 12456788999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++..++.... ....+++|+++++
T Consensus 219 a~~~~~~~~~~~-~~~~g~~~~~~gg 243 (246)
T PRK05653 219 ANAVAFLASDAA-SYITGQVIPVNGG 243 (246)
T ss_pred HHHHHHHcCchh-cCccCCEEEeCCC
Confidence 999988875322 2224789998876
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.6e-15 Score=146.14 Aligned_cols=225 Identities=13% Similarity=0.237 Sum_probs=147.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||+||++++++|++.|.. +.++.|+.... .+.+++ ++. ..++.+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~---v~~~~r~~~~~----~~~~~~---------~~~---------~~~~~~ 59 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAI---PVIFGRSAPDD----EFAEEL---------RAL---------QPRAEF 59 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCc---EEEEcCChhhH----HHHHHH---------Hhc---------CCceEE
Confidence 67899999999999999999999999965 46777765432 111111 111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC---cc---cCHHHHHHHHHHHHHHHHHHHHHc--cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK---FD---ERYDVAFGINTLGAIHLVNFAKKC--VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~---f~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (570)
+.+|++++ ++ .+.++ ..+|+|||+||... ++ +.++..+++|+.++..+.+.+... .+.
T Consensus 60 ~~~D~~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 132 (258)
T PRK08628 60 VQVDLTDD------AQ-CRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASR 132 (258)
T ss_pred EEccCCCH------HH-HHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC
Confidence 99999953 22 23333 36899999999532 22 346677899999999998887642 133
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||....... .....|+.|
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (258)
T PRK08628 133 GAIVNISSKTALTGQ--------------------------------------------------------GGTSGYAAA 156 (258)
T ss_pred cEEEEECCHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 689999997654221 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..++.+..|+|+.|.++... .|...+............ . .+. ...++..+|+|
T Consensus 157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~---~~~~~~~~~~~~~~~~~~-~---~~~----~~~~~~~~dva 225 (258)
T PRK08628 157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYE---NWIATFDDPEAKLAAITA-K---IPL----GHRMTTAEEIA 225 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHH---HHhhhccCHHHHHHHHHh-c---CCc----cccCCCHHHHH
Confidence 99999998865 34799999999999886432 132222211111111111 1 110 01467889999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++..... ...+..+.+.++
T Consensus 226 ~~~~~l~~~~~~-~~~g~~~~~~gg 249 (258)
T PRK08628 226 DTAVFLLSERSS-HTTGQWLFVDGG 249 (258)
T ss_pred HHHHHHhChhhc-cccCceEEecCC
Confidence 999998864322 223667777554
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.8e-15 Score=147.04 Aligned_cols=225 Identities=19% Similarity=0.210 Sum_probs=153.5
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+||||||.+|+.+++.|++.++. |.+++|+.+... .+.++ ...++++.+|+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~---V~~l~R~~~~~~-~~~l~------------------------~~g~~vv~~d~ 52 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFS---VRALVRDPSSDR-AQQLQ------------------------ALGAEVVEADY 52 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGC---EEEEESSSHHHH-HHHHH------------------------HTTTEEEES-T
T ss_pred CEEECCccHHHHHHHHHHHhCCCC---cEEEEeccchhh-hhhhh------------------------cccceEeeccc
Confidence 799999999999999999997754 579999873221 11122 14568889999
Q ss_pred CCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCeec
Q 008315 95 SSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLIL 174 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~i~ 174 (570)
. +.+.+..+++++|+||.+.+... + .-.....+++++|++. ++++||+.|....+....+
T Consensus 53 ~-------~~~~l~~al~g~d~v~~~~~~~~--~-------~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~--- 112 (233)
T PF05368_consen 53 D-------DPESLVAALKGVDAVFSVTPPSH--P-------SELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG--- 112 (233)
T ss_dssp T--------HHHHHHHHTTCSEEEEESSCSC--C-------CHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT---
T ss_pred C-------CHHHHHHHHcCCceEEeecCcch--h-------hhhhhhhhHHHhhhcc-ccceEEEEEeccccccccc---
Confidence 9 45556789999999998888654 1 1233557899999998 7999997665444422110
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC-chHHHHHHHHHHHHHHhcCCCcEEE
Q 008315 175 ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP-NTYVFTKTMGEMIMQQSKENLSLVI 253 (570)
Q Consensus 175 E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-n~Y~~sK~~aE~~v~~~~~~lp~~I 253 (570)
..| ...-..|...|+.+++ .++++++
T Consensus 113 ---------------------------------------------------~~p~~~~~~~k~~ie~~l~~--~~i~~t~ 139 (233)
T PF05368_consen 113 ---------------------------------------------------SEPEIPHFDQKAEIEEYLRE--SGIPYTI 139 (233)
T ss_dssp ---------------------------------------------------STTHHHHHHHHHHHHHHHHH--CTSEBEE
T ss_pred ---------------------------------------------------ccccchhhhhhhhhhhhhhh--cccccee
Confidence 011 2234578888999988 5999999
Q ss_pred EeccccccCCCCCCCCccccccchHHHHHHHhcC-CCceeecCCCceeecc-hHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 254 IRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG-NLPCLVGETKTIMDVI-PVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 254 vRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~~~~d~V-pVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
+||++.+...-.+..++.+ .... ..-.++++++....++ ..+|+++++..++..+... ..+..+.+
T Consensus 140 i~~g~f~e~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~-~~~~~~~~ 207 (233)
T PF05368_consen 140 IRPGFFMENLLPPFAPVVD-----------IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH-NNGKTIFL 207 (233)
T ss_dssp EEE-EEHHHHHTTTHHTTC-----------SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT-TEEEEEEE
T ss_pred ccccchhhhhhhhhccccc-----------ccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh-cCCEEEEe
Confidence 9999876654322222111 0011 1235667777667775 9999999999998864332 12577887
Q ss_pred ccCCCCcccHHhHHHHHhhhcccC
Q 008315 332 GSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 332 ~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++ ..+|+.|+++.+.+.+|+.
T Consensus 208 ~~---~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 208 AG---ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp GG---GEEEHHHHHHHHHHHHTSE
T ss_pred CC---CCCCHHHHHHHHHHHHCCc
Confidence 66 6799999999999998874
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-14 Score=148.89 Aligned_cols=223 Identities=13% Similarity=0.108 Sum_probs=145.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|++| ++..|+..... .+.+.+. ++. . ..++.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V---~i~~~~~~~~~-~~~~~~~---------~~~-~--------~~~~~~ 110 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADI---ALNYLPEEEQD-AAEVVQL---------IQA-E--------GRKAVA 110 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEE---EEEeCCcchHH-HHHHHHH---------HHH-c--------CCeEEE
Confidence 578999999999999999999999999754 44444432211 1111111 111 1 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
+.+|++++ +..+.++ .++|+|||+||... + .+.++..+++|+.|+..+++.+... ..
T Consensus 111 ~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 183 (300)
T PRK06128 111 LPGDLKDE-------AFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP 183 (300)
T ss_pred EecCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc
Confidence 99999953 2223333 36899999999642 1 1356778999999999999999753 22
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+.... ....|+.
T Consensus 184 ~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y~a 207 (300)
T PRK06128 184 GASIINTGSIQSYQPSP--------------------------------------------------------TLLDYAS 207 (300)
T ss_pred CCEEEEECCccccCCCC--------------------------------------------------------CchhHHH
Confidence 35899999987664221 1246999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..++++.+++|+.|.++..... ... ...+..+..+ .....+...+|+
T Consensus 208 sK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~~~-----~~~~~~~~~~---------~p~~r~~~p~dv 271 (300)
T PRK06128 208 TKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--GQP-----PEKIPDFGSE---------TPMKRPGQPVEM 271 (300)
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--CCC-----HHHHHHHhcC---------CCCCCCcCHHHH
Confidence 999999988765 3589999999999988753210 000 1112222211 112235678999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+++..++.... .--.+++|++.++
T Consensus 272 a~~~~~l~s~~~-~~~~G~~~~v~gg 296 (300)
T PRK06128 272 APLYVLLASQES-SYVTGEVFGVTGG 296 (300)
T ss_pred HHHHHHHhCccc-cCccCcEEeeCCC
Confidence 999888765322 1223789999876
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=147.14 Aligned_cols=212 Identities=14% Similarity=0.081 Sum_probs=136.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|.. |++..|+... .+.+.++ ++.. ..++.+
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~---Vv~~~r~~~~---l~~~~~~---------l~~~---------~~~~~~ 59 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGAR---VVLGDVDKPG---LRQAVNH---------LRAE---------GFDVHG 59 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 57999999999999999999999999964 4666665422 1111111 1111 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.+++ .+|+|||+||.... . +.++..+++|+.|+.++++.+.. + .
T Consensus 60 ~~~Dv~d~-------~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~ 132 (275)
T PRK05876 60 VMCDVRHR-------EEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQ 132 (275)
T ss_pred EeCCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 32334333 58999999997432 1 33566789999999999998753 1 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+... .....|
T Consensus 133 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (275)
T PRK05876 133 GTGGHVVFTASFAGLVPN--------------------------------------------------------AGLGAY 156 (275)
T ss_pred CCCCEEEEeCChhhccCC--------------------------------------------------------CCCchH
Confidence 2 3679999997654321 124679
Q ss_pred HHHHHH----HHHHHHHh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTM----GEMIMQQS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~----aE~~v~~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+. +|.+..++ ..++.+++++|+.|.++.......... ............+......++++++
T Consensus 157 ~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (275)
T PRK05876 157 GVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG---------AACAQSSTTGSPGPLPLQDDNLGVD 227 (275)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC---------ccccccccccccccccccccCCCHH
Confidence 999996 66666555 458999999999987753311000000 0000000011223333456789999
Q ss_pred HHHHHHHHHHH
Q 008315 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
|||++++.++.
T Consensus 228 dva~~~~~ai~ 238 (275)
T PRK05876 228 DIAQLTADAIL 238 (275)
T ss_pred HHHHHHHHHHH
Confidence 99999999886
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.1e-14 Score=145.49 Aligned_cols=231 Identities=15% Similarity=0.125 Sum_probs=152.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++++||||||+||+.+++.|++.|. +|+++.|+... .+.+.+++ . ..++.++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~---~v~~~~r~~~~---~~~~~~~~-------------~-------~~~~~~~~ 55 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD---RVLALDIDAAA---LAAFADAL-------------G-------DARFVPVA 55 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHh-------------c-------CCceEEEE
Confidence 57999999999999999999999885 46788886422 11111111 0 14678999
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cCc
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~l 154 (570)
+|+++ .+....+++ ++|+|||+||..... +.+...+.+|+.|+.++++.+.. + .+.
T Consensus 56 ~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 128 (257)
T PRK07074 56 CDLTD-------AASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR 128 (257)
T ss_pred ecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 99995 332333333 489999999975421 22445578999999999988843 2 245
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||....... + ...|+.|
T Consensus 129 ~~iv~~sS~~~~~~~--------------------------------------------------------~-~~~y~~s 151 (257)
T PRK07074 129 GAVVNIGSVNGMAAL--------------------------------------------------------G-HPAYSAA 151 (257)
T ss_pred eEEEEEcchhhcCCC--------------------------------------------------------C-CcccHHH
Confidence 789999996543110 0 1369999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.+ ..+++++++||+.+.++... ........+...... .....++++++|++
T Consensus 152 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~------~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a 216 (257)
T PRK07074 152 KAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE------ARVAANPQVFEELKK---------WYPLQDFATPDDVA 216 (257)
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh------cccccChHHHHHHHh---------cCCCCCCCCHHHHH
Confidence 99999888765 24799999999998775321 100111111111111 11235789999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhh
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFV 350 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~ 350 (570)
++++.++.... ....+.++++.++ ......|+++.+.+
T Consensus 217 ~~~~~l~~~~~-~~~~g~~~~~~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 217 NAVLFLASPAA-RAITGVCLPVDGG--LTAGNREMARTLTL 254 (257)
T ss_pred HHHHHHcCchh-cCcCCcEEEeCCC--cCcCChhhhhhhcc
Confidence 99999885322 2223778888887 67778888877654
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-14 Score=142.85 Aligned_cols=220 Identities=13% Similarity=0.118 Sum_probs=143.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD-TESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~-~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+||||||+||+++++.|+++|++| +++.|... .....+.+.++ ++. ...++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v---~~~~~~~~~~~~~~~~~~~~---------~~~---------~~~~~~ 62 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADV---IVLDIHPMRGRAEADAVAAG---------IEA---------AGGKAL 62 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeE---EEEcCcccccHHHHHHHHHH---------HHh---------cCCcEE
Confidence 467999999999999999999999999754 56555322 22211111111 111 024688
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHH-Hc--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAK-KC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~-~~-- 151 (570)
++.+|++++ +..+.++ ..+|+|||+||.... . +.++..+++|+.|+.++++++. .+
T Consensus 63 ~~~~Dl~~~-------~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 135 (249)
T PRK12827 63 GLAFDVRDF-------AATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR 135 (249)
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 999999953 2223333 368999999997642 1 2356678999999999999997 22
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+.+++|++||...+.... ....
T Consensus 136 ~~~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~ 159 (249)
T PRK12827 136 ARRGGRIVNIASVAGVRGNR--------------------------------------------------------GQVN 159 (249)
T ss_pred cCCCeEEEEECCchhcCCCC--------------------------------------------------------CCch
Confidence 2557899999976653211 2356
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.+|+..+.+++.. ..+++++++||+.|.++...... +...+ .. .. ....+.++
T Consensus 160 y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--------~~~~~---~~----~~-----~~~~~~~~ 219 (249)
T PRK12827 160 YAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA--------PTEHL---LN----PV-----PVQRLGEP 219 (249)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc--------hHHHH---Hh----hC-----CCcCCcCH
Confidence 999999888877654 34899999999999886542110 00000 00 00 11124588
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++|++++.++.... ....++++++.++
T Consensus 220 ~~va~~~~~l~~~~~-~~~~g~~~~~~~g 247 (249)
T PRK12827 220 DEVAALVAFLVSDAA-SYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHHHHHHcCccc-CCccCcEEEeCCC
Confidence 999999888774322 2223678888664
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.5e-15 Score=147.22 Aligned_cols=221 Identities=13% Similarity=0.132 Sum_probs=141.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.-.++||+|+||||+|+||++++++|++.|+. |+++.|+.... +.+. ++ ...+
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~---v~~~~~~~~~~---~~~~-------------~~--------~~~~ 57 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQ---VVLADLDRERG---SKVA-------------KA--------LGEN 57 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCE---EEEEcCCHHHH---HHHH-------------HH--------cCCc
Confidence 34568999999999999999999999999864 45666653211 1111 00 0245
Q ss_pred eEEEEccCCCCCCCCChhhh---HHHHh---CCccEEEEcCccCCcc---------cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 87 ITFVAGDISSEDLGLKDSNL---KEELW---NELDVMVNSAAITKFD---------ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~---~~~l~---~~vdiVih~Aa~v~f~---------~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.++.+|++++ ++. .+.+. ..+|+|||+||..... +.++..+++|+.|+.++++++...
T Consensus 58 ~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (255)
T PRK05717 58 AWFIAMDVADE------AQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPY 131 (255)
T ss_pred eEEEEccCCCH------HHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 78899999953 221 11222 3589999999975321 235677999999999999999642
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||....... ...+
T Consensus 132 ~~~~~g~ii~~sS~~~~~~~--------------------------------------------------------~~~~ 155 (255)
T PRK05717 132 LRAHNGAIVNLASTRARQSE--------------------------------------------------------PDTE 155 (255)
T ss_pred HHHcCcEEEEEcchhhcCCC--------------------------------------------------------CCCc
Confidence 123578999887654221 1235
Q ss_pred hHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 230 TYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.|+.||+..|.+++.. ..++++.+++|+.|.++.... .. ...+ .....+.. ....+..+
T Consensus 156 ~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~--~~------~~~~-~~~~~~~~--------~~~~~~~~ 218 (255)
T PRK05717 156 AYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQ--RR------AEPL-SEADHAQH--------PAGRVGTV 218 (255)
T ss_pred chHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccc--cc------chHH-HHHHhhcC--------CCCCCcCH
Confidence 7999999999888754 446899999999998863211 00 0011 11111111 11235678
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++|.++..++..... .-.+.++.+.++
T Consensus 219 ~~va~~~~~l~~~~~~-~~~g~~~~~~gg 246 (255)
T PRK05717 219 EDVAAMVAWLLSRQAG-FVTGQEFVVDGG 246 (255)
T ss_pred HHHHHHHHHHcCchhc-CccCcEEEECCC
Confidence 9999998877643221 123667777655
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-14 Score=144.31 Aligned_cols=226 Identities=12% Similarity=0.121 Sum_probs=140.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+++||||+|+||++++++|+++|+. |+++.|+... +.+.+++ ... ..++.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~---v~~~~r~~~~----~~~~~~~---------~~~---------~~~~~ 59 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGAR---VVLVDRSELV----HEVAAEL---------RAA---------GGEAL 59 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCchHH----HHHHHHH---------Hhc---------CCeEE
Confidence 368999999999999999999999999964 4677775321 1111111 110 24578
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
++.+|++++ ++ .+.++ ..+|++||+||... + .+.++..+++|+.|+..+++.+.. +
T Consensus 60 ~~~~D~~~~------~~-~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 132 (260)
T PRK12823 60 ALTADLETY------AG-AQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHML 132 (260)
T ss_pred EEEEeCCCH------HH-HHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 899999953 22 22322 36899999998532 1 133566789999998877665543 1
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||...++. ....
T Consensus 133 ~~~~g~iv~~sS~~~~~~----------------------------------------------------------~~~~ 154 (260)
T PRK12823 133 AQGGGAIVNVSSIATRGI----------------------------------------------------------NRVP 154 (260)
T ss_pred hcCCCeEEEEcCccccCC----------------------------------------------------------CCCc
Confidence 24568999999765421 1246
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCC---ccccc-cchHHHHHHHhcCCCceeecCCCceee
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPG---WVEDL-KTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~g---w~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
|+.||+..|.+++.+ ..++++.+++|+.|+++...-... +.+.. .....++.....+.. ..-
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 225 (260)
T PRK12823 155 YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL---------MKR 225 (260)
T ss_pred cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC---------ccc
Confidence 999999999988765 348999999999999863210000 00000 011112211211111 112
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..++|+|++++.++.... ..-.+.++++.++
T Consensus 226 ~~~~~dva~~~~~l~s~~~-~~~~g~~~~v~gg 257 (260)
T PRK12823 226 YGTIDEQVAAILFLASDEA-SYITGTVLPVGGG 257 (260)
T ss_pred CCCHHHHHHHHHHHcCccc-ccccCcEEeecCC
Confidence 3468999999988775321 1123678888765
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.7e-15 Score=144.17 Aligned_cols=209 Identities=12% Similarity=0.156 Sum_probs=141.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||..++++|+++|+ +|+++.|+..... +.+. ++ . ...+..
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~---~v~~~~r~~~~~~--~~~~-~~---------~-----------~~~~~~ 58 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA---RVALIGRGAAPLS--QTLP-GV---------P-----------ADALRI 58 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC---eEEEEeCChHhHH--HHHH-HH---------h-----------hcCceE
Confidence 5789999999999999999999999986 4678888653221 1111 11 0 134567
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+.+ .+..+.++ .++|+|||+|+..... +.++..+++|+.|+.++++++.+. .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (239)
T PRK12828 59 GGIDLVD-------PQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS 131 (239)
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc
Confidence 7899985 22223333 3689999999864321 234566889999999999887532 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||...+.... ....|+
T Consensus 132 ~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~y~ 155 (239)
T PRK12828 132 GGGRIVNIGAGAALKAGP--------------------------------------------------------GMGAYA 155 (239)
T ss_pred CCCEEEEECchHhccCCC--------------------------------------------------------CcchhH
Confidence 578999999987654221 134699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.++... ..++++.++||+.|+++..... .+ ......+++++|
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------------------~~--~~~~~~~~~~~d 209 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------------------MP--DADFSRWVTPEQ 209 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------------------CC--chhhhcCCCHHH
Confidence 9999888877654 3589999999999988632110 00 001122789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++..... .-.++.+++.++
T Consensus 210 va~~~~~~l~~~~~-~~~g~~~~~~g~ 235 (239)
T PRK12828 210 IAAVIAFLLSDEAQ-AITGASIPVDGG 235 (239)
T ss_pred HHHHHHHHhCcccc-cccceEEEecCC
Confidence 99999888763321 123678888765
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-14 Score=142.92 Aligned_cols=220 Identities=16% Similarity=0.194 Sum_probs=141.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||++|++++++|++.|+. |+++.|+.... .+.+.+ .++.. ..++.+
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~---v~~~~~~~~~~--~~~~~~---------~~~~~---------~~~~~~ 59 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGAN---VVINYASSEAG--AEALVA---------EIGAL---------GGKALA 59 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCchhH--HHHHHH---------HHHhc---------CCceEE
Confidence 36799999999999999999999999864 46777754321 111111 11111 256888
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ +....++ .++|+|||+||..... +.+...+++|+.++.++++.+... .
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 132 (248)
T PRK05557 60 VQGDVSDA-------ESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ 132 (248)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 2222333 3689999999975422 235567889999999999988653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.++||++||....... .....|+
T Consensus 133 ~~~~~v~iss~~~~~~~--------------------------------------------------------~~~~~y~ 156 (248)
T PRK05557 133 RSGRIINISSVVGLMGN--------------------------------------------------------PGQANYA 156 (248)
T ss_pred CCeEEEEEcccccCcCC--------------------------------------------------------CCCchhH
Confidence 45689999987433211 1135699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..+++++++||+.+.++...+.. ..+......+. ....+++++|
T Consensus 157 ~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~ 218 (248)
T PRK05557 157 ASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP---------EDVKEAILAQI---------PLGRLGQPEE 218 (248)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC---------hHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999888777654 35799999999988654332210 11111111111 1123568899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++... .....+++|++.++
T Consensus 219 va~~~~~l~~~~-~~~~~g~~~~i~~~ 244 (248)
T PRK05557 219 IASAVAFLASDE-AAYITGQTLHVNGG 244 (248)
T ss_pred HHHHHHHHcCcc-cCCccccEEEecCC
Confidence 999988776531 12234788998765
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=144.79 Aligned_cols=229 Identities=16% Similarity=0.191 Sum_probs=145.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
|+++|+||||||||+||++++++|+++|+ +|+++.|+... .+.+.+++ +.. ..++.
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~ 57 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGA---DVVLAARTAER---LDEVAAEI---------DDL---------GRRAL 57 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHHH---------HHh---------CCceE
Confidence 56789999999999999999999999996 45677776422 12222111 110 24678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
.+.+|++++ +..+.++ .++|+|||+|+...- .+.++..+++|+.|+..+++.+...
T Consensus 58 ~~~~D~~~~-------~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 130 (258)
T PRK07890 58 AVPTDITDE-------DQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALA 130 (258)
T ss_pred EEecCCCCH-------HHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 999999953 2222332 468999999986421 1345677999999999999998753
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+...+||++||....... ...+.|
T Consensus 131 ~~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y 154 (258)
T PRK07890 131 ESGGSIVMINSMVLRHSQ--------------------------------------------------------PKYGAY 154 (258)
T ss_pred hCCCEEEEEechhhccCC--------------------------------------------------------CCcchh
Confidence 122589999997653221 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccc--hHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKT--INALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~--~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.+|+..|.+++.+ ..++++.++||+.|+++...+.-.+...-.+ ...+....... .....+..
T Consensus 155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 225 (258)
T PRK07890 155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPT 225 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCC
Confidence 99999999988875 2479999999999998743211000000000 01111111111 11224678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++..... .-.++++.+.++
T Consensus 226 ~~dva~a~~~l~~~~~~-~~~G~~i~~~gg 254 (258)
T PRK07890 226 DDEVASAVLFLASDLAR-AITGQTLDVNCG 254 (258)
T ss_pred HHHHHHHHHHHcCHhhh-CccCcEEEeCCc
Confidence 89999999887753321 223566666554
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=144.46 Aligned_cols=222 Identities=15% Similarity=0.139 Sum_probs=144.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++||||||||++|+++++.|++.|++ |+++.|+..... .+. +.+.. ..++.+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~---V~~~~r~~~~~~---~~~---------~~~~~----------~~~~~~ 57 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGAR---VVVTDRNEEAAE---RVA---------AEILA----------GGRAIA 57 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHHHH---HHH---------HHHhc----------CCeEEE
Confidence 47899999999999999999999999864 678888753221 111 11111 145789
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+|+..... +.++..+++|+.|+..+++.+...
T Consensus 58 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 130 (251)
T PRK07231 58 VAADVSD-------EADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRG 130 (251)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 9999995 333334433 579999999974321 335677999999988888877642
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+.++||++||...+.... ..+.|
T Consensus 131 ~~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~y 154 (251)
T PRK07231 131 EGGGAIVNVASTAGLRPRP--------------------------------------------------------GLGWY 154 (251)
T ss_pred cCCcEEEEEcChhhcCCCC--------------------------------------------------------CchHH
Confidence 2567899999987764321 23569
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..+++++.++|+.+.++..... ... . ..........+ .....+++++
T Consensus 155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~-~-~~~~~~~~~~~---------~~~~~~~~~~ 220 (251)
T PRK07231 155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF---MGE-P-TPENRAKFLAT---------IPLGRLGTPE 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh---hcc-c-ChHHHHHHhcC---------CCCCCCcCHH
Confidence 99998888777654 2389999999999966543211 110 0 00111111111 1123468999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|.+++.++..... ...+.++.+.++
T Consensus 221 dva~~~~~l~~~~~~-~~~g~~~~~~gg 247 (251)
T PRK07231 221 DIANAALFLASDEAS-WITGVTLVVDGG 247 (251)
T ss_pred HHHHHHHHHhCcccc-CCCCCeEEECCC
Confidence 999999998853322 223667777655
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-14 Score=142.87 Aligned_cols=228 Identities=16% Similarity=0.184 Sum_probs=141.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++++|+|+||||||+||++++++|++.|+. |+++.|+.... +.+. +.++...+ ...+.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~---v~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~ 58 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGI---VIAADIDKEAL---NELL---------ESLGKEFK-------SKKLS 58 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEecChHHH---HHHH---------HHHHhhcC-------CCcee
Confidence 357899999999999999999999999964 46677754321 1111 11221111 23567
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC------cc----cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK------FD----ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~------f~----~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++.+|++++ +..+.+++ .+|+|||+|+... +. +.+...+++|+.++..+++.+...
T Consensus 59 ~~~~Dl~d~-------~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (256)
T PRK09186 59 LVELDITDQ-------ESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKY 131 (256)
T ss_pred EEEecCCCH-------HHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 789999963 22334433 3899999997532 11 235667889998888777766442
Q ss_pred ---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 ---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+..++|++||.+........ .+.+ .+. ..+
T Consensus 132 ~~~~~~~~iv~~sS~~~~~~~~~~----~~~~-~~~-----------------------------------------~~~ 165 (256)
T PRK09186 132 FKKQGGGNLVNISSIYGVVAPKFE----IYEG-TSM-----------------------------------------TSP 165 (256)
T ss_pred HHhcCCceEEEEechhhhccccch----hccc-ccc-----------------------------------------CCc
Confidence 255799999997654322100 0100 000 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..|.+.+.. ..++.+++++|+.+..... ..+...... . . ....++
T Consensus 166 ~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------------~~~~~~~~~-~---~-----~~~~~~ 223 (256)
T PRK09186 166 VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------------EAFLNAYKK-C---C-----NGKGML 223 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------------HHHHHHHHh-c---C-----CccCCC
Confidence 47999999999987643 4579999999998765321 011111111 1 0 112468
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++|+|++++.++..... ...+.++++.++
T Consensus 224 ~~~dva~~~~~l~~~~~~-~~~g~~~~~~~g 253 (256)
T PRK09186 224 DPDDICGTLVFLLSDQSK-YITGQNIIVDDG 253 (256)
T ss_pred CHHHhhhhHhheeccccc-cccCceEEecCC
Confidence 999999999998863322 223677777665
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-14 Score=140.93 Aligned_cols=202 Identities=15% Similarity=0.179 Sum_probs=131.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+||||||||++|++++++|+++ ++ |+++.|+... .+.+. ++ ...++++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~---V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~~ 53 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HT---LLLGGRPAER---LDELA-------------AE---------LPGATPFP 53 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CC---EEEEeCCHHH---HHHHH-------------HH---------hccceEEe
Confidence 479999999999999999999987 54 5788886422 11111 00 13478899
Q ss_pred ccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHH----HHHHccCceEE
Q 008315 92 GDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVN----FAKKCVKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~----~a~~~~~lk~f 157 (570)
+|+++ .+..+.+++ ++|+|||+|+..... +.+...+++|+.+..++.+ .+++ +.+++
T Consensus 54 ~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ 124 (227)
T PRK08219 54 VDLTD-------PEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA--AHGHV 124 (227)
T ss_pred cCCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCeE
Confidence 99995 333445555 599999999975421 2355668899999555444 4443 34689
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||...+.... ....|+.+|+.
T Consensus 125 v~~ss~~~~~~~~--------------------------------------------------------~~~~y~~~K~a 148 (227)
T PRK08219 125 VFINSGAGLRANP--------------------------------------------------------GWGSYAASKFA 148 (227)
T ss_pred EEEcchHhcCcCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999887653221 23569999999
Q ss_pred HHHHHHHh---cCC-CcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 238 GEMIMQQS---KEN-LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 238 aE~~v~~~---~~~-lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
.|.++... ..+ +++..++|+.+.++... .+... .+. ......+++++|+|++++
T Consensus 149 ~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------------~~~~~--~~~-------~~~~~~~~~~~dva~~~~ 206 (227)
T PRK08219 149 LRALADALREEEPGNVRVTSVHPGRTDTDMQR-------------GLVAQ--EGG-------EYDPERYLRPETVAKAVR 206 (227)
T ss_pred HHHHHHHHHHHhcCCceEEEEecCCccchHhh-------------hhhhh--hcc-------ccCCCCCCCHHHHHHHHH
Confidence 89877654 234 88888888876543110 00000 010 011235799999999999
Q ss_pred HHHHHhcCCCCCCceEEecc
Q 008315 314 VAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s 333 (570)
.++.. +..+.+|++.-
T Consensus 207 ~~l~~----~~~~~~~~~~~ 222 (227)
T PRK08219 207 FAVDA----PPDAHITEVVV 222 (227)
T ss_pred HHHcC----CCCCccceEEE
Confidence 98852 22356777654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=146.37 Aligned_cols=218 Identities=14% Similarity=0.128 Sum_probs=139.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|||||||||||++++++|+++|+. |+++.|.... .++..+++ ... ..++.+
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 59 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMK---LVLADVQQDA---LDRAVAEL---------RAQ---------GAEVLG 59 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE---EEEEeCChHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 46899999999999999999999999864 5677775321 12221111 100 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH----c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK----C 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~----~ 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++.. .
T Consensus 60 ~~~D~~d-------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 60 VRTDVSD-------AAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 9999995 333334444 589999999986431 33556689999999998777532 2
Q ss_pred cC-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 152 VK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 152 ~~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
.. ..++|++||...+... .
T Consensus 133 ~~~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~ 156 (287)
T PRK06194 133 AEKDPAYEGHIVNTASMAGLLAP--------------------------------------------------------P 156 (287)
T ss_pred CCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------C
Confidence 11 1589999998765422 1
Q ss_pred CCchHHHHHHHHHHHHHHhc-------CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCce
Q 008315 227 WPNTYVFTKTMGEMIMQQSK-------ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI 299 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~~-------~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
..+.|+.||+..|.+++.+. .++.+..+.|+.|...... ...+....+.+++...
T Consensus 157 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~------------------~~~~~~~~~~~~~~~~ 218 (287)
T PRK06194 157 AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ------------------SERNRPADLANTAPPT 218 (287)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc------------------ccccCchhcccCcccc
Confidence 23579999999999987652 2355666666655433211 1111222344556677
Q ss_pred eecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
.+++++++++.++... ..++..|+++.+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~---------------------~~~s~~dva~~i~~~~~ 251 (287)
T PRK06194 219 RSQLIAQAMSQKAVGS---------------------GKVTAEEVAQLVFDAIR 251 (287)
T ss_pred chhhHHHHHHHhhhhc---------------------cCCCHHHHHHHHHHHHH
Confidence 7788888776654211 01567777777776554
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=146.38 Aligned_cols=159 Identities=18% Similarity=0.217 Sum_probs=113.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||||+||++++++|++.|+. |+++.|+.+. +. ++. ..++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~---V~~~~r~~~~------l~-~~~--------------------~~~~~~~ 51 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYT---VYGAARRVDK------ME-DLA--------------------SLGVHPL 51 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH------HH-HHH--------------------hCCCeEE
Confidence 5799999999999999999999999864 5778886421 11 110 1347889
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHH----HHHHcc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVN----FAKKCV 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~----~a~~~~ 152 (570)
.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+..+++ .+++.
T Consensus 52 ~~Dv~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~- 123 (273)
T PRK06182 52 SLDVTD-------EASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ- 123 (273)
T ss_pred EeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-
Confidence 999995 333334443 689999999975432 3456778999999655555 44443
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (273)
T PRK06182 124 RSGRIINISSMGGKIYT--------------------------------------------------------PLGAWYH 147 (273)
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCccHhH
Confidence 55789999996542211 1234699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.||+..+.+.+.. ..+++++++||+.|.++.
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 9999999986543 458999999999997754
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-14 Score=143.04 Aligned_cols=216 Identities=15% Similarity=0.160 Sum_probs=144.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||+|++|+++++.|++.|+ +|+++.|+... .+.+. +. .+..+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~---~V~~~~r~~~~---~~~~~-------------~~----------~~~~~ 57 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA---RVVAAARNAAA---LDRLA-------------GE----------TGCEP 57 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH----------hCCeE
Confidence 5789999999999999999999999986 45778886421 11111 00 13467
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHcc---C-ce
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCV---K-LK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~---~-lk 155 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++.+.+.. + ..
T Consensus 58 ~~~D~~~-------~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 130 (245)
T PRK07060 58 LRLDVGD-------DAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGG 130 (245)
T ss_pred EEecCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCc
Confidence 8899985 332334443 589999999975432 2356668899999999999886531 1 36
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||...+... .....|+.||
T Consensus 131 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 154 (245)
T PRK07060 131 SIVNVSSQAALVGL--------------------------------------------------------PDHLAYCASK 154 (245)
T ss_pred EEEEEccHHHcCCC--------------------------------------------------------CCCcHhHHHH
Confidence 89999997655321 1235799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+.+|.+++.+ ..+++++.+||+.+.++.... -|.+ .. ....+... .....+++++|+|+
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~--~~~~----~~-~~~~~~~~---------~~~~~~~~~~d~a~ 218 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAE--AWSD----PQ-KSGPMLAA---------IPLGRFAEVDDVAA 218 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhh--hccC----HH-HHHHHHhc---------CCCCCCCCHHHHHH
Confidence 9999988765 347999999999998865321 1211 00 01111110 11234789999999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++..++.... ....++++++.++
T Consensus 219 ~~~~l~~~~~-~~~~G~~~~~~~g 241 (245)
T PRK07060 219 PILFLLSDAA-SMVSGVSLPVDGG 241 (245)
T ss_pred HHHHHcCccc-CCccCcEEeECCC
Confidence 9988876432 2234788888765
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.7e-14 Score=140.83 Aligned_cols=220 Identities=16% Similarity=0.150 Sum_probs=136.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++++||||||+||++++++|+++|+.| .+..|.... ..+.+. +.++.. ..++.++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~v---v~~~~~~~~--~~~~~~---------~~l~~~---------~~~~~~~~ 58 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAV---CLNYLRNRD--AAEAVV---------QAIRRQ---------GGEALAVA 58 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeE---EEecCCCHH--HHHHHH---------HHHHhC---------CCcEEEEE
Confidence 4789999999999999999999998654 333333211 111111 111110 14577899
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc-c-C-
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC-V-K- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~-~-~- 153 (570)
+|+++ .+..+.+++ .+|+|||+|+.... . +.++..+++|+.|+..+++.+.+. . +
T Consensus 59 ~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 131 (248)
T PRK06123 59 ADVAD-------EADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRH 131 (248)
T ss_pred eccCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99995 332334333 68999999997531 1 235577999999999998887542 1 1
Q ss_pred ---ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 154 ---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 154 ---lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
-.++|++||........ .....
T Consensus 132 ~~~~g~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~ 156 (248)
T PRK06123 132 GGRGGAIVNVSSMAARLGSP-------------------------------------------------------GEYID 156 (248)
T ss_pred CCCCeEEEEECchhhcCCCC-------------------------------------------------------CCccc
Confidence 13699999975432110 01235
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.. ..+++++++||+.|+++..... .....+.... +..+ ..-...+
T Consensus 157 Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--------~~~~~~~~~~-~~~p--------~~~~~~~ 219 (248)
T PRK06123 157 YAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--------GEPGRVDRVK-AGIP--------MGRGGTA 219 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--------CCHHHHHHHH-hcCC--------CCCCcCH
Confidence 999999999987654 3479999999999998743210 0111111111 1111 0012367
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++++.++.... ....+++|++.++
T Consensus 220 ~d~a~~~~~l~~~~~-~~~~g~~~~~~gg 247 (248)
T PRK06123 220 EEVARAILWLLSDEA-SYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHHHHHHhCccc-cCccCCEEeecCC
Confidence 999999998775322 1224788988764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=6e-14 Score=138.72 Aligned_cols=196 Identities=14% Similarity=0.216 Sum_probs=134.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||++++++|++.|. +|.++.|+... .+.+.++ +.. . ..++.+
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~---~Vi~~~r~~~~---~~~~~~~---------~~~-~--------~~~~~~ 60 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGV---NVGLLARTEEN---LKAVAEE---------VEA-Y--------GVKVVI 60 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHH-h--------CCeEEE
Confidence 4679999999999999999999999885 45778886432 1111111 111 1 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+|+..... +.++..+++|+.|+.++++.+... .
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (239)
T PRK07666 61 ATADVSDY-------EEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER 133 (239)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 99999953 3223433 3699999999875321 335677899999999999887642 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+.+++|++||...+... ...+.|+
T Consensus 134 ~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 157 (239)
T PRK07666 134 QSGDIINISSTAGQKGA--------------------------------------------------------AVTSAYS 157 (239)
T ss_pred CCcEEEEEcchhhccCC--------------------------------------------------------CCCcchH
Confidence 45789999997654321 1235699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.++... ..+++++++||+.|.++...... ... ++ ...+++.++
T Consensus 158 ~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~---------------~~~-------~~---~~~~~~~~~ 212 (239)
T PRK07666 158 ASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLG---------------LTD-------GN---PDKVMQPED 212 (239)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcc---------------ccc-------cC---CCCCCCHHH
Confidence 9999888887653 35899999999998776432110 000 01 123578999
Q ss_pred HHHHHHHHHH
Q 008315 308 VVNAMIVAMV 317 (570)
Q Consensus 308 va~aii~a~~ 317 (570)
+|++++.++.
T Consensus 213 ~a~~~~~~l~ 222 (239)
T PRK07666 213 LAEFIVAQLK 222 (239)
T ss_pred HHHHHHHHHh
Confidence 9999999886
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.1e-14 Score=143.50 Aligned_cols=159 Identities=14% Similarity=0.210 Sum_probs=118.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||||||+||++++++|+++|+. |+++.|+...... ..+++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~---V~~~~r~~~~~~~-----------------------------~~~~~~~ 50 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR---VFGTSRNPARAAP-----------------------------IPGVELL 50 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCChhhccc-----------------------------cCCCeeE
Confidence 4689999999999999999999999864 5788886432110 2467889
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cC
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (570)
.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++.+.. + .+
T Consensus 51 ~~D~~d-------~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 123 (270)
T PRK06179 51 ELDVTD-------DASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG 123 (270)
T ss_pred EeecCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 999995 333334443 479999999975432 23567799999999999988633 1 26
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.+++|++||...+... .....|+.
T Consensus 124 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 147 (270)
T PRK06179 124 SGRIINISSVLGFLPA--------------------------------------------------------PYMALYAA 147 (270)
T ss_pred CceEEEECCccccCCC--------------------------------------------------------CCccHHHH
Confidence 7899999997654321 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCC
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
||+..|.+++.. ..++++++++|+.+.++..
T Consensus 148 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 148 SKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 999999887764 4589999999999987654
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.4e-14 Score=138.89 Aligned_cols=160 Identities=15% Similarity=0.223 Sum_probs=118.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||+++++.|+++|. .+|+++.|+.+.... ...++.+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~----------------------------~~~~~~~ 53 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGA--AKVYAAARDPESVTD----------------------------LGPRVVP 53 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCc--ccEEEEecChhhhhh----------------------------cCCceEE
Confidence 4679999999999999999999999986 245788886432110 0256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCcc-CCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---cCce
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAI-TKF-------DERYDVAFGINTLGAIHLVNFAKKC---VKLK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~-v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk 155 (570)
+.+|+++ .+..+.+++ .+|+|||+||. ... .+.+...+++|+.++..+++++.+. .+..
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 126 (238)
T PRK08264 54 LQLDVTD-------PASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGG 126 (238)
T ss_pred EEecCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 9999995 332334444 58999999997 221 1345667899999999999987642 2456
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||...+... ...+.|+.||
T Consensus 127 ~~v~~sS~~~~~~~--------------------------------------------------------~~~~~y~~sK 150 (238)
T PRK08264 127 AIVNVLSVLSWVNF--------------------------------------------------------PNLGTYSASK 150 (238)
T ss_pred EEEEEcChhhccCC--------------------------------------------------------CCchHhHHHH
Confidence 89999997764321 1246799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.+|.+.... ..+++++++||+.+.++
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 9999888764 34899999999988664
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.4e-14 Score=139.37 Aligned_cols=202 Identities=18% Similarity=0.260 Sum_probs=134.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||+|++|.+++++|++.|+ +|.++.|+.... +.+.++ ++.. ..++.++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~---~Vi~~~r~~~~~---~~~~~~---------l~~~---------~~~~~~~~ 56 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA---QLVLAARNETRL---ASLAQE---------LADH---------GGEALVVP 56 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHhc---------CCcEEEEE
Confidence 47899999999999999999999886 456777764221 111111 1111 24678899
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc---c-----CHHHHHHHHHHHHHHHHHHHHHc--cCc
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD---E-----RYDVAFGINTLGAIHLVNFAKKC--VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~---~-----~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (570)
+|+++ .+..+.+++ ++|+|||+||..... + .+...+++|+.|+.++++.+... .+.
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 129 (263)
T PRK06181 57 TDVSD-------AEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR 129 (263)
T ss_pred ccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99995 332333333 689999999975432 2 14566899999999999988542 244
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+... .....|+.|
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 153 (263)
T PRK06181 130 GQIVVVSSLAGLTGV--------------------------------------------------------PTRSGYAAS 153 (263)
T ss_pred CEEEEEecccccCCC--------------------------------------------------------CCccHHHHH
Confidence 689999987665321 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+.+.. ..++++++++|+.|.++....... . .|.. ....+....++++++|+|
T Consensus 154 K~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---~------------~~~~--~~~~~~~~~~~~~~~dva 216 (263)
T PRK06181 154 KHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---G------------DGKP--LGKSPMQESKIMSAEECA 216 (263)
T ss_pred HHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---c------------cccc--cccccccccCCCCHHHHH
Confidence 99999988654 358999999999887654321000 0 0110 001111223789999999
Q ss_pred HHHHHHHH
Q 008315 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 217 ~~i~~~~~ 224 (263)
T PRK06181 217 EAILPAIA 224 (263)
T ss_pred HHHHHHhh
Confidence 99998885
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.6e-14 Score=144.09 Aligned_cols=222 Identities=13% Similarity=0.138 Sum_probs=146.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+||||||+|+||.+++++|++.|.. |++..|+.... .+.+.+. ++ .. ..++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~---V~l~~r~~~~~--~~~~~~~---------~~-~~--------~~~~~ 99 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGAD---IAIVYLDEHED--ANETKQR---------VE-KE--------GVKCL 99 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchH--HHHHHHH---------HH-hc--------CCeEE
Confidence 457899999999999999999999999864 46667754221 1111111 11 00 14678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc-c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC-V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (570)
++.+|+++ .+..+.++ .++|+|||+|+.... . +.+...+++|+.|+.++++++... .
T Consensus 100 ~~~~Dl~~-------~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 172 (290)
T PRK06701 100 LIPGDVSD-------EAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK 172 (290)
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 89999995 33233333 358999999996422 1 235667999999999999998763 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
...++|++||...+.... ....|+
T Consensus 173 ~~g~iV~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 196 (290)
T PRK06701 173 QGSAIINTGSITGYEGNE--------------------------------------------------------TLIDYS 196 (290)
T ss_pred hCCeEEEEecccccCCCC--------------------------------------------------------CcchhH
Confidence 335899999987654321 124699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..+++++.++|+.|..+... ... . ...+..+.. ......+..++|
T Consensus 197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~---~~~---~--~~~~~~~~~---------~~~~~~~~~~~d 259 (290)
T PRK06701 197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIP---SDF---D--EEKVSQFGS---------NTPMQRPGQPEE 259 (290)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccc---ccc---C--HHHHHHHHh---------cCCcCCCcCHHH
Confidence 9999999888765 24899999999999876431 100 0 111111111 112345688899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.+.++++.++
T Consensus 260 va~~~~~ll~~~~~-~~~G~~i~idgg 285 (290)
T PRK06701 260 LAPAYVFLASPDSS-YITGQMLHVNGG 285 (290)
T ss_pred HHHHHHHHcCcccC-CccCcEEEeCCC
Confidence 99999988764322 223678888765
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.7e-14 Score=142.01 Aligned_cols=228 Identities=11% Similarity=0.065 Sum_probs=141.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||+|+||+++++.|++.|+. |+++.|+.... +.+. +.++...+ ..++.++.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~---vi~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~~~ 59 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR---VAVADINSEKA---ANVA---------QEINAEYG-------EGMAYGFG 59 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHH---------HHHHHhcC-------CceeEEEE
Confidence 689999999999999999999998864 56777764321 1111 11111111 13588999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHHc---cC-
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKKC---VK- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (570)
+|++++ +..+.++ ..+|+|||+||.... . +.++..+++|+.|+..+++.+... .+
T Consensus 60 ~D~~~~-------~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 132 (259)
T PRK12384 60 ADATSE-------QSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI 132 (259)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC
Confidence 999952 2222333 358999999986532 1 335677899999999888877542 23
Q ss_pred ceEEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 154 LKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 154 lk~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
-.++|++||... ++. .....|+
T Consensus 133 ~~~iv~~ss~~~~~~~---------------------------------------------------------~~~~~Y~ 155 (259)
T PRK12384 133 QGRIIQINSKSGKVGS---------------------------------------------------------KHNSGYS 155 (259)
T ss_pred CcEEEEecCcccccCC---------------------------------------------------------CCCchhH
Confidence 358999988542 111 1135799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhc--CCCceeecCCCceeecchH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ--GNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~--G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+++.+ ..++++.++||+.++++... .+.+. .+...... +.......+......+++.
T Consensus 156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (259)
T PRK12384 156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF--QSLLP------QYAKKLGIKPDEVEQYYIDKVPLKRGCDY 227 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh--hhhhH------HHHHhcCCChHHHHHHHHHhCcccCCCCH
Confidence 9999988887654 46899999999988765321 01000 00000000 0000011122334567889
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++++.++.... ....+++|++.++
T Consensus 228 ~dv~~~~~~l~~~~~-~~~~G~~~~v~~g 255 (259)
T PRK12384 228 QDVLNMLLFYASPKA-SYCTGQSINVTGG 255 (259)
T ss_pred HHHHHHHHHHcCccc-ccccCceEEEcCC
Confidence 999999988765322 1224789999886
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-13 Score=137.32 Aligned_cols=215 Identities=12% Similarity=0.110 Sum_probs=137.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|++|||||+|+||++++++|++.|.. ++++.|..... .+.+.++ ++.. ..++.++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~---v~~~~~~~~~~--~~~~~~~---------~~~~---------~~~~~~~ 64 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD---VAVHYNRSRDE--AEALAAE---------IRAL---------GRRAVAL 64 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHHH--HHHHHHH---------HHhc---------CCeEEEE
Confidence 5789999999999999999999998864 45655543211 1111111 1110 2468889
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c--C
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V--K 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~--~ 153 (570)
.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+... . .
T Consensus 65 ~~Dl~d~-------~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (258)
T PRK09134 65 QADLADE-------AEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA 137 (258)
T ss_pred EcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999953 2223333 358999999986432 1345677999999999999988653 1 2
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 138 ~~~iv~~~s~~~~~~~--------------------------------------------------------p~~~~Y~~ 161 (258)
T PRK09134 138 RGLVVNMIDQRVWNLN--------------------------------------------------------PDFLSYTL 161 (258)
T ss_pred CceEEEECchhhcCCC--------------------------------------------------------CCchHHHH
Confidence 2467777765432211 01247999
Q ss_pred HHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 234 TKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 234 sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
||+..|.+.+.+ ..++.++.++|+.+....... ... +.....+.. ......++|+|
T Consensus 162 sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~----------~~~-~~~~~~~~~---------~~~~~~~~d~a 221 (258)
T PRK09134 162 SKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS----------PED-FARQHAATP---------LGRGSTPEEIA 221 (258)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC----------hHH-HHHHHhcCC---------CCCCcCHHHHH
Confidence 999999888765 235899999999886542210 011 111111110 11236789999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++... ...+++|++.++
T Consensus 222 ~~~~~~~~~~---~~~g~~~~i~gg 243 (258)
T PRK09134 222 AAVRYLLDAP---SVTGQMIAVDGG 243 (258)
T ss_pred HHHHHHhcCC---CcCCCEEEECCC
Confidence 9999988632 223678888877
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1e-13 Score=137.66 Aligned_cols=220 Identities=16% Similarity=0.186 Sum_probs=144.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.|++ |+++.|+.... +.+.++ ++.. ..++.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~---v~~~~r~~~~~---~~~~~~---------~~~~---------~~~~~~ 60 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGAT---VAFNDGLAAEA---RELAAA---------LEAA---------GGRAHA 60 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHHHH---------HHhc---------CCcEEE
Confidence 57899999999999999999999999864 46666653221 111111 1110 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 61 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 133 (250)
T PRK12939 61 IAADLAD-------PASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS 133 (250)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 33233333 468999999997532 1345667899999999999988652 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.+||++||........ ....|+
T Consensus 134 ~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~y~ 157 (250)
T PRK12939 134 GRGRIVNLASDTALWGAP--------------------------------------------------------KLGAYV 157 (250)
T ss_pred CCeEEEEECchhhccCCC--------------------------------------------------------CcchHH
Confidence 235899999966542211 134699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.. ..++.+.+++|+.|.++.....+. .........+ .....+++++|
T Consensus 158 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~---------~~~~~~~~~~d 220 (250)
T PRK12939 158 ASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--------DERHAYYLKG---------RALERLQVPDD 220 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--------hHHHHHHHhc---------CCCCCCCCHHH
Confidence 9999999988764 357999999999887654321110 0111111111 12234688999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ..-.++++++.++
T Consensus 221 va~~~~~l~~~~~-~~~~G~~i~~~gg 246 (250)
T PRK12939 221 VAGAVLFLLSDAA-RFVTGQLLPVNGG 246 (250)
T ss_pred HHHHHHHHhCccc-cCccCcEEEECCC
Confidence 9999999885332 1224678888775
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-13 Score=138.43 Aligned_cols=227 Identities=14% Similarity=0.174 Sum_probs=140.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-DTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+||||+|+||.+++++|++.|+.| +++.|.. ......+++.+++ +.. ..++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~v---v~i~~~~~~~~~~~~~~~~~l---------~~~---------~~~~~ 64 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKA---VAIHYNSAASKADAEETVAAV---------KAA---------GAKAV 64 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcE---EEEecCCccchHHHHHHHHHH---------HHh---------CCcEE
Confidence 578999999999999999999999998753 4554432 2222222222111 110 14678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-ccC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CVK 153 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~~ 153 (570)
.+.+|++++ ++ .+.++ ..+|++||+||..... +.++..+++|+.|+..+++.+.. +..
T Consensus 65 ~~~~D~~~~------~~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~ 137 (257)
T PRK12744 65 AFQADLTTA------AA-VEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND 137 (257)
T ss_pred EEecCcCCH------HH-HHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc
Confidence 899999953 22 33333 3689999999974321 23567789999999999998865 322
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++++++|..+.... .....|+.
T Consensus 138 ~~~iv~~~ss~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (257)
T PRK12744 138 NGKIVTLVTSLLGAFT--------------------------------------------------------PFYSAYAG 161 (257)
T ss_pred CCCEEEEecchhcccC--------------------------------------------------------CCcccchh
Confidence 2456666433322111 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.. ..++++++++|+.|.++...+..+ .... ..... .....+.....+.+++|+
T Consensus 162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~--~~~~~---~~~~~~~~~~~~~~~~dv 229 (257)
T PRK12744 162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-------AEAV--AYHKT---AAALSPFSKTGLTDIEDI 229 (257)
T ss_pred hHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-------cchh--hcccc---cccccccccCCCCCHHHH
Confidence 999999998775 237999999999997754322111 0000 00000 000111112247789999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+++..++.. ...-.++++++.++
T Consensus 230 a~~~~~l~~~--~~~~~g~~~~~~gg 253 (257)
T PRK12744 230 VPFIRFLVTD--GWWITGQTILINGG 253 (257)
T ss_pred HHHHHHhhcc--cceeecceEeecCC
Confidence 9999988862 11123678888775
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-13 Score=135.93 Aligned_cols=223 Identities=16% Similarity=0.107 Sum_probs=140.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||.++++.|++.|+. |+++.|+... .+.+.++ ++. . ..++.+
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~---V~~~~r~~~~---~~~~~~~---------i~~-~--------~~~~~~ 65 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGAR---VVLSARKAEE---LEEAAAH---------LEA-L--------GIDALW 65 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHH---------HHh-c--------CCeEEE
Confidence 37899999999999999999999999864 5777775422 1111111 111 0 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 66 ~~~Dl~d~-------~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~ 138 (259)
T PRK08213 66 IAADVADE-------ADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIP 138 (259)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHh
Confidence 99999953 2222222 358999999996421 1335667899999999999987653
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++..+||++||........+. + .....|
T Consensus 139 ~~~~~~v~~sS~~~~~~~~~~-----~-----------------------------------------------~~~~~Y 166 (259)
T PRK08213 139 RGYGRIINVASVAGLGGNPPE-----V-----------------------------------------------MDTIAY 166 (259)
T ss_pred cCCeEEEEECChhhccCCCcc-----c-----------------------------------------------cCcchH
Confidence 255789999997654322100 0 123679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..|.+++.+ ..++++.+++|+.+-.+.... .. ..+......+.. ..-+...+
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~---~~------~~~~~~~~~~~~---------~~~~~~~~ 228 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG---TL------ERLGEDLLAHTP---------LGRLGDDE 228 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh---hh------HHHHHHHHhcCC---------CCCCcCHH
Confidence 99999999998765 347999999998886543211 11 111111111111 11223468
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++++..++.... ..-.|.++++.++
T Consensus 229 ~va~~~~~l~~~~~-~~~~G~~~~~~~~ 255 (259)
T PRK08213 229 DLKGAALLLASDAS-KHITGQILAVDGG 255 (259)
T ss_pred HHHHHHHHHhCccc-cCccCCEEEECCC
Confidence 88888777664322 2223677777654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.9e-14 Score=140.09 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=142.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||+|+||.++++.|++.|. +|+++.|+.... ....++ . ..++..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~---~Vi~~~r~~~~~----~~~~~~-------------~-------~~~~~~ 65 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA---RVALLDRSEDVA----EVAAQL-------------L-------GGNAKG 65 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH----HHHHHh-------------h-------CCceEE
Confidence 4689999999999999999999999986 457778864321 111000 0 135678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ ++ .+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 66 ~~~Dl~~~------~~-~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 138 (255)
T PRK06841 66 LVCDVSDS------QS-VEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA 138 (255)
T ss_pred EEecCCCH------HH-HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc
Confidence 99999953 22 22333 3689999999975431 235567899999999999988652 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||....... .....|+
T Consensus 139 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 162 (255)
T PRK06841 139 GGGKIVNLASQAGVVAL--------------------------------------------------------ERHVAYC 162 (255)
T ss_pred CCceEEEEcchhhccCC--------------------------------------------------------CCCchHH
Confidence 45789999997543211 1235699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++.+..++|+.|..+... ..|.. ........+. ....+.+.++
T Consensus 163 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~--~~~~~------~~~~~~~~~~---------~~~~~~~~~~ 225 (255)
T PRK06841 163 ASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGK--KAWAG------EKGERAKKLI---------PAGRFAYPEE 225 (255)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccc--cccch------hHHHHHHhcC---------CCCCCcCHHH
Confidence 9999988877654 35799999999998765321 01110 0011111111 1234678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.++
T Consensus 226 va~~~~~l~~~~~~-~~~G~~i~~dgg 251 (255)
T PRK06841 226 IAAAALFLASDAAA-MITGENLVIDGG 251 (255)
T ss_pred HHHHHHHHcCcccc-CccCCEEEECCC
Confidence 99999988753322 223677777665
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.1e-14 Score=138.40 Aligned_cols=216 Identities=14% Similarity=0.177 Sum_probs=134.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||+++++.|+++|+ .|.+..|+... .+.+. ... ..++.+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~---~v~~~~~~~~~---~~~~~-------------~~~--------~~~~~~ 56 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA---IVGLHGTRVEK---LEALA-------------AEL--------GERVKI 56 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 3689999999999999999999999986 34455554211 11111 010 146788
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+ +..+|+|||+|+.... .+.++..+++|+.|+.++++.+.+. .
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (245)
T PRK12936 57 FPANLSD-------RDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR 129 (245)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 9999995 3323333 2468999999997532 1346777899999999998877532 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||........ ....|+
T Consensus 130 ~~~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y~ 153 (245)
T PRK12936 130 RYGRIINITSVVGVTGNP--------------------------------------------------------GQANYC 153 (245)
T ss_pred CCCEEEEECCHHhCcCCC--------------------------------------------------------CCcchH
Confidence 557899999965432211 124588
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.. ..++++++++|+.+..+...... +. ......+.. ....+...++
T Consensus 154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~-------~~~~~~~~~--------~~~~~~~~~~ 215 (245)
T PRK12936 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN---DK-------QKEAIMGAI--------PMKRMGTGAE 215 (245)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC---hH-------HHHHHhcCC--------CCCCCcCHHH
Confidence 8888666555432 35799999999987554321110 00 000001111 1122456899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++..++... ...-.++++++.++
T Consensus 216 ia~~~~~l~~~~-~~~~~G~~~~~~~g 241 (245)
T PRK12936 216 VASAVAYLASSE-AAYVTGQTIHVNGG 241 (245)
T ss_pred HHHHHHHHcCcc-ccCcCCCEEEECCC
Confidence 999997766422 12224788998876
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-13 Score=135.69 Aligned_cols=163 Identities=16% Similarity=0.195 Sum_probs=114.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|+++|+ +|+++.|+... .+.+. ++. ..++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~---~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA---RVAITGRDPAS---LEAAR-------------AEL--------GESALV 56 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEecCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 4689999999999999999999999986 45677775321 11111 111 145778
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|++++ ++ ...+ ...+|+|||+||...+. +.++..+++|+.|+.++++++... ...
T Consensus 57 ~~~D~~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 129 (249)
T PRK06500 57 IRADAGDV------AA-QKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP 129 (249)
T ss_pred EEecCCCH------HH-HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 89999853 22 1222 24689999999975432 345677999999999999999752 233
Q ss_pred eEEEEEeccc-ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 155 KVFVHVSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 155 k~fV~vSTa~-v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.++|++||.. .++. ...+.|+.
T Consensus 130 ~~~i~~~S~~~~~~~---------------------------------------------------------~~~~~Y~~ 152 (249)
T PRK06500 130 ASIVLNGSINAHIGM---------------------------------------------------------PNSSVYAA 152 (249)
T ss_pred CEEEEEechHhccCC---------------------------------------------------------CCccHHHH
Confidence 4677776643 2221 12367999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
||+..|.+++.+ ..+++++++||+.+.++.
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 999999999654 348999999999998864
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=139.97 Aligned_cols=226 Identities=18% Similarity=0.180 Sum_probs=141.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+++||||+|+||++++++|++.|+. |+++.|.... .+.+.+++ + ...++.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~---v~~~~~~~~~---~~~~~~~~-------------~------~~~~~~ 69 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAK---VCIVDLQDDL---GQNVCDSL-------------G------GEPNVC 69 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHh-------------c------CCCceE
Confidence 357899999999999999999999999964 4666664321 11111111 0 014688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF---------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 70 ~~~~Dl~d-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 142 (280)
T PLN02253 70 FFHCDVTV-------EDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIM 142 (280)
T ss_pred EEEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 99999995 333334433 68999999997532 1346778999999999999877642
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+-.++|++||....-.. ..+.
T Consensus 143 ~~~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~ 166 (280)
T PLN02253 143 IPLKKGSIVSLCSVASAIGG--------------------------------------------------------LGPH 166 (280)
T ss_pred HhcCCceEEEecChhhcccC--------------------------------------------------------CCCc
Confidence 123478888876542110 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCC-CCCCccccccchHHHHH---HHhcCCCceeecCCCcee
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKE-PFPGWVEDLKTINALFV---ASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~-p~~gw~~~~~~~~~~i~---~~~~G~~~~~~~~~~~~~ 300 (570)
.|+.||+..|.+++.. ..++.+..++|+.|.++... ..+. . ......+. ....... ....
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~-------~l~~ 235 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPE---D-ERTEDALAGFRAFAGKNA-------NLKG 235 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccc---c-cchhhhhhhhHHHhhcCC-------CCcC
Confidence 7999999999998765 34799999999999775421 1111 0 00001111 1100000 0011
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+.++|+|++++.++.... ..-.+.++++.++
T Consensus 236 ~~~~~~dva~~~~~l~s~~~-~~i~G~~i~vdgG 268 (280)
T PLN02253 236 VELTVDDVANAVLFLASDEA-RYISGLNLMIDGG 268 (280)
T ss_pred CCCCHHHHHHHHHhhcCccc-ccccCcEEEECCc
Confidence 23678999999988775322 1223677888765
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.4e-13 Score=134.05 Aligned_cols=195 Identities=15% Similarity=0.137 Sum_probs=131.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+++|+||||||++|+++++.|++.|+ +|+++.|+... .+++.+++ +. ..++..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~---~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~ 58 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY---KVAITARDQKE---LEEAAAEL---------NN----------KGNVLG 58 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEeeCCHHH---HHHHHHHH---------hc----------cCcEEE
Confidence 3579999999999999999999999885 46788886421 12222111 10 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (570)
+.+|+++ .+....++ ..+|+|||+|+..... +.++..+++|+.|+..+++.+.+. .+
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (237)
T PRK07326 59 LAADVRD-------EADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG 131 (237)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC
Confidence 9999995 33223333 3689999999875431 235567899999999998887643 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|..
T Consensus 132 ~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~y~~ 155 (237)
T PRK07326 132 GGYIINISSLAGTNFF--------------------------------------------------------AGGAAYNA 155 (237)
T ss_pred CeEEEEECChhhccCC--------------------------------------------------------CCCchHHH
Confidence 5679999987643211 12346999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..+.+.+.. ..+++++++||+.+.++.....+. ......+..+|+
T Consensus 156 sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~---------------------------~~~~~~~~~~d~ 208 (237)
T PRK07326 156 SKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS---------------------------EKDAWKIQPEDI 208 (237)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc---------------------------hhhhccCCHHHH
Confidence 999888777653 358999999999886643211000 000113678999
Q ss_pred HHHHHHHHHHh
Q 008315 309 VNAMIVAMVAH 319 (570)
Q Consensus 309 a~aii~a~~~~ 319 (570)
+.+++.++..+
T Consensus 209 a~~~~~~l~~~ 219 (237)
T PRK07326 209 AQLVLDLLKMP 219 (237)
T ss_pred HHHHHHHHhCC
Confidence 99999888643
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.8e-13 Score=136.28 Aligned_cols=219 Identities=14% Similarity=0.104 Sum_probs=143.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|++|||||+|+||+.++++|++.|+. |+++.|+. +. . ...++.+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~---v~~~~~~~--------~~--------------~--------~~~~~~~ 52 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAK---VIGFDQAF--------LT--------------Q--------EDYPFAT 52 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEecch--------hh--------------h--------cCCceEE
Confidence 67899999999999999999999999964 46777753 00 0 0246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+|+..... +.++..+++|+.++..+++.+... .
T Consensus 53 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 125 (252)
T PRK08220 53 FVLDVSD-------AAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ 125 (252)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 9999995 333334443 489999999975432 345677999999999999988542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 126 ~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 149 (252)
T PRK08220 126 RSGAIVTVGSNAAHVPR--------------------------------------------------------IGMAAYG 149 (252)
T ss_pred CCCEEEEECCchhccCC--------------------------------------------------------CCCchhH
Confidence 34589999997543211 1236799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccc-cccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVE-DLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~-~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..|.+++.. ..++++++++|+.|.++....+..... ......+....... ......++.++
T Consensus 150 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 220 (252)
T PRK08220 150 ASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKL---------GIPLGKIARPQ 220 (252)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhh---------cCCCcccCCHH
Confidence 9999999988765 357999999999998875321100000 00000000111111 11234578999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... .-.+++..+.++
T Consensus 221 dva~~~~~l~~~~~~-~~~g~~i~~~gg 247 (252)
T PRK08220 221 EIANAVLFLASDLAS-HITLQDIVVDGG 247 (252)
T ss_pred HHHHHHHHHhcchhc-CccCcEEEECCC
Confidence 999999988753322 223556655554
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.8e-13 Score=133.45 Aligned_cols=214 Identities=17% Similarity=0.229 Sum_probs=138.1
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+||||+|+||+.+++.|+++|+. |+++.|+.... .+.+.++ ++. . ..++.++.+|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~---v~~~~r~~~~~--~~~~~~~---------~~~-~--------~~~~~~~~~D~ 57 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK---VIITYRSSEEG--AEEVVEE---------LKA-Y--------GVKALGVVCDV 57 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCchhH--HHHHHHH---------HHh-c--------CCceEEEEecC
Confidence 689999999999999999999864 57888864211 1111111 111 1 13578899999
Q ss_pred CCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceEE
Q 008315 95 SSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKVF 157 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~f 157 (570)
++ .+..+.++ ..+|+|||+||..... +.++..+++|+.++..+++.+... .+.++|
T Consensus 58 ~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01830 58 SD-------REDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRI 130 (239)
T ss_pred CC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEE
Confidence 95 33233433 3479999999986421 335667899999999999988653 245689
Q ss_pred EEEeccccc-CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 158 VHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 158 V~vSTa~v~-~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
|++||.... +.. ....|+.+|+
T Consensus 131 v~~sS~~~~~g~~---------------------------------------------------------~~~~y~~~k~ 153 (239)
T TIGR01830 131 INISSVVGLMGNA---------------------------------------------------------GQANYAASKA 153 (239)
T ss_pred EEECCccccCCCC---------------------------------------------------------CCchhHHHHH
Confidence 999996543 211 1356999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..|.+++.. ..+++++++||+.+.++...+.+ ..+..... +... ..-+.++++++++
T Consensus 154 a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---------~~~~~~~~-~~~~--------~~~~~~~~~~a~~ 215 (239)
T TIGR01830 154 GVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS---------EKVKKKIL-SQIP--------LGRFGTPEEVANA 215 (239)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC---------hHHHHHHH-hcCC--------cCCCcCHHHHHHH
Confidence 888776654 35899999999988654322111 01111111 1111 1124578999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++... .....+++||+.++
T Consensus 216 ~~~~~~~~-~~~~~g~~~~~~~g 237 (239)
T TIGR01830 216 VAFLASDE-ASYITGQVIHVDGG 237 (239)
T ss_pred HHHHhCcc-cCCcCCCEEEeCCC
Confidence 98877432 22234789999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-13 Score=135.85 Aligned_cols=220 Identities=15% Similarity=0.176 Sum_probs=142.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||+++++.|++.|+. |+++.|+.+ .+.+.+.+. +. ..++.+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~---v~~~~~~~~----~~~~~~~~~----------~~--------~~~~~~ 67 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGAD---IIITTHGTN----WDETRRLIE----------KE--------GRKVTF 67 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCcH----HHHHHHHHH----------hc--------CCceEE
Confidence 47899999999999999999999999864 467777622 122221110 00 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 68 ~~~D~~~-------~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 140 (258)
T PRK06935 68 VQVDLTK-------PESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ 140 (258)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 68999999997532 1346677899999988888777542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 141 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 164 (258)
T PRK06935 141 GSGKIINIASMLSFQGG--------------------------------------------------------KFVPAYT 164 (258)
T ss_pred CCeEEEEECCHHhccCC--------------------------------------------------------CCchhhH
Confidence 45689999998764321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.. ..++.+.+++|+.|..+...+.+.. .. ....... . .+ ...+...+|
T Consensus 165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~----~~---~~~~~~~-~---~~-----~~~~~~~~d 228 (258)
T PRK06935 165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD----KN---RNDEILK-R---IP-----AGRWGEPDD 228 (258)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC----hH---HHHHHHh-c---CC-----CCCCCCHHH
Confidence 9999999988765 4479999999999877643222110 00 0001111 0 11 123566689
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++..++..... .-.+.++.+.++
T Consensus 229 va~~~~~l~s~~~~-~~~G~~i~~dgg 254 (258)
T PRK06935 229 LMGAAVFLASRASD-YVNGHILAVDGG 254 (258)
T ss_pred HHHHHHHHcChhhc-CCCCCEEEECCC
Confidence 99999887753322 223677777655
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.8e-13 Score=134.65 Aligned_cols=218 Identities=12% Similarity=0.113 Sum_probs=141.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|+++|+. |+++.|+... ...+.+. + . ..++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---vi~~~r~~~~-~~~~~~~-------------~-~--------~~~~~~ 56 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGAD---IVGAGRSEPS-ETQQQVE-------------A-L--------GRRFLS 56 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCchHH-HHHHHHH-------------h-c--------CCceEE
Confidence 57999999999999999999999999964 5677775321 1111111 0 0 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ ++ .+.++ .++|+|||+||..... +.++..+++|+.++..+++.+... .
T Consensus 57 ~~~D~~~~------~~-~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 129 (248)
T TIGR01832 57 LTADLSDI------EA-IKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQ 129 (248)
T ss_pred EECCCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999963 22 22222 3589999999975321 346677899999999999988542 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... ....|
T Consensus 130 ~~~g~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y 153 (248)
T TIGR01832 130 GRGGKIINIASMLSFQGGI--------------------------------------------------------RVPSY 153 (248)
T ss_pred CCCeEEEEEecHHhccCCC--------------------------------------------------------CCchh
Confidence 2 46899999987654321 23469
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++.+++++|+.|..+....... ........ ... .+ ...++..+
T Consensus 154 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~-~~~---~~-----~~~~~~~~ 217 (248)
T TIGR01832 154 TASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-------DEDRNAAI-LER---IP-----AGRWGTPD 217 (248)
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-------ChHHHHHH-Hhc---CC-----CCCCcCHH
Confidence 99999999988765 347999999999997764321110 00000001 111 11 13578899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEecc
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s 333 (570)
|+|++++.++..... .-.+.++.+.+
T Consensus 218 dva~~~~~l~s~~~~-~~~G~~i~~dg 243 (248)
T TIGR01832 218 DIGGPAVFLASSASD-YVNGYTLAVDG 243 (248)
T ss_pred HHHHHHHHHcCcccc-CcCCcEEEeCC
Confidence 999999888753221 22255555544
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-13 Score=135.56 Aligned_cols=218 Identities=17% Similarity=0.091 Sum_probs=134.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
++|+|||||||||++++++|++.|++| .++ .|+.. ..+...+++ +. . ..++..+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v---~~~~~~~~~---~~~~~~~~~---------~~-~--------~~~~~~~~ 57 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTV---AVNYQQNLH---AAQEVVNLI---------TQ-A--------GGKAFVLQ 57 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEE---EEEeCCChH---HHHHHHHHH---------Hh-C--------CCeEEEEE
Confidence 589999999999999999999999754 333 34321 111111111 11 0 14578899
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHHHHcc----
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVNFAKKCV---- 152 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~~a~~~~---- 152 (570)
+|+++ .+..+.+++ .+|+|||+|+..... +.++..+++|+.|+..+++.+....
T Consensus 58 ~D~~d-------~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 130 (247)
T PRK09730 58 ADISD-------ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKH 130 (247)
T ss_pred ccCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC
Confidence 99995 332334333 478999999964221 2355778999999988887664420
Q ss_pred --CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 153 --KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 153 --~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
+-.+||++||........ .....
T Consensus 131 ~~~~g~~v~~sS~~~~~~~~-------------------------------------------------------~~~~~ 155 (247)
T PRK09730 131 GGSGGAIVNVSSAASRLGAP-------------------------------------------------------GEYVD 155 (247)
T ss_pred CCCCcEEEEECchhhccCCC-------------------------------------------------------Ccccc
Confidence 124699999975532110 11246
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.+|+..|.+++.. ..+++++++||+.++++..... +..........+.. . ....+.
T Consensus 156 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~--------~~~~~~~~~~~~~~----~-----~~~~~~ 218 (247)
T PRK09730 156 YAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG--------GEPGRVDRVKSNIP----M-----QRGGQP 218 (247)
T ss_pred hHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC--------CCHHHHHHHHhcCC----C-----CCCcCH
Confidence 999999999887654 3589999999999998753210 01111111211111 0 012367
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... ...+.+|++.++
T Consensus 219 ~dva~~~~~~~~~~~~-~~~g~~~~~~g~ 246 (247)
T PRK09730 219 EEVAQAIVWLLSDKAS-YVTGSFIDLAGG 246 (247)
T ss_pred HHHHHHHHhhcChhhc-CccCcEEecCCC
Confidence 9999999887753322 123567776553
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-13 Score=134.25 Aligned_cols=221 Identities=13% Similarity=0.096 Sum_probs=141.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||.+++++|++.|. +|+++.|+... .+.+.+++ +. . ..++.+
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~---~Vi~~~r~~~~---~~~~~~~l---------~~-~--------~~~~~~ 63 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA---DVLIAARTESQ---LDEVAEQI---------RA-A--------GRRAHV 63 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh-c--------CCcEEE
Confidence 5789999999999999999999999986 45778886422 11111111 11 0 246888
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+.+|+++ ++..+.++ .++|+|||+|+..... +.++..+++|+.|+..+++++...
T Consensus 64 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (263)
T PRK07814 64 VAADLAH-------PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEH 136 (263)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhh
Confidence 9999995 33333333 3689999999864321 345677899999999999998641
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... ...+.|
T Consensus 137 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 160 (263)
T PRK07814 137 SGGGSVINISSTMGRLAG--------------------------------------------------------RGFAAY 160 (263)
T ss_pred cCCeEEEEEccccccCCC--------------------------------------------------------CCCchh
Confidence 245789999986432110 124579
Q ss_pred HHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 232 VFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 232 ~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
+.||+..|.+++.. ..++.+..++|+.|..+.... +.++ ..+ .....+.. ....+...++
T Consensus 161 ~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~---~~~~----~~~-~~~~~~~~--------~~~~~~~~~~ 224 (263)
T PRK07814 161 GTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV---VAAN----DEL-RAPMEKAT--------PLRRLGDPED 224 (263)
T ss_pred HHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh---ccCC----HHH-HHHHHhcC--------CCCCCcCHHH
Confidence 99999999988765 346889999999886542211 0000 111 11111111 1123457899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ....+.++.+.++
T Consensus 225 va~~~~~l~~~~~-~~~~g~~~~~~~~ 250 (263)
T PRK07814 225 IAAAAVYLASPAG-SYLTGKTLEVDGG 250 (263)
T ss_pred HHHHHHHHcCccc-cCcCCCEEEECCC
Confidence 9999998875322 2223566666554
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=134.71 Aligned_cols=196 Identities=12% Similarity=0.083 Sum_probs=133.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+++||||||++|+.+++.|+++|. +|+++.|+... .+++.+++ ++ . ..++.++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~-~--------~~~~~~~ 60 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW---DLALVARSQDA---LEALAAEL---------RS-T--------GVKAAAY 60 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh-C--------CCcEEEE
Confidence 468999999999999999999999986 56888886532 11222111 11 0 2468889
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
.+|++++ +....++ ..+|+|||+||..... +.++..+++|+.|+.++++.+... .+
T Consensus 61 ~~D~~~~-------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 133 (241)
T PRK07454 61 SIDLSNP-------EAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG 133 (241)
T ss_pred EccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence 9999963 2222333 3589999999975322 245667899999999988877431 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|.+||...+... .....|+.
T Consensus 134 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 157 (241)
T PRK07454 134 GGLIINVSSIAARNAF--------------------------------------------------------PQWGAYCV 157 (241)
T ss_pred CcEEEEEccHHhCcCC--------------------------------------------------------CCccHHHH
Confidence 5789999998765421 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..++++.++||+.+-.+..+. . . . .... .....++.+++
T Consensus 158 sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~------~-~-~-----------~~~~-----~~~~~~~~~~v 213 (241)
T PRK07454 158 SKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT------E-T-V-----------QADF-----DRSAMLSPEQV 213 (241)
T ss_pred HHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc------c-c-c-----------cccc-----ccccCCCHHHH
Confidence 999999887653 458999999999987653210 0 0 0 0000 01135799999
Q ss_pred HHHHHHHHH
Q 008315 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 214 a~~~~~l~~ 222 (241)
T PRK07454 214 AQTILHLAQ 222 (241)
T ss_pred HHHHHHHHc
Confidence 999999875
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.4e-14 Score=137.60 Aligned_cols=221 Identities=15% Similarity=0.159 Sum_probs=139.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++|+||||+|+||+++++.|+++|+. ++++.|+... ..+.+.++ ++. ...++.+
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~---v~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~~ 59 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFA---VAVNYAGSAA--AADELVAE---------IEA---------AGGRAIA 59 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEecCCCHH--HHHHHHHH---------HHh---------cCCeEEE
Confidence 36899999999999999999999999964 3455554321 11111111 111 0256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-ccCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (570)
+.+|++++ +..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+.+ +..-
T Consensus 60 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 132 (245)
T PRK12937 60 VQADVADA-------AAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG 132 (245)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC
Confidence 99999953 22334433 68999999997542 123566789999999999988864 2233
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... ...+.|+.+
T Consensus 133 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (245)
T PRK12937 133 GRIINLSTSVIALPL--------------------------------------------------------PGYGPYAAS 156 (245)
T ss_pred cEEEEEeeccccCCC--------------------------------------------------------CCCchhHHH
Confidence 589999986543211 124679999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..++.+++++|+.+-++... +. .. ...+..+.... ...-+.+++|++
T Consensus 157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~------~~-~~-~~~~~~~~~~~---------~~~~~~~~~d~a 219 (245)
T PRK12937 157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF------NG-KS-AEQIDQLAGLA---------PLERLGTPEEIA 219 (245)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc------cc-CC-HHHHHHHHhcC---------CCCCCCCHHHHH
Confidence 99999988764 34789999999987654310 00 00 01111111111 111234679999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++... ...-.+.++++.++
T Consensus 220 ~~~~~l~~~~-~~~~~g~~~~~~~g 243 (245)
T PRK12937 220 AAVAFLAGPD-GAWVNGQVLRVNGG 243 (245)
T ss_pred HHHHHHcCcc-ccCccccEEEeCCC
Confidence 9988777432 22223678888654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.4e-14 Score=159.83 Aligned_cols=227 Identities=17% Similarity=0.208 Sum_probs=149.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.||+||||||+|+||+++++.|++.|. +|+++.|+.... +.+.+ +.. . ..++..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga---~Vvl~~r~~~~~---~~~~~-------------~l~----~--~~~v~~ 474 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA---CVVLADLDEEAA---EAAAA-------------ELG----G--PDRALG 474 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC---EEEEEeCCHHHH---HHHHH-------------HHh----c--cCcEEE
Confidence 5789999999999999999999999885 467888864321 11110 110 0 136889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+.+. .
T Consensus 475 v~~Dvtd-------~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 547 (681)
T PRK08324 475 VACDVTD-------EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ 547 (681)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 33233333 368999999996432 1346677999999999998887542 1
Q ss_pred Cc-eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+. .+||++||....... .....|
T Consensus 548 ~~~g~iV~vsS~~~~~~~--------------------------------------------------------~~~~~Y 571 (681)
T PRK08324 548 GLGGSIVFIASKNAVNPG--------------------------------------------------------PNFGAY 571 (681)
T ss_pred CCCcEEEEECCccccCCC--------------------------------------------------------CCcHHH
Confidence 33 689999997554221 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccc-cCCCCCCCCccccccchHHHHHHHhcCCCc----eeecCCCceee
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVS-GTYKEPFPGWVEDLKTINALFVASAQGNLP----CLVGETKTIMD 301 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~-g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~----~~~~~~~~~~d 301 (570)
+.||+..|.+++.+ ..++++.+++|+.|+ ++... .+.|... .....|... ..+.+.....+
T Consensus 572 ~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~-~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~l~~ 642 (681)
T PRK08324 572 GAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW-TGEWIEA--------RAAAYGLSEEELEEFYRARNLLKR 642 (681)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc-cchhhhh--------hhhhccCChHHHHHHHHhcCCcCC
Confidence 99999999998765 346999999999997 44210 1122110 011111111 12334445667
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++|+|++++.++... .....+.+|++.++
T Consensus 643 ~v~~~DvA~a~~~l~s~~-~~~~tG~~i~vdgG 674 (681)
T PRK08324 643 EVTPEDVAEAVVFLASGL-LSKTTGAIITVDGG 674 (681)
T ss_pred ccCHHHHHHHHHHHhCcc-ccCCcCCEEEECCC
Confidence 899999999999887422 22234789999887
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.4e-13 Score=137.99 Aligned_cols=223 Identities=15% Similarity=0.131 Sum_probs=143.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|++| ++..|+..... .+.+.+.+ + +. ..++.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~V---i~~~~~~~~~~-~~~~~~~~---------~-~~--------~~~~~~ 104 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADV---AISYLPVEEED-AQDVKKII---------E-EC--------GRKAVL 104 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEE---EEecCCcchhh-HHHHHHHH---------H-Hc--------CCeEEE
Confidence 578999999999999999999999999754 45555433221 12222110 0 11 245788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
+.+|+++ .+..+.++ ..+|++||+||... + .+.++..+++|+.|+..+++++... ..
T Consensus 105 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 177 (294)
T PRK07985 105 LPGDLSD-------EKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK 177 (294)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Confidence 9999995 32222332 35899999998632 1 1346778999999999999988653 22
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+.... ....|+.
T Consensus 178 ~g~iv~iSS~~~~~~~~--------------------------------------------------------~~~~Y~a 201 (294)
T PRK07985 178 GASIITTSSIQAYQPSP--------------------------------------------------------HLLDYAA 201 (294)
T ss_pred CCEEEEECCchhccCCC--------------------------------------------------------CcchhHH
Confidence 35899999987653211 1357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..++++.+++|+.|.++.... +.. .......+... .+ ...+...+|+
T Consensus 202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~--~~~-----~~~~~~~~~~~----~~-----~~r~~~pedv 265 (294)
T PRK07985 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS--GGQ-----TQDKIPQFGQQ----TP-----MKRAGQPAEL 265 (294)
T ss_pred HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc--cCC-----CHHHHHHHhcc----CC-----CCCCCCHHHH
Confidence 999998887654 358999999999998874311 100 01111111111 01 1134567899
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+++..++..... --.+.++.+.++
T Consensus 266 a~~~~fL~s~~~~-~itG~~i~vdgG 290 (294)
T PRK07985 266 APVYVYLASQESS-YVTAEVHGVCGG 290 (294)
T ss_pred HHHHHhhhChhcC-CccccEEeeCCC
Confidence 9999888753322 223677777665
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-13 Score=136.55 Aligned_cols=226 Identities=13% Similarity=0.131 Sum_probs=139.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||.+++++|++.|+.| .+..+.... . .+....+ ++.. ..++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v---~~~~~~~~~-~-~~~~~~~---------~~~~---------~~~~~~ 58 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALV---AIHYGNRKE-E-AEETVYE---------IQSN---------GGSAFS 58 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeE---EEEcCCCHH-H-HHHHHHH---------HHhc---------CCceEE
Confidence 578999999999999999999999999654 344332211 1 1111111 1111 135677
Q ss_pred EEccCCCCCCCCChhhhHHHHh---------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHH-cc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW---------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKK-CV 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (570)
+..|++++.- .....+.+. ..+|++||+||.... . +.++..+++|+.|+..+++.+.. +.
T Consensus 59 ~~~D~~~~~~---~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~ 135 (252)
T PRK12747 59 IGANLESLHG---VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR 135 (252)
T ss_pred EecccCCHHH---HHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 8899985320 011111221 269999999996422 1 23577789999999999987765 33
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (252)
T PRK12747 136 DNSRIINISSAATRISL--------------------------------------------------------PDFIAYS 159 (252)
T ss_pred cCCeEEEECCcccccCC--------------------------------------------------------CCchhHH
Confidence 33589999998654321 1135799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++.+..+.|+.|.++.... +... .......... .....+...+|
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~---~~~~-----~~~~~~~~~~--------~~~~~~~~~~d 223 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE---LLSD-----PMMKQYATTI--------SAFNRLGEVED 223 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh---cccC-----HHHHHHHHhc--------CcccCCCCHHH
Confidence 9999999988764 458999999999997764321 1110 0111111100 01124678899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++.... ..-.+.++.+.++
T Consensus 224 va~~~~~l~s~~~-~~~~G~~i~vdgg 249 (252)
T PRK12747 224 IADTAAFLASPDS-RWVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHHHcCccc-cCcCCcEEEecCC
Confidence 9999988765222 1223667777654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=136.76 Aligned_cols=223 Identities=14% Similarity=0.145 Sum_probs=140.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||||+||++++++|.+.|. +|+++.|+.... ...++.+
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~v~~~~r~~~~~------------------------------~~~~~~~ 53 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGA---RVVTTARSRPDD------------------------------LPEGVEF 53 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCC---EEEEEeCChhhh------------------------------cCCceeE
Confidence 6899999999999999999999999986 457888864210 0245788
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKF---------DERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
+.+|++++ +..+.+ ...+|+|||+||.... .+.++..+++|+.|+..+++.+.. +
T Consensus 54 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (260)
T PRK06523 54 VAADLTTA-------EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMI 126 (260)
T ss_pred EecCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 99999953 322222 2468999999995421 134677789999999888776543 1
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||........ .....
T Consensus 127 ~~~~g~ii~isS~~~~~~~~-------------------------------------------------------~~~~~ 151 (260)
T PRK06523 127 ARGSGVIIHVTSIQRRLPLP-------------------------------------------------------ESTTA 151 (260)
T ss_pred hcCCcEEEEEecccccCCCC-------------------------------------------------------CCcch
Confidence 1346799999975542110 12467
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCcccccc-chHHHHHHHhcCCCceeecCCCceeecc
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
|+.||+..|.+++.. ..++.+.+++|+.|.++..... +.+.+... ........+.... ...+ ..-+.
T Consensus 152 Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p-----~~~~~ 225 (260)
T PRK06523 152 YAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-GGIP-----LGRPA 225 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHh-ccCc-----cCCCC
Confidence 999999999887765 3579999999999987643110 00000000 0001000000000 0011 11245
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+++|+++..++..... .-.++++++.++
T Consensus 226 ~~~~va~~~~~l~s~~~~-~~~G~~~~vdgg 255 (260)
T PRK06523 226 EPEEVAELIAFLASDRAA-SITGTEYVIDGG 255 (260)
T ss_pred CHHHHHHHHHHHhCcccc-cccCceEEecCC
Confidence 678999999888753222 223678888776
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-13 Score=135.96 Aligned_cols=160 Identities=16% Similarity=0.221 Sum_probs=112.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||++|++++++|++.|++ |+++.|++... +.+. ... ..++.++.+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~---V~~~~r~~~~~---~~~~-------------~~~--------~~~~~~~~~ 53 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHK---VIATGRRQERL---QELK-------------DEL--------GDNLYIAQL 53 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHH-------------HHh--------ccceEEEEe
Confidence 57999999999999999999999864 57788864321 1111 110 146788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
|++++ ++ .+.++ .++|+|||+||... + .+.++..+++|+.|+..+++.+... .+.
T Consensus 54 Dl~~~------~~-i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 126 (248)
T PRK10538 54 DVRNR------AA-IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_pred cCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 99953 22 22333 36999999998632 1 1345677899999977777665431 256
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... ...+.|+.+
T Consensus 127 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 150 (248)
T PRK10538 127 GHIINIGSTAGSWPY--------------------------------------------------------AGGNVYGAT 150 (248)
T ss_pred cEEEEECCcccCCCC--------------------------------------------------------CCCchhHHH
Confidence 789999997543110 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
|+..|.+.+.. ..++.+.+++|+.+.++
T Consensus 151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 99999988764 35799999999999765
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.3e-13 Score=135.04 Aligned_cols=220 Identities=10% Similarity=0.099 Sum_probs=136.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||++++++|++.|.. ++++.+... ....+.+. + +++. ..++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~---vv~~~~~~~-~~~~~~~~-~---------~~~~---------~~~~~~ 57 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFK---VVAGCGPNS-PRRVKWLE-D---------QKAL---------GFDFIA 57 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCCh-HHHHHHHH-H---------HHhc---------CCcEEE
Confidence 46899999999999999999999999964 344443221 11111111 1 1110 135778
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 58 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (246)
T PRK12938 58 SEGNVGD-------WDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER 130 (246)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 8999995 32223333 368999999997532 134567789999998887766543 1 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 131 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 154 (246)
T PRK12938 131 GWGRIINISSVNGQKGQ--------------------------------------------------------FGQTNYS 154 (246)
T ss_pred CCeEEEEEechhccCCC--------------------------------------------------------CCChhHH
Confidence 55789999997543211 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.. ..++++.+++|+.+.++..... ....+..+... . ....+...++
T Consensus 155 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~---------~~~~~~~~~~~-~--------~~~~~~~~~~ 216 (246)
T PRK12938 155 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---------RPDVLEKIVAT-I--------PVRRLGSPDE 216 (246)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc---------ChHHHHHHHhc-C--------CccCCcCHHH
Confidence 9999887776553 4579999999999876543211 01111111111 1 1223467899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++..++..... ...++++.+.++
T Consensus 217 v~~~~~~l~~~~~~-~~~g~~~~~~~g 242 (246)
T PRK12938 217 IGSIVAWLASEESG-FSTGADFSLNGG 242 (246)
T ss_pred HHHHHHHHcCcccC-CccCcEEEECCc
Confidence 99998887753222 223667776554
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.9e-13 Score=136.74 Aligned_cols=195 Identities=15% Similarity=0.158 Sum_probs=131.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||+++++.|++.|. +|+++.|+... .+.+.+++ .+. ..++.+
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~---~Vi~~~R~~~~---l~~~~~~l---------~~~---------~~~~~~ 93 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA---TVVAVARREDL---LDAVADRI---------TRA---------GGDAMA 93 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 4789999999999999999999999885 45788886421 12222111 110 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc---------cCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD---------ERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~---------~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+..+++.+.. +
T Consensus 94 ~~~Dl~d-------~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 166 (293)
T PRK05866 94 VPCDLSD-------LDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGML 166 (293)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 332334443 789999999975321 22456789999998888876542 1
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||..+..... ...+.
T Consensus 167 ~~~~g~iv~isS~~~~~~~~-------------------------------------------------------p~~~~ 191 (293)
T PRK05866 167 ERGDGHIINVATWGVLSEAS-------------------------------------------------------PLFSV 191 (293)
T ss_pred hcCCcEEEEECChhhcCCCC-------------------------------------------------------CCcch
Confidence 2457899999975543110 12367
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.. ..++.+.+++|+.|-.+...+.. ...+ ...+..
T Consensus 192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~----------------------~~~~-----~~~~~p 244 (293)
T PRK05866 192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK----------------------AYDG-----LPALTA 244 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc----------------------cccC-----CCCCCH
Confidence 999999999887654 45899999999987654321100 0000 123678
Q ss_pred HHHHHHHHHHHH
Q 008315 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
+++|+.++.++.
T Consensus 245 e~vA~~~~~~~~ 256 (293)
T PRK05866 245 DEAAEWMVTAAR 256 (293)
T ss_pred HHHHHHHHHHHh
Confidence 999999988886
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.8e-13 Score=134.13 Aligned_cols=217 Identities=12% Similarity=0.146 Sum_probs=140.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|+. |+++.|+... ..++..
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~---Vi~~~r~~~~--------------------------------~~~~~~ 48 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSN---VINFDIKEPS--------------------------------YNDVDY 48 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCccc--------------------------------cCceEE
Confidence 47899999999999999999999999964 5677776422 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+... .
T Consensus 49 ~~~D~~~~-------~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 121 (258)
T PRK06398 49 FKVDVSNK-------EQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ 121 (258)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 99999963 2222333 3689999999975321 346677899999999998887542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 122 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 145 (258)
T PRK06398 122 DKGVIINIASVQSFAVT--------------------------------------------------------RNAAAYV 145 (258)
T ss_pred CCeEEEEeCcchhccCC--------------------------------------------------------CCCchhh
Confidence 45789999997654321 1235799
Q ss_pred HHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccc--cchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDL--KTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..|.+.+.. ..++.+..++|+.|-.+.......+..+. ......+..+.. ......+...+
T Consensus 146 ~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~p~ 216 (258)
T PRK06398 146 TSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGE---------MHPMKRVGKPE 216 (258)
T ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhh---------cCCcCCCcCHH
Confidence 9999999988765 33589999999988665322111110000 000000111110 01112356689
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|++++.++.... ..-.+.++.+.++
T Consensus 217 eva~~~~~l~s~~~-~~~~G~~i~~dgg 243 (258)
T PRK06398 217 EVAYVVAFLASDLA-SFITGECVTVDGG 243 (258)
T ss_pred HHHHHHHHHcCccc-CCCCCcEEEECCc
Confidence 99999988775322 1223667776665
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.7e-13 Score=131.12 Aligned_cols=209 Identities=11% Similarity=0.087 Sum_probs=136.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||||+||++++++|++.|. +|+++.|+.... ....++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~---~v~~~~r~~~~~--------------------------------~~~~~~ 46 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH---QVIGIARSAIDD--------------------------------FPGELF 46 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEeCCcccc--------------------------------cCceEE
Confidence 578999999999999999999999985 457788865320 011467
Q ss_pred EccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
.+|++++ +..+.+++ ++|+|||+||..... +.+...+++|+.|+.++.+.+... .+.
T Consensus 47 ~~D~~~~-------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 119 (234)
T PRK07577 47 ACDLADI-------EQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQ 119 (234)
T ss_pred EeeCCCH-------HHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 8999953 22233333 589999999975432 235567899999998887776431 255
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...++.. ....|..|
T Consensus 120 ~~iv~~sS~~~~~~~---------------------------------------------------------~~~~Y~~s 142 (234)
T PRK07577 120 GRIVNICSRAIFGAL---------------------------------------------------------DRTSYSAA 142 (234)
T ss_pred cEEEEEccccccCCC---------------------------------------------------------CchHHHHH
Confidence 789999998754321 13579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..++.++++||+.+..+... ................ . ........+++|
T Consensus 143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~------~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~a 207 (234)
T PRK07577 143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFR------QTRPVGSEEEKRVLAS-I--------PMRRLGTPEEVA 207 (234)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccc------cccccchhHHHHHhhc-C--------CCCCCcCHHHHH
Confidence 99999887654 35899999999998765321 0000000111111110 0 111234678999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++..... ...+.++.+.++
T Consensus 208 ~~~~~l~~~~~~-~~~g~~~~~~g~ 231 (234)
T PRK07577 208 AAIAFLLSDDAG-FITGQVLGVDGG 231 (234)
T ss_pred HHHHHHhCcccC-CccceEEEecCC
Confidence 999988754322 223677877654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=140.28 Aligned_cols=157 Identities=15% Similarity=0.163 Sum_probs=112.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|.+.|+ +|+++.|+.... +.+. ..+++.+.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~---~Vi~~~r~~~~~---~~l~------------------------~~~~~~~~ 53 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW---RVFATCRKEEDV---AALE------------------------AEGLEAFQ 53 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH------------------------HCCceEEE
Confidence 57999999999999999999999885 457888864221 1111 13467899
Q ss_pred ccCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCcc-------cCHHHHHHHHHHH----HHHHHHHHHHcc
Q 008315 92 GDISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKFD-------ERYDVAFGINTLG----AIHLVNFAKKCV 152 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~g----t~~ll~~a~~~~ 152 (570)
+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.| ++.+++.+++.
T Consensus 54 ~Dl~d~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~- 125 (277)
T PRK05993 54 LDYAEP-------ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ- 125 (277)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-
Confidence 999952 2222322 2589999999875321 2356678999999 55566666554
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||.+.+... .....|+
T Consensus 126 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 149 (277)
T PRK05993 126 GQGRIVQCSSILGLVPM--------------------------------------------------------KYRGAYN 149 (277)
T ss_pred CCCEEEEECChhhcCCC--------------------------------------------------------CccchHH
Confidence 56789999997543211 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.||+..|.+++.. ..++.+++++|+.|-.+
T Consensus 150 asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 150 ASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 9999999987654 46899999999988664
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3e-13 Score=135.38 Aligned_cols=190 Identities=12% Similarity=0.142 Sum_probs=127.7
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++|+||||||+||+++++.|++.|++ |+++.|+... .+++. ++.+. ..++.++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~---v~~~~r~~~~---~~~~~-------------~~~~~------~~~~~~~~ 56 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT---LGLVARRTDA---LQAFA-------------ARLPK------AARVSVYA 56 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-------------Hhccc------CCeeEEEE
Confidence 479999999999999999999999864 5777776321 11111 11110 12688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHH-c--cC
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKK-C--VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (570)
+|++++ +..++++ ..+|++||+||.... . +.++..+++|+.|+..+++.... + .+
T Consensus 57 ~Dl~~~-------~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~ 129 (257)
T PRK07024 57 ADVRDA-------DALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR 129 (257)
T ss_pred cCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC
Confidence 999953 2233333 248999999997432 1 23567799999999998874421 2 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 130 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 153 (257)
T PRK07024 130 RGTLVGIASVAGVRGL--------------------------------------------------------PGAGAYSA 153 (257)
T ss_pred CCEEEEEechhhcCCC--------------------------------------------------------CCCcchHH
Confidence 5789999987654211 12356999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.. ..+++++++||+.|.++..... +. . .-..++.+++
T Consensus 154 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------------~~-----~----~~~~~~~~~~ 205 (257)
T PRK07024 154 SKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------------PY-----P----MPFLMDADRF 205 (257)
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------------CC-----C----CCCccCHHHH
Confidence 999999988654 4589999999999977532100 00 0 0013688999
Q ss_pred HHHHHHHHH
Q 008315 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|+.++.++.
T Consensus 206 a~~~~~~l~ 214 (257)
T PRK07024 206 AARAARAIA 214 (257)
T ss_pred HHHHHHHHh
Confidence 999988875
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-13 Score=136.00 Aligned_cols=162 Identities=15% Similarity=0.149 Sum_probs=112.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||||+||+++++.|++.|+ +|+++.|+.... +.+.+. .. .. ..++.++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~---~v~~~~r~~~~~---~~~~~~---------~~-~~--------~~~~~~~~ 57 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH---NVIAGVQIAPQV---TALRAE---------AA-RR--------GLALRVEK 57 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HH-hc--------CCcceEEE
Confidence 57899999999999999999999985 457888864221 111110 00 00 23588899
Q ss_pred ccCCCCCCCCChhhhHHHHhC-CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHH----HccCceEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWN-ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAK----KCVKLKVFVH 159 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~----~~~~lk~fV~ 159 (570)
+|++++ ++ ...+.. ++|+|||+|+..... +.++..+++|+.|+..+.+.+. +. +.+++|+
T Consensus 58 ~D~~~~------~~-~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~ 129 (257)
T PRK09291 58 LDLTDA------ID-RAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVF 129 (257)
T ss_pred eeCCCH------HH-HHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 999952 33 334444 899999999965321 2356678899999887766543 33 4579999
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... .....|+.||+..|
T Consensus 130 ~SS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~ 153 (257)
T PRK09291 130 TSSMAGLITG--------------------------------------------------------PFTGAYCASKHALE 153 (257)
T ss_pred EcChhhccCC--------------------------------------------------------CCcchhHHHHHHHH
Confidence 9987532211 12357999999999
Q ss_pred HHHHHh-----cCCCcEEEEecccccc
Q 008315 240 MIMQQS-----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 240 ~~v~~~-----~~~lp~~IvRPsiV~g 261 (570)
.+++.. ..+++++++||+.+..
T Consensus 154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t 180 (257)
T PRK09291 154 AIAEAMHAELKPFGIQVATVNPGPYLT 180 (257)
T ss_pred HHHHHHHHHHHhcCcEEEEEecCcccc
Confidence 887653 3589999999988744
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.8e-13 Score=134.12 Aligned_cols=216 Identities=12% Similarity=0.153 Sum_probs=139.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|+||++++++|++.|+ +|+++.|+.. . ..+.+.. ... ....++.++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~---~vi~~~r~~~-~-~~~~~~~-------------~~~-----~~~~~~~~~~~ 59 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY---RVIATYFSGN-D-CAKDWFE-------------EYG-----FTEDQVRLKEL 59 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCcH-H-HHHHHHH-------------Hhh-----ccCCeEEEEEc
Confidence 6899999999999999999999885 5678888753 1 1111110 000 01246889999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHH----HHccCc
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFA----KKCVKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~~~l 154 (570)
|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++.+.+ ++. +.
T Consensus 60 D~~~-------~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~ 131 (245)
T PRK12824 60 DVTD-------TEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GY 131 (245)
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CC
Confidence 9995 33222333 358999999997532 1345677899999999986654 333 56
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||...+.... ....|+.|
T Consensus 132 ~~iv~iss~~~~~~~~--------------------------------------------------------~~~~Y~~s 155 (245)
T PRK12824 132 GRIINISSVNGLKGQF--------------------------------------------------------GQTNYSAA 155 (245)
T ss_pred eEEEEECChhhccCCC--------------------------------------------------------CChHHHHH
Confidence 7999999976553211 12469999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.. ..++++++++|+.+.++...... . .....+... .....+..+++++
T Consensus 156 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~---~------~~~~~~~~~---------~~~~~~~~~~~va 217 (245)
T PRK12824 156 KAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG---P------EVLQSIVNQ---------IPMKRLGTPEEIA 217 (245)
T ss_pred HHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC---H------HHHHHHHhc---------CCCCCCCCHHHHH
Confidence 99888777654 34799999999998876432211 0 111111111 1122345678999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++..++..... .-.++++++.++
T Consensus 218 ~~~~~l~~~~~~-~~~G~~~~~~~g 241 (245)
T PRK12824 218 AAVAFLVSEAAG-FITGETISINGG 241 (245)
T ss_pred HHHHHHcCcccc-CccCcEEEECCC
Confidence 998777643222 234788998876
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.5e-13 Score=133.28 Aligned_cols=220 Identities=17% Similarity=0.185 Sum_probs=138.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||+++++.|++.|+.| +++.|.... ..+.+. ..++.+
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v---~~~~~~~~~--~~~~l~------------------------~~~~~~ 55 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKV---AVLYNSAEN--EAKELR------------------------EKGVFT 55 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEE---EEEeCCcHH--HHHHHH------------------------hCCCeE
Confidence 578999999999999999999999999654 455554321 111111 124678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ ++..+.++ .++|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 56 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~ 128 (255)
T PRK06463 56 IKCDVGN-------RDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS 128 (255)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 33233333 368999999987532 134567789999997666554432 2 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...++... .....|+
T Consensus 129 ~~g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~ 153 (255)
T PRK06463 129 KNGAIVNIASNAGIGTAA-------------------------------------------------------EGTTFYA 153 (255)
T ss_pred CCcEEEEEcCHHhCCCCC-------------------------------------------------------CCccHhH
Confidence 446899999987653210 1135699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++..++|+.|-.+....... . .....+...+... .....+...++
T Consensus 154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~--~--~~~~~~~~~~~~~---------~~~~~~~~~~~ 220 (255)
T PRK06463 154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKS--Q--EEAEKLRELFRNK---------TVLKTTGKPED 220 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccC--c--cchHHHHHHHHhC---------CCcCCCcCHHH
Confidence 9999999888765 347999999999886543211000 0 0000111111110 11223467899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.+.++.+.++
T Consensus 221 va~~~~~l~s~~~~-~~~G~~~~~dgg 246 (255)
T PRK06463 221 IANIVLFLASDDAR-YITGQVIVADGG 246 (255)
T ss_pred HHHHHHHHcChhhc-CCCCCEEEECCC
Confidence 99999988753321 223678888776
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.9e-13 Score=134.23 Aligned_cols=221 Identities=12% Similarity=0.124 Sum_probs=141.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|++|||||||+||++++++|++.|++ |++..|+... .+.+.+++ +.. ..++.+
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~---vvl~~r~~~~---~~~~~~~l---------~~~---------~~~~~~ 62 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAE---IIINDITAER---AELAVAKL---------RQE---------GIKAHA 62 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCE---EEEEcCCHHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 47899999999999999999999999864 5677775321 11111111 111 135778
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+... .
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK08085 63 APFNVTHK-------QEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR 135 (254)
T ss_pred EecCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 89999953 2223333 358999999997432 2346678999999999998877653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 136 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (254)
T PRK08085 136 QAGKIINICSMQSELGR--------------------------------------------------------DTITPYA 159 (254)
T ss_pred CCcEEEEEccchhccCC--------------------------------------------------------CCCcchH
Confidence 34689999987532111 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++.+..++|+.+..+...+..+. ..+. ...... .....+...+|
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-------~~~~-~~~~~~--------~p~~~~~~~~~ 223 (254)
T PRK08085 160 ASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-------EAFT-AWLCKR--------TPAARWGDPQE 223 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-------HHHH-HHHHhc--------CCCCCCcCHHH
Confidence 9999999998875 3489999999999987654322110 0111 111111 11123556799
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++..... .-.+.+..+.++
T Consensus 224 va~~~~~l~~~~~~-~i~G~~i~~dgg 249 (254)
T PRK08085 224 LIGAAVFLSSKASD-FVNGHLLFVDGG 249 (254)
T ss_pred HHHHHHHHhCcccc-CCcCCEEEECCC
Confidence 99988887753222 112555555443
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=136.58 Aligned_cols=190 Identities=12% Similarity=0.058 Sum_probs=127.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||++++++|+++|+. |.+..|+.... +.+.+ + ..++.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~---v~~~~r~~~~~---~~~~~-------------~---------~~~~~~ 54 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGAR---VAIGDLDEALA---KETAA-------------E---------LGLVVG 54 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHHH-------------H---------hccceE
Confidence 46799999999999999999999999864 45666753221 11110 0 124678
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ ++ .+.+ ...+|++||+||..... +.++..+++|+.|+..+++.+... .
T Consensus 55 ~~~D~~~~------~~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 127 (273)
T PRK07825 55 GPLDVTDP------AS-FAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR 127 (273)
T ss_pred EEccCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999963 22 2222 24689999999975421 235667899999999988876532 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 128 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 151 (273)
T PRK07825 128 GRGHVVNVASLAGKIPV--------------------------------------------------------PGMATYC 151 (273)
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------CCCcchH
Confidence 55689999997654321 1235699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++++++|+.|-....... . .......+++++
T Consensus 152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-------------------------~--~~~~~~~~~~~~ 204 (273)
T PRK07825 152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT-------------------------G--GAKGFKNVEPED 204 (273)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc-------------------------c--cccCCCCCCHHH
Confidence 9998777655432 4589999999998754321100 0 011224688999
Q ss_pred HHHHHHHHHH
Q 008315 308 VVNAMIVAMV 317 (570)
Q Consensus 308 va~aii~a~~ 317 (570)
+|++++.++.
T Consensus 205 va~~~~~~l~ 214 (273)
T PRK07825 205 VAAAIVGTVA 214 (273)
T ss_pred HHHHHHHHHh
Confidence 9999998886
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-13 Score=133.83 Aligned_cols=218 Identities=12% Similarity=0.145 Sum_probs=137.7
Q ss_pred CCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCccc------HHH--HHHHHHhhhhhHHHHHhhhccccc
Q 008315 11 ENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTES------AAL--RFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 11 ~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~------~~~--rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
++|+|||||||| .||.+++++|++.|+. |+++.|+..+.. ..+ .+.++ +. ..
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~---vi~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~-~~----- 65 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGID---IFFTYWSPYDKTMPWGMHDKEPVLLKEE---------IE-SY----- 65 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCc---EEEEcCCccccccccccchhhHHHHHHH---------HH-hc-----
Confidence 679999999996 6999999999999864 577777632110 000 01111 11 11
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHH
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~ 146 (570)
..+++++.+|++++ ++ .+.++ ..+|+|||+||..... +.++..+++|+.|+..+++
T Consensus 66 ---~~~~~~~~~D~~~~------~~-~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 135 (256)
T PRK12748 66 ---GVRCEHMEIDLSQP------YA-PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSS 135 (256)
T ss_pred ---CCeEEEEECCCCCH------HH-HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 24688999999953 22 22222 3589999999875322 2356678999999999999
Q ss_pred HHHHc---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccc
Q 008315 147 FAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 147 ~a~~~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
.+... .+..++|++||...+....
T Consensus 136 ~~~~~~~~~~~~~iv~~ss~~~~~~~~----------------------------------------------------- 162 (256)
T PRK12748 136 AFAKQYDGKAGGRIINLTSGQSLGPMP----------------------------------------------------- 162 (256)
T ss_pred HHHHHhhhcCCeEEEEECCccccCCCC-----------------------------------------------------
Confidence 87542 1346899999876543211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCc
Q 008315 224 IHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKT 298 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
....|+.||+..|.+++.. ..+++++.++|+.+..+... +. ....... ..+.
T Consensus 163 ---~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~------~~-------~~~~~~~---~~~~---- 219 (256)
T PRK12748 163 ---DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT------EE-------LKHHLVP---KFPQ---- 219 (256)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC------hh-------HHHhhhc---cCCC----
Confidence 1256999999999987764 35799999999987654211 10 0000000 1111
Q ss_pred eeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+...+++++++..++.... ..-.+.++++.++
T Consensus 220 -~~~~~~~~~a~~~~~l~~~~~-~~~~g~~~~~d~g 253 (256)
T PRK12748 220 -GRVGEPVDAARLIAFLVSEEA-KWITGQVIHSEGG 253 (256)
T ss_pred -CCCcCHHHHHHHHHHHhCccc-ccccCCEEEecCC
Confidence 123456899999887664322 2223678888665
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=133.99 Aligned_cols=219 Identities=19% Similarity=0.236 Sum_probs=138.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+.+++|+||||||+||+.+++.|++.|++ ++++ .|+... .+.+.++ +.. ...++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~---v~~~~~r~~~~---~~~~~~~---------~~~---------~~~~~~ 58 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAK---VVIAYDINEEA---AQELLEE---------IKE---------EGGDAI 58 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHH---------HHh---------cCCeEE
Confidence 46789999999999999999999998864 4555 564321 1111111 111 024688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|++++ +..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+...
T Consensus 59 ~~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 131 (247)
T PRK05565 59 AVKADVSSE-------EDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIK 131 (247)
T ss_pred EEECCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 999999963 22223332 799999999986321 235677899999999988887642
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..+||++||........ ....|
T Consensus 132 ~~~~~~v~~sS~~~~~~~~--------------------------------------------------------~~~~y 155 (247)
T PRK05565 132 RKSGVIVNISSIWGLIGAS--------------------------------------------------------CEVLY 155 (247)
T ss_pred cCCcEEEEECCHhhccCCC--------------------------------------------------------CccHH
Confidence 1456799999876543211 12458
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.++... ..+++++++||+.+.++....... ........ . .....+...+
T Consensus 156 ~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---------~~~~~~~~----~-----~~~~~~~~~~ 217 (247)
T PRK05565 156 SASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---------EDKEGLAE----E-----IPLGRLGKPE 217 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---------HHHHHHHh----c-----CCCCCCCCHH
Confidence 88887777666543 458999999999986643321110 00011110 0 0112356789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++++.++..... .-.++++++..+
T Consensus 218 ~va~~~~~l~~~~~~-~~~g~~~~~~~~ 244 (247)
T PRK05565 218 EIAKVVLFLASDDAS-YITGQIITVDGG 244 (247)
T ss_pred HHHHHHHHHcCCccC-CccCcEEEecCC
Confidence 999998888753322 223677777654
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.2e-13 Score=132.54 Aligned_cols=227 Identities=15% Similarity=0.138 Sum_probs=140.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||||+||++++++|++.|+. |+++.|+... . ...+++ +.. ..++.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~---Vv~~~r~~~~---~-~~~~~~---------~~~---------~~~~~~ 58 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGAN---LILLDISPEI---E-KLADEL---------CGR---------GHRCTA 58 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEecCCHHH---H-HHHHHH---------HHh---------CCceEE
Confidence 57899999999999999999999999864 5677776421 1 111111 100 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ ++ .+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+... .
T Consensus 59 ~~~Dl~~~------~~-v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 131 (263)
T PRK08226 59 VVADVRDP------AS-VAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR 131 (263)
T ss_pred EECCCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 22 23333 3589999999975432 234566899999999999887542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||........ .....|+
T Consensus 132 ~~~~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~ 156 (263)
T PRK08226 132 KDGRIVMMSSVTGDMVAD-------------------------------------------------------PGETAYA 156 (263)
T ss_pred CCcEEEEECcHHhcccCC-------------------------------------------------------CCcchHH
Confidence 346899999865421100 1135699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..|.+++.+ ..++.+..++|+.|.++..+...+.... ......+..+..+. ....+.+.++
T Consensus 157 ~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~---------p~~~~~~~~~ 226 (263)
T PRK08226 157 LTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-EDPESVLTEMAKAI---------PLRRLADPLE 226 (263)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-CCcHHHHHHHhccC---------CCCCCCCHHH
Confidence 9999998888754 3479999999999987643211111000 01111222222111 1123468899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.++++-+.++
T Consensus 227 va~~~~~l~~~~~~-~~~g~~i~~dgg 252 (263)
T PRK08226 227 VGELAAFLASDESS-YLTGTQNVIDGG 252 (263)
T ss_pred HHHHHHHHcCchhc-CCcCceEeECCC
Confidence 99998877642221 223556666554
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-13 Score=139.80 Aligned_cols=175 Identities=15% Similarity=0.147 Sum_probs=115.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||.+++++|++.|+. |+++.|+.... +...++ ..++.+
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~---Vv~~~R~~~~~---~~~~~~----------------------l~~v~~ 75 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAH---VIVPARRPDVA---REALAG----------------------IDGVEV 75 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHH----------------------hhhCeE
Confidence 47899999999999999999999999864 56778863211 111100 023678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----ccCHHHHHHHHHHHHHHHHHHHH----HccC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----DERYDVAFGINTLGAIHLVNFAK----KCVK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~----~~~~ 153 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+..+++.+. +. +
T Consensus 76 ~~~Dl~d-------~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~ 147 (315)
T PRK06196 76 VMLDLAD-------LESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-A 147 (315)
T ss_pred EEccCCC-------HHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-C
Confidence 9999995 33233333 368999999996432 23467789999999777666543 33 3
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... +.+.......+ ......|+.
T Consensus 148 ~~~iV~vSS~~~~~~~---~~~~~~~~~~~-----------------------------------------~~~~~~Y~~ 183 (315)
T PRK06196 148 GARVVALSSAGHRRSP---IRWDDPHFTRG-----------------------------------------YDKWLAYGQ 183 (315)
T ss_pred CCeEEEECCHHhccCC---CCccccCccCC-----------------------------------------CChHHHHHH
Confidence 4689999997543211 00000000000 012357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCC
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
||+..+.+.+.. ..++.++++||+.|.++..
T Consensus 184 SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 184 SKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 999999887654 3579999999999988754
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.6e-13 Score=133.14 Aligned_cols=216 Identities=13% Similarity=0.148 Sum_probs=139.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++||||+|+||..+++.|++.|. +|+++.|+.... +...+++ ++. ..++.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~---~vi~~~r~~~~~---~~~~~~~---------~~~---------~~~~~~ 58 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA---KLALIDLNQEKL---EEAVAEC---------GAL---------GTEVRG 58 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHHH---------Hhc---------CCceEE
Confidence 4789999999999999999999999885 456777764221 1111111 110 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----------------ccCHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----------------DERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----------------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.+...+++|+.|+..+++
T Consensus 59 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 131 (253)
T PRK08217 59 YAANVTDE-------EDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR 131 (253)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence 99999853 2222222 358999999986321 12345668899999988876
Q ss_pred HHHH-c---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 147 FAKK-C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 147 ~a~~-~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
.+.. + ..-..+|++||...++..
T Consensus 132 ~~~~~l~~~~~~~~iv~~ss~~~~~~~----------------------------------------------------- 158 (253)
T PRK08217 132 EAAAKMIESGSKGVIINISSIARAGNM----------------------------------------------------- 158 (253)
T ss_pred HHHHHHHhcCCCeEEEEEccccccCCC-----------------------------------------------------
Confidence 5543 1 122468999987554321
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCC
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETK 297 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~ 297 (570)
....|+.||+..|.+++.. ..+++++.++|+.|.++...... ......+..+.
T Consensus 159 ----~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~--------- 216 (253)
T PRK08217 159 ----GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK---------PEALERLEKMI--------- 216 (253)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---------HHHHHHHHhcC---------
Confidence 2357999999999987765 35799999999999876432210 11111111111
Q ss_pred ceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 298 TIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 298 ~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
....+.+++++|+++..++.. ..-.+.+|+++++
T Consensus 217 ~~~~~~~~~~~a~~~~~l~~~---~~~~g~~~~~~gg 250 (253)
T PRK08217 217 PVGRLGEPEEIAHTVRFIIEN---DYVTGRVLEIDGG 250 (253)
T ss_pred CcCCCcCHHHHHHHHHHHHcC---CCcCCcEEEeCCC
Confidence 112356889999999988752 2224789998876
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.9e-13 Score=137.00 Aligned_cols=200 Identities=17% Similarity=0.254 Sum_probs=131.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +++ . ..++.+
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~---~Vvl~~R~~~~---l~~~~~~---------l~~-~--------g~~~~~ 61 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA---KVVLLARGEEG---LEALAAE---------IRA-A--------GGEALA 61 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHH-c--------CCcEEE
Confidence 5789999999999999999999999986 45778886421 1112111 111 1 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+|+...+. +.++..+++|+.|+.++.+.+.. + .
T Consensus 62 v~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~ 134 (334)
T PRK07109 62 VVADVAD-------AEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR 134 (334)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 33233333 3689999999975432 33566788998888776665543 1 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||...+... .....|+
T Consensus 135 ~~g~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (334)
T PRK07109 135 DRGAIIQVGSALAYRSI--------------------------------------------------------PLQSAYC 158 (334)
T ss_pred CCcEEEEeCChhhccCC--------------------------------------------------------CcchHHH
Confidence 35789999998776422 1235799
Q ss_pred HHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 233 FTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+.... ..++.+++++|+.|.++.. .|..+ .. .........++..
T Consensus 159 asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~----~~~~~--------------~~---~~~~~~~~~~~~p 217 (334)
T PRK07109 159 AAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQF----DWARS--------------RL---PVEPQPVPPIYQP 217 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchh----hhhhh--------------hc---cccccCCCCCCCH
Confidence 9999888776543 2468999999998865421 11110 00 0001112346788
Q ss_pred HHHHHHHHHHHH
Q 008315 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
+++|++++.++.
T Consensus 218 e~vA~~i~~~~~ 229 (334)
T PRK07109 218 EVVADAILYAAE 229 (334)
T ss_pred HHHHHHHHHHHh
Confidence 999999999886
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=132.16 Aligned_cols=201 Identities=14% Similarity=0.134 Sum_probs=129.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|+++|.. |++..|+... .+.+.++ ++.. ..++.++.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~---V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~~~~ 56 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWR---LALADVNEEG---GEETLKL---------LREA---------GGDGFYQRC 56 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH---------HHhc---------CCceEEEEc
Confidence 57999999999999999999999864 5677775422 1111111 1111 246788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHH----HHccCc
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFA----KKCVKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~~l 154 (570)
|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+..+.+.+ ++. +.
T Consensus 57 D~~~~-------~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~ 128 (270)
T PRK05650 57 DVRDY-------SQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KS 128 (270)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CC
Confidence 99953 2223333 3689999999976431 235566889998888876654 333 56
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 129 ~~iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~s 152 (270)
T PRK05650 129 GRIVNIASMAGLMQG--------------------------------------------------------PAMSSYNVA 152 (270)
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------CCchHHHHH
Confidence 789999997654321 123579999
Q ss_pred HHHHHHHHHH----h-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQ----S-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~----~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+. + ..++.+++++|+.|.++.........+ .....+.... ....++++++|
T Consensus 153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~vA 216 (270)
T PRK05650 153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNP---AMKAQVGKLL-------------EKSPITAADIA 216 (270)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCch---hHHHHHHHHh-------------hcCCCCHHHHH
Confidence 9986655543 3 458999999999998764432211111 0011111111 11247899999
Q ss_pred HHHHHHHH
Q 008315 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
+.++.++.
T Consensus 217 ~~i~~~l~ 224 (270)
T PRK05650 217 DYIYQQVA 224 (270)
T ss_pred HHHHHHHh
Confidence 99998886
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=130.36 Aligned_cols=222 Identities=14% Similarity=0.099 Sum_probs=139.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||.++++.|++.|+ +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 59 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA---KVVVGARRQAE---LDQLVAE---------IRAE---------GGEAVA 59 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 4789999999999999999999999996 46788887432 1111111 1111 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
+.+|++++ +..+.+++ .+|++||+||.... . +.++..+++|+.|+..+.+.+.. +
T Consensus 60 ~~~D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~ 132 (254)
T PRK07478 60 LAGDVRDE-------AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA 132 (254)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999953 32233333 68999999997532 1 33567799999988887765543 1
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||...+.... .....|
T Consensus 133 ~~~~~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~Y 157 (254)
T PRK07478 133 RGGGSLIFTSTFVGHTAGF-------------------------------------------------------PGMAAY 157 (254)
T ss_pred cCCceEEEEechHhhccCC-------------------------------------------------------CCcchh
Confidence 1346799999976542110 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++.+..++|+.|-.+...... . .. . ......... ....+...+
T Consensus 158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~---~~-~-~~~~~~~~~--------~~~~~~~~~ 221 (254)
T PRK07478 158 AASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG---D---TP-E-ALAFVAGLH--------ALKRMAQPE 221 (254)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc---C---CH-H-HHHHHHhcC--------CCCCCcCHH
Confidence 99999999888764 34799999999998665321110 0 00 0 011111110 112346789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|++++.++..... .-.|.++.+.++
T Consensus 222 ~va~~~~~l~s~~~~-~~~G~~~~~dgg 248 (254)
T PRK07478 222 EIAQAALFLASDAAS-FVTGTALLVDGG 248 (254)
T ss_pred HHHHHHHHHcCchhc-CCCCCeEEeCCc
Confidence 999999887753322 223566666543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-12 Score=129.49 Aligned_cols=193 Identities=16% Similarity=0.142 Sum_probs=130.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||||+||++++++|+++|. +|.++.|+.... +.+.+ .++...+ ..++.++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~---~v~~~~r~~~~~---~~~~~---------~~~~~~~-------~~~~~~~~ 59 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR---DLALCARRTDRL---EELKA---------ELLARYP-------GIKVAVAA 59 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHHHH---HHHHH---------HHHhhCC-------CceEEEEE
Confidence 68999999999999999999999985 457778864221 11111 1222211 24688999
Q ss_pred ccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 92 GDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
+|++++ ++ .+.+ ...+|+|||+||..... +.++..+++|+.|+.++++.+... .+.
T Consensus 60 ~D~~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 132 (248)
T PRK08251 60 LDVNDH------DQ-VFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGS 132 (248)
T ss_pred cCCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 999963 22 2232 23689999999875332 234567899999999998877532 256
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||++||........ +..+.|+.|
T Consensus 133 ~~iv~~sS~~~~~~~~-------------------------------------------------------~~~~~Y~~s 157 (248)
T PRK08251 133 GHLVLISSVSAVRGLP-------------------------------------------------------GVKAAYAAS 157 (248)
T ss_pred CeEEEEeccccccCCC-------------------------------------------------------CCcccHHHH
Confidence 7899999965432110 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.... ..++++++++|+.|.++.... .+. ....++.+++|
T Consensus 158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-------------------~~~----------~~~~~~~~~~a 208 (248)
T PRK08251 158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK-------------------AKS----------TPFMVDTETGV 208 (248)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc-------------------ccc----------CCccCCHHHHH
Confidence 99988877654 347899999999987643210 000 11247789999
Q ss_pred HHHHHHHH
Q 008315 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 209 ~~i~~~~~ 216 (248)
T PRK08251 209 KALVKAIE 216 (248)
T ss_pred HHHHHHHh
Confidence 99988885
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.5e-13 Score=131.38 Aligned_cols=217 Identities=12% Similarity=0.151 Sum_probs=138.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||+|+||++++++|++.|++| ++..|.... ..+.+. .+. ..++.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~v---v~~~~~~~~--~~~~~~-------------~~~--------~~~~~~~ 57 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARV---VVNYHQSED--AAEALA-------------DEL--------GDRAIAL 57 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeE---EEEcCCCHH--HHHHHH-------------HHh--------CCceEEE
Confidence 67899999999999999999999999754 444443221 111111 111 1468889
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------C-ccEEEEcCccCC---------cc----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------E-LDVMVNSAAITK---------FD----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~-vdiVih~Aa~v~---------f~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.+|++++ ++ .+.+++ . +|+|||+|+... +. +.+...+++|+.|+..+++.+.
T Consensus 58 ~~D~~~~------~~-~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 130 (253)
T PRK08642 58 QADVTDR------EQ-VQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAAL 130 (253)
T ss_pred EcCCCCH------HH-HHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHH
Confidence 9999953 22 233332 2 899999997521 11 2355679999999999999986
Q ss_pred Hc---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 150 KC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 150 ~~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
.. .+..++|++||...... . .
T Consensus 131 ~~~~~~~~g~iv~iss~~~~~~---------~-----------------------------------------------~ 154 (253)
T PRK08642 131 PGMREQGFGRIINIGTNLFQNP---------V-----------------------------------------------V 154 (253)
T ss_pred HHHHhcCCeEEEEECCccccCC---------C-----------------------------------------------C
Confidence 42 24468999998533211 0 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceee
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
+.+.|+.||+..|.+++.. ..++.+..++|+.|..+... .. ........+. ... ....
T Consensus 155 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~~-----~~~~~~~~~~-~~~--------~~~~ 217 (253)
T PRK08642 155 PYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---AA-----TPDEVFDLIA-ATT--------PLRK 217 (253)
T ss_pred CccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh---cc-----CCHHHHHHHH-hcC--------CcCC
Confidence 2457999999999999875 35789999999988654221 11 0111111111 111 1124
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+...+|+++++..++.... ..-.|.++.+.++
T Consensus 218 ~~~~~~va~~~~~l~~~~~-~~~~G~~~~vdgg 249 (253)
T PRK08642 218 VTTPQEFADAVLFFASPWA-RAVTGQNLVVDGG 249 (253)
T ss_pred CCCHHHHHHHHHHHcCchh-cCccCCEEEeCCC
Confidence 7888999999988886332 2234677777654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=3e-13 Score=140.12 Aligned_cols=126 Identities=15% Similarity=0.161 Sum_probs=87.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||||+||.++++.|++.|. +|+++.|+.... +.+.+++ +. ...++.++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~~~---~~~~~~l---------~~---------~~~~~~~~ 60 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW---HVIMACRNLKKA---EAAAQEL---------GI---------PPDSYTII 60 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHHHh---------hc---------cCCceEEE
Confidence 689999999999999999999999985 457777753211 1111111 00 02468889
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+..+++++... .
T Consensus 61 ~~Dl~~-------~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 133 (322)
T PRK07453 61 HIDLGD-------LDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKS 133 (322)
T ss_pred EecCCC-------HHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhC
Confidence 999995 332333333 48999999996421 1346677899999999999887642 1
Q ss_pred C--ceEEEEEecccccC
Q 008315 153 K--LKVFVHVSTAYVAG 167 (570)
Q Consensus 153 ~--lk~fV~vSTa~v~~ 167 (570)
+ ..++|++||...+.
T Consensus 134 ~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 134 PAPDPRLVILGTVTANP 150 (322)
T ss_pred CCCCceEEEEcccccCc
Confidence 1 25899999976653
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.7e-12 Score=129.70 Aligned_cols=223 Identities=13% Similarity=0.128 Sum_probs=140.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|++ |+++.|+.... .+.+.++ ++.. ..++..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~---v~~~~r~~~~~--~~~~~~~---------l~~~---------~~~~~~ 62 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGAD---VALFDLRTDDG--LAETAEH---------IEAA---------GRRAIQ 62 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCcchH--HHHHHHH---------HHhc---------CCceEE
Confidence 57999999999999999999999999864 56777764321 1111111 1110 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+.. + .
T Consensus 63 ~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 135 (254)
T PRK06114 63 IAADVTSK-------ADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN 135 (254)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 99999953 2223333 3579999999975431 34677789999999888777643 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||........+ .....|+
T Consensus 136 ~~~~iv~isS~~~~~~~~~------------------------------------------------------~~~~~Y~ 161 (254)
T PRK06114 136 GGGSIVNIASMSGIIVNRG------------------------------------------------------LLQAHYN 161 (254)
T ss_pred CCcEEEEECchhhcCCCCC------------------------------------------------------CCcchHH
Confidence 3468999998764321110 0135799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++.+++|+.|.++.... +... .....+.. . .+ ..-+..++|
T Consensus 162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~-~~~~-------~~~~~~~~-~---~p-----~~r~~~~~d 224 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR-PEMV-------HQTKLFEE-Q---TP-----MQRMAKVDE 224 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc-ccch-------HHHHHHHh-c---CC-----CCCCcCHHH
Confidence 9999888887654 458999999999987764321 1110 11111111 0 11 112456799
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... .--.|+++.+.++
T Consensus 225 va~~~~~l~s~~~-~~~tG~~i~~dgg 250 (254)
T PRK06114 225 MVGPAVFLLSDAA-SFCTGVDLLVDGG 250 (254)
T ss_pred HHHHHHHHcCccc-cCcCCceEEECcC
Confidence 9999988775322 2223667776654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.3e-13 Score=133.41 Aligned_cols=220 Identities=16% Similarity=0.168 Sum_probs=141.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.|.. ++++.|+... .+++.+++ +. . ..++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~---vv~~~r~~~~---~~~~~~~l---------~~-~--------~~~~~~ 64 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINADA---ANHVVDEI---------QQ-L--------GGQAFA 64 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHHHH---------Hh-c--------CCcEEE
Confidence 46899999999999999999999999864 5666665322 22222111 11 0 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c---cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D---ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|++++ ++ .+.++ ..+|+|||+||.... + +.++..+++|+.|+.++++++... .+
T Consensus 65 ~~~D~~~~------~~-i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 137 (255)
T PRK06113 65 CRCDITSE------QE-LSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_pred EEccCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC
Confidence 89999952 22 22322 358999999997532 2 345666899999999999998631 13
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 138 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (255)
T PRK06113 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_pred CcEEEEEecccccCCC--------------------------------------------------------CCcchhHH
Confidence 3589999997643111 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+++.. ..++.+.++.|+.+..+... +.. . ..+........ ....+...+|+
T Consensus 162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~---~~~----~-~~~~~~~~~~~---------~~~~~~~~~d~ 224 (255)
T PRK06113 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---SVI----T-PEIEQKMLQHT---------PIRRLGQPQDI 224 (255)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc---ccc----C-HHHHHHHHhcC---------CCCCCcCHHHH
Confidence 999999998765 34688999999998764321 100 0 11111111110 11234577999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++.++.... ..-.++++++.++
T Consensus 225 a~~~~~l~~~~~-~~~~G~~i~~~gg 249 (255)
T PRK06113 225 ANAALFLCSPAA-SWVSGQILTVSGG 249 (255)
T ss_pred HHHHHHHcCccc-cCccCCEEEECCC
Confidence 999988875322 1223778888776
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-13 Score=132.80 Aligned_cols=220 Identities=12% Similarity=0.111 Sum_probs=140.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||||+||.+++++|++.|++ |++..|+... .+.+.++ ++.. ..++.+
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 62 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQ---VAIAARHLDA---LEKLADE---------IGTS---------GGKVVP 62 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 57999999999999999999999999964 5677775321 1222211 1111 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~-~- 152 (570)
+.+|++++ +..+.++ ..+|++||+||..... +.++..+++|+.|+..+++++.. + +
T Consensus 63 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (253)
T PRK05867 63 VCCDVSQH-------QQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQ 135 (253)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence 99999953 2223333 3799999999975432 34566789999999999998854 2 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||........ + .....|
T Consensus 136 ~~~g~iv~~sS~~~~~~~~------------~------------------------------------------~~~~~Y 161 (253)
T PRK05867 136 GQGGVIINTASMSGHIINV------------P------------------------------------------QQVSHY 161 (253)
T ss_pred CCCcEEEEECcHHhcCCCC------------C------------------------------------------CCccch
Confidence 1 24688888765321100 0 112579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++.+..++|+.|-.+..+..+. ........ .+ ...+...+
T Consensus 162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~----------~~~~~~~~----~~-----~~r~~~p~ 222 (253)
T PRK05867 162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE----------YQPLWEPK----IP-----LGRLGRPE 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH----------HHHHHHhc----CC-----CCCCcCHH
Confidence 99999999988765 358999999999996654322111 11111111 11 12356789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|++++.++.... ..-.+++..+.++
T Consensus 223 ~va~~~~~L~s~~~-~~~tG~~i~vdgG 249 (253)
T PRK05867 223 ELAGLYLYLASEAS-SYMTGSDIVIDGG 249 (253)
T ss_pred HHHHHHHHHcCccc-CCcCCCeEEECCC
Confidence 99999988875322 2223667777655
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.6e-12 Score=130.18 Aligned_cols=227 Identities=16% Similarity=0.129 Sum_probs=141.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||.+++++|++.|. +|+++.|++.. .+.+.+++ +... ...++.+
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~---~vv~~~r~~~~---~~~~~~~~---------~~~~-------~~~~~~~ 62 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGA---AVALADLDAAL---AERAAAAI---------ARDV-------AGARVLA 62 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhcc-------CCceEEE
Confidence 5789999999999999999999999996 45677775422 12221111 1110 0246888
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||...+ .+.++..+++|+.|+..+++.+.. + .
T Consensus 63 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (260)
T PRK07063 63 VPADVTDA-------ASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER 135 (260)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Confidence 99999953 2223333 368999999997532 134677789999999999888754 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 136 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (260)
T PRK07063 136 GRGSIVNIASTHAFKII--------------------------------------------------------PGCFPYP 159 (260)
T ss_pred CCeEEEEECChhhccCC--------------------------------------------------------CCchHHH
Confidence 34689999997654221 1134699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++.+..++|+.|-.+..... |. ............. .. .+ ..-+...++
T Consensus 160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~--~~-~~~~~~~~~~~~~-~~---~~-----~~r~~~~~~ 227 (260)
T PRK07063 160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW--WN-AQPDPAAARAETL-AL---QP-----MKRIGRPEE 227 (260)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh--hh-ccCChHHHHHHHH-hc---CC-----CCCCCCHHH
Confidence 9999999888764 3579999999999866532110 10 0001111111110 11 01 112456789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... --.+.+..+.++
T Consensus 228 va~~~~fl~s~~~~-~itG~~i~vdgg 253 (260)
T PRK07063 228 VAMTAVFLASDEAP-FINATCITIDGG 253 (260)
T ss_pred HHHHHHHHcCcccc-ccCCcEEEECCC
Confidence 99999988753221 223566666554
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.2e-13 Score=130.90 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=129.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||||+||++++++|+++|++ |+++.|+.. ++. ++.+ + ..++.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~---V~~~~r~~~------~~~-~~~~---------~---------~~~~~~~~~ 53 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ---VIACGRNQS------VLD-ELHT---------Q---------SANIFTLAF 53 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE---EEEEECCHH------HHH-HHHH---------h---------cCCCeEEEe
Confidence 68999999999999999999999864 578888532 211 1110 0 145788999
Q ss_pred cCCCCCCCCChhhhHHHHhCC----ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNE----LDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~----vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~v 160 (570)
|+++ .+..+.++++ +|+++|+||...+. +.++..+++|+.|+.++++.+... .+-.++|.+
T Consensus 54 D~~~-------~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~i 126 (240)
T PRK06101 54 DVTD-------HPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIV 126 (240)
T ss_pred eCCC-------HHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEE
Confidence 9995 3333455443 68999999864321 235667999999999999998753 233578888
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||....... .....|+.||+..|.
T Consensus 127 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 150 (240)
T PRK06101 127 GSIASELAL--------------------------------------------------------PRAEAYGASKAAVAY 150 (240)
T ss_pred echhhccCC--------------------------------------------------------CCCchhhHHHHHHHH
Confidence 886432110 123579999999999
Q ss_pred HHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHH
Q 008315 241 IMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 241 ~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
+.+.. ..+++++++||+.|.++..+... . . ....++.+++|+.++.+
T Consensus 151 ~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~-----------------------~--~---~~~~~~~~~~a~~i~~~ 202 (240)
T PRK06101 151 FARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT-----------------------F--A---MPMIITVEQASQEIRAQ 202 (240)
T ss_pred HHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC-----------------------C--C---CCcccCHHHHHHHHHHH
Confidence 87653 45899999999999875432100 0 0 00247899999999988
Q ss_pred HH
Q 008315 316 MV 317 (570)
Q Consensus 316 ~~ 317 (570)
+.
T Consensus 203 i~ 204 (240)
T PRK06101 203 LA 204 (240)
T ss_pred Hh
Confidence 86
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-12 Score=129.38 Aligned_cols=221 Identities=14% Similarity=0.094 Sum_probs=142.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||+.+++.|++.|. +|+++.|+... .+.+.++ +++ . ..++.+
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~~---------~~~-~--------~~~~~~ 64 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA---HVLVNGRNAAT---LEAAVAA---------LRA-A--------GGAAEA 64 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC---eEEEEeCCHHH---HHHHHHH---------HHh-c--------CCceEE
Confidence 5899999999999999999999999885 56788886421 1111111 111 1 245789
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ ++ ...++ ..+|+|||+|+..... +.++..+++|+.|+..+.+.+.+ + .
T Consensus 65 ~~~Dl~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 137 (256)
T PRK06124 65 LAFDIADE------EA-VAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ 137 (256)
T ss_pred EEccCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999953 22 22333 3579999999975321 34566789999999999977754 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 138 ~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~ 161 (256)
T PRK06124 138 GYGRIIAITSIAGQVAR--------------------------------------------------------AGDAVYP 161 (256)
T ss_pred CCcEEEEEeechhccCC--------------------------------------------------------CCccHhH
Confidence 55789999997643211 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.. ..++.+..++|+.|.++.... +... ..+...+... . ....++++++
T Consensus 162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~---~~~~----~~~~~~~~~~-~--------~~~~~~~~~~ 225 (256)
T PRK06124 162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA---MAAD----PAVGPWLAQR-T--------PLGRWGRPEE 225 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh---hccC----hHHHHHHHhc-C--------CCCCCCCHHH
Confidence 9999998887654 348999999999998764321 1100 1111111111 1 1123688999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.+++.++.... ..-.|..+.+.++
T Consensus 226 ~a~~~~~l~~~~~-~~~~G~~i~~dgg 251 (256)
T PRK06124 226 IAGAAVFLASPAA-SYVNGHVLAVDGG 251 (256)
T ss_pred HHHHHHHHcCccc-CCcCCCEEEECCC
Confidence 9999999876432 1223555555544
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.8e-13 Score=133.51 Aligned_cols=199 Identities=14% Similarity=0.109 Sum_probs=126.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||||+||++++++|+++|+ +|+++.|+... ++ ++ + ..++..+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~---~v~~~~r~~~~------~~-~~---------~-----------~~~~~~~~~ 52 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY---RVLAACRKPDD------VA-RM---------N-----------SLGFTGILL 52 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH------hH-HH---------H-----------hCCCeEEEe
Confidence 6899999999999999999999986 45677776421 11 11 0 124677889
Q ss_pred cCCCCCCCCChhhhHHHHh----CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHH----HHHHHHccCceEE
Q 008315 93 DISSEDLGLKDSNLKEELW----NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHL----VNFAKKCVKLKVF 157 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~----~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~l----l~~a~~~~~lk~f 157 (570)
|+++++. -.+..+.+. ..+|.++|+||..... +.++..+++|+.|+.++ ++.+++. +.+++
T Consensus 53 D~~~~~~---~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~i 128 (256)
T PRK08017 53 DLDDPES---VERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRI 128 (256)
T ss_pred ecCCHHH---HHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEE
Confidence 9985310 001111221 3579999999964321 23556789999998886 4444444 56789
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||.+..... ...+.|+.||+.
T Consensus 129 v~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~ 152 (256)
T PRK08017 129 VMTSSVMGLIST--------------------------------------------------------PGRGAYAASKYA 152 (256)
T ss_pred EEEcCcccccCC--------------------------------------------------------CCccHHHHHHHH
Confidence 999997543221 123579999999
Q ss_pred HHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 238 GEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.|.+.+.. ..+++++++||+.+.+.......... ... .....+....+++++||+|+++
T Consensus 153 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~~~~d~a~~~ 216 (256)
T PRK08017 153 LEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQ---------------SDK-PVENPGIAARFTLGPEAVVPKL 216 (256)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchh---------------hcc-chhhhHHHhhcCCCHHHHHHHH
Confidence 99887542 45899999999877543221100000 000 0011111223568999999999
Q ss_pred HHHHH
Q 008315 313 IVAMV 317 (570)
Q Consensus 313 i~a~~ 317 (570)
..++.
T Consensus 217 ~~~~~ 221 (256)
T PRK08017 217 RHALE 221 (256)
T ss_pred HHHHh
Confidence 98885
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-12 Score=131.33 Aligned_cols=218 Identities=11% Similarity=0.083 Sum_probs=137.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||.+++++|++.|+. |+++.|+... ..+++.+++ +. . ..++..+.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~---------~~-~--------~~~~~~~~ 58 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD---IGITWHSDEE--GAKETAEEV---------RS-H--------GVRAEIRQ 58 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHH---------Hh-c--------CCceEEEE
Confidence 689999999999999999999999964 4555554321 122222111 11 0 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHcc----C
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCV----K 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~----~ 153 (570)
+|++++ +..+.++ ..+|+|||+||..... +.++..+.+|+.|+..+++++.... +
T Consensus 59 ~Dl~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 131 (256)
T PRK12743 59 LDLSDL-------PEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ 131 (256)
T ss_pred ccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999953 2222332 3589999999975421 3456779999999999999886531 1
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 132 ~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 155 (256)
T PRK12743 132 GGRIINITSVHEHTPL--------------------------------------------------------PGASAYTA 155 (256)
T ss_pred CeEEEEEeeccccCCC--------------------------------------------------------CCcchhHH
Confidence 2589999986432110 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+|+..+.+++.. ..+++++.++|+.+.++.....+. ........+ .+ .......+|+
T Consensus 156 sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---------~~~~~~~~~----~~-----~~~~~~~~dv 217 (256)
T PRK12743 156 AKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---------DVKPDSRPG----IP-----LGRPGDTHEI 217 (256)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---------HHHHHHHhc----CC-----CCCCCCHHHH
Confidence 999999887654 347999999999998764321110 000000000 11 1123467999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++..++.... ..-.+.++.+.++
T Consensus 218 a~~~~~l~~~~~-~~~~G~~~~~dgg 242 (256)
T PRK12743 218 ASLVAWLCSEGA-SYTTGQSLIVDGG 242 (256)
T ss_pred HHHHHHHhCccc-cCcCCcEEEECCC
Confidence 999888775322 2223667777655
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-12 Score=131.29 Aligned_cols=227 Identities=14% Similarity=0.129 Sum_probs=141.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|+. |+++.|+... .+.+.+++ .. . ..++.+
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~---------~~-~--------~~~~~~ 63 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAK---VAILDRNQEK---AEAVVAEI---------KA-A--------GGEALA 63 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHH---------Hh-c--------CCeEEE
Confidence 57899999999999999999999999864 5677775321 11111111 11 0 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----------------------ccCHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----------------------DERYDVAFGINTLG 140 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----------------------~~~~~~~~~~Nv~g 140 (570)
+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.+
T Consensus 64 ~~~Dl~~~-------~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 64 VKADVLDK-------ESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHH
Confidence 99999953 2222332 368999999995321 13366778999999
Q ss_pred HHHHHHHHHH-c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhc
Q 008315 141 AIHLVNFAKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 141 t~~ll~~a~~-~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
+..+++.+.. + .+-.++|++||...+...
T Consensus 137 ~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------------------------------------------ 168 (278)
T PRK08277 137 TLLPTQVFAKDMVGRKGGNIINISSMNAFTPL------------------------------------------------ 168 (278)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEccchhcCCC------------------------------------------------
Confidence 9877766543 2 134689999998765321
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCcee
Q 008315 218 GTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCL 292 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~ 292 (570)
.....|+.||+..|.+++.. ..++.+..++|+.|.++..+.....-+.. ...........
T Consensus 169 --------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~----- 233 (278)
T PRK08277 169 --------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGS--LTERANKILAH----- 233 (278)
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccccc--chhHHHHHhcc-----
Confidence 12357999999999888764 34799999999999876432111000000 00000111110
Q ss_pred ecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 293 VGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 293 ~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
....-+...+|+|++++.++.......-.+.+..+.++
T Consensus 234 ----~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 234 ----TPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred ----CCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 11123566799999998877631111223566766554
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-12 Score=130.38 Aligned_cols=173 Identities=19% Similarity=0.194 Sum_probs=117.0
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+.+++|+|+||||||+||.+++++|++.|. +|+++.|+... .+++.++ +++.. ..+
T Consensus 7 ~~~~~~k~vlItG~~g~iG~~la~~l~~~G~---~Vi~~~r~~~~---~~~~~~~---------l~~~~--------~~~ 63 (247)
T PRK08945 7 PDLLKDRIILVTGAGDGIGREAALTYARHGA---TVILLGRTEEK---LEAVYDE---------IEAAG--------GPQ 63 (247)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC---cEEEEeCCHHH---HHHHHHH---------HHhcC--------CCC
Confidence 3467899999999999999999999999886 45788886421 1222211 11111 245
Q ss_pred eEEEEccCCCCCCCCChhhh---H---HHHhCCccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 87 ITFVAGDISSEDLGLKDSNL---K---EELWNELDVMVNSAAITKF-----D---ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~---~---~~l~~~vdiVih~Aa~v~f-----~---~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.++.+|++.-+ ..+. . ......+|+|||+||.... + +.++..+++|+.|+.++++.+...
T Consensus 64 ~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l 139 (247)
T PRK08945 64 PAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLL 139 (247)
T ss_pred ceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 677888886211 1111 1 1222468999999987432 1 346778999999999998877531
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..+||++||....... ....
T Consensus 140 ~~~~~~~iv~~ss~~~~~~~--------------------------------------------------------~~~~ 163 (247)
T PRK08945 140 LKSPAASLVFTSSSVGRQGR--------------------------------------------------------ANWG 163 (247)
T ss_pred HhCCCCEEEEEccHhhcCCC--------------------------------------------------------CCCc
Confidence 256789999987543211 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.|+.||+.+|.++... ..++++++++|+.+.++
T Consensus 164 ~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 164 AYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 7999999999988764 34788999999988654
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-12 Score=130.27 Aligned_cols=218 Identities=11% Similarity=0.096 Sum_probs=134.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++|++|+||||||+||+++++.|++.|+. |+++.|+.... +.+. ++ -+..
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~---v~~~~r~~~~~---~~~~-------------~~----------~~~~ 54 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGAT---VVVGDIDPEAG---KAAA-------------DE----------VGGL 54 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHH-------------HH----------cCCc
Confidence 368999999999999999999999999864 56777754221 1111 00 0125
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc---------cCHHHHHHHHHHHHHHHHHHHHH-c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD---------ERYDVAFGINTLGAIHLVNFAKK-C 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~---------~~~~~~~~~Nv~gt~~ll~~a~~-~ 151 (570)
++.+|+++ ++..+.+++ ++|+|||+||..... +.++..+++|+.|+..+++.+.. +
T Consensus 55 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 55 FVPTDVTD-------EDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred EEEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 67899995 333334443 579999999875321 23567789999999888877643 1
Q ss_pred --cCceEEEEEeccc-ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 --VKLKVFVHVSTAY-VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 --~~lk~fV~vSTa~-v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+..++|++||.. +++.. ...
T Consensus 128 ~~~~~g~iv~~sS~~~~~g~~--------------------------------------------------------~~~ 151 (255)
T PRK06057 128 VRQGKGSIINTASFVAVMGSA--------------------------------------------------------TSQ 151 (255)
T ss_pred HHhCCcEEEEEcchhhccCCC--------------------------------------------------------CCC
Confidence 1345789888854 33211 113
Q ss_pred chHHHHHHHHHHHHH----Hh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQ----QS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~----~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+ ++ ..++.++++||+.|.++..... +.. .+...-... ...+ ...+.
T Consensus 152 ~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~---~~~~~~~~~-----~~~~-----~~~~~ 216 (255)
T PRK06057 152 ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FAK---DPERAARRL-----VHVP-----MGRFA 216 (255)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--ccC---CHHHHHHHH-----hcCC-----CCCCc
Confidence 569999976665554 33 4589999999999987643211 100 111110000 0111 12468
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++++++++...+..... .-.+..+.+.++
T Consensus 217 ~~~~~a~~~~~l~~~~~~-~~~g~~~~~~~g 246 (255)
T PRK06057 217 EPEEIAAAVAFLASDDAS-FITASTFLVDGG 246 (255)
T ss_pred CHHHHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 889999998776653222 222556666543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-12 Score=128.78 Aligned_cols=196 Identities=16% Similarity=0.140 Sum_probs=129.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||.++++.|+++|+. |+++.|+..+. +.+.++ ++... ..++.++.
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~---Vi~~~r~~~~~---~~~~~~---------~~~~~--------~~~~~~~~ 57 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGAR---LYLAARDVERL---ERLADD---------LRARG--------AVAVSTHE 57 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCE---EEEEeCCHHHH---HHHHHH---------HHHhc--------CCeEEEEe
Confidence 368999999999999999999999964 57888865321 121111 11111 24788999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceEEEEEe
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKVFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV~vS 161 (570)
+|++++.- -.+..+.+.+++|+|||+||..... +.+...+++|+.|+.++++.+... .+..+||++|
T Consensus 58 ~Dl~~~~~---~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~s 134 (243)
T PRK07102 58 LDILDTAS---HAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGIS 134 (243)
T ss_pred cCCCChHH---HHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99996310 0111222333579999999875322 223456899999999999887652 2457899999
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|....... .....|+.||+..+.+
T Consensus 135 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 158 (243)
T PRK07102 135 SVAGDRGR--------------------------------------------------------ASNYVYGSAKAALTAF 158 (243)
T ss_pred cccccCCC--------------------------------------------------------CCCcccHHHHHHHHHH
Confidence 87532111 0124599999998888
Q ss_pred HHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHH
Q 008315 242 MQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 242 v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
++.. ..++++.+++|+.|.++..... . .+ ..-.++++++|++++.++
T Consensus 159 ~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~--------------------~---~~-----~~~~~~~~~~a~~i~~~~ 210 (243)
T PRK07102 159 LSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL--------------------K---LP-----GPLTAQPEEVAKDIFRAI 210 (243)
T ss_pred HHHHHHHhhccCcEEEEEecCcccChhhhcc--------------------C---CC-----ccccCCHHHHHHHHHHHH
Confidence 7654 4589999999999987532110 0 00 012467899999998777
Q ss_pred H
Q 008315 317 V 317 (570)
Q Consensus 317 ~ 317 (570)
.
T Consensus 211 ~ 211 (243)
T PRK07102 211 E 211 (243)
T ss_pred h
Confidence 5
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.1e-13 Score=130.18 Aligned_cols=213 Identities=15% Similarity=0.165 Sum_probs=140.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||+++++.|++.|+. |+++.|+.... ...++.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~---v~~~~r~~~~~------------------------------~~~~~~~ 49 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQ---VYGVDKQDKPD------------------------------LSGNFHF 49 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCE---EEEEeCCcccc------------------------------cCCcEEE
Confidence 57899999999999999999999999864 46666653221 0145788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHHc---cCceEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKKC---VKLKVFV 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV 158 (570)
+.+|++++ -++. .+....+|+|||+||... +. +.++..+++|+.|+.++++.+... .+-.++|
T Consensus 50 ~~~D~~~~-----~~~~-~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv 123 (235)
T PRK06550 50 LQLDLSDD-----LEPL-FDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIII 123 (235)
T ss_pred EECChHHH-----HHHH-HHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEE
Confidence 99999853 1222 233457999999999542 11 345677999999999999988642 1335899
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||....... .....|+.+|+..
T Consensus 124 ~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 147 (235)
T PRK06550 124 NMCSIASFVAG--------------------------------------------------------GGGAAYTASKHAL 147 (235)
T ss_pred EEcChhhccCC--------------------------------------------------------CCCcccHHHHHHH
Confidence 99998654321 1235699999988
Q ss_pred HHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 239 EMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+.+.+.. ..++++++++|+.|.++.... .+.+ ..+........ ....+...+++|++++
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~--~~~~-----~~~~~~~~~~~---------~~~~~~~~~~~a~~~~ 211 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA--DFEP-----GGLADWVARET---------PIKRWAEPEEVAELTL 211 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCccccc--ccCc-----hHHHHHHhccC---------CcCCCCCHHHHHHHHH
Confidence 8777653 348999999999997764321 1111 01111111111 1223567799999999
Q ss_pred HHHHHhcCCCCCCceEEeccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++..... ...+.++.+.++
T Consensus 212 ~l~s~~~~-~~~g~~~~~~gg 231 (235)
T PRK06550 212 FLASGKAD-YMQGTIVPIDGG 231 (235)
T ss_pred HHcChhhc-cCCCcEEEECCc
Confidence 88854322 223567766654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.3e-12 Score=127.26 Aligned_cols=221 Identities=14% Similarity=0.200 Sum_probs=140.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||.+++++|++.|+ +|+++.|+... .+.+.+++ .+. ..++..
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~---~Vi~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 61 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA---HVIVSSRKLDG---CQAVADAI---------VAA---------GGKAEA 61 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 5789999999999999999999999986 45777775422 22222111 110 134678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----c---cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----D---ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----~---~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|++++ ++ .+.++ ..+|+|||+||.... + +.++..+++|+.|+..+++.+...
T Consensus 62 ~~~D~~~~------~~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 134 (252)
T PRK07035 62 LACHIGEM------EQ-IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE 134 (252)
T ss_pred EEcCCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 89999953 22 22332 358999999986421 1 235667899999999888777432
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||.+..... .....|
T Consensus 135 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 158 (252)
T PRK07035 135 QGGGSIVNVASVNGVSPG--------------------------------------------------------DFQGIY 158 (252)
T ss_pred CCCcEEEEECchhhcCCC--------------------------------------------------------CCCcch
Confidence 245789999986543211 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..++++..+.|+.|..+..+. +..+ ..+...... .. + ...+...+
T Consensus 159 ~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~---~~~~----~~~~~~~~~-~~---~-----~~~~~~~~ 222 (252)
T PRK07035 159 SITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA---LFKN----DAILKQALA-HI---P-----LRRHAEPS 222 (252)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc---ccCC----HHHHHHHHc-cC---C-----CCCcCCHH
Confidence 99999999998875 348999999999986653321 1111 111111111 11 0 11245678
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|++++..+..... ...+.++.+.++
T Consensus 223 ~va~~~~~l~~~~~~-~~~g~~~~~dgg 249 (252)
T PRK07035 223 EMAGAVLYLASDASS-YTTGECLNVDGG 249 (252)
T ss_pred HHHHHHHHHhCcccc-CccCCEEEeCCC
Confidence 999999887764322 223667777554
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.8e-12 Score=129.79 Aligned_cols=226 Identities=17% Similarity=0.209 Sum_probs=145.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||+.++++|++.|.. .|+++.|+.... +...++ ++. . ..++..
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~--~V~~~~r~~~~~---~~~~~~---------l~~-~--------~~~~~~ 60 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAA--GLVICGRNAEKG---EAQAAE---------LEA-L--------GAKAVF 60 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCC--eEEEEcCCHHHH---HHHHHH---------HHh-c--------CCeEEE
Confidence 57899999999999999999999998864 367777753221 111111 111 1 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHcc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKCV--- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (570)
+.+|++++ +....++ ..+|+|||+||.... .+.++..+++|+.|+.++++.+.+..
T Consensus 61 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 133 (260)
T PRK06198 61 VQADLSDV-------EDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRR 133 (260)
T ss_pred EEccCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 2223333 358999999997531 12346678999999999998885421
Q ss_pred -CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 -~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
...++|++||...++... ..+.|
T Consensus 134 ~~~g~iv~~ss~~~~~~~~--------------------------------------------------------~~~~Y 157 (260)
T PRK06198 134 KAEGTIVNIGSMSAHGGQP--------------------------------------------------------FLAAY 157 (260)
T ss_pred CCCCEEEEECCcccccCCC--------------------------------------------------------Ccchh
Confidence 125799999987654321 23679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccc-cchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDL-KTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.+|+..|.+++.. ..++.++.++|+.+.++...... ..+ +....++.....+ .....++++
T Consensus 158 ~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 225 (260)
T PRK06198 158 CASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQ---REFHGAPDDWLEKAAAT---------QPFGRLLDP 225 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhh---hhccCCChHHHHHHhcc---------CCccCCcCH
Confidence 99999999988754 35689999999999876431100 000 0111122111111 112346789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++++..++.... ....++++.+.++
T Consensus 226 ~~~a~~~~~l~~~~~-~~~~G~~~~~~~~ 253 (260)
T PRK06198 226 DEVARAVAFLLSDES-GLMTGSVIDFDQS 253 (260)
T ss_pred HHHHHHHHHHcChhh-CCccCceEeECCc
Confidence 999999998775332 2234778888765
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.6e-13 Score=132.17 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=140.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||++++++|++.|+ +|+++.|+... .+.+. ++. ..++.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA---RVAIVDIDADN---GAAVA-------------ASL--------GERARF 56 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------CCeeEE
Confidence 4789999999999999999999999996 45777776421 11111 111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc------ccCHHHHHHHHHHHHHHHHHHHHH-c-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF------DERYDVAFGINTLGAIHLVNFAKK-C-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~l 154 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+.. + .+-
T Consensus 57 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (261)
T PRK08265 57 IATDITD-------DAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGG 129 (261)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCC
Confidence 9999995 32233333 358999999996421 134667789999999999988754 2 233
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||........ ....|+.+
T Consensus 130 g~ii~isS~~~~~~~~--------------------------------------------------------~~~~Y~as 153 (261)
T PRK08265 130 GAIVNFTSISAKFAQT--------------------------------------------------------GRWLYPAS 153 (261)
T ss_pred cEEEEECchhhccCCC--------------------------------------------------------CCchhHHH
Confidence 5799999875432111 12469999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.. ..++.+..|+|+.+..+..+.... + ............ .....+...+|+|
T Consensus 154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~---~---~~~~~~~~~~~~--------~p~~r~~~p~dva 219 (261)
T PRK08265 154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSG---G---DRAKADRVAAPF--------HLLGRVGDPEEVA 219 (261)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcc---c---chhHHHHhhccc--------CCCCCccCHHHHH
Confidence 99998888754 357999999999876543211100 0 000000011000 0111245679999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++..++.... ..-.+.++.+.++
T Consensus 220 ~~~~~l~s~~~-~~~tG~~i~vdgg 243 (261)
T PRK08265 220 QVVAFLCSDAA-SFVTGADYAVDGG 243 (261)
T ss_pred HHHHHHcCccc-cCccCcEEEECCC
Confidence 99998875322 2223667777665
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-12 Score=131.41 Aligned_cols=170 Identities=12% Similarity=0.172 Sum_probs=113.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA-ALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+++||||||+||+++++.|++.|+ +|+++.|+...... ...+. ++ -+.++. . ..++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~l~-~~-----~~~~~~-~--------~~~~~ 65 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA---NIVIAAKTAEPHPKLPGTIH-TA-----AEEIEA-A--------GGQAL 65 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecccccccchhhHHH-HH-----HHHHHh-c--------CCceE
Confidence 4789999999999999999999999986 45788886543211 11111 00 111211 1 24678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|++++ ++ .+.++ ..+|+|||+||..... +.++..+++|+.|+.++++++...
T Consensus 66 ~~~~D~~~~------~~-i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 138 (273)
T PRK08278 66 PLVGDVRDE------DQ-VAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKK 138 (273)
T ss_pred EEEecCCCH------HH-HHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHh
Confidence 899999963 22 22333 3689999999975431 235667899999999999999653
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... +. .....|
T Consensus 139 ~~~g~iv~iss~~~~~~~--------~~----------------------------------------------~~~~~Y 164 (273)
T PRK08278 139 SENPHILTLSPPLNLDPK--------WF----------------------------------------------APHTAY 164 (273)
T ss_pred cCCCEEEEECCchhcccc--------cc----------------------------------------------CCcchh
Confidence 122467888764311000 00 123679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccc
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTI 258 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsi 258 (570)
+.||+..|.+++.+ ..++.++.+.|+.
T Consensus 165 ~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 165 TMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 99999999998865 3478999999984
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.3e-13 Score=130.23 Aligned_cols=215 Identities=14% Similarity=0.143 Sum_probs=134.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|.+ |+++.|+... ..+.+. ++ .++.+
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~l~-------------~~----------~~~~~ 55 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGAN---VRFTYAGSKD--AAERLA-------------QE----------TGATA 55 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCCHH--HHHHHH-------------HH----------hCCeE
Confidence 57899999999999999999999999864 4555554221 111111 11 12467
Q ss_pred EEccCCCCCCCCChhhhHHHHh---CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-ccCceEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW---NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CVKLKVFV 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk~fV 158 (570)
+.+|+++ .+....++ ..+|++||+||..... +.++..+++|+.|+..++..+.. +++-.++|
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 128 (237)
T PRK12742 56 VQTDSAD-------RDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRII 128 (237)
T ss_pred EecCCCC-------HHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 7899985 22222333 3589999999975332 24577899999999999765544 43346899
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||...... +. .....|+.||+..
T Consensus 129 ~isS~~~~~~--------~~-----------------------------------------------~~~~~Y~~sKaa~ 153 (237)
T PRK12742 129 IIGSVNGDRM--------PV-----------------------------------------------AGMAAYAASKSAL 153 (237)
T ss_pred EEeccccccC--------CC-----------------------------------------------CCCcchHHhHHHH
Confidence 9999654210 00 1245799999999
Q ss_pred HHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 239 EMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
|.+++.. ..++.+.+++|+.|..+... .. . ... ....... + ..-+...+++++++.
T Consensus 154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~---~~-----~--~~~-~~~~~~~---~-----~~~~~~p~~~a~~~~ 214 (237)
T PRK12742 154 QGMARGLARDFGPRGITINVVQPGPIDTDANP---AN-----G--PMK-DMMHSFM---A-----IKRHGRPEEVAGMVA 214 (237)
T ss_pred HHHHHHHHHHHhhhCeEEEEEecCcccCCccc---cc-----c--HHH-HHHHhcC---C-----CCCCCCHHHHHHHHH
Confidence 9988764 45799999999998765321 10 0 000 1111111 1 112356789999988
Q ss_pred HHHHHhcCCCCCCceEEeccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++.... ..-.+.++.+.++
T Consensus 215 ~l~s~~~-~~~~G~~~~~dgg 234 (237)
T PRK12742 215 WLAGPEA-SFVTGAMHTIDGA 234 (237)
T ss_pred HHcCccc-CcccCCEEEeCCC
Confidence 8775322 2223566666543
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-12 Score=127.76 Aligned_cols=214 Identities=18% Similarity=0.164 Sum_probs=136.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++||||||||+||+++++.|++.|+ +|+++.|+... .+++.+++ .. ..++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~----------~~~~~~ 57 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGA---QVCINSRNENK---LKRMKKTL---------SK----------YGNIHY 57 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh----------cCCeEE
Confidence 3689999999999999999999999996 45788886422 11221111 00 135788
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCcc-----cCHHHHHHHHHHHHHHHHHHHHHc-cCceE
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKFD-----ERYDVAFGINTLGAIHLVNFAKKC-VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f~-----~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~ 156 (570)
+.+|++++ +..+.+ ...+|.+||+|+..... +.++..+++|+.++..+++.+..+ .+-.+
T Consensus 58 ~~~Dl~~~-------~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (238)
T PRK05786 58 VVGDVSST-------ESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSS 130 (238)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCE
Confidence 99999963 222232 23579999999864321 234566899999998888877654 22257
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
||++||....... . .....|+.+|+
T Consensus 131 iv~~ss~~~~~~~--------~-----------------------------------------------~~~~~Y~~sK~ 155 (238)
T PRK05786 131 IVLVSSMSGIYKA--------S-----------------------------------------------PDQLSYAVAKA 155 (238)
T ss_pred EEEEecchhcccC--------C-----------------------------------------------CCchHHHHHHH
Confidence 8888886432100 0 12346999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+.+++.. ..+++++++||+.|+++.. +...|. . ... .....++.++++++
T Consensus 156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~-~~~~~~---------------~-~~~------~~~~~~~~~~va~~ 212 (238)
T PRK05786 156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFE-PERNWK---------------K-LRK------LGDDMAPPEDFAKV 212 (238)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC-chhhhh---------------h-hcc------ccCCCCCHHHHHHH
Confidence 888776654 3589999999999988632 100110 0 000 01135788999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++..... ...+..+.+.++
T Consensus 213 ~~~~~~~~~~-~~~g~~~~~~~~ 234 (238)
T PRK05786 213 IIWLLTDEAD-WVDGVVIPVDGG 234 (238)
T ss_pred HHHHhccccc-CccCCEEEECCc
Confidence 9988863221 223566665443
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-12 Score=130.14 Aligned_cols=226 Identities=12% Similarity=0.139 Sum_probs=140.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|++|||||||+||+++++.|++.|+. |+++.|+ .. .+.+.+++ ++. ..++.+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~---vi~~~r~-~~---~~~~~~~~---------~~~---------~~~~~~ 58 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAY---VLAVDIA-EA---VSETVDKI---------KSN---------GGKAKA 58 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCc-HH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 57899999999999999999999999964 5677776 21 11111111 110 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... . +.++..+++|+.|+..+++.+... +
T Consensus 59 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (272)
T PRK08589 59 YHVDISDE-------QQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMME 131 (272)
T ss_pred EEeecCCH-------HHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999953 2222333 358999999997532 1 235667889999998887776542 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||...+... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (272)
T PRK08589 132 QGGSIINTSSFSGQAAD--------------------------------------------------------LYRSGYN 155 (272)
T ss_pred cCCEEEEeCchhhcCCC--------------------------------------------------------CCCchHH
Confidence 11589999987644221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++.+..+.|+.|..+..+...+..+ ..+...+.. ..... ....-+...++
T Consensus 156 asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-----~~~~~~~~~-~~~~~----~~~~~~~~~~~ 225 (272)
T PRK08589 156 AAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE-----DEAGKTFRE-NQKWM----TPLGRLGKPEE 225 (272)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch-----hhHHHHHhh-hhhcc----CCCCCCcCHHH
Confidence 9999999988765 457999999999987653321111000 000000000 00000 01112457899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.+.++.+.++
T Consensus 226 va~~~~~l~s~~~~-~~~G~~i~vdgg 251 (272)
T PRK08589 226 VAKLVVFLASDDSS-FITGETIRIDGG 251 (272)
T ss_pred HHHHHHHHcCchhc-CcCCCEEEECCC
Confidence 99999887753322 223667777665
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7e-13 Score=132.87 Aligned_cols=162 Identities=15% Similarity=0.094 Sum_probs=114.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+||||||||+||++++++|+++|. +|+++.|+... .+.+.+ +.+ ..++.++.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~-------------~~~-------~~~~~~~~~ 55 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW---RVGAYDINEAG---LAALAA-------------ELG-------AGNAWTGAL 55 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCHHH---HHHHHH-------------Hhc-------CCceEEEEe
Confidence 6899999999999999999999986 45677776432 111111 110 146889999
Q ss_pred cCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 93 DISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
|++++ +..+.++ .++|+|||+||..... +.++..+++|+.|+..+++++... .+.
T Consensus 56 D~~~~-------~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 128 (260)
T PRK08267 56 DVTDR-------AAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG 128 (260)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC
Confidence 99953 2222332 3579999999975421 345677999999999999988542 245
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||........ ..+.|+.|
T Consensus 129 ~~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~~s 152 (260)
T PRK08267 129 ARVINTSSASAIYGQP--------------------------------------------------------GLAVYSAT 152 (260)
T ss_pred CEEEEeCchhhCcCCC--------------------------------------------------------CchhhHHH
Confidence 7899999975432211 13579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
|+..|.++... ..++++.+++|+.+....
T Consensus 153 Kaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 153 KFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 99988887764 357999999999986643
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=130.55 Aligned_cols=168 Identities=15% Similarity=0.228 Sum_probs=118.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||+++++.|++.|. +|+++.|+... .+.+.. .++.. ..++.+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~---~Vi~~~r~~~~---~~~~~~---------~l~~~---------~~~~~~ 62 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA---KVVLASRRVER---LKELRA---------EIEAE---------GGAAHV 62 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhc---------CCcEEE
Confidence 5789999999999999999999999885 46788886422 111111 11111 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|++++ ++ .+.+++ .+|+|||+|+..... +.++..+++|+.|+..+++.+... .
T Consensus 63 ~~~D~~~~------~~-~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 135 (258)
T PRK06949 63 VSLDVTDY------QS-IKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIAR 135 (258)
T ss_pred EEecCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc
Confidence 99999953 22 234333 589999999964321 346677899999999999877531 0
Q ss_pred C--------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccccc
Q 008315 153 K--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKI 224 (570)
Q Consensus 153 ~--------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
. -.++|++||.......
T Consensus 136 ~~~~~~~~~~g~iv~~sS~~~~~~~------------------------------------------------------- 160 (258)
T PRK06949 136 AKGAGNTKPGGRIINIASVAGLRVL------------------------------------------------------- 160 (258)
T ss_pred CCcCCCCCCCeEEEEECcccccCCC-------------------------------------------------------
Confidence 1 2589999987654221
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCC
Q 008315 225 HGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
...+.|+.+|+..|.+++.. ..++++++++|+.|.++..
T Consensus 161 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 -PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 12467999999999988764 3479999999999987653
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.9e-12 Score=126.52 Aligned_cols=223 Identities=15% Similarity=0.222 Sum_probs=142.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||+.++++|++.|++ |+++.|+... .+.+.+ .++...| ..++.+
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~~~~ 64 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGAD---VLIVARDADA---LAQARD---------ELAEEFP-------EREVHG 64 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHH---------HHHhhCC-------CCeEEE
Confidence 47899999999999999999999999964 5777885421 111111 1221111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.+ ...+|+|||+||.... .+.++..+.+|+.|+..+++++.. + .
T Consensus 65 ~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 137 (257)
T PRK09242 65 LAADVSDD-------EDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH 137 (257)
T ss_pred EECCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 99999953 222222 2468999999997422 234677899999999999998753 1 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 138 ~~~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 161 (257)
T PRK09242 138 ASSAIVNIGSVSGLTHV--------------------------------------------------------RSGAPYG 161 (257)
T ss_pred CCceEEEECccccCCCC--------------------------------------------------------CCCcchH
Confidence 44789999998665322 1235699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..+++++.++|+.|.++.... +..+ ..+........ ...-+...++
T Consensus 162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~---~~~~----~~~~~~~~~~~---------~~~~~~~~~~ 225 (257)
T PRK09242 162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG---PLSD----PDYYEQVIERT---------PMRRVGEPEE 225 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccc---ccCC----hHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999888754 357999999999997765421 2111 11111111110 0111335689
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++..++..... .-.++++++.++
T Consensus 226 va~~~~~l~~~~~~-~~~g~~i~~~gg 251 (257)
T PRK09242 226 VAAAVAFLCMPAAS-YITGQCIAVDGG 251 (257)
T ss_pred HHHHHHHHhCcccc-cccCCEEEECCC
Confidence 99998887742221 123566666543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-12 Score=126.81 Aligned_cols=213 Identities=15% Similarity=0.083 Sum_probs=136.8
Q ss_pred EEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCC
Q 008315 16 LVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDIS 95 (570)
Q Consensus 16 lITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~ 95 (570)
+||||||+||++++++|++.|+. |+++.|+... .+.+.++ +++ ..+++++.+|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~---------~~~----------~~~~~~~~~Dl~ 55 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR---VTIASRSRDR---LAAAARA---------LGG----------GAPVRTAALDIT 55 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH---------Hhc----------CCceEEEEccCC
Confidence 69999999999999999999864 5777875321 1111100 100 146788999999
Q ss_pred CCCCCCChhhhHHHHhC---CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 96 SEDLGLKDSNLKEELWN---ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 96 ~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
+ .+..+.+++ .+|++||+|+.... .+.++..+++|+.++..++++.. +.+..++|++||...
T Consensus 56 ~-------~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~g~iv~~ss~~~ 127 (230)
T PRK07041 56 D-------EAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-IAPGGSLTFVSGFAA 127 (230)
T ss_pred C-------HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh-hcCCeEEEEECchhh
Confidence 5 333345554 48999999987432 13466778999999999999544 446689999998876
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+... ...+.|+.+|+..|.+++..
T Consensus 128 ~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~~~l 151 (230)
T PRK07041 128 VRPS--------------------------------------------------------ASGVLQGAINAALEALARGL 151 (230)
T ss_pred cCCC--------------------------------------------------------CcchHHHHHHHHHHHHHHHH
Confidence 5321 12457999999999998765
Q ss_pred ---cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 246 ---KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 ---~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..++.++.++|+.+-++.....+ .. ....++....... +. .-....+|+|+++..++.. .
T Consensus 152 a~e~~~irv~~i~pg~~~t~~~~~~~---~~--~~~~~~~~~~~~~----~~-----~~~~~~~dva~~~~~l~~~---~ 214 (230)
T PRK07041 152 ALELAPVRVNTVSPGLVDTPLWSKLA---GD--AREAMFAAAAERL----PA-----RRVGQPEDVANAILFLAAN---G 214 (230)
T ss_pred HHHhhCceEEEEeecccccHHHHhhh---cc--chHHHHHHHHhcC----CC-----CCCcCHHHHHHHHHHHhcC---C
Confidence 23478899999887554321100 00 0111121111111 10 0123568999999988752 2
Q ss_pred CCCCceEEeccC
Q 008315 323 PSDANIYHVGSS 334 (570)
Q Consensus 323 ~~~~~iyn~~s~ 334 (570)
...+++|++.++
T Consensus 215 ~~~G~~~~v~gg 226 (230)
T PRK07041 215 FTTGSTVLVDGG 226 (230)
T ss_pred CcCCcEEEeCCC
Confidence 233788998876
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.1e-12 Score=128.49 Aligned_cols=196 Identities=15% Similarity=0.202 Sum_probs=129.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||||+|+||+.++++|+++|+. |+++.|+... .+.+.+++ +. ..++.++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~-----------~~--------~~~~~~~ 58 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR---LLLVGRNAEK---LEALAARL-----------PY--------PGRHRWV 58 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHH-----------hc--------CCceEEE
Confidence 6899999999999999999999999964 5788886321 11111111 01 2478899
Q ss_pred EccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 91 AGDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
.+|++++ +..+.++ ..+|+|||+||...+. +.++..+++|+.|+.++++.+... .+.
T Consensus 59 ~~D~~d~-------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 131 (263)
T PRK09072 59 VADLTSE-------AGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS 131 (263)
T ss_pred EccCCCH-------HHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence 9999953 2222332 4689999999986432 235667889999999999988642 133
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... .....|+.|
T Consensus 132 ~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 155 (263)
T PRK09072 132 AMVVNVGSTFGSIGY--------------------------------------------------------PGYASYCAS 155 (263)
T ss_pred CEEEEecChhhCcCC--------------------------------------------------------CCccHHHHH
Confidence 578888886543211 113569999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+++.. ..++.++.+.|+.+.++...+...+ .. .........++++|
T Consensus 156 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~---------------------~~--~~~~~~~~~~~~va 212 (263)
T PRK09072 156 KFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA---------------------LN--RALGNAMDDPEDVA 212 (263)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc---------------------cc--ccccCCCCCHHHHH
Confidence 99877766543 4578899999988765432110000 00 00011356889999
Q ss_pred HHHHHHHH
Q 008315 310 NAMIVAMV 317 (570)
Q Consensus 310 ~aii~a~~ 317 (570)
++++.++.
T Consensus 213 ~~i~~~~~ 220 (263)
T PRK09072 213 AAVLQAIE 220 (263)
T ss_pred HHHHHHHh
Confidence 99998886
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4e-12 Score=127.14 Aligned_cols=197 Identities=14% Similarity=0.127 Sum_probs=126.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||||||+||++++++|+++|. .+|+++.|+.... .+.+.+++ +.. + ..+++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg--~~V~~~~r~~~~~--~~~~~~~l---------~~~-~-------~~~v~~~ 65 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP--ARVVLAALPDDPR--RDAAVAQM---------KAA-G-------ASSVEVI 65 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC--CeEEEEeCCcchh--HHHHHHHH---------Hhc-C-------CCceEEE
Confidence 578999999999999999999999852 2457888875431 11111111 111 0 1368899
Q ss_pred EccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCCcc----cCH---HHHHHHHHHHHHHH----HHHHHHccCceEE
Q 008315 91 AGDISSEDLGLKDSNLKEELW--NELDVMVNSAAITKFD----ERY---DVAFGINTLGAIHL----VNFAKKCVKLKVF 157 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~f~----~~~---~~~~~~Nv~gt~~l----l~~a~~~~~lk~f 157 (570)
.+|+++++- -++..+.+. .++|++||+||..... +.. .+.+++|+.|+..+ +.++++. +..++
T Consensus 66 ~~D~~~~~~---~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~i 141 (253)
T PRK07904 66 DFDALDTDS---HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQI 141 (253)
T ss_pred EecCCChHH---HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceE
Confidence 999996320 011122333 3699999999875321 111 24589999998875 4444443 56799
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....... .....|+.||+.
T Consensus 142 v~isS~~g~~~~--------------------------------------------------------~~~~~Y~~sKaa 165 (253)
T PRK07904 142 IAMSSVAGERVR--------------------------------------------------------RSNFVYGSTKAG 165 (253)
T ss_pred EEEechhhcCCC--------------------------------------------------------CCCcchHHHHHH
Confidence 999997542111 112459999998
Q ss_pred HHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 238 GEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.+.+.+.. ..++++++++|+.|..+... . .. .. ...++.+++|+.+
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-------~---------------~~---~~----~~~~~~~~~A~~i 216 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-------H---------------AK---EA----PLTVDKEDVAKLA 216 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-------c---------------CC---CC----CCCCCHHHHHHHH
Confidence 88665443 45899999999998764221 0 00 00 0146889999999
Q ss_pred HHHHH
Q 008315 313 IVAMV 317 (570)
Q Consensus 313 i~a~~ 317 (570)
+.++.
T Consensus 217 ~~~~~ 221 (253)
T PRK07904 217 VTAVA 221 (253)
T ss_pred HHHHH
Confidence 98886
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.3e-13 Score=126.45 Aligned_cols=267 Identities=18% Similarity=0.212 Sum_probs=184.3
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
..|-..|..||||-||.=|+.|+|-||..|++| +.++|..+.-. ..|++ .+..++.- .....
T Consensus 23 ~~~r~rkvALITGItGQDGSYLaEfLL~KgYeV---HGiiRRsSsFN-T~RIe-HlY~nP~~-------------h~~~~ 84 (376)
T KOG1372|consen 23 GAFRPRKVALITGITGQDGSYLAEFLLSKGYEV---HGIIRRSSSFN-TARIE-HLYSNPHT-------------HNGAS 84 (376)
T ss_pred cCcccceEEEEecccCCCchHHHHHHHhCCcee---eEEEeeccccc-hhhhh-hhhcCchh-------------cccce
Confidence 344445688999999999999999999999876 67788765543 24554 34333210 01245
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccC----CcccCHHHHHHHHHHHHHHHHHHHHHcc--CceEEE
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAIT----KFDERYDVAFGINTLGAIHLVNFAKKCV--KLKVFV 158 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v----~f~~~~~~~~~~Nv~gt~~ll~~a~~~~--~lk~fV 158 (570)
.....||+++ ...+-+++. +++-|+|+||.. +|+- .+...++...||.++|++.+.|. +--+|-
T Consensus 85 mkLHYgDmTD-------ss~L~k~I~~ikPtEiYnLaAQSHVkvSFdl-peYTAeVdavGtLRlLdAi~~c~l~~~VrfY 156 (376)
T KOG1372|consen 85 MKLHYGDMTD-------SSCLIKLISTIKPTEVYNLAAQSHVKVSFDL-PEYTAEVDAVGTLRLLDAIRACRLTEKVRFY 156 (376)
T ss_pred eEEeeccccc-------hHHHHHHHhccCchhhhhhhhhcceEEEeec-ccceeeccchhhhhHHHHHHhcCcccceeEE
Confidence 7889999994 444446665 578999999975 3543 23345778889999999999883 225799
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
..||...||. +.|.|-.|..|. .+.++|+.+|..+
T Consensus 157 QAstSElyGk----v~e~PQsE~TPF-----------------------------------------yPRSPYa~aKmy~ 191 (376)
T KOG1372|consen 157 QASTSELYGK----VQEIPQSETTPF-----------------------------------------YPRSPYAAAKMYG 191 (376)
T ss_pred ecccHhhccc----ccCCCcccCCCC-----------------------------------------CCCChhHHhhhhh
Confidence 9999999974 335555554544 3568999999998
Q ss_pred HHHHHHhcC--CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCce-eecCCCceeecchHHHHHHHHHHH
Q 008315 239 EMIMQQSKE--NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPC-LVGETKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 239 E~~v~~~~~--~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~-~~~~~~~~~d~VpVDdva~aii~a 315 (570)
-.++..++. ++=.| -+|.+- .+.|--|-.---+.++.-+..+..|.... ..|+-+..+||-+..|-++||...
T Consensus 192 ~WivvNyREAYnmfAc---NGILFN-HESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~m 267 (376)
T KOG1372|consen 192 YWIVVNYREAYNMFAC---NGILFN-HESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLM 267 (376)
T ss_pred eEEEEEhHHhhcceee---ccEeec-CCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHH
Confidence 887765522 22111 133332 33344442222245566666666666543 468899999999999999999988
Q ss_pred HHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 316 ~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+.+.. +.=|-+.++ ...+.+|+++..+.+.|+.
T Consensus 268 LQ~d~-----PdDfViATg--e~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 268 LQQDS-----PDDFVIATG--EQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred HhcCC-----CCceEEecC--CcccHHHHHHHHHHhhCcE
Confidence 86432 345888888 8899999999999888864
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.1e-12 Score=124.26 Aligned_cols=217 Identities=13% Similarity=0.112 Sum_probs=134.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|++|||||||+||++++++|++.|+. ++++.|+.. ...+.+.++ +.. ...++.++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~---v~~~~r~~~--~~~~~~~~~---------~~~---------~~~~~~~~~~ 57 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR---VAANCGPNE--ERAEAWLQE---------QGA---------LGFDFRVVEG 57 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCH--HHHHHHHHH---------HHh---------hCCceEEEEe
Confidence 68999999999999999999999864 467777321 111111100 000 0246889999
Q ss_pred cCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHHc---cCce
Q 008315 93 DISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKKC---VKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk 155 (570)
|++++ +..+.+ ...+|+|||+||.... . +.++..+++|+.++..+++.+... .+..
T Consensus 58 D~~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 130 (242)
T TIGR01829 58 DVSSF-------ESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG 130 (242)
T ss_pred cCCCH-------HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc
Confidence 99953 222222 2458999999997532 1 235667899999988866655321 2567
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||....... .....|+.+|
T Consensus 131 ~iv~iss~~~~~~~--------------------------------------------------------~~~~~y~~sk 154 (242)
T TIGR01829 131 RIINISSVNGQKGQ--------------------------------------------------------FGQTNYSAAK 154 (242)
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------CCcchhHHHH
Confidence 89999997543211 1135699999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+++.. ..+++++.++|+.+.++...+.+ ..++..+..+. ....+...+++++
T Consensus 155 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~~~a~ 216 (242)
T TIGR01829 155 AGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR---------EDVLNSIVAQI---------PVGRLGRPEEIAA 216 (242)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc---------hHHHHHHHhcC---------CCCCCcCHHHHHH
Confidence 9777766543 35899999999999876432211 11111111111 1112455688999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++..++..... .-.++++.+.++
T Consensus 217 ~~~~l~~~~~~-~~~G~~~~~~gg 239 (242)
T TIGR01829 217 AVAFLASEEAG-YITGATLSINGG 239 (242)
T ss_pred HHHHHcCchhc-CccCCEEEecCC
Confidence 88766543221 224678877765
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.2e-12 Score=127.16 Aligned_cols=222 Identities=17% Similarity=0.160 Sum_probs=159.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||+|++++++|+++|++ |.+++|+....... ...+.++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~---v~~~~r~~~~~~~~----------------------------~~~v~~~~~ 49 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHE---VRAAVRNPEAAAAL----------------------------AGGVEVVLG 49 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCE---EEEEEeCHHHHHhh----------------------------cCCcEEEEe
Confidence 47999999999999999999999854 57889976443211 146899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+.+ ...+...+++++.++++.+... .+. ........+..+..+.+. .+.++++++|.......
T Consensus 50 d~~~-------~~~l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~~~~---- 113 (275)
T COG0702 50 DLRD-------PKSLVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGADAA---- 113 (275)
T ss_pred ccCC-------HhHHHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCCCCC----
Confidence 9994 4445588899999999999876 444 223444555555555554 26788898887765321
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
.+..|..+|..+|+++.+ .+++.+
T Consensus 114 ------------------------------------------------------~~~~~~~~~~~~e~~l~~--sg~~~t 137 (275)
T COG0702 114 ------------------------------------------------------SPSALARAKAAVEAALRS--SGIPYT 137 (275)
T ss_pred ------------------------------------------------------CccHHHHHHHHHHHHHHh--cCCCeE
Confidence 245789999999999998 899999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
++||+..+...... ........+......+ ......+.++|++.++..++.... ..+.+|.++
T Consensus 138 ~lr~~~~~~~~~~~------------~~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~---~~~~~~~l~ 200 (275)
T COG0702 138 TLRRAAFYLGAGAA------------FIEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPA---TAGRTYELA 200 (275)
T ss_pred EEecCeeeeccchh------------HHHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCc---ccCcEEEcc
Confidence 99976665543210 0122233333222222 337899999999999988876332 347899999
Q ss_pred cCCCCcccHHhHHHHHhhhcccCC
Q 008315 333 SSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 333 s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++ ...+..++.+.+.+..++..
T Consensus 201 g~--~~~~~~~~~~~l~~~~gr~~ 222 (275)
T COG0702 201 GP--EALTLAELASGLDYTIGRPV 222 (275)
T ss_pred CC--ceecHHHHHHHHHHHhCCcc
Confidence 98 88999999999999888753
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-12 Score=129.09 Aligned_cols=222 Identities=16% Similarity=0.147 Sum_probs=141.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.|. +|+++.|+.+. .+++.+++ .+ . ..++..
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~---~v~~~~r~~~~---~~~~~~~~---------~~-~--------~~~~~~ 60 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA---KVVVADRDAAG---GEETVALI---------RE-A--------GGEALF 60 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHHH---------Hh-c--------CCceEE
Confidence 5789999999999999999999999985 45778886532 11222111 11 0 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
+.+|++++ +..+.++ ..+|+|||+||... +. +.++..+++|+.++..+++.+.. +
T Consensus 61 ~~~D~~~~-------~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 133 (253)
T PRK06172 61 VACDVTRD-------AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA 133 (253)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999953 2223333 35799999999642 11 34566789999999887765432 1
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+.... ....|
T Consensus 134 ~~~~~ii~~sS~~~~~~~~--------------------------------------------------------~~~~Y 157 (253)
T PRK06172 134 QGGGAIVNTASVAGLGAAP--------------------------------------------------------KMSIY 157 (253)
T ss_pred cCCcEEEEECchhhccCCC--------------------------------------------------------CCchh
Confidence 2346899999976653221 23579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.. ..++.+.++.|+.|-.+..++... ..... ........ ....+...+
T Consensus 158 ~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~-~~~~~~~~--------~~~~~~~p~ 222 (253)
T PRK06172 158 AASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE------ADPRK-AEFAAAMH--------PVGRIGKVE 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc------cChHH-HHHHhccC--------CCCCccCHH
Confidence 99999998887664 357999999999986654332211 00111 11111111 011245679
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++.++..... .-.|.++++.++
T Consensus 223 ~ia~~~~~l~~~~~~-~~~G~~i~~dgg 249 (253)
T PRK06172 223 EVASAVLYLCSDGAS-FTTGHALMVDGG 249 (253)
T ss_pred HHHHHHHHHhCcccc-CcCCcEEEECCC
Confidence 999998888754322 223677777665
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-12 Score=132.49 Aligned_cols=185 Identities=12% Similarity=0.112 Sum_probs=115.6
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+.+ +++|+|+||||||+||++++++|++.|+ +|+++.|+.... +... +.+.+..+ ..
T Consensus 11 ~~~-~~~k~vlItGas~gIG~~~a~~l~~~G~---~vi~~~r~~~~~---~~~~---------~~l~~~~~-------~~ 67 (306)
T PRK06197 11 IPD-QSGRVAVVTGANTGLGYETAAALAAKGA---HVVLAVRNLDKG---KAAA---------ARITAATP-------GA 67 (306)
T ss_pred ccc-CCCCEEEEcCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHHhCC-------CC
Confidence 344 4789999999999999999999999986 457778864221 1111 11111111 14
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----ccCHHHHHHHHHHH----HHHHHHHHH
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----DERYDVAFGINTLG----AIHLVNFAK 149 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----~~~~~~~~~~Nv~g----t~~ll~~a~ 149 (570)
++.++.+|++++ +..+.++ .++|+|||+||.... .+.++..+++|+.| +..+++.++
T Consensus 68 ~~~~~~~Dl~d~-------~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~ 140 (306)
T PRK06197 68 DVTLQELDLTSL-------ASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLL 140 (306)
T ss_pred ceEEEECCCCCH-------HHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 678899999953 2223333 358999999997532 23456778999999 555666555
Q ss_pred HccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 150 ~~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+. +..++|++||........-..++.... .+ .....
T Consensus 141 ~~-~~~~iV~vSS~~~~~~~~~~~~~~~~~--~~-----------------------------------------~~~~~ 176 (306)
T PRK06197 141 PV-PGSRVVTVSSGGHRIRAAIHFDDLQWE--RR-----------------------------------------YNRVA 176 (306)
T ss_pred hC-CCCEEEEECCHHHhccCCCCccccCcc--cC-----------------------------------------CCcHH
Confidence 54 447999999976432111000000000 00 02346
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEE--EeccccccCCC
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVI--IRPTIVSGTYK 264 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~I--vRPsiV~g~~~ 264 (570)
.|+.||+..+.+.... ..++++.+ +.||.|..+..
T Consensus 177 ~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 177 AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 7999999999888764 23555544 47998876543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=130.41 Aligned_cols=213 Identities=15% Similarity=0.085 Sum_probs=139.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||+++++.|++.|. +|+++.|+... . . ...++.+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~---~v~~~~r~~~~-------~--------------~--------~~~~~~~ 51 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGA---TVVVCGRRAPE-------T--------------V--------DGRPAEF 51 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCChhh-------h--------------h--------cCCceEE
Confidence 5789999999999999999999999986 45777886422 0 0 0246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+.. +.
T Consensus 52 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 124 (252)
T PRK07856 52 HAADVRD-------PDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQ 124 (252)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 32233443 3579999999964321 23567789999999999998865 21
Q ss_pred -CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 -~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..++|++||....... .....|
T Consensus 125 ~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 148 (252)
T PRK07856 125 PGGGSIVNIGSVSGRRPS--------------------------------------------------------PGTAAY 148 (252)
T ss_pred CCCcEEEEEcccccCCCC--------------------------------------------------------CCCchh
Confidence 23589999997654221 123679
Q ss_pred HHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 232 VFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 232 ~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
+.||+..|.+++.. ...+.+..++|+.|..+..... +.+ ......+..+. + ...+...++
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~--~~~-----~~~~~~~~~~~----~-----~~~~~~p~~ 212 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELH--YGD-----AEGIAAVAATV----P-----LGRLATPAD 212 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhh--ccC-----HHHHHHHhhcC----C-----CCCCcCHHH
Confidence 99999999998765 2348899999998876532110 000 01111111111 0 112356789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... .--.+.++.+.++
T Consensus 213 va~~~~~L~~~~~-~~i~G~~i~vdgg 238 (252)
T PRK07856 213 IAWACLFLASDLA-SYVSGANLEVHGG 238 (252)
T ss_pred HHHHHHHHcCccc-CCccCCEEEECCC
Confidence 9999888774322 2234677777665
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-12 Score=131.81 Aligned_cols=217 Identities=20% Similarity=0.184 Sum_probs=136.2
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|++.|.. |++..|.... ..+.+.+++ +.. ..++.
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~---Vv~~~~~~~~--~~~~~~~~i---------~~~---------g~~~~ 65 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGAT---VVVNDVASAL--DASDVLDEI---------RAA---------GAKAV 65 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCchh--HHHHHHHHH---------Hhc---------CCeEE
Confidence 368999999999999999999999999964 4555554221 112222111 111 24678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c-C
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V-K 153 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~ 153 (570)
.+.+|++++ +..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++.+... . +
T Consensus 66 ~~~~Dv~d~-------~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 138 (306)
T PRK07792 66 AVAGDISQR-------ATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAK 138 (306)
T ss_pred EEeCCCCCH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 899999953 2233333 468999999998643 1346677899999999999987531 1 0
Q ss_pred --------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 154 --------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 154 --------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
-.++|++||.......
T Consensus 139 ~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------------- 162 (306)
T PRK07792 139 AKAAGGPVYGRIVNTSSEAGLVGP-------------------------------------------------------- 162 (306)
T ss_pred hcccCCCCCcEEEEECCcccccCC--------------------------------------------------------
Confidence 1478999886543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+++.. ..++.+..+.|+. .....+ +.... ... . .....
T Consensus 163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~---~~~~~---~~~------------~---~~~~~ 220 (306)
T PRK07792 163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTA---DVFGD---APD------------V---EAGGI 220 (306)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhh---hhccc---cch------------h---hhhcc
Confidence 11346999999999988654 3579999999973 111000 00000 000 0 00112
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+.++.++|++++..++.... ....+++|.+.++
T Consensus 221 ~~~~pe~va~~v~~L~s~~~-~~~tG~~~~v~gg 253 (306)
T PRK07792 221 DPLSPEHVVPLVQFLASPAA-AEVNGQVFIVYGP 253 (306)
T ss_pred CCCCHHHHHHHHHHHcCccc-cCCCCCEEEEcCC
Confidence 34578999999887764322 2234778888765
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-12 Score=131.86 Aligned_cols=158 Identities=13% Similarity=0.213 Sum_probs=112.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||+++++.|++.|+ +|+++.|+... +. ++. ..++.++.+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~~------~~-~~~--------------------~~~~~~~~~ 51 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY---EVWATARKAED------VE-ALA--------------------AAGFTAVQL 51 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC---EEEEEeCCHHH------HH-HHH--------------------HCCCeEEEe
Confidence 6899999999999999999999986 45777776421 11 110 134678899
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cCceE
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VKLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~lk~ 156 (570)
|++++ ++ .+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+... ++..+
T Consensus 52 Dl~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~ 124 (274)
T PRK05693 52 DVNDG------AA-LARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGL 124 (274)
T ss_pred eCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCE
Confidence 99952 22 23333 3689999999975322 346677899999999999887542 13367
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... .....|+.||+
T Consensus 125 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 148 (274)
T PRK05693 125 VVNIGSVSGVLVT--------------------------------------------------------PFAGAYCASKA 148 (274)
T ss_pred EEEECCccccCCC--------------------------------------------------------CCccHHHHHHH
Confidence 8999886543211 12357999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
..|.+.... ..++.+++++|+.|.++.
T Consensus 149 al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 149 AVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 988877653 358999999999997653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.5e-12 Score=131.07 Aligned_cols=200 Identities=14% Similarity=0.170 Sum_probs=130.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|.+ |+++.|+... .+.+.+++ ++ . ..++.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~---Vvl~~R~~~~---l~~~~~~~---------~~-~--------g~~~~~ 60 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGAR---LVLAARDEEA---LQAVAEEC---------RA-L--------GAEVLV 60 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHH---------Hh-c--------CCcEEE
Confidence 46899999999999999999999999964 5677775422 22222111 11 1 246778
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||...+ . +.++..+++|+.|+.++.+.+.. + .
T Consensus 61 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~ 133 (330)
T PRK06139 61 VPTDVTD-------ADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ 133 (330)
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc
Confidence 8999995 33233443 468999999997533 2 33566799999999998887643 1 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 134 ~~g~iV~isS~~~~~~~--------------------------------------------------------p~~~~Y~ 157 (330)
T PRK06139 134 GHGIFINMISLGGFAAQ--------------------------------------------------------PYAAAYS 157 (330)
T ss_pred CCCEEEEEcChhhcCCC--------------------------------------------------------CCchhHH
Confidence 34579999887644221 1235799
Q ss_pred HHHHHHHH----HHHHhc--CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEM----IMQQSK--ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~----~v~~~~--~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+. +..+.. .++.++.+.|+.|.++..+. ..+.. +. .......+...+
T Consensus 158 asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~----~~~~~-----------~~------~~~~~~~~~~pe 216 (330)
T PRK06139 158 ASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH----GANYT-----------GR------RLTPPPPVYDPR 216 (330)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc----ccccc-----------cc------cccCCCCCCCHH
Confidence 99996444 444443 37999999999997753211 11100 00 001112357889
Q ss_pred HHHHHHHHHHH
Q 008315 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
++|++++.++.
T Consensus 217 ~vA~~il~~~~ 227 (330)
T PRK06139 217 RVAKAVVRLAD 227 (330)
T ss_pred HHHHHHHHHHh
Confidence 99999998885
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-12 Score=127.76 Aligned_cols=227 Identities=15% Similarity=0.118 Sum_probs=136.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||+|+||.++++.|++.|+ +|+++.|+... .+++..++. . . ..++.++.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~~~~---------~-~--------~~~~~~~~ 57 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF---KVAIVDYNEET---AQAAADKLS---------K-D--------GGKAIAVK 57 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHH---------h-c--------CCeEEEEE
Confidence 68999999999999999999999986 45777776422 122221111 0 0 14678899
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc----cC
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC----VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~----~~ 153 (570)
+|++++ +..+.++ .++|+|||+||..... +.++..+++|+.|+..+++.+... +.
T Consensus 58 ~Dl~~~-------~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 130 (256)
T PRK08643 58 ADVSDR-------DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH 130 (256)
T ss_pred CCCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 999963 2222332 3689999999874321 235677899999998888777542 12
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 131 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 154 (256)
T PRK08643 131 GGKIINATSQAGVVGN--------------------------------------------------------PELAVYSS 154 (256)
T ss_pred CCEEEEECccccccCC--------------------------------------------------------CCCchhHH
Confidence 2578999886432111 01356999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-CccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+..|.+++.. ..++.++.++|+.|.++...... ...++............... .+ ...+...++
T Consensus 155 sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~ 226 (256)
T PRK08643 155 TKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD---IT-----LGRLSEPED 226 (256)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc---CC-----CCCCcCHHH
Confidence 999888777654 45799999999998775321000 00000000000000000000 11 113457899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++..... .-.+.++.+.++
T Consensus 227 va~~~~~L~~~~~~-~~~G~~i~vdgg 252 (256)
T PRK08643 227 VANCVSFLAGPDSD-YITGQTIIVDGG 252 (256)
T ss_pred HHHHHHHHhCcccc-CccCcEEEeCCC
Confidence 99998887753322 223677777654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.8e-12 Score=126.71 Aligned_cols=227 Identities=11% Similarity=0.084 Sum_probs=141.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|+. |+++.|+... .+++.+ .++. . ..++.+
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~---vv~~~~~~~~---~~~~~~---------~~~~-~--------~~~~~~ 63 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGAT---IVFNDINQEL---VDKGLA---------AYRE-L--------GIEAHG 63 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHH---HHHHHH---------HHHh-c--------CCceEE
Confidence 37899999999999999999999999864 4666665321 111111 1111 0 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 64 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 136 (265)
T PRK07097 64 YVCDVTD-------EDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK 136 (265)
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 33233333 348999999997542 134566789999999988887754 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (265)
T PRK07097 137 GHGKIINICSMMSELGR--------------------------------------------------------ETVSAYA 160 (265)
T ss_pred CCcEEEEEcCccccCCC--------------------------------------------------------CCCccHH
Confidence 45789999986432111 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+|+..+.+++.+ ..++.++.|+|+.|.++...+...-... .....+. ...... . ....+...+|
T Consensus 161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~-~~~~~~---~-----~~~~~~~~~d 230 (265)
T PRK07097 161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQAD-GSRHPFD-QFIIAK---T-----PAARWGDPED 230 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhcccc-ccchhHH-HHHHhc---C-----CccCCcCHHH
Confidence 9999999988765 3479999999999987654322110000 0000010 000000 0 0112456789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ..-.+.++.+.++
T Consensus 231 va~~~~~l~~~~~-~~~~g~~~~~~gg 256 (265)
T PRK07097 231 LAGPAVFLASDAS-NFVNGHILYVDGG 256 (265)
T ss_pred HHHHHHHHhCccc-CCCCCCEEEECCC
Confidence 9999998876422 1223567777665
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.3e-12 Score=125.28 Aligned_cols=163 Identities=18% Similarity=0.163 Sum_probs=111.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||+|+||+++++.|++.|. +|+++.|+... .+.+.++ ++.. ..++..+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~---~v~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~~~~ 56 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF---AVAVADLNEET---AKETAKE---------INQA---------GGKAVAYKL 56 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEEEEc
Confidence 5899999999999999999999885 45677775321 1111111 1110 246788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc----cCc
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC----VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~----~~l 154 (570)
|+++ ++....++ ..+|+|||+|+..... +.++..+++|+.++..+++.+... ..-
T Consensus 57 Dl~~-------~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 129 (254)
T TIGR02415 57 DVSD-------KDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHG 129 (254)
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCC
Confidence 9995 33233332 3579999999975321 335677899999999887766531 123
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... ...+.|+.+
T Consensus 130 ~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 153 (254)
T TIGR02415 130 GKIINAASIAGHEGN--------------------------------------------------------PILSAYSST 153 (254)
T ss_pred eEEEEecchhhcCCC--------------------------------------------------------CCCcchHHH
Confidence 689999986543221 113579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
|+..|.+++.. ..++.+.+++|+.+..+
T Consensus 154 K~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 154 KFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 99999988754 34799999999988654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.1e-12 Score=127.13 Aligned_cols=222 Identities=16% Similarity=0.127 Sum_probs=138.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||.+++++|++.|+. |+++.|+.... +...+++ ... ..++.+
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~---V~~~~r~~~~~---~~~~~~~---------~~~---------~~~~~~ 62 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGAN---VAVASRSQEKV---DAAVAQL---------QQA---------GPEGLG 62 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHHHHH---------HHh---------CCceEE
Confidence 58999999999999999999999998864 57777864321 1111111 110 135678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c-C
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V-K 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~ 153 (570)
+.+|+++ ++..+.++ ..+|+|||+|+.... .+.++..+++|+.|+.++++.+... . .
T Consensus 63 ~~~Dv~~-------~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~ 135 (264)
T PRK07576 63 VSADVRD-------YAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP 135 (264)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 8999995 33233333 357999999985321 1335667899999999999988642 1 1
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 136 ~g~iv~iss~~~~~~~--------------------------------------------------------~~~~~Y~a 159 (264)
T PRK07576 136 GASIIQISAPQAFVPM--------------------------------------------------------PMQAHVCA 159 (264)
T ss_pred CCEEEEECChhhccCC--------------------------------------------------------CCccHHHH
Confidence 2589999997543211 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.. ..++.++.++|+.+.++.. ...+... ......+.. . . .........|+
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~--~~~~~~~----~~~~~~~~~-~---~-----~~~~~~~~~dv 224 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG--MARLAPS----PELQAAVAQ-S---V-----PLKRNGTKQDI 224 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH--HhhcccC----HHHHHHHHh-c---C-----CCCCCCCHHHH
Confidence 999999988764 3578999999998865321 1111111 000001111 1 1 11234678999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++.... ..-.+....+.++
T Consensus 225 a~~~~~l~~~~~-~~~~G~~~~~~gg 249 (264)
T PRK07576 225 ANAALFLASDMA-SYITGVVLPVDGG 249 (264)
T ss_pred HHHHHHHcChhh-cCccCCEEEECCC
Confidence 999998875322 1223555555554
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.4e-12 Score=126.62 Aligned_cols=219 Identities=14% Similarity=0.149 Sum_probs=139.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||.||++++++|++.|..| +++.|+.. +...+++ . +. ..++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~v---v~~~~~~~-----~~~~~~~---------~-~~--------~~~~~~ 59 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADI---VGVGVAEA-----PETQAQV---------E-AL--------GRKFHF 59 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEE---EEecCchH-----HHHHHHH---------H-Hc--------CCeEEE
Confidence 578999999999999999999999999754 55556421 1111111 0 00 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. +.
T Consensus 60 ~~~Dl~~-------~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~ 132 (251)
T PRK12481 60 ITADLIQ-------QKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQ 132 (251)
T ss_pred EEeCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHc
Confidence 9999995 33233443 358999999997542 144677789999999999887754 21
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... ....|
T Consensus 133 ~~~g~ii~isS~~~~~~~~--------------------------------------------------------~~~~Y 156 (251)
T PRK12481 133 GNGGKIINIASMLSFQGGI--------------------------------------------------------RVPSY 156 (251)
T ss_pred CCCCEEEEeCChhhcCCCC--------------------------------------------------------CCcch
Confidence 1 35899999986653211 12469
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++.+..++|+.|-.+...... .. ......... ..+ ...+...+
T Consensus 157 ~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~---~~----~~~~~~~~~----~~p-----~~~~~~pe 220 (251)
T PRK12481 157 TASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALR---AD----TARNEAILE----RIP-----ASRWGTPD 220 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcc---cC----hHHHHHHHh----cCC-----CCCCcCHH
Confidence 99999999888754 45899999999998654321110 00 010111111 111 11245679
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+++..++..... .-.+.+..+.++
T Consensus 221 eva~~~~~L~s~~~~-~~~G~~i~vdgg 247 (251)
T PRK12481 221 DLAGPAIFLSSSASD-YVTGYTLAVDGG 247 (251)
T ss_pred HHHHHHHHHhCcccc-CcCCceEEECCC
Confidence 999999888753222 223555655443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=128.08 Aligned_cols=219 Identities=11% Similarity=0.116 Sum_probs=138.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|++.|..| +++.|... ....+.+. + . ..++..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~v---v~~~~~~~-~~~~~~~~-------------~-~--------~~~~~~ 61 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDI---VGINIVEP-TETIEQVT-------------A-L--------GRRFLS 61 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEE---EEecCcch-HHHHHHHH-------------h-c--------CCeEEE
Confidence 689999999999999999999999999754 44444321 11111111 1 0 245788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++.. +.
T Consensus 62 ~~~Dl~~-------~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (253)
T PRK08993 62 LTADLRK-------IDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQ 134 (253)
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 9999995 222334333 589999999975422 35778899999999999998754 21
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... ....|
T Consensus 135 ~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y 158 (253)
T PRK08993 135 GNGGKIINIASMLSFQGGI--------------------------------------------------------RVPSY 158 (253)
T ss_pred CCCeEEEEECchhhccCCC--------------------------------------------------------CCcch
Confidence 1 25799999987653221 12479
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++.+..++|+.|-.+...... +. ......+.. . .+. .-+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~---~~----~~~~~~~~~-~---~p~-----~r~~~p~ 222 (253)
T PRK08993 159 TASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR---AD----EQRSAEILD-R---IPA-----GRWGLPS 222 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc---cc----hHHHHHHHh-c---CCC-----CCCcCHH
Confidence 99999998888654 35799999999999765332110 00 000001111 1 111 1255679
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|++++.++..... .-.+.++.+.++
T Consensus 223 eva~~~~~l~s~~~~-~~~G~~~~~dgg 249 (253)
T PRK08993 223 DLMGPVVFLASSASD-YINGYTIAVDGG 249 (253)
T ss_pred HHHHHHHHHhCcccc-CccCcEEEECCC
Confidence 999999888753322 223555555443
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-11 Score=122.56 Aligned_cols=174 Identities=14% Similarity=0.145 Sum_probs=114.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+||||+|++|++++++|++.|. +|+++.|+.... +.+. +.+++.. ..++..
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~---~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~~~ 60 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGA---TVILVARHQKKL---EKVY---------DAIVEAG--------HPEPFA 60 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCC---EEEEEeCChHHH---HHHH---------HHHHHcC--------CCCcce
Confidence 5789999999999999999999999886 457788865321 1111 1222110 134567
Q ss_pred EEccCCCCCCCCChhhhHHHH---h-CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEEL---W-NELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~-~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
+.+|+++.+.. +-....+.+ . .++|+|||+||... +. +.+...+++|+.|+..+++.+.+. .+-
T Consensus 61 ~~~D~~~~~~~-~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~ 139 (239)
T PRK08703 61 IRFDLMSAEEK-EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD 139 (239)
T ss_pred EEeeecccchH-HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC
Confidence 88888742100 001111112 2 46899999999642 11 235567899999999998887552 134
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 140 ~~iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~~s 163 (239)
T PRK08703 140 ASVIFVGESHGETPK--------------------------------------------------------AYWGGFGAS 163 (239)
T ss_pred CEEEEEeccccccCC--------------------------------------------------------CCccchHHh
Confidence 688998885432110 123469999
Q ss_pred HHHHHHHHHHh-----c-CCCcEEEEeccccccCC
Q 008315 235 KTMGEMIMQQS-----K-ENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 235 K~~aE~~v~~~-----~-~~lp~~IvRPsiV~g~~ 263 (570)
|+..|.+++.. . .++.+++++|+.|.++.
T Consensus 164 Kaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 164 KAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 99999987654 1 26999999999998864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-11 Score=123.35 Aligned_cols=206 Identities=16% Similarity=0.212 Sum_probs=128.2
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|+||||+|+||+++++.|+++|+ +|+++.|+... ..+.+.++ ++...+ ...+..+.+|
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~---~v~~~~r~~~~--~~~~~~~~---------~~~~~~-------~~~~~~~~~D 59 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA---KVFLTDINDAA--GLDAFAAE---------INAAHG-------EGVAFAAVQD 59 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcch--HHHHHHHH---------HHhcCC-------CceEEEEEee
Confidence 389999999999999999999986 45778876321 12222211 111110 1234567899
Q ss_pred CCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHH----HHHHHHHHHHHccCce
Q 008315 94 ISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTL----GAIHLVNFAKKCVKLK 155 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~----gt~~ll~~a~~~~~lk 155 (570)
++++ ++ .+.++ ..+|+|||+|+..... +.++..+++|+. +++.+++++++. +.+
T Consensus 60 ~~~~------~~-~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~ 131 (251)
T PRK07069 60 VTDE------AQ-WQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPA 131 (251)
T ss_pred cCCH------HH-HHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCc
Confidence 9953 22 22333 3689999999976432 234566788988 677777777665 567
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||...+.... ....|+.||
T Consensus 132 ~ii~~ss~~~~~~~~--------------------------------------------------------~~~~Y~~sK 155 (251)
T PRK07069 132 SIVNISSVAAFKAEP--------------------------------------------------------DYTAYNASK 155 (251)
T ss_pred EEEEecChhhccCCC--------------------------------------------------------CCchhHHHH
Confidence 999999987654321 134699999
Q ss_pred HHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 236 TMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 236 ~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+..+.+++.. ..++.++.++|+.+.++...+..... .. ......+..+. ....+..++|+
T Consensus 156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~-~~~~~~~~~~~---------~~~~~~~~~~v 222 (251)
T PRK07069 156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL---GE-EEATRKLARGV---------PLGRLGEPDDV 222 (251)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc---cc-hhHHHHHhccC---------CCCCCcCHHHH
Confidence 9988887653 22488899999998876543211000 00 11111122211 11234578999
Q ss_pred HHHHHHHHH
Q 008315 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 223 a~~~~~l~~ 231 (251)
T PRK07069 223 AHAVLYLAS 231 (251)
T ss_pred HHHHHHHcC
Confidence 999988764
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-11 Score=140.15 Aligned_cols=230 Identities=12% Similarity=0.135 Sum_probs=141.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+. +.+....+ ..++..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga---~Vvi~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 469 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGA---HVVLADLNLEA---AEAVA---------AEINGQFG-------AGRAVA 469 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCCHHH---HHHHH---------HHHHhhcC-------CCcEEE
Confidence 5789999999999999999999999986 45677775422 11111 11221111 135778
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|...+.+.+.. +.
T Consensus 470 v~~Dvtd-------~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~ 542 (676)
T TIGR02632 470 LKMDVTD-------EQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQ 542 (676)
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 689999999975321 23566788999998877655432 21
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||....... .....|
T Consensus 543 ~~~g~IV~iSS~~a~~~~--------------------------------------------------------~~~~aY 566 (676)
T TIGR02632 543 GLGGNIVFIASKNAVYAG--------------------------------------------------------KNASAY 566 (676)
T ss_pred CCCCEEEEEeChhhcCCC--------------------------------------------------------CCCHHH
Confidence 2 2479999986543211 123679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccccc---c--hHHHHHHHhcCCCceeecCCCceee
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK---T--INALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~---~--~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
+.||+..|.+++.+ ..++.+..++|+.|.....-.-.+|..... + ...+.. .+........
T Consensus 567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r~~l~r 637 (676)
T TIGR02632 567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEE---------HYAKRTLLKR 637 (676)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHH---------HHHhcCCcCC
Confidence 99999999998765 347999999999886321100012221100 0 000000 0111122234
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+..+|||+++..++.... ....+.++++.++
T Consensus 638 ~v~peDVA~av~~L~s~~~-~~~TG~~i~vDGG 669 (676)
T TIGR02632 638 HIFPADIAEAVFFLASSKS-EKTTGCIITVDGG 669 (676)
T ss_pred CcCHHHHHHHHHHHhCCcc-cCCcCcEEEECCC
Confidence 5788999999998765322 2234788888776
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-11 Score=140.79 Aligned_cols=194 Identities=17% Similarity=0.259 Sum_probs=134.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||++++++|+++|. +|+++.|+... .+.+.+++ +.. ..++.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 424 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGA---TVFLVARNGEA---LDELVAEI---------RAK---------GGTAHA 424 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 5689999999999999999999999985 46788886422 11111111 110 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc---c------cCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF---D------ERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f---~------~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
+.+|+++ .+..+.+++ .+|++||+||.... . +.++..+++|+.|+.++++.+.. +
T Consensus 425 ~~~Dv~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 497 (657)
T PRK07201 425 YTCDLTD-------SAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR 497 (657)
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999995 332334433 68999999996421 1 23567789999999988777643 1
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||..++.... ....
T Consensus 498 ~~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~ 521 (657)
T PRK07201 498 ERRFGHVVNVSSIGVQTNAP--------------------------------------------------------RFSA 521 (657)
T ss_pred hcCCCEEEEECChhhcCCCC--------------------------------------------------------Ccch
Confidence 2457899999987764321 1356
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.. ..++.+++++|+.|..+...+... . ......+.
T Consensus 522 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~----------------------~-----~~~~~~~~ 574 (657)
T PRK07201 522 YVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR----------------------Y-----NNVPTISP 574 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc----------------------c-----cCCCCCCH
Confidence 999999999988764 458999999999997654322100 0 01135788
Q ss_pred HHHHHHHHHHHH
Q 008315 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
+++|+.++.++.
T Consensus 575 ~~~a~~i~~~~~ 586 (657)
T PRK07201 575 EEAADMVVRAIV 586 (657)
T ss_pred HHHHHHHHHHHH
Confidence 999999998775
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.6e-12 Score=124.79 Aligned_cols=224 Identities=12% Similarity=0.086 Sum_probs=135.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|+||||+|+||++++++|++.|..| ++..|+... ..+.+.++ ++.+. ..++.
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v---~~~~~~~~~--~~~~~~~~---------~~~~~--------~~~~~ 62 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNI---AFTYNSNVE--EANKIAED---------LEQKY--------GIKAK 62 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEE---EEEcCCCHH--HHHHHHHH---------HHHhc--------CCceE
Confidence 4689999999999999999999999999653 455453321 11111111 11111 24688
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC---------cc----cCHHHHHHHHHHHHHHHHHHH
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK---------FD----ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~---------f~----~~~~~~~~~Nv~gt~~ll~~a 148 (570)
++.+|++++ +..+.++ ..+|++||+||... +. +.+...+++|+.+...+.+.+
T Consensus 63 ~~~~D~~~~-------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 135 (260)
T PRK08416 63 AYPLNILEP-------ETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEA 135 (260)
T ss_pred EEEcCCCCH-------HHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 999999953 2222332 35899999997531 11 234556888988877766655
Q ss_pred HH-cc--CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 149 KK-CV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 149 ~~-~~--~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.. +. +-.++|++||.......
T Consensus 136 ~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------------------- 159 (260)
T PRK08416 136 AKRMEKVGGGSIISLSSTGNLVYI-------------------------------------------------------- 159 (260)
T ss_pred HHhhhccCCEEEEEEeccccccCC--------------------------------------------------------
Confidence 43 21 34689999986432111
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+++.. ..++.+..|.|+.|-.+....+++. .......... .+ ..
T Consensus 160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-------~~~~~~~~~~----~~-----~~ 223 (260)
T PRK08416 160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-------EEVKAKTEEL----SP-----LN 223 (260)
T ss_pred CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-------HHHHHHHHhc----CC-----CC
Confidence 12357999999999988765 3479999999998855432211111 1111111111 00 11
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
-+...+++|++++.++..... --.+.++.+.++
T Consensus 224 r~~~p~~va~~~~~l~~~~~~-~~~G~~i~vdgg 256 (260)
T PRK08416 224 RMGQPEDLAGACLFLCSEKAS-WLTGQTIVVDGG 256 (260)
T ss_pred CCCCHHHHHHHHHHHcChhhh-cccCcEEEEcCC
Confidence 246789999999887753322 123566766554
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.8e-12 Score=127.98 Aligned_cols=155 Identities=23% Similarity=0.264 Sum_probs=113.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||+++++.|++.|.. |.++.|+..... ..++..
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~---v~~~~~~~~~~~------------------------------~~~~~~ 53 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGAN---VVNADIHGGDGQ------------------------------HENYQF 53 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCccccc------------------------------cCceEE
Confidence 57899999999999999999999999964 456666543210 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----------------ccCHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----------------DERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----------------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
+.+|+++ ++..+.++ ..+|+|||+||.... .+.++..+++|+.|+..+++
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 126 (266)
T PRK06171 54 VPTDVSS-------AEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ 126 (266)
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence 9999995 33233333 358999999996421 13356678999999999999
Q ss_pred HHHHc---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccc
Q 008315 147 FAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 147 ~a~~~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
++... .+-.++|++||.......
T Consensus 127 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 152 (266)
T PRK06171 127 AVARQMVKQHDGVIVNMSSEAGLEGS------------------------------------------------------ 152 (266)
T ss_pred HHHHHHHhcCCcEEEEEccccccCCC------------------------------------------------------
Confidence 88653 123579999987654221
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccc
Q 008315 224 IHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVS 260 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~ 260 (570)
.....|+.||+..+.+++.. ..++.+.+++|+.+.
T Consensus 153 --~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 --EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 12357999999999988765 358999999999884
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-11 Score=127.21 Aligned_cols=206 Identities=15% Similarity=0.175 Sum_probs=134.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++|+||||||.||.++++.|.+.|. +|+++.|+... .+.+. ++.+. ..++..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---l~~~~-------------~~l~~------~~~~~~ 61 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA---KLALVDLEEAE---LAALA-------------AELGG------DDRVLT 61 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHhcC------CCcEEE
Confidence 5799999999999999999999999985 46777775321 11111 11110 135667
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (570)
+.+|+++ .+..+.++ ..+|+|||+||...+. +.++..+++|+.|+.++++.+... ++
T Consensus 62 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~ 134 (296)
T PRK05872 62 VVADVTD-------LAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER 134 (296)
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 7899995 32222332 4689999999975431 346777999999999999988642 12
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 135 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 158 (296)
T PRK05872 135 RGYVLQVSSLAAFAAA--------------------------------------------------------PGMAAYCA 158 (296)
T ss_pred CCEEEEEeCHhhcCCC--------------------------------------------------------CCchHHHH
Confidence 3589999997665322 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.. ..++.+.++.|+.|..+....... . ......+. +.++ ....-.++.+++
T Consensus 159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~---~----~~~~~~~~-~~~~------~p~~~~~~~~~v 224 (296)
T PRK05872 159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA---D----LPAFRELR-ARLP------WPLRRTTSVEKC 224 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc---c----chhHHHHH-hhCC------CcccCCCCHHHH
Confidence 999999988754 457999999999886653221110 0 01111111 1110 011245788999
Q ss_pred HHHHHHHHH
Q 008315 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 225 a~~i~~~~~ 233 (296)
T PRK05872 225 AAAFVDGIE 233 (296)
T ss_pred HHHHHHHHh
Confidence 999988875
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.41 E-value=9e-12 Score=116.03 Aligned_cols=164 Identities=16% Similarity=0.175 Sum_probs=114.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||||++|.+++++|++.|.. .|+++.|+.......... ++.+++. ..++..+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~~~~~~---------~~~~~~~---------~~~~~~~~~ 60 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGAR--HLVLLSRSGPDAPGAAEL---------LAELEAL---------GAEVTVVAC 60 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCC--eEEEEeCCCCCCccHHHH---------HHHHHhc---------CCeEEEEEC
Confidence 57999999999999999999998752 456777765433211110 1111111 246788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
|++++ +..+.++ ..+|.|||+|+..... +.++..+++|+.|+.++++++++. +.+++|
T Consensus 61 D~~~~-------~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii 132 (180)
T smart00822 61 DVADR-------AALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFV 132 (180)
T ss_pred CCCCH-------HHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEE
Confidence 99852 2222332 3479999999965321 345677899999999999999765 678899
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||....-.. .....|+.+|...
T Consensus 133 ~~ss~~~~~~~--------------------------------------------------------~~~~~y~~sk~~~ 156 (180)
T smart00822 133 LFSSVAGVLGN--------------------------------------------------------PGQANYAAANAFL 156 (180)
T ss_pred EEccHHHhcCC--------------------------------------------------------CCchhhHHHHHHH
Confidence 99987543211 1135699999999
Q ss_pred HHHHHHh-cCCCcEEEEeccccc
Q 008315 239 EMIMQQS-KENLSLVIIRPTIVS 260 (570)
Q Consensus 239 E~~v~~~-~~~lp~~IvRPsiV~ 260 (570)
+.++... ..+++++.+.|+.+-
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 157 DALAAHRRARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHhcCCceEEEeecccc
Confidence 9998654 678999999988653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-11 Score=122.10 Aligned_cols=166 Identities=19% Similarity=0.227 Sum_probs=110.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||||+||.++++.|++.|.. |.++.|+... .+.+.++ ++.. + ...+.++.+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~---vv~~~r~~~~---~~~~~~~---------~~~~-~-------~~~~~~~~~ 57 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE---LFLTDRDADG---LAQTVAD---------ARAL-G-------GTVPEHRAL 57 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH---------HHhc-C-------CCcceEEEe
Confidence 57999999999999999999999864 5666775321 1111111 1111 0 123456789
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c---cCc
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l 154 (570)
|++++ +..+.++ ..+|+|||+||..... +.++..+++|+.|+..+++.+.. + +..
T Consensus 58 D~~~~-------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~ 130 (272)
T PRK07832 58 DISDY-------DAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRG 130 (272)
T ss_pred eCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence 99953 2222222 3589999999864321 33567799999999999998753 1 123
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 131 g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 154 (272)
T PRK07832 131 GHLVNVSSAAGLVAL--------------------------------------------------------PWHAAYSAS 154 (272)
T ss_pred cEEEEEccccccCCC--------------------------------------------------------CCCcchHHH
Confidence 589999987532111 123569999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCC
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
|+..+.+.... ..++++++++|+.+.++..
T Consensus 155 K~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~ 189 (272)
T PRK07832 155 KFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV 189 (272)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence 98666665432 4579999999999987643
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.3e-12 Score=127.40 Aligned_cols=164 Identities=18% Similarity=0.239 Sum_probs=113.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||++++++|++.|++ |+++.|+... ++ ++ .+.. ..++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~------~~-~l---------~~~~--------~~~~~~ 55 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGAR---VAVLDKSAAG------LQ-EL---------EAAH--------GDAVVG 55 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCHHH------HH-HH---------Hhhc--------CCceEE
Confidence 46899999999999999999999999964 4666775421 11 11 1111 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c--------cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D--------ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~--------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
+.+|++++ ++ .+.++ .++|++||+||.... . +.++..+++|+.|+..+++++..
T Consensus 56 ~~~D~~~~------~~-~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 128 (262)
T TIGR03325 56 VEGDVRSL------DD-HKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALP 128 (262)
T ss_pred EEeccCCH------HH-HHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHH
Confidence 99999952 22 22322 468999999986421 1 13567789999999999999865
Q ss_pred c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 151 ~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. ++-.++|++||....... ...
T Consensus 129 ~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~ 152 (262)
T TIGR03325 129 ALVASRGSVIFTISNAGFYPN--------------------------------------------------------GGG 152 (262)
T ss_pred HHhhcCCCEEEEeccceecCC--------------------------------------------------------CCC
Confidence 3 112468888876543111 113
Q ss_pred chHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCC
Q 008315 229 NTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~ 263 (570)
..|+.||+..+.+++.. .+.+.+..+.|+.|..+.
T Consensus 153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence 47999999999988765 334889999999987654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.1e-12 Score=124.97 Aligned_cols=218 Identities=17% Similarity=0.157 Sum_probs=130.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||+.+++.|++.|+.| +++.+.... ..+.+. +.++. . ..++..+.+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v---~~~~~~~~~--~~~~~~---------~~~~~-~--------~~~~~~~~~ 59 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSV---GINYARDAA--AAEETA---------DAVRA-A--------GGRACVVAG 59 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEE---EEEeCCCHH--HHHHHH---------HHHHh-c--------CCcEEEEEe
Confidence 689999999999999999999998653 444433211 111111 11111 1 246889999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHH-HHccC---
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFA-KKCVK--- 153 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a-~~~~~--- 153 (570)
|++++ ++ .+.++ ..+|+|||+||.... . +.++..+++|+.|+..+++.+ ..+..
T Consensus 60 Dl~~~------~~-~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 132 (248)
T PRK06947 60 DVANE------AD-VIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG 132 (248)
T ss_pred ccCCH------HH-HHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence 99963 22 22222 369999999996432 1 234566899999999987544 34421
Q ss_pred --ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 154 --LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 154 --lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
-.+||++||....-... .....|
T Consensus 133 ~~~~~ii~~sS~~~~~~~~-------------------------------------------------------~~~~~Y 157 (248)
T PRK06947 133 GRGGAIVNVSSIASRLGSP-------------------------------------------------------NEYVDY 157 (248)
T ss_pred CCCcEEEEECchhhcCCCC-------------------------------------------------------CCCccc
Confidence 13599999865432110 012469
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..+++++++||+.|..+.... . + .+ ....... +.. + ..-..+++
T Consensus 158 ~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~----~-~--~~-~~~~~~~-~~~---~-----~~~~~~~e 220 (248)
T PRK06947 158 AGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS----G-G--QP-GRAARLG-AQT---P-----LGRAGEAD 220 (248)
T ss_pred HhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccc----c-C--CH-HHHHHHh-hcC---C-----CCCCcCHH
Confidence 99999999887654 347999999999997753210 0 0 00 0011111 010 0 01135789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEecc
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s 333 (570)
+++++++.++.... ....+.++.+.+
T Consensus 221 ~va~~~~~l~~~~~-~~~~G~~~~~~g 246 (248)
T PRK06947 221 EVAETIVWLLSDAA-SYVTGALLDVGG 246 (248)
T ss_pred HHHHHHHHHcCccc-cCcCCceEeeCC
Confidence 99999988775332 122356665544
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-11 Score=122.99 Aligned_cols=220 Identities=10% Similarity=0.081 Sum_probs=136.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+++||||+|+||+++++.|++.|. +|+++.|+... .+.+.++ +++. ..++.++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~---~Vi~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 56 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA---NVVITGRTKEK---LEEAKLE---------IEQF---------PGQVLTVQ 56 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 58999999999999999999999986 46777776421 1122111 1110 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHHc---cC-
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKKC---VK- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (570)
+|+++ ++..+.++ ..+|+|||+||.... . +.++..+++|+.|+.++++++.+. .+
T Consensus 57 ~D~~~-------~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 129 (252)
T PRK07677 57 MDVRN-------PEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI 129 (252)
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC
Confidence 99995 32233333 368999999985321 1 335778999999999999988542 12
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||.+..... .....|+.
T Consensus 130 ~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (252)
T PRK07677 130 KGNIINMVATYAWDAG--------------------------------------------------------PGVIHSAA 153 (252)
T ss_pred CEEEEEEcChhhccCC--------------------------------------------------------CCCcchHH
Confidence 3679999987643211 12346999
Q ss_pred HHHHHHHHHHH----hc--CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 234 TKTMGEMIMQQ----SK--ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 234 sK~~aE~~v~~----~~--~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+..+.+++. +. .++++..++|+.|.++.... ..|.+ ......+.... + ..-+...++
T Consensus 154 sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~-~~~~~-----~~~~~~~~~~~----~-----~~~~~~~~~ 218 (252)
T PRK07677 154 AKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGAD-KLWES-----EEAAKRTIQSV----P-----LGRLGTPEE 218 (252)
T ss_pred HHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccc-cccCC-----HHHHHHHhccC----C-----CCCCCCHHH
Confidence 99998888775 22 48999999999997532110 01111 11111111110 0 112566788
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++++..++.... ..-.+.++.+.++
T Consensus 219 va~~~~~l~~~~~-~~~~g~~~~~~gg 244 (252)
T PRK07677 219 IAGLAYFLLSDEA-AYINGTCITMDGG 244 (252)
T ss_pred HHHHHHHHcCccc-cccCCCEEEECCC
Confidence 9998877664321 1223566666554
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.8e-12 Score=125.56 Aligned_cols=164 Identities=17% Similarity=0.255 Sum_probs=115.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||.+++++|++.|++ |+++.|++.. .+.+. ++. ..++.+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGAR---VAVLERSAEK---LASLR-------------QRF--------GDHVLV 56 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-------------HHh--------CCcceE
Confidence 57899999999999999999999999964 5677776422 11111 111 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc--------c----CHHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD--------E----RYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~--------~----~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
+.+|++++ ++ .+.++ ..+|++||+||..... + .++..+++|+.|+..+++.+..
T Consensus 57 ~~~D~~~~------~~-~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (263)
T PRK06200 57 VEGDVTSY------AD-NQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALP 129 (263)
T ss_pred EEccCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHH
Confidence 99999953 22 22332 3589999999964321 1 1455678999999999888864
Q ss_pred c-c-CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 151 C-V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 151 ~-~-~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. . .-.++|++||...+... ...
T Consensus 130 ~~~~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~ 153 (263)
T PRK06200 130 ALKASGGSMIFTLSNSSFYPG--------------------------------------------------------GGG 153 (263)
T ss_pred HHHhcCCEEEEECChhhcCCC--------------------------------------------------------CCC
Confidence 2 1 22479999987654321 113
Q ss_pred chHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCC
Q 008315 229 NTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~ 263 (570)
..|+.||+..+.+++.. .+++.+..+.|+.|..+.
T Consensus 154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~ 192 (263)
T PRK06200 154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL 192 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence 46999999999888764 446899999999986654
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.7e-11 Score=123.33 Aligned_cols=181 Identities=14% Similarity=0.146 Sum_probs=119.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||||+||.+++++|++.|. +|++..|+.... +...++ +.+..+ ..++.+
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~---~Vil~~R~~~~~---~~~~~~---------l~~~~~-------~~~v~~ 69 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGA---EVILPVRNRAKG---EAAVAA---------IRTAVP-------DAKLSL 69 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHHhCC-------CCceEE
Confidence 5899999999999999999999999985 567788864321 111111 222221 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc------cCHHHHHHHHHHHHHHHHHHHHHc--cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD------ERYDVAFGINTLGAIHLVNFAKKC--VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~------~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (570)
+.+|++++ +..+.++ ..+|++||+||..... +.++..+.+|+.|+..+.+++... .+-
T Consensus 70 ~~~Dl~d~-------~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~ 142 (313)
T PRK05854 70 RALDLSSL-------ASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR 142 (313)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC
Confidence 99999953 2223333 3489999999975321 457778999999988888777531 123
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... +.-..+.+..+ ......|+.|
T Consensus 143 ~riv~vsS~~~~~~~---~~~~~~~~~~~-----------------------------------------~~~~~~Y~~S 178 (313)
T PRK05854 143 ARVTSQSSIAARRGA---INWDDLNWERS-----------------------------------------YAGMRAYSQS 178 (313)
T ss_pred CCeEEEechhhcCCC---cCccccccccc-----------------------------------------CcchhhhHHH
Confidence 589999987543221 11000100000 0123579999
Q ss_pred HHHHHHHHHHh-------cCCCcEEEEeccccccCC
Q 008315 235 KTMGEMIMQQS-------KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 235 K~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~ 263 (570)
|+..+.+..+. ..++.+..+.||.|-...
T Consensus 179 K~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 179 KIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred HHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 99999988765 236899999999987654
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.5e-12 Score=120.14 Aligned_cols=252 Identities=18% Similarity=0.186 Sum_probs=166.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+..+||||||-|.+|..++..|.. -++-..|++-.--|...+ ..+.=-++
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~-~yGs~~VILSDI~KPp~~-----------------------------V~~~GPyI 92 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRY-MYGSECVILSDIVKPPAN-----------------------------VTDVGPYI 92 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHH-HhCCccEehhhccCCchh-----------------------------hcccCCch
Confidence 346999999999999998765543 333222222111111110 01222456
Q ss_pred EccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCC-c-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 91 AGDISSEDLGLKDSNLKEELW--NELDVMVNSAAITK-F-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~-f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
..|+.+ ...++++. ..+|-.||..|..+ + ..+...+.++|+.|..|+++.|++. +++-|| -||..++
T Consensus 93 y~DILD-------~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-kL~iFV-PSTIGAF 163 (366)
T KOG2774|consen 93 YLDILD-------QKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-KLKVFV-PSTIGAF 163 (366)
T ss_pred hhhhhc-------cccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-CeeEee-ccccccc
Confidence 777773 33233443 35999999988653 2 2345567899999999999999998 776554 6899999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
|..+ +-++.+.+ -+..+.+.|+.||.-||.+-+.+
T Consensus 164 GPtS------PRNPTPdl--------------------------------------tIQRPRTIYGVSKVHAEL~GEy~~ 199 (366)
T KOG2774|consen 164 GPTS------PRNPTPDL--------------------------------------TIQRPRTIYGVSKVHAELLGEYFN 199 (366)
T ss_pred CCCC------CCCCCCCe--------------------------------------eeecCceeechhHHHHHHHHHHHH
Confidence 8753 11111111 01246678999999999887765
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
+-++....+|.+.+.+... |-.|-.| +...-+-.+..+|+. ..+-.++.+..+.+..||-.+++..+....++-
T Consensus 200 hrFg~dfr~~rfPg~is~~~-pgggttd--ya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~l- 274 (366)
T KOG2774|consen 200 HRFGVDFRSMRFPGIISATK-PGGGTTD--YAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAADSQSL- 274 (366)
T ss_pred hhcCccceecccCcccccCC-CCCCcch--hHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhCCHHHh-
Confidence 5688999999888777543 3344333 333333344455554 677789999999999999999998776443322
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
...+||+++ -.+|-+|+++.+.+...
T Consensus 275 krr~ynvt~---~sftpee~~~~~~~~~p 300 (366)
T KOG2774|consen 275 KRRTYNVTG---FSFTPEEIADAIRRVMP 300 (366)
T ss_pred hhheeeece---eccCHHHHHHHHHhhCC
Confidence 257999987 57999999999887653
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.1e-12 Score=125.99 Aligned_cols=158 Identities=15% Similarity=0.164 Sum_probs=111.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||||+||++++++|++.|.. |.++.|+..... . .. ...++.++.+
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~---v~~~~r~~~~~~-----~-------------~~--------~~~~~~~~~~ 52 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIA---VLGVARSRHPSL-----A-------------AA--------AGERLAEVEL 52 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCE---EEEEecCcchhh-----h-------------hc--------cCCeEEEEEe
Confidence 58999999999999999999998854 567788653210 0 00 0246888999
Q ss_pred cCCCCCCCCChhhhHHHHh-----------CCccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 93 DISSEDLGLKDSNLKEELW-----------NELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-----------~~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
|++++ ++ .+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.+.
T Consensus 53 D~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 125 (243)
T PRK07023 53 DLSDA------AA-AAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS 125 (243)
T ss_pred ccCCH------HH-HHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh
Confidence 99963 22 22311 1578999999975421 335677899999988777766542
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||...+... .....
T Consensus 126 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 149 (243)
T PRK07023 126 DAAERRILHISSGAARNAY--------------------------------------------------------AGWSV 149 (243)
T ss_pred ccCCCEEEEEeChhhcCCC--------------------------------------------------------CCchH
Confidence 134689999997654221 12357
Q ss_pred HHHHHHHHHHHHHHh----cCCCcEEEEeccccccC
Q 008315 231 YVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~ 262 (570)
|+.+|+..|.+++.+ ..++.+.+++|+.+-.+
T Consensus 150 Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 150 YCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 999999999999865 24799999999988554
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-11 Score=121.81 Aligned_cols=222 Identities=14% Similarity=0.132 Sum_probs=132.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||.+++++|++.|.. ++++.|+... ..+.+.++ ++.. ..++..
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~---vvi~~~~~~~--~~~~~~~~---------l~~~---------~~~~~~ 61 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAK---VVINYRSDEE--EANDVAEE---------IKKA---------GGEAIA 61 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHH---------HHHc---------CCeEEE
Confidence 58999999999999999999999999854 4555664321 11111111 1110 245778
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHH----HHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (570)
+.+|++++ ++ .+.++ ..+|++||+|+.... . +.++..+++|+.|+..+++.+ ++.
T Consensus 62 ~~~Dl~~~------~~-i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 134 (261)
T PRK08936 62 VKGDVTVE------SD-VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEH 134 (261)
T ss_pred EEecCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 22 22333 358999999997432 1 335667899998887665544 332
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
..-.++|++||....... .....|
T Consensus 135 ~~~g~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T PRK08936 135 DIKGNIINMSSVHEQIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_pred CCCcEEEEEccccccCCC--------------------------------------------------------CCCccc
Confidence 123589999996432111 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.++.++|+.|..+..... +.... ....... .. + ...+...+
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~------~~~~~-~~~~~~~-~~---~-----~~~~~~~~ 222 (261)
T PRK08936 159 AASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK------FADPK-QRADVES-MI---P-----MGYIGKPE 222 (261)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc------cCCHH-HHHHHHh-cC---C-----CCCCcCHH
Confidence 99997766665543 4589999999999877643210 00111 1111111 11 1 12355678
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++++..++..... .-.+.++.+.++
T Consensus 223 ~va~~~~~l~s~~~~-~~~G~~i~~d~g 249 (261)
T PRK08936 223 EIAAVAAWLASSEAS-YVTGITLFADGG 249 (261)
T ss_pred HHHHHHHHHcCcccC-CccCcEEEECCC
Confidence 999998887753322 122455555443
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.2e-11 Score=119.15 Aligned_cols=213 Identities=11% Similarity=0.082 Sum_probs=131.0
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+||||||+||.++++.|++.|.+ ++++.|+.... .+.+. +.+++. ..++.++.+|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~---v~~~~~~~~~~--~~~~~---------~~l~~~---------~~~~~~~~~Dl 57 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE---ICVHYHSGRSD--AESVV---------SAIQAQ---------GGNARLLQFDV 57 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE---EEEEeCCCHHH--HHHHH---------HHHHHc---------CCeEEEEEccC
Confidence 689999999999999999999864 46666653211 11111 111111 24688999999
Q ss_pred CCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHH-Hc---cCceE
Q 008315 95 SSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAK-KC---VKLKV 156 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~-~~---~~lk~ 156 (570)
+++ ++ .+.++ ..+|++||+||.... .+.++..+++|+.|+.++++.+. .+ .+..+
T Consensus 58 ~~~------~~-~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 130 (239)
T TIGR01831 58 ADR------VA-CRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGR 130 (239)
T ss_pred CCH------HH-HHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeE
Confidence 963 22 22332 357999999986432 23466779999999999988652 21 24468
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... .....|+.+|+
T Consensus 131 iv~vsS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 154 (239)
T TIGR01831 131 IITLASVSGVMGN--------------------------------------------------------RGQVNYSAAKA 154 (239)
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCcchHHHHH
Confidence 9999996543211 01246999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+.+.+.. ..+++++.++|+.|.++.....+.+ ...... .. + ...+...++++++
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~-~~---~-----~~~~~~~~~va~~ 215 (239)
T TIGR01831 155 GLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHD----------LDEALK-TV---P-----MNRMGQPAEVASL 215 (239)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHH----------HHHHHh-cC---C-----CCCCCCHHHHHHH
Confidence 877766543 3579999999999976543221111 111111 11 0 1123456899999
Q ss_pred HHHHHHHhcCCCCCCceEEecc
Q 008315 312 MIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s 333 (570)
++.++..... ...+.+..+.+
T Consensus 216 ~~~l~~~~~~-~~~g~~~~~~g 236 (239)
T TIGR01831 216 AGFLMSDGAS-YVTRQVISVNG 236 (239)
T ss_pred HHHHcCchhc-CccCCEEEecC
Confidence 9988763322 12244444443
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.6e-11 Score=122.00 Aligned_cols=229 Identities=10% Similarity=0.070 Sum_probs=139.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|.||++++++|++.|+. |+++.|+... .+.+.++ +++.. ..++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~ 62 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGAD---VILLSRNEEN---LKKAREK---------IKSES--------NVDVSY 62 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 58999999999999999999999999964 5677776422 1222211 11111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (570)
+.+|++++ +..+.+++ .+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .+
T Consensus 63 ~~~Dv~~~-------~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~ 135 (263)
T PRK08339 63 IVADLTKR-------EDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG 135 (263)
T ss_pred EEecCCCH-------HHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 99999963 22334433 58999999997432 144777899999988777766543 2 23
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 136 ~g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~y~a 159 (263)
T PRK08339 136 FGRIIYSTSVAIKEPI--------------------------------------------------------PNIALSNV 159 (263)
T ss_pred CCEEEEEcCccccCCC--------------------------------------------------------CcchhhHH
Confidence 4689999998654211 11346889
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCccccc-cchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVEDL-KTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+|+..+.+.+.. ..|+.+..|.|+.|-.+..... ....... .........+.. .. ...-+...+
T Consensus 160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----p~~r~~~p~ 230 (263)
T PRK08339 160 VRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAK----PI-----PLGRLGEPE 230 (263)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhc----cC-----CcccCcCHH
Confidence 999888877654 4579999999999865421100 0000000 000011111111 01 112346678
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|+++..++..... --.+.++.+.++
T Consensus 231 dva~~v~fL~s~~~~-~itG~~~~vdgG 257 (263)
T PRK08339 231 EIGYLVAFLASDLGS-YINGAMIPVDGG 257 (263)
T ss_pred HHHHHHHHHhcchhc-CccCceEEECCC
Confidence 999999887753322 223667777655
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1e-11 Score=123.67 Aligned_cols=161 Identities=16% Similarity=0.220 Sum_probs=108.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|+++|++ |+++.|.... ++. ++. +. ...+++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~---V~~~~r~~~~-----~~~-~~~---------~~--------~~~~~~~~~~ 55 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTH---VISISRTENK-----ELT-KLA---------EQ--------YNSNLTFHSL 55 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCE---EEEEeCCchH-----HHH-HHH---------hc--------cCCceEEEEe
Confidence 68999999999999999999999864 5677776421 111 111 00 1246788999
Q ss_pred cCCCCCCCCChhhhHHHHhCCc-----------cEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 93 DISSEDLGLKDSNLKEELWNEL-----------DVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~v-----------diVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
|++++ +..+.+++++ .++||+||.... . +.+...+++|+.|+..+++.+...
T Consensus 56 D~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 128 (251)
T PRK06924 56 DLQDV-------HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTK 128 (251)
T ss_pred cCCCH-------HHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHh
Confidence 99953 2233443321 278999987532 1 235667888999977776655432
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..+||++||..+... + ....
T Consensus 129 ~~~~~~~iv~~sS~~~~~~---------~-----------------------------------------------~~~~ 152 (251)
T PRK06924 129 DWKVDKRVINISSGAAKNP---------Y-----------------------------------------------FGWS 152 (251)
T ss_pred ccCCCceEEEecchhhcCC---------C-----------------------------------------------CCcH
Confidence 23458999999764321 1 1235
Q ss_pred hHHHHHHHHHHHHHHh-------cCCCcEEEEeccccccC
Q 008315 230 TYVFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~ 262 (570)
.|+.+|+..|.+++.. ..++.+..++|+.|-.+
T Consensus 153 ~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 153 AYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred HHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 7999999999988754 23688999999988653
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.4e-11 Score=121.88 Aligned_cols=220 Identities=15% Similarity=0.179 Sum_probs=135.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD------TESAALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
.+++|+++||||+|.||.+++++|++.|.. |+++.|+.. .....+.+.++ ++..
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~---vii~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-------- 62 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGAR---VVVNDIGVGLDGSASGGSAAQAVVDE---------IVAA-------- 62 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEeeCCccccccccchhHHHHHHHH---------HHhc--------
Confidence 368999999999999999999999999964 456655431 11111222111 1111
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHH
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a 148 (570)
..++.++.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++++
T Consensus 63 -~~~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (286)
T PRK07791 63 -GGEAVANGDDIADW-------DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHA 134 (286)
T ss_pred -CCceEEEeCCCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHH
Confidence 24578899999953 2222222 468999999997532 1346778999999999998877
Q ss_pred HHc-c-C-------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccc
Q 008315 149 KKC-V-K-------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 149 ~~~-~-~-------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
... . . -.++|++||.......
T Consensus 135 ~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------------------------- 164 (286)
T PRK07791 135 AAYWRAESKAGRAVDARIINTSSGAGLQGS-------------------------------------------------- 164 (286)
T ss_pred HHHHHHhcccCCCCCcEEEEeCchhhCcCC--------------------------------------------------
Confidence 531 1 1 1479999986543211
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeec
Q 008315 220 ERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~ 294 (570)
.....|+.||+..+.+++.. ..++.+..|.|+ +..... .. ....... ..
T Consensus 165 ------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~-------~~------~~~~~~~-~~----- 218 (286)
T PRK07791 165 ------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMT-------ET------VFAEMMA-KP----- 218 (286)
T ss_pred ------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcc-------hh------hHHHHHh-cC-----
Confidence 11357999999998887654 458999999998 422111 00 0000000 00
Q ss_pred CCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 295 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+.........+++|++++.++..... .-.++++.+.++
T Consensus 219 -~~~~~~~~~pedva~~~~~L~s~~~~-~itG~~i~vdgG 256 (286)
T PRK07791 219 -EEGEFDAMAPENVSPLVVWLGSAESR-DVTGKVFEVEGG 256 (286)
T ss_pred -cccccCCCCHHHHHHHHHHHhCchhc-CCCCcEEEEcCC
Confidence 01111345689999999887753322 223677777665
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-11 Score=134.52 Aligned_cols=220 Identities=16% Similarity=0.184 Sum_probs=143.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
...||+++||||+|.||.+++++|+++|. +|+++.|+.. ..+.+. ++. ..++.
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~---~V~~~~r~~~---~~~~~~-------------~~~--------~~~~~ 318 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGD---RLLIIDRDAE---GAKKLA-------------EAL--------GDEHL 318 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHH-------------HHh--------CCcee
Confidence 45789999999999999999999999996 4567777532 111111 111 14567
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHH-cc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKK-CV 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (570)
.+.+|++++ +..+.++ ..+|++||+||.... . +.++..+++|+.|+..+++.+.. +.
T Consensus 319 ~~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 391 (520)
T PRK06484 319 SVQADITDE-------AAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS 391 (520)
T ss_pred EEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 789999953 2223333 358999999997521 1 34667799999999999998865 33
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 392 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 415 (520)
T PRK06484 392 QGGVIVNLGSIASLLAL--------------------------------------------------------PPRNAYC 415 (520)
T ss_pred cCCEEEEECchhhcCCC--------------------------------------------------------CCCchhH
Confidence 34689999997654321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++++..|.|+.|.++..... .+. .. .....+.+.. + ...+..++|
T Consensus 416 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~--~~-~~~~~~~~~~----~-----~~~~~~~~d 480 (520)
T PRK06484 416 ASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLAL---KAS--GR-ADFDSIRRRI----P-----LGRLGDPEE 480 (520)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhh---ccc--cH-HHHHHHHhcC----C-----CCCCcCHHH
Confidence 9999999888764 3479999999999976532110 000 00 0011111111 1 112467899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ..-.++++.+.++
T Consensus 481 ia~~~~~l~s~~~-~~~~G~~i~vdgg 506 (520)
T PRK06484 481 VAEAIAFLASPAA-SYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHhCccc-cCccCcEEEECCC
Confidence 9999988875322 2234778888765
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.1e-11 Score=117.43 Aligned_cols=205 Identities=16% Similarity=0.255 Sum_probs=130.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|+++++.+ .+.+..|..... . ...++.++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~-~v~~~~~~~~~~-----~------------------------~~~~~~~~~~ 50 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDA-TVHATYRHHKPD-----F------------------------QHDNVQWHAL 50 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCC-EEEEEccCCccc-----c------------------------ccCceEEEEe
Confidence 589999999999999999999987665 354544533211 0 0256788999
Q ss_pred cCCCCCCCCChhhh--HHHHhCCccEEEEcCccCCcc-------------cCHHHHHHHHHHHHHHHHHHHHH-cc--Cc
Q 008315 93 DISSEDLGLKDSNL--KEELWNELDVMVNSAAITKFD-------------ERYDVAFGINTLGAIHLVNFAKK-CV--KL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~--~~~l~~~vdiVih~Aa~v~f~-------------~~~~~~~~~Nv~gt~~ll~~a~~-~~--~l 154 (570)
|++++ ++. ..+.+.++|+|||+||..... +.+...+.+|+.|+..+.+.+.. +. +.
T Consensus 51 Dls~~------~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~ 124 (235)
T PRK09009 51 DVTDE------AEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSES 124 (235)
T ss_pred cCCCH------HHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCC
Confidence 99963 221 112345799999999986321 12456789999999988887765 31 23
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+++.+||... .. .+... .....|+.+
T Consensus 125 ~~i~~iss~~~--~~----~~~~~-----------------------------------------------~~~~~Y~as 151 (235)
T PRK09009 125 AKFAVISAKVG--SI----SDNRL-----------------------------------------------GGWYSYRAS 151 (235)
T ss_pred ceEEEEeeccc--cc----ccCCC-----------------------------------------------CCcchhhhh
Confidence 57888886331 11 01100 112479999
Q ss_pred HHHHHHHHHHhc-------CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 235 KTMGEMIMQQSK-------ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 235 K~~aE~~v~~~~-------~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
|+..+.+++... .++.+..+.|+.|-.+...+. .. . .....++..++
T Consensus 152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-----------------~~----~-----~~~~~~~~~~~ 205 (235)
T PRK09009 152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-----------------QQ----N-----VPKGKLFTPEY 205 (235)
T ss_pred HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-----------------hh----c-----cccCCCCCHHH
Confidence 999999887641 467888899988866532110 00 0 01123578899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEecc
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s 333 (570)
+|++++.++...... ..+..+.+.+
T Consensus 206 ~a~~~~~l~~~~~~~-~~g~~~~~~g 230 (235)
T PRK09009 206 VAQCLLGIIANATPA-QSGSFLAYDG 230 (235)
T ss_pred HHHHHHHHHHcCChh-hCCcEEeeCC
Confidence 999999988753221 1245554443
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.6e-11 Score=124.46 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=115.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.|++++||||||+||++++++|++.|.+ |+++.|+... .+.+.++ +++..+ ..++..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~---Vil~~R~~~~---l~~~~~~---------l~~~~~-------~~~~~~~ 109 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN---LVLVARNPDK---LKDVSDS---------IQSKYS-------KTQIKTV 109 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC---EEEEECCHHH---HHHHHHH---------HHHHCC-------CcEEEEE
Confidence 4899999999999999999999999975 4677886422 2222211 222221 1357778
Q ss_pred EccCCCCCCCCChhhhHH---HHhC--CccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHHHH-c--cC
Q 008315 91 AGDISSEDLGLKDSNLKE---ELWN--ELDVMVNSAAITK-----FD----ERYDVAFGINTLGAIHLVNFAKK-C--VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~---~l~~--~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (570)
.+|+++. ..+..+ +.+. ++|++||+||... +. +.++..+++|+.|+..+.+++.. | .+
T Consensus 110 ~~Dl~~~-----~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~ 184 (320)
T PLN02780 110 VVDFSGD-----IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK 184 (320)
T ss_pred EEECCCC-----cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 8999841 112112 2233 3669999999752 21 23456789999999999998754 2 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||........ . .....|+.
T Consensus 185 ~g~IV~iSS~a~~~~~~-------~-----------------------------------------------p~~~~Y~a 210 (320)
T PLN02780 185 KGAIINIGSGAAIVIPS-------D-----------------------------------------------PLYAVYAA 210 (320)
T ss_pred CcEEEEEechhhccCCC-------C-----------------------------------------------ccchHHHH
Confidence 56899999976542100 0 12367999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
||+..+.+.+.. ..|+.+..+.|+.|-.+
T Consensus 211 SKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 211 TKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred HHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 999999887654 45899999999988654
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.8e-11 Score=115.37 Aligned_cols=183 Identities=17% Similarity=0.295 Sum_probs=123.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||+|.||++++++|.++ . +|+++.|+.. .+.+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~---~vi~~~r~~~--------------------------------------~~~~ 38 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H---EVITAGRSSG--------------------------------------DVQV 38 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C---cEEEEecCCC--------------------------------------ceEe
Confidence 47999999999999999999986 3 4567666421 2567
Q ss_pred cCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-ccCceEEEEEe
Q 008315 93 DISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk~fV~vS 161 (570)
|+++ .+..+.+++ ++|+|||+||...+. +.+...+++|+.|+.++++++.. +.+-.+|+++|
T Consensus 39 D~~~-------~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 111 (199)
T PRK07578 39 DITD-------PASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS 111 (199)
T ss_pred cCCC-------hHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence 8885 332334433 689999999975331 34667789999999999998865 33335789988
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|....... .....|+.||+..+.+
T Consensus 112 s~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 112 GILSDEPI--------------------------------------------------------PGGASAATVNGALEGF 135 (199)
T ss_pred ccccCCCC--------------------------------------------------------CCchHHHHHHHHHHHH
Confidence 76542111 1235799999998888
Q ss_pred HHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 242 MQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 242 v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++.. ..++.+..+.|+.|-.+... . + +.+++ ...++.+++|++++.++.
T Consensus 136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~~------------------~--~--~~~~~-----~~~~~~~~~a~~~~~~~~ 188 (199)
T PRK07578 136 VKAAALELPRGIRINVVSPTVLTESLEK------------------Y--G--PFFPG-----FEPVPAARVALAYVRSVE 188 (199)
T ss_pred HHHHHHHccCCeEEEEEcCCcccCchhh------------------h--h--hcCCC-----CCCCCHHHHHHHHHHHhc
Confidence 7654 34788889999877432110 0 0 00111 135899999999888875
Q ss_pred HhcCCCCCCceEEe
Q 008315 318 AHAKQPSDANIYHV 331 (570)
Q Consensus 318 ~~~~~~~~~~iyn~ 331 (570)
. ...++++++
T Consensus 189 ~----~~~g~~~~~ 198 (199)
T PRK07578 189 G----AQTGEVYKV 198 (199)
T ss_pred c----ceeeEEecc
Confidence 2 223567765
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7e-11 Score=116.83 Aligned_cols=201 Identities=16% Similarity=0.182 Sum_probs=135.8
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++++++||||||.||..++++|.++|++| .++.|+++.. +++. ..|+..+ .-++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~l---iLvaR~~~kL---~~la---------~~l~~~~--------~v~v~ 59 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNL---ILVARREDKL---EALA---------KELEDKT--------GVEVE 59 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEE---EEEeCcHHHH---HHHH---------HHHHHhh--------CceEE
Confidence 4578999999999999999999999999754 6888875432 2222 2233322 24678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh----C---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW----N---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~----~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
++..|+++++ + .+.+. + .+|++||+||...+. +..++.+++|+.++..+..+... |
T Consensus 60 vi~~DLs~~~------~-~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~ 132 (265)
T COG0300 60 VIPADLSDPE------A-LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVE 132 (265)
T ss_pred EEECcCCChh------H-HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999752 2 22332 2 599999999987653 23456799999998888776643 2
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.++|...+-.. +....|
T Consensus 133 ~~~G~IiNI~S~ag~~p~--------------------------------------------------------p~~avY 156 (265)
T COG0300 133 RGAGHIINIGSAAGLIPT--------------------------------------------------------PYMAVY 156 (265)
T ss_pred cCCceEEEEechhhcCCC--------------------------------------------------------cchHHH
Confidence 134579999998766432 234689
Q ss_pred HHHHHHHHHHHH----Hh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQ----QS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~----~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
..||+..-.+-. +. ..|+.+..+-|+-+.....+ . +. . +.- ......-+...+
T Consensus 157 ~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~----~~-~-----------~~~-----~~~~~~~~~~~~ 214 (265)
T COG0300 157 SATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A----KG-S-----------DVY-----LLSPGELVLSPE 214 (265)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c----cc-c-----------ccc-----cccchhhccCHH
Confidence 999976554433 22 56899999999988775432 0 00 0 000 001123457789
Q ss_pred HHHHHHHHHHH
Q 008315 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
+||+..+.++.
T Consensus 215 ~va~~~~~~l~ 225 (265)
T COG0300 215 DVAEAALKALE 225 (265)
T ss_pred HHHHHHHHHHh
Confidence 99999999886
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.8e-11 Score=120.23 Aligned_cols=219 Identities=14% Similarity=0.144 Sum_probs=134.0
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCc--------ccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADT--------ESAALRFQNEVLAKDLFNVLKEKWGTRL 79 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~--------~~~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
++||+|+|||||| .||++++++|++.|.. |++..|.... ....+++. +.+++ .
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~---vi~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~---- 66 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGAD---IFFTYWTAYDKEMPWGVDQDEQIQLQ---------EELLK-N---- 66 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCe---EEEEecccccccccccccHHHHHHHH---------HHHHh-c----
Confidence 5789999999995 7999999999999964 4454332111 11111111 11111 1
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHH
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLV 145 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll 145 (570)
..++..+.+|++++ ++ .+.++ ..+|+|||+||..... +.++..+++|+.|+..+.
T Consensus 67 ----g~~~~~~~~D~~~~------~~-i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 135 (256)
T PRK12859 67 ----GVKVSSMELDLTQN------DA-PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLS 135 (256)
T ss_pred ----CCeEEEEEcCCCCH------HH-HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 24678899999963 22 22332 3489999999975432 235667999999998886
Q ss_pred HHHH-Hcc--CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 146 NFAK-KCV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 146 ~~a~-~~~--~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
+.+. .+. +-.++|++||.......
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 162 (256)
T PRK12859 136 SQFARGFDKKSGGRIINMTSGQFQGPM----------------------------------------------------- 162 (256)
T ss_pred HHHHHHHhhcCCeEEEEEcccccCCCC-----------------------------------------------------
Confidence 5543 221 23589999997543211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCC
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETK 297 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~ 297 (570)
.....|+.||+..+.+++.. ..++.++.++|+.|-.+... + .+...+. .. .+
T Consensus 163 ---~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------~------~~~~~~~-~~---~~---- 219 (256)
T PRK12859 163 ---VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------E------EIKQGLL-PM---FP---- 219 (256)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------H------HHHHHHH-hc---CC----
Confidence 12468999999999987765 35799999999988654211 0 1100111 01 11
Q ss_pred ceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 298 TIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 298 ~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...+...+|+|++++.++.... ..-.++++.+.++
T Consensus 220 -~~~~~~~~d~a~~~~~l~s~~~-~~~~G~~i~~dgg 254 (256)
T PRK12859 220 -FGRIGEPKDAARLIKFLASEEA-EWITGQIIHSEGG 254 (256)
T ss_pred -CCCCcCHHHHHHHHHHHhCccc-cCccCcEEEeCCC
Confidence 1124567899999988764322 2223566666543
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3e-11 Score=121.36 Aligned_cols=168 Identities=13% Similarity=0.121 Sum_probs=113.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||+++++.|++.|.. |+++.|+.... +... +.++++.+ ..++..
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~---V~~~~r~~~~~---~~~~---------~~~~~~~~-------~~~~~~ 63 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGAS---VAICGRDEERL---ASAE---------ARLREKFP-------GARLLA 63 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEE
Confidence 57899999999999999999999999964 57788864321 1111 11222221 136788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... . +.+...+++|+.|...+++.+.. + .
T Consensus 64 ~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 136 (265)
T PRK07062 64 ARCDVLDE-------ADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS 136 (265)
T ss_pred EEecCCCH-------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc
Confidence 99999953 2222322 358999999997432 1 24667789999988877776643 2 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||........ ....|+
T Consensus 137 ~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~y~ 160 (265)
T PRK07062 137 AAASIVCVNSLLALQPEP--------------------------------------------------------HMVATS 160 (265)
T ss_pred CCcEEEEeccccccCCCC--------------------------------------------------------CchHhH
Confidence 346899999976542211 124688
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.+|+..+.+++.. ..++.++.++|+.|-.+
T Consensus 161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 8888777666543 45899999999998654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.1e-11 Score=130.08 Aligned_cols=163 Identities=20% Similarity=0.218 Sum_probs=112.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++++++||||+|+||..+++.|.+.|.+ |+++.|+.... .+. ++ .++ -+..
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~---vi~~~~~~~~~----~l~-~~---------~~~----------~~~~ 259 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAH---VVCLDVPAAGE----ALA-AV---------ANR----------VGGT 259 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCccHH----HHH-HH---------HHH----------cCCe
Confidence 357899999999999999999999999854 56666653322 111 11 111 1235
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
.+.+|++++ +..+.+++ .+|+|||+|+.... .+.++..+++|+.|+.++.+++...
T Consensus 260 ~~~~Dv~~~-------~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 332 (450)
T PRK08261 260 ALALDITAP-------DAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGAL 332 (450)
T ss_pred EEEEeCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 678899953 32233332 58999999997642 2446778999999999999998763
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.+||++||........ ....|
T Consensus 333 ~~~g~iv~~SS~~~~~g~~--------------------------------------------------------~~~~Y 356 (450)
T PRK08261 333 GDGGRIVGVSSISGIAGNR--------------------------------------------------------GQTNY 356 (450)
T ss_pred cCCCEEEEECChhhcCCCC--------------------------------------------------------CChHH
Confidence 1226899999876542211 13579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEecccccc
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g 261 (570)
+.+|+..+.++... ..++++..+.|+.|-.
T Consensus 357 ~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t 391 (450)
T PRK08261 357 AASKAGVIGLVQALAPLLAERGITINAVAPGFIET 391 (450)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence 99999666666543 4589999999998754
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.5e-11 Score=115.34 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=130.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||||+||++++++|++.|+ +|+++.|+... .+++. ..+++.+.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~---~v~~~~r~~~~---~~~~~------------------------~~~~~~~~~ 51 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW---RVIATARDAAA---LAALQ------------------------ALGAEALAL 51 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC---EEEEEECCHHH---HHHHH------------------------hccceEEEe
Confidence 6899999999999999999999886 45677776422 12221 123567899
Q ss_pred cCCCCCCCCChhhhHHHH---hC--CccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHHHHc--cCceE
Q 008315 93 DISSEDLGLKDSNLKEEL---WN--ELDVMVNSAAITKF---------DERYDVAFGINTLGAIHLVNFAKKC--VKLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l---~~--~vdiVih~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~lk~ 156 (570)
|++++ +..+.+ +. .+|+|||+|+.... .+.++..+++|+.|+.++++.+... .+-.+
T Consensus 52 D~~~~-------~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ 124 (222)
T PRK06953 52 DVADP-------ASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGV 124 (222)
T ss_pred cCCCH-------HHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCe
Confidence 99963 222233 22 48999999997521 1345778999999999999988752 12246
Q ss_pred EEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 157 FVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 157 fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+|++||... ++... . .....|+.+|
T Consensus 125 iv~isS~~~~~~~~~-------~-----------------------------------------------~~~~~Y~~sK 150 (222)
T PRK06953 125 LAVLSSRMGSIGDAT-------G-----------------------------------------------TTGWLYRASK 150 (222)
T ss_pred EEEEcCccccccccc-------C-----------------------------------------------CCccccHHhH
Confidence 888887643 32210 0 0123599999
Q ss_pred HHHHHHHHHh---cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 236 TMGEMIMQQS---KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 236 ~~aE~~v~~~---~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
+..+.+++.. ..+++++.++|+.|..+... + ...++.++.+..+
T Consensus 151 ~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-----------------------------~----~~~~~~~~~~~~~ 197 (222)
T PRK06953 151 AALNDALRAASLQARHATCIALHPGWVRTDMGG-----------------------------A----QAALDPAQSVAGM 197 (222)
T ss_pred HHHHHHHHHHhhhccCcEEEEECCCeeecCCCC-----------------------------C----CCCCCHHHHHHHH
Confidence 9999998875 34678999999887654210 0 0125668888888
Q ss_pred HHHHHHhcCCCCCCceEEecc
Q 008315 313 IVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyn~~s 333 (570)
+.++.... ....+..|...+
T Consensus 198 ~~~~~~~~-~~~~~~~~~~~~ 217 (222)
T PRK06953 198 RRVIAQAT-RRDNGRFFQYDG 217 (222)
T ss_pred HHHHHhcC-cccCceEEeeCC
Confidence 88776443 233356666554
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.3e-11 Score=133.70 Aligned_cols=166 Identities=18% Similarity=0.175 Sum_probs=117.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++++++|||||||+||++++++|.+.|++ |+++.|+... .+.+.+++ +.. ..++.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~---v~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 368 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAE---VVASDIDEAA---AERTAELI---------RAA---------GAVAHA 368 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHH---------Hhc---------CCeEEE
Confidence 57899999999999999999999999964 5777886422 12222111 111 135788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|++++ +..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .
T Consensus 369 ~~~Dv~~~-------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 441 (582)
T PRK05855 369 YRVDVSDA-------DAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVER 441 (582)
T ss_pred EEcCCCCH-------HHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99999953 32334333 489999999986431 345677899999999998876432 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... ....|
T Consensus 442 ~~~g~iv~~sS~~~~~~~~--------------------------------------------------------~~~~Y 465 (582)
T PRK05855 442 GTGGHIVNVASAAAYAPSR--------------------------------------------------------SLPAY 465 (582)
T ss_pred CCCcEEEEECChhhccCCC--------------------------------------------------------CCcHH
Confidence 1 24899999987764321 23579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.||+..|.+.+.. ..|+.++++.|+.|-.+
T Consensus 466 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 466 ATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 99999888776543 45899999999998664
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-10 Score=111.61 Aligned_cols=210 Identities=17% Similarity=0.183 Sum_probs=137.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|.|+|||||+.+|.++++.|.+.|. ++.+..|+. +||+ + |..+.+ ..++.+
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~---~vvl~aRR~------drL~-~---------la~~~~-------~~~~~~ 57 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGA---KVVLAARRE------ERLE-A---------LADEIG-------AGAALA 57 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEeccH------HHHH-H---------HHHhhc-------cCceEE
Confidence 4679999999999999999999999996 557888864 3443 1 222222 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceEEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV~ 159 (570)
+..|++++.---..-.....-+.++|++||.||...-+ +.|+..+++|+.|..+..++..-. .+-..+|.
T Consensus 58 ~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN 137 (246)
T COG4221 58 LALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIIN 137 (246)
T ss_pred EeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEE
Confidence 99999953100000011112234699999999986432 458888999999999998877431 13348888
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||..-. .+| ...+.|+.||+...
T Consensus 138 ~~SiAG~---------~~y-----------------------------------------------~~~~vY~ATK~aV~ 161 (246)
T COG4221 138 LGSIAGR---------YPY-----------------------------------------------PGGAVYGATKAAVR 161 (246)
T ss_pred ecccccc---------ccC-----------------------------------------------CCCccchhhHHHHH
Confidence 8886532 122 23578999999888
Q ss_pred HHHHHh-----cCCCcEEEEeccccccCCCC--CCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 240 MIMQQS-----KENLSLVIIRPTIVSGTYKE--PFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 240 ~~v~~~-----~~~lp~~IvRPsiV~g~~~~--p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
++.... ..++.++.+-|+.|-.+.-. +..| +. .-..... .....+.-+|+|+++
T Consensus 162 ~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g--~~-----~~~~~~y------------~~~~~l~p~dIA~~V 222 (246)
T COG4221 162 AFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG--DD-----ERADKVY------------KGGTALTPEDIAEAV 222 (246)
T ss_pred HHHHHHHHHhcCCCeeEEEecCceecceecccccCCc--hh-----hhHHHHh------------ccCCCCCHHHHHHHH
Confidence 776543 46799999999999554221 1122 00 0011100 112457789999999
Q ss_pred HHHHHHhc
Q 008315 313 IVAMVAHA 320 (570)
Q Consensus 313 i~a~~~~~ 320 (570)
..++..+.
T Consensus 223 ~~~~~~P~ 230 (246)
T COG4221 223 LFAATQPQ 230 (246)
T ss_pred HHHHhCCC
Confidence 99987543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4e-11 Score=117.53 Aligned_cols=161 Identities=15% Similarity=0.162 Sum_probs=110.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||||++|++++++|++.|+ +|+++.|+..... .+.+ ..++.++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~---~V~~~~r~~~~~~---~~~~-----------------------~~~~~~~~~ 52 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW---QVTATVRGPQQDT---ALQA-----------------------LPGVHIEKL 52 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC---EEEEEeCCCcchH---HHHh-----------------------ccccceEEc
Confidence 6899999999999999999999986 5678888764421 1110 134677888
Q ss_pred cCCCCCCCCChhhhHHHHhC-----CccEEEEcCccCCc-----c----cCHHHHHHHHHHHHHHHHHHHHHcc--CceE
Q 008315 93 DISSEDLGLKDSNLKEELWN-----ELDVMVNSAAITKF-----D----ERYDVAFGINTLGAIHLVNFAKKCV--KLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-----~vdiVih~Aa~v~f-----~----~~~~~~~~~Nv~gt~~ll~~a~~~~--~lk~ 156 (570)
|++++ +..+.+.+ ++|+|||+||.... . +.+...+++|+.++..+++.+.... +...
T Consensus 53 D~~d~-------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 125 (225)
T PRK08177 53 DMNDP-------ASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGV 125 (225)
T ss_pred CCCCH-------HHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCE
Confidence 99853 22223333 58999999987532 1 2345667889999999999886531 2246
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
++.+||.+..... .+. .....|+.+|+
T Consensus 126 iv~~ss~~g~~~~------~~~-----------------------------------------------~~~~~Y~~sK~ 152 (225)
T PRK08177 126 LAFMSSQLGSVEL------PDG-----------------------------------------------GEMPLYKASKA 152 (225)
T ss_pred EEEEccCcccccc------CCC-----------------------------------------------CCccchHHHHH
Confidence 7777765322110 000 11246999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
..|.+++.+ ..++.+..++|+.|-.+
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 999998765 35688999999988654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-10 Score=115.25 Aligned_cols=218 Identities=17% Similarity=0.127 Sum_probs=136.8
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.|.. |++..|+.+ ..+.+. ++ ...++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~---Vi~~~r~~~---~~~~~~-~~--------------------~~~~~ 57 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGAT---VIYTYQNDR---MKKSLQ-KL--------------------VDEED 57 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCE---EEEecCchH---HHHHHH-hh--------------------ccCce
Confidence 579999999999 79999999999999964 466666521 111111 11 01357
Q ss_pred EEEEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCc-------c----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKF-------D----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f-------~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ ++ .+.+ ...+|++||+||.... . +.++..+++|+.|+..+++.+.
T Consensus 58 ~~~~~Dl~~~------~~-v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~ 130 (252)
T PRK06079 58 LLVECDVASD------ES-IERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYAR 130 (252)
T ss_pred eEEeCCCCCH------HH-HHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHH
Confidence 7899999963 22 2222 2458999999996431 1 3466778999999999988876
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|++||....... ...
T Consensus 131 ~~~~~~g~Iv~iss~~~~~~~--------------------------------------------------------~~~ 154 (252)
T PRK06079 131 PLLNPGASIVTLTYFGSERAI--------------------------------------------------------PNY 154 (252)
T ss_pred HhcccCceEEEEeccCccccC--------------------------------------------------------Ccc
Confidence 53 223578888875432110 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|.|+.|-.+... .+.+ ...+...+.. .. + ...+.
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~~---p-----~~r~~ 218 (252)
T PRK06079 155 NVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVT---GIKG----HKDLLKESDS-RT---V-----DGVGV 218 (252)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc---cCCC----hHHHHHHHHh-cC---c-----ccCCC
Confidence 57999999999988754 45799999999999664221 1111 1111111111 11 1 12356
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|+++..++..... --.+++..+.++
T Consensus 219 ~pedva~~~~~l~s~~~~-~itG~~i~vdgg 248 (252)
T PRK06079 219 TIEEVGNTAAFLLSDLST-GVTGDIIYVDKG 248 (252)
T ss_pred CHHHHHHHHHHHhCcccc-cccccEEEeCCc
Confidence 679999999888753222 122556655443
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-11 Score=117.11 Aligned_cols=212 Identities=11% Similarity=0.047 Sum_probs=132.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++||||+|+||++++++|++.|++ |+++.|+... ..+.+. ..++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~------------------------~~~~~~~~ 52 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP---VIVSYRTHYP--AIDGLR------------------------QAGAQCIQ 52 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCchh--HHHHHH------------------------HcCCEEEE
Confidence 479999999999999999999999864 5677776532 111111 12367889
Q ss_pred ccCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c--C--ceE
Q 008315 92 GDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V--K--LKV 156 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~--~--lk~ 156 (570)
+|+++++- -....+.+ ...+|++||+||.... .+.++..+++|+.++..+.+.+... . + -.+
T Consensus 53 ~D~~~~~~---~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~ 129 (236)
T PRK06483 53 ADFSTNAG---IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASD 129 (236)
T ss_pred cCCCCHHH---HHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCce
Confidence 99995320 01111122 2358999999996422 1346778899999998887777552 1 1 347
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... .....|+.||+
T Consensus 130 iv~~ss~~~~~~~--------------------------------------------------------~~~~~Y~asKa 153 (236)
T PRK06483 130 IIHITDYVVEKGS--------------------------------------------------------DKHIAYAASKA 153 (236)
T ss_pred EEEEcchhhccCC--------------------------------------------------------CCCccHHHHHH
Confidence 9999876432110 12357999999
Q ss_pred HHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 237 MGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 237 ~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
..|.+++.+ .+++.+..|+|+.+...... + ............ + .-....+|+|+++
T Consensus 154 al~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~------~-----~~~~~~~~~~~~--~-------~~~~~~~~va~~~ 213 (236)
T PRK06483 154 ALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD------D-----AAYRQKALAKSL--L-------KIEPGEEEIIDLV 213 (236)
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCceecCCCC------C-----HHHHHHHhccCc--c-------ccCCCHHHHHHHH
Confidence 999998765 34689999999988432110 0 011111111100 0 0123468999999
Q ss_pred HHHHHHhcCCCCCCceEEeccC
Q 008315 313 IVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..++. ..--.+.++.+.++
T Consensus 214 ~~l~~---~~~~~G~~i~vdgg 232 (236)
T PRK06483 214 DYLLT---SCYVTGRSLPVDGG 232 (236)
T ss_pred HHHhc---CCCcCCcEEEeCcc
Confidence 88874 22223677777654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.2e-10 Score=112.74 Aligned_cols=228 Identities=17% Similarity=0.157 Sum_probs=137.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|.||+.+++.|++.|. +|+++.|+... .+.+.++ ++... ..++..
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~--------~~~~~~ 61 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC---HLHLVARDADA---LEALAAD---------LRAAH--------GVDVAV 61 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 4789999999999999999999999886 45777776421 1122211 11111 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh---CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHH-cc--CceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW---NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKK-CV--KLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~~--~lk~ 156 (570)
+.+|++++ +..+.++ ..+|++||+||.... . +.++..+++|+.|...+.+.+.. +. +-.+
T Consensus 62 ~~~D~~~~-------~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ 134 (259)
T PRK06125 62 HALDLSSP-------EAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGV 134 (259)
T ss_pred EEecCCCH-------HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcE
Confidence 99999953 2223333 469999999997532 1 34677789999999999887642 21 2357
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...... . .....|..+|+
T Consensus 135 iv~iss~~~~~~---------~-----------------------------------------------~~~~~y~ask~ 158 (259)
T PRK06125 135 IVNVIGAAGENP---------D-----------------------------------------------ADYICGSAGNA 158 (259)
T ss_pred EEEecCccccCC---------C-----------------------------------------------CCchHhHHHHH
Confidence 888887532110 0 11346889999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCccc-cccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVE-DLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~-~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
..+.+++.. ..++.++.+.|+.|-.+..... +.... .+.. ......+.. ..+ ..-+.+++|+|
T Consensus 159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~-----~~~~~~~~~va 228 (259)
T PRK06125 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGD-ESRWQELLA----GLP-----LGRPATPEEVA 228 (259)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCC-HHHHHHHhc----cCC-----cCCCcCHHHHH
Confidence 988887754 4579999999998876421100 00000 0000 000001100 011 11356789999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++.... ..-.+.++.+.++
T Consensus 229 ~~~~~l~~~~~-~~~~G~~i~vdgg 252 (259)
T PRK06125 229 DLVAFLASPRS-GYTSGTVVTVDGG 252 (259)
T ss_pred HHHHHHcCchh-ccccCceEEecCC
Confidence 99988774322 1223667777654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-10 Score=117.63 Aligned_cols=223 Identities=12% Similarity=0.118 Sum_probs=138.8
Q ss_pred hhhcCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 7 VEFLENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 7 ~~~~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
..++++|+++||||+ +-||.++++.|++.|.. |++..|+.. ..++++ ++ .++.
T Consensus 5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~---V~l~~r~~~---~~~~~~-~l---------~~~~--------- 59 (272)
T PRK08159 5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAE---LAFTYQGDA---LKKRVE-PL---------AAEL--------- 59 (272)
T ss_pred cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCE---EEEEcCchH---HHHHHH-HH---------HHhc---------
Confidence 457789999999997 89999999999999964 455555421 122222 11 1111
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHH
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
.....+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 60 ~~~~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 132 (272)
T PRK08159 60 GAFVAGHCDVTDE-------ASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQ 132 (272)
T ss_pred CCceEEecCCCCH-------HHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHH
Confidence 2245688999953 2223332 358999999997531 13467789999999999999
Q ss_pred HHHH-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 147 FAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 147 ~a~~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.+.. +.+-.++|.+||..... +.
T Consensus 133 ~~~~~~~~~g~Iv~iss~~~~~---------~~----------------------------------------------- 156 (272)
T PRK08159 133 RAEKLMTDGGSILTLTYYGAEK---------VM----------------------------------------------- 156 (272)
T ss_pred HHHHhcCCCceEEEEecccccc---------CC-----------------------------------------------
Confidence 8765 33335788888753211 00
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+++.. ..++.+..+.|+.|........+ ... . +....... .+ ..
T Consensus 157 p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~~~---~-~~~~~~~~---~p-----~~ 220 (272)
T PRK08159 157 PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG----DFR---Y-ILKWNEYN---AP-----LR 220 (272)
T ss_pred CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC----cch---H-HHHHHHhC---Cc-----cc
Confidence 12356999999988887654 45799999999988654221111 100 0 11110000 01 11
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
-+...+|+|++++.++.... ..-.+.++.+.++
T Consensus 221 r~~~peevA~~~~~L~s~~~-~~itG~~i~vdgG 253 (272)
T PRK08159 221 RTVTIEEVGDSALYLLSDLS-RGVTGEVHHVDSG 253 (272)
T ss_pred ccCCHHHHHHHHHHHhCccc-cCccceEEEECCC
Confidence 24667999999998875322 2224677777665
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-10 Score=117.17 Aligned_cols=222 Identities=15% Similarity=0.135 Sum_probs=138.3
Q ss_pred hcCCCEEEEECCcc-HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTG-FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTG-FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+++|+++||||+| -||.++++.|++.|+. |++..|..... +... +.+++..+ ..++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~---V~~~~~~~~~~---~~~~---------~~~~~~~~-------~~~~ 71 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR---VVISDIHERRL---GETA---------DELAAELG-------LGRV 71 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHH---------HHHHHhcC-------CceE
Confidence 56789999999998 5999999999999965 46666653221 1111 11222111 1467
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHHc-c
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKKC-V 152 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (570)
..+.+|++++ +..+.++ ..+|+|||+||.... . +.++..+++|+.|+..+++.+... .
T Consensus 72 ~~~~~Dl~~~-------~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 144 (262)
T PRK07831 72 EAVVCDVTSE-------AQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMR 144 (262)
T ss_pred EEEEccCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8899999953 2223333 368999999996431 1 346677899999999998887542 1
Q ss_pred --C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 153 --K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 153 --~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+ -.++|.+||....... ....
T Consensus 145 ~~~~~g~iv~~ss~~~~~~~--------------------------------------------------------~~~~ 168 (262)
T PRK07831 145 ARGHGGVIVNNASVLGWRAQ--------------------------------------------------------HGQA 168 (262)
T ss_pred hcCCCcEEEEeCchhhcCCC--------------------------------------------------------CCCc
Confidence 1 3578888775432111 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..++.+.+++|+.+..+..+- . . .......+.... ...-+..
T Consensus 169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~---~----~-~~~~~~~~~~~~---------~~~r~~~ 231 (262)
T PRK07831 169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK---V----T-SAELLDELAARE---------AFGRAAE 231 (262)
T ss_pred chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc---c----c-CHHHHHHHHhcC---------CCCCCcC
Confidence 7999999999998765 357999999999987753211 0 0 111111111111 0122456
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEecc
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s 333 (570)
.+++|++++..+..... .-.|+++.+.+
T Consensus 232 p~~va~~~~~l~s~~~~-~itG~~i~v~~ 259 (262)
T PRK07831 232 PWEVANVIAFLASDYSS-YLTGEVVSVSS 259 (262)
T ss_pred HHHHHHHHHHHcCchhc-CcCCceEEeCC
Confidence 78999999887753321 22356665544
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.1e-10 Score=115.07 Aligned_cols=223 Identities=15% Similarity=0.139 Sum_probs=137.1
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.|..| ++..|+.......+.+. ++ .++ ..++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v---~~~~~~~~~~~~~~~~~-~~---------~~~---------~~~~ 61 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAEL---GITYLPDEKGRFEKKVR-EL---------TEP---------LNPS 61 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEE---EEEecCcccchHHHHHH-HH---------Hhc---------cCcc
Confidence 478999999986 799999999999999754 55555433211222222 11 111 1235
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-------FD----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ +..+.++ ..+|++||+||... +. +.++..+++|+.|+..+++.+.
T Consensus 62 ~~~~~Dl~d~-------~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~ 134 (258)
T PRK07370 62 LFLPCDVQDD-------AQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAK 134 (258)
T ss_pred eEeecCcCCH-------HHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHH
Confidence 6788999963 2223332 35899999999642 21 3456778999999999988775
Q ss_pred H-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..-.++|++||...... + ...
T Consensus 135 ~~m~~~g~Iv~isS~~~~~~---------~-----------------------------------------------~~~ 158 (258)
T PRK07370 135 PLMSEGGSIVTLTYLGGVRA---------I-----------------------------------------------PNY 158 (258)
T ss_pred HHHhhCCeEEEEeccccccC---------C-----------------------------------------------ccc
Confidence 4 322258999998643211 0 113
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.|-.+......+. ......... . . ....+.
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~-------~~~~~~~~~-~---~-----p~~r~~ 222 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGI-------LDMIHHVEE-K---A-----PLRRTV 222 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccc-------hhhhhhhhh-c---C-----CcCcCC
Confidence 57999999999988764 4579999999999876532111110 011111110 0 0 112345
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+++++..++..... --.++++.+.++
T Consensus 223 ~~~dva~~~~fl~s~~~~-~~tG~~i~vdgg 252 (258)
T PRK07370 223 TQTEVGNTAAFLLSDLAS-GITGQTIYVDAG 252 (258)
T ss_pred CHHHHHHHHHHHhChhhc-cccCcEEEECCc
Confidence 669999999988753322 123566666543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.3e-11 Score=119.25 Aligned_cols=137 Identities=23% Similarity=0.264 Sum_probs=93.2
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+.++||.|+|||||..||.+++..|.+.|. ++++++|...... ++.++ +++..+ .+++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~---~l~lvar~~rrl~---~v~~~---------l~~~~~-------~~~v 65 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGA---KLVLVARRARRLE---RVAEE---------LRKLGS-------LEKV 65 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCC---ceEEeehhhhhHH---HHHHH---------HHHhCC-------cCcc
Confidence 457899999999999999999999999994 4567777765432 32211 222222 1269
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c--CceEE
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V--KLKVF 157 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~--~lk~f 157 (570)
.++.+|+++.+--...-++...-+.++|+.||.||..... +..+..+++|+.|+-.+.++|... + +-.++
T Consensus 66 ~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhI 145 (282)
T KOG1205|consen 66 LVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHI 145 (282)
T ss_pred EEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeE
Confidence 9999999963211100011112345799999999986532 235667899999999999988543 2 33689
Q ss_pred EEEeccccc
Q 008315 158 VHVSTAYVA 166 (570)
Q Consensus 158 V~vSTa~v~ 166 (570)
|.+||..-+
T Consensus 146 VvisSiaG~ 154 (282)
T KOG1205|consen 146 VVISSIAGK 154 (282)
T ss_pred EEEeccccc
Confidence 999987643
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.9e-10 Score=116.43 Aligned_cols=220 Identities=15% Similarity=0.103 Sum_probs=135.3
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+++||||+ +.||.++++.|++.|.. |++..|+.. ..+++. ++ .++.+ .+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~---Vil~~r~~~---~~~~~~-~~---------~~~~~--------~~- 57 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAE---LAFTYLNEA---LKKRVE-PI---------AQELG--------SD- 57 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEEecCHH---HHHHHH-HH---------HHhcC--------Cc-
Confidence 368999999997 79999999999999964 466667532 112222 11 11111 22
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-------FD----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ +..+.++ ..+|++||+||... +. +.++..+++|+.|+..+.+.+.
T Consensus 58 ~~~~~Dv~d~-------~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (274)
T PRK08415 58 YVYELDVSKP-------EHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALL 130 (274)
T ss_pred eEEEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHH
Confidence 5688999963 2222332 35899999999642 11 3467789999999999988776
Q ss_pred H-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..-.++|++||....... ...
T Consensus 131 p~m~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~ 154 (274)
T PRK08415 131 PLLNDGASVLTLSYLGGVKYV--------------------------------------------------------PHY 154 (274)
T ss_pred HHhccCCcEEEEecCCCccCC--------------------------------------------------------Ccc
Confidence 4 3222579999986432110 113
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|-|+.|..+.....+ + ... ........ .+ ..-+.
T Consensus 155 ~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~---~----~~~-~~~~~~~~---~p-----l~r~~ 218 (274)
T PRK08415 155 NVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG---D----FRM-ILKWNEIN---AP-----LKKNV 218 (274)
T ss_pred hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc---h----hhH-Hhhhhhhh---Cc-----hhccC
Confidence 46999999988887764 45789999999988654221110 0 000 00000000 01 11235
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|||++++.++..... --.+.++.+.++
T Consensus 219 ~pedva~~v~fL~s~~~~-~itG~~i~vdGG 248 (274)
T PRK08415 219 SIEEVGNSGMYLLSDLSS-GVTGEIHYVDAG 248 (274)
T ss_pred CHHHHHHHHHHHhhhhhh-cccccEEEEcCc
Confidence 679999999888764322 123667766665
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.9e-10 Score=110.04 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=78.2
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++-+++|+++||||||+||++++++|+++|.+ |+++.|++... .. .. . ...
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~---Vi~~~r~~~~~-----~~-~~------------~--------~~~ 59 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAK---VIGLTHSKINN-----SE-SN------------D--------ESP 59 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCE---EEEEECCchhh-----hh-hh------------c--------cCC
Confidence 34568999999999999999999999999964 56777765211 11 00 0 011
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
...+.+|+++ .+..+..+.++|++||+||.... .+.++..+++|+.|+.++++.+..
T Consensus 60 ~~~~~~D~~~-------~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 60 NEWIKWECGK-------EESLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred CeEEEeeCCC-------HHHHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2567899984 33344667889999999997432 234677899999999999998765
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-10 Score=120.99 Aligned_cols=107 Identities=17% Similarity=0.301 Sum_probs=77.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|.+.|. +|+++.|++.. +...+ . +. ..++..
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~---~Vi~l~r~~~~------l~~~~---------~-~~--------~~~v~~ 228 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA---KVVALTSNSDK------ITLEI---------N-GE--------DLPVKT 228 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHHH---------h-hc--------CCCeEE
Confidence 4789999999999999999999999986 45677775321 11000 0 00 124677
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc----cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD----ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~----~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
+.+|+++ ++.....++++|++||+||..... +.++..+++|+.|+.++++++..
T Consensus 229 v~~Dvsd-------~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 229 LHWQVGQ-------EAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred EEeeCCC-------HHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899994 343456778999999999864322 34567799999999999998754
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.8e-10 Score=115.97 Aligned_cols=224 Identities=13% Similarity=0.093 Sum_probs=131.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||+|+||++++++|+++|.. |+++.|..... .+.+.+ .+.... ..++..+.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~---V~~~~~~~~~~--~~~~~~---------~l~~~~--------~~~~~~~~~ 59 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR---VVLHYHRSAAA--ASTLAA---------ELNARR--------PNSAVTCQA 59 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe---EEEEcCCcHHH--HHHHHH---------HHHhcc--------CCceEEEEc
Confidence 58999999999999999999999965 45666643211 111111 111111 135677899
Q ss_pred cCCCCCCCCC-hhhhHHHH---hCCccEEEEcCccCCc------c-c-----------CHHHHHHHHHHHHHHHHHHHHH
Q 008315 93 DISSEDLGLK-DSNLKEEL---WNELDVMVNSAAITKF------D-E-----------RYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 93 Dl~~~~lgls-~~~~~~~l---~~~vdiVih~Aa~v~f------~-~-----------~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
|++++.--.. -++..+.+ ...+|+|||+||.... + + .+...+++|+.|+..+.+.+..
T Consensus 60 Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 139 (267)
T TIGR02685 60 DLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQ 139 (267)
T ss_pred cCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 9996421000 01111111 2469999999996421 1 1 2556799999999999887643
Q ss_pred c-cC--------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccc
Q 008315 151 C-VK--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 151 ~-~~--------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
. ++ -..+|.+||...... .
T Consensus 140 ~~~~~~~~~~~~~~~iv~~~s~~~~~~---------~------------------------------------------- 167 (267)
T TIGR02685 140 RQAGTRAEQRSTNLSIVNLCDAMTDQP---------L------------------------------------------- 167 (267)
T ss_pred HhhhcccccCCCCeEEEEehhhhccCC---------C-------------------------------------------
Confidence 2 11 124555555432110 0
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCC
Q 008315 222 AKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
...+.|+.||+..|.+++.. ..++.++.|+|+.+..+...+ . .....+.. .. +.
T Consensus 168 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~------~~~~~~~~-~~---~~-- 226 (267)
T TIGR02685 168 ----LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----F------EVQEDYRR-KV---PL-- 226 (267)
T ss_pred ----cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----h------hHHHHHHH-hC---CC--
Confidence 12457999999999998765 357999999999886432110 0 11111111 11 00
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.......++++++++.++.... ..-.+.++.+.++
T Consensus 227 --~~~~~~~~~va~~~~~l~~~~~-~~~~G~~~~v~gg 261 (267)
T TIGR02685 227 --GQREASAEQIADVVIFLVSPKA-KYITGTCIKVDGG 261 (267)
T ss_pred --CcCCCCHHHHHHHHHHHhCccc-CCcccceEEECCc
Confidence 0123577999999998875322 2223667777654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-10 Score=115.68 Aligned_cols=247 Identities=12% Similarity=0.087 Sum_probs=137.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+++|||| |+||+++++.|. +|. +|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~---~Vv~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~~~ 55 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK---KVLLADYNEEN---LEAAAKT---------LREA---------GFDVSTQE 55 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCeEEEEE
Confidence 578999998 799999999996 674 56788885422 1111111 1110 13678899
Q ss_pred ccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEEeccc
Q 008315 92 GDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHVSTAY 164 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~vSTa~ 164 (570)
+|++++ +..+.++ ..+|++||+||.....+.++..+++|+.|+.++++.+... ..-.+.|.+||..
T Consensus 56 ~Dv~d~-------~~i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 56 VDVSSR-------ESVKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred eecCCH-------HHHHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 999953 2223333 3589999999986555678889999999999999988653 2113456677654
Q ss_pred ccCCCCCeecc--ccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 165 VAGERTGLILE--NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 165 v~~~~~g~i~E--~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
...... ...+ .... ..+. ..+.. +.. ..+.........|+.||+..+.+.
T Consensus 129 ~~~~~~-~~~~~~~~~~---~~~~---------------------~~~~~-~~~--~~~~~~~~~~~~Y~asKaa~~~~~ 180 (275)
T PRK06940 129 GHRLPA-LTAEQERALA---TTPT---------------------EELLS-LPF--LQPDAIEDSLHAYQIAKRANALRV 180 (275)
T ss_pred cccCcc-cchhhhcccc---cccc---------------------ccccc-ccc--ccccccCCccchhHHHHHHHHHHH
Confidence 432110 0000 0000 0000 00000 000 000000012467999999988887
Q ss_pred HHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 243 QQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 243 ~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+.. ..++.+..|.|+.|-.+.... .+.+. . ......... . .+ ..-+...+++|+++..++.
T Consensus 181 ~~la~e~~~~gIrvn~i~PG~v~T~~~~~--~~~~~-~--~~~~~~~~~-~---~p-----~~r~~~peeia~~~~fL~s 246 (275)
T PRK06940 181 MAEAVKWGERGARINSISPGIISTPLAQD--ELNGP-R--GDGYRNMFA-K---SP-----AGRPGTPDEIAALAEFLMG 246 (275)
T ss_pred HHHHHHHccCCeEEEEeccCcCcCccchh--hhcCC-c--hHHHHHHhh-h---CC-----cccCCCHHHHHHHHHHHcC
Confidence 643 457999999999987653211 00000 0 000111100 0 11 1125677999999888774
Q ss_pred HhcCCCCCCceEEeccC
Q 008315 318 AHAKQPSDANIYHVGSS 334 (570)
Q Consensus 318 ~~~~~~~~~~iyn~~s~ 334 (570)
.... --.+.++.+.++
T Consensus 247 ~~~~-~itG~~i~vdgg 262 (275)
T PRK06940 247 PRGS-FITGSDFLVDGG 262 (275)
T ss_pred cccC-cccCceEEEcCC
Confidence 3221 223566766554
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.5e-10 Score=113.38 Aligned_cols=220 Identities=15% Similarity=0.124 Sum_probs=135.4
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.|.. |++..|+.+.....+++. ++. ..+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~---v~l~~r~~~~~~~~~~~~-------------~~~---------~~~ 62 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAE---LAVTYLNDKARPYVEPLA-------------EEL---------DAP 62 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCE---EEEEeCChhhHHHHHHHH-------------Hhh---------ccc
Confidence 589999999998 58999999999999964 566677543211112211 111 234
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ ++ .+.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 63 ~~~~~D~~~~------~~-v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~ 135 (258)
T PRK07533 63 IFLPLDVREP------GQ-LEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAE 135 (258)
T ss_pred eEEecCcCCH------HH-HHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 5788999963 22 22322 358999999996431 13467789999999999999775
Q ss_pred H-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +.+-.++|.+||...... . ...
T Consensus 136 p~m~~~g~Ii~iss~~~~~~---------~-----------------------------------------------~~~ 159 (258)
T PRK07533 136 PLMTNGGSLLTMSYYGAEKV---------V-----------------------------------------------ENY 159 (258)
T ss_pred HHhccCCEEEEEeccccccC---------C-----------------------------------------------ccc
Confidence 4 322247888887543210 0 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|.|+.|-.+..+. + ............ . .+ ...+.
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~---~----~~~~~~~~~~~~-~---~p-----~~r~~ 223 (258)
T PRK07533 160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG---I----DDFDALLEDAAE-R---AP-----LRRLV 223 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc---c----CCcHHHHHHHHh-c---CC-----cCCCC
Confidence 57999999988887654 457999999999886643211 1 000111111111 0 11 12346
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+++|++++.++..... .-.+.++.+.++
T Consensus 224 ~p~dva~~~~~L~s~~~~-~itG~~i~vdgg 253 (258)
T PRK07533 224 DIDDVGAVAAFLASDAAR-RLTGNTLYIDGG 253 (258)
T ss_pred CHHHHHHHHHHHhChhhc-cccCcEEeeCCc
Confidence 778999999888753221 223566666543
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.9e-11 Score=107.96 Aligned_cols=168 Identities=21% Similarity=0.213 Sum_probs=127.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++++++||.||||-.|+.|++.++++ +..++||++.|.+-...+ ...++..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~a----------------------------t~k~v~q 66 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPA----------------------------TDKVVAQ 66 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCcc----------------------------ccceeee
Confidence 57899999999999999999999986 577999999997632111 1255677
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
+..|.++ -++. ..-.+++|+.|.|-|+++-....+-.+++.-.-...+.++|++- +++.||.+||+.+....
T Consensus 67 ~~vDf~K------l~~~-a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sS 138 (238)
T KOG4039|consen 67 VEVDFSK------LSQL-ATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSS 138 (238)
T ss_pred EEechHH------HHHH-HhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCccc
Confidence 7888874 2333 35667899999999998876666666777778888889999986 99999999999875432
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
.-.|-.+|-..|+-+.+..- -
T Consensus 139 ----------------------------------------------------------rFlY~k~KGEvE~~v~eL~F-~ 159 (238)
T KOG4039|consen 139 ----------------------------------------------------------RFLYMKMKGEVERDVIELDF-K 159 (238)
T ss_pred ----------------------------------------------------------ceeeeeccchhhhhhhhccc-c
Confidence 12377778888888776421 1
Q ss_pred cEEEEeccccccCCCCCCC-Ccccc
Q 008315 250 SLVIIRPTIVSGTYKEPFP-GWVED 273 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~-gw~~~ 273 (570)
.++|+||+.+.|...+.-+ +|..+
T Consensus 160 ~~~i~RPG~ll~~R~esr~geflg~ 184 (238)
T KOG4039|consen 160 HIIILRPGPLLGERTESRQGEFLGN 184 (238)
T ss_pred EEEEecCcceecccccccccchhhh
Confidence 5899999999998876544 45544
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.6e-10 Score=112.51 Aligned_cols=222 Identities=13% Similarity=0.091 Sum_probs=136.2
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ +-||++++++|++.|.. |++..|..+.....+.+. ++.. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~---v~~~~r~~~~~~~~~~~~-------------~~~~-------~~~~ 61 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAK---LVFTYAGERLEKEVRELA-------------DTLE-------GQES 61 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCE---EEEecCcccchHHHHHHH-------------HHcC-------CCce
Confidence 578999999997 89999999999999964 466666533222222222 1110 1467
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------c----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------D----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ +..+.++ ..+|++||+||.... . +.+...+++|+.++..+.+.+.
T Consensus 62 ~~~~~Dv~d~-------~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 134 (257)
T PRK08594 62 LLLPCDVTSD-------EEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAK 134 (257)
T ss_pred EEEecCCCCH-------HHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHH
Confidence 8899999963 2222322 358999999986431 1 2345668999999998887776
Q ss_pred H-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..-.++|++||....... ...
T Consensus 135 ~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~ 158 (257)
T PRK08594 135 KLMTEGGSIVTLTYLGGERVV--------------------------------------------------------QNY 158 (257)
T ss_pred HhcccCceEEEEcccCCccCC--------------------------------------------------------CCC
Confidence 4 3222579999986542110 113
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|.|+.|-.+.....++. . ........ . .+ ...+.
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~----~---~~~~~~~~-~---~p-----~~r~~ 222 (257)
T PRK08594 159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGF----N---SILKEIEE-R---AP-----LRRTT 222 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccc----c---HHHHHHhh-c---CC-----ccccC
Confidence 47999999999988754 3579999999998866422111100 0 00001100 0 01 11245
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+++|++++.++..... .-.+.+..+.++
T Consensus 223 ~p~~va~~~~~l~s~~~~-~~tG~~~~~dgg 252 (257)
T PRK08594 223 TQEEVGDTAAFLFSDLSR-GVTGENIHVDSG 252 (257)
T ss_pred CHHHHHHHHHHHcCcccc-cccceEEEECCc
Confidence 678999999887753221 123566666544
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.2e-10 Score=112.32 Aligned_cols=153 Identities=13% Similarity=0.069 Sum_probs=106.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++++||||+|.||+++++.|++.|++ |+++.|+.. ++. ++. ++ .++..+.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~---v~~~~r~~~------~~~-~~~---------~~----------~~~~~~~~ 51 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHK---VTLVGARRD------DLE-VAA---------KE----------LDVDAIVC 51 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCE---EEEEeCCHH------HHH-HHH---------Hh----------ccCcEEec
Confidence 36999999999999999999998864 567777532 111 110 00 13567889
Q ss_pred cCCCCCCCCChhhhHHHHh----CCccEEEEcCccC---------Cc---ccCHHHHHHHHHHHHHHHHHHHHH-ccCce
Q 008315 93 DISSEDLGLKDSNLKEELW----NELDVMVNSAAIT---------KF---DERYDVAFGINTLGAIHLVNFAKK-CVKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~----~~vdiVih~Aa~v---------~f---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk 155 (570)
|+++ ++..+.++ +.+|++||+|+.. .+ .+.++..+++|+.|+..+++++.. +..-.
T Consensus 52 D~~~-------~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g 124 (223)
T PRK05884 52 DNTD-------PASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGG 124 (223)
T ss_pred CCCC-------HHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9995 33233433 3689999999742 11 234677899999999999998865 22225
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||.. .. ....|+.||
T Consensus 125 ~Iv~isS~~---~~---------------------------------------------------------~~~~Y~asK 144 (223)
T PRK05884 125 SIISVVPEN---PP---------------------------------------------------------AGSAEAAIK 144 (223)
T ss_pred eEEEEecCC---CC---------------------------------------------------------CccccHHHH
Confidence 799998753 00 124699999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEecccccc
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g 261 (570)
+..+.+.+.. ..++.+..+.|+.|..
T Consensus 145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t 175 (223)
T PRK05884 145 AALSNWTAGQAAVFGTRGITINAVACGRSVQ 175 (223)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccCc
Confidence 9998888654 4578999999988754
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.3e-10 Score=111.34 Aligned_cols=164 Identities=16% Similarity=0.196 Sum_probs=108.8
Q ss_pred EEEEECCccHhHHHHHHHHHH----hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 14 IILVSGVTGFVAKVFIEKILR----VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~----~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.|+||||||.||.+++++|++ .|. +|+++.|+... .+.+.++ ++...+ ..++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~---~V~~~~r~~~~---~~~~~~~---------l~~~~~-------~~~v~~ 59 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS---VLVLSARNDEA---LRQLKAE---------IGAERS-------GLRVVR 59 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc---EEEEEEcCHHH---HHHHHHH---------HHhcCC-------CceEEE
Confidence 589999999999999999997 564 46777786422 1122211 221111 136788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCC-----------ccEEEEcCccCC-----cc-----cCHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNE-----------LDVMVNSAAITK-----FD-----ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~-----------vdiVih~Aa~v~-----f~-----~~~~~~~~~Nv~gt~~ll~~a 148 (570)
+.+|++++ +..+.+++. .+++||+||... +. +.++..+++|+.|+..+.+.+
T Consensus 60 ~~~Dl~~~-------~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 132 (256)
T TIGR01500 60 VSLDLGAE-------AGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSV 132 (256)
T ss_pred EEeccCCH-------HHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999953 222233221 259999999632 11 235677999999998888776
Q ss_pred HHc-c---C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccc
Q 008315 149 KKC-V---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 149 ~~~-~---~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
... . + -.++|++||.......
T Consensus 133 ~~~l~~~~~~~~~iv~isS~~~~~~~------------------------------------------------------ 158 (256)
T TIGR01500 133 LKAFKDSPGLNRTVVNISSLCAIQPF------------------------------------------------------ 158 (256)
T ss_pred HHHHhhcCCCCCEEEEECCHHhCCCC------------------------------------------------------
Confidence 542 1 1 2479999997643211
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 224 IHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.....|+.||+..+.+++.. ..++.+..+.|+.|-.+
T Consensus 159 --~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 159 --KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 12346999999999988764 35789999999988654
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.7e-10 Score=103.68 Aligned_cols=125 Identities=23% Similarity=0.321 Sum_probs=91.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|-||..+++.|+++|. .+|+++.|+ . ..++.. ++ .+.++.. ..++.++.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~--~~v~~~~r~-~---~~~~~~-~l-----~~~l~~~---------~~~~~~~~~ 59 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGA--RVVILTSRS-E---DSEGAQ-EL-----IQELKAP---------GAKITFIEC 59 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTT--EEEEEEESS-C---HHHHHH-HH-----HHHHHHT---------TSEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCc--eEEEEeeec-c---cccccc-cc-----ccccccc---------ccccccccc
Confidence 6899999999999999999999854 567888887 1 112222 11 1122211 267899999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
|+++ .+..+.++ ..+|++||+|+..... +.++..+++|+.+...+.+++.. .+-.++|
T Consensus 60 D~~~-------~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv 131 (167)
T PF00106_consen 60 DLSD-------PESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIV 131 (167)
T ss_dssp ETTS-------HHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEE
T ss_pred cccc-------cccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceE
Confidence 9995 33233433 3689999999987631 44677899999999999999988 4678999
Q ss_pred EEeccccc
Q 008315 159 HVSTAYVA 166 (570)
Q Consensus 159 ~vSTa~v~ 166 (570)
.+||....
T Consensus 132 ~~sS~~~~ 139 (167)
T PF00106_consen 132 NISSIAGV 139 (167)
T ss_dssp EEEEGGGT
T ss_pred Eecchhhc
Confidence 99997654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.2e-10 Score=111.05 Aligned_cols=220 Identities=16% Similarity=0.103 Sum_probs=134.3
Q ss_pred cCCCEEEEECC--ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGV--TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+++|||| ++.||.++++.|++.|. +|++..|++... ..+.+. ++. ..++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~---~v~l~~r~~~~~-~~~~~~-------------~~~--------~~~~ 59 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA---EVVLTGFGRALR-LTERIA-------------KRL--------PEPA 59 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC---EEEEecCccchh-HHHHHH-------------Hhc--------CCCC
Confidence 57899999999 89999999999999996 456777754211 111111 111 1346
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-------FD----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ +..+.++ ..+|++||+||... +. +.++..+++|+.|+..+.+.+.
T Consensus 60 ~~~~~Dv~~~-------~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 132 (256)
T PRK07889 60 PVLELDVTNE-------EHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALL 132 (256)
T ss_pred cEEeCCCCCH-------HHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 7889999963 2222332 36999999999752 21 2345568999999999888775
Q ss_pred H-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +.+-.++|.+|+....+ . ...
T Consensus 133 ~~m~~~g~Iv~is~~~~~~----------~-----------------------------------------------~~~ 155 (256)
T PRK07889 133 PLMNEGGSIVGLDFDATVA----------W-----------------------------------------------PAY 155 (256)
T ss_pred HhcccCceEEEEeeccccc----------C-----------------------------------------------Ccc
Confidence 4 32224678776432110 0 112
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|.|+.|-.+..+..++. ......... . .+. ...+.
T Consensus 156 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~-------~~~~~~~~~-~---~p~----~~~~~ 220 (256)
T PRK07889 156 DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGF-------ELLEEGWDE-R---APL----GWDVK 220 (256)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCc-------HHHHHHHHh-c---Ccc----ccccC
Confidence 45899999988887654 4579999999999876543222211 011111111 0 010 01246
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+++|++++.++..... .-.+.++.+.++
T Consensus 221 ~p~evA~~v~~l~s~~~~-~~tG~~i~vdgg 250 (256)
T PRK07889 221 DPTPVARAVVALLSDWFP-ATTGEIVHVDGG 250 (256)
T ss_pred CHHHHHHHHHHHhCcccc-cccceEEEEcCc
Confidence 779999999988753222 223566666544
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.5e-10 Score=116.86 Aligned_cols=235 Identities=18% Similarity=0.159 Sum_probs=137.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+..+|||+||||-+|+-+++.|+++|..| ++++|+....... .. ++ +.......
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~v---ra~VRd~~~a~~~-------~~--~~-------------~~d~~~~~ 131 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSV---RALVRDEQKAEDL-------LG--VF-------------FVDLGLQN 131 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCee---eeeccChhhhhhh-------hc--cc-------------ccccccce
Confidence 456899999999999999999999999655 6999987654321 11 00 01133455
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCc----cEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNEL----DVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~v----diVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
+..|... ..+....+.+.+ .+++-|++...-.+....-..+...|+++++++|+.+ ++++||++|+...
T Consensus 132 v~~~~~~------~~d~~~~~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~ 204 (411)
T KOG1203|consen 132 VEADVVT------AIDILKKLVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGG 204 (411)
T ss_pred eeecccc------ccchhhhhhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecC
Confidence 5555554 233333454443 4556555543222212233467889999999999998 9999999987765
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
.-... +...- ...-.+-.+|.++|..+.+
T Consensus 205 ~~~~~------------~~~~~--------------------------------------~~~~~~~~~k~~~e~~~~~- 233 (411)
T KOG1203|consen 205 TKFNQ------------PPNIL--------------------------------------LLNGLVLKAKLKAEKFLQD- 233 (411)
T ss_pred cccCC------------Cchhh--------------------------------------hhhhhhhHHHHhHHHHHHh-
Confidence 42211 00000 0011345789999999987
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
+++|.+||||+.-.-... |-..... ...-..+-++ ...-.|+-.++|+.++.++.......
T Consensus 234 -Sgl~ytiIR~g~~~~~~~----~~~~~~~----------~~~~~~~~~~--~~~~~i~r~~vael~~~all~~~~~~-- 294 (411)
T KOG1203|consen 234 -SGLPYTIIRPGGLEQDTG----GQREVVV----------DDEKELLTVD--GGAYSISRLDVAELVAKALLNEAATF-- 294 (411)
T ss_pred -cCCCcEEEeccccccCCC----Ccceecc----------cCcccccccc--ccceeeehhhHHHHHHHHHhhhhhcc--
Confidence 899999999987543221 1100000 0000011111 11136788888998888876443221
Q ss_pred CceEEeccCCCCcccHHhHHH
Q 008315 326 ANIYHVGSSLRNPVTLVSILD 346 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~ 346 (570)
-.+..+++..+.|-++.+.+.
T Consensus 295 ~k~~~~v~~~~gpg~~~~~l~ 315 (411)
T KOG1203|consen 295 KKVVELVLKPEGPGRPYKVLL 315 (411)
T ss_pred ceeEEeecCCCCCCccHHHHH
Confidence 244555554445555544443
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.4e-10 Score=113.65 Aligned_cols=220 Identities=13% Similarity=0.110 Sum_probs=134.4
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+++||||++ .||++++++|++.|..| ++..|+.. ..++++ ++ .++. ...
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V---~~~~r~~~---~~~~~~-~~---------~~~~---------g~~ 59 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAEL---AFTYQGEA---LGKRVK-PL---------AESL---------GSD 59 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEE---EEecCchH---HHHHHH-HH---------HHhc---------CCc
Confidence 5899999999997 99999999999999654 55556421 112222 11 1111 122
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
..+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+.
T Consensus 60 ~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~ 132 (271)
T PRK06505 60 FVLPCDVEDI-------ASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAA 132 (271)
T ss_pred eEEeCCCCCH-------HHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHH
Confidence 4688999953 2222332 368999999997531 13467778999999999988775
Q ss_pred H-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 K-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. |.+-.++|++||....... ...
T Consensus 133 ~~m~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~ 156 (271)
T PRK06505 133 KLMPDGGSMLTLTYGGSTRVM--------------------------------------------------------PNY 156 (271)
T ss_pred HhhccCceEEEEcCCCccccC--------------------------------------------------------Ccc
Confidence 4 3222579999886432110 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|.|+.|-.+..+.. .+ ..... ....... + ..-+.
T Consensus 157 ~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~---~~----~~~~~-~~~~~~~---p-----~~r~~ 220 (271)
T PRK06505 157 NVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI---GD----ARAIF-SYQQRNS---P-----LRRTV 220 (271)
T ss_pred chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC---cc----hHHHH-HHHhhcC---C-----ccccC
Confidence 56999999988887654 4579999999999876432111 01 00111 1111111 1 11234
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++..... --.+.+..+.++
T Consensus 221 ~peeva~~~~fL~s~~~~-~itG~~i~vdgG 250 (271)
T PRK06505 221 TIDEVGGSALYLLSDLSS-GVTGEIHFVDSG 250 (271)
T ss_pred CHHHHHHHHHHHhCcccc-ccCceEEeecCC
Confidence 568999999887753221 123566666554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.4e-10 Score=111.97 Aligned_cols=162 Identities=13% Similarity=0.066 Sum_probs=107.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||+|.||++++++|+++|+. |+++.|++.. .+...+++ ++ ..++.++.+
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~---V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~~~~ 55 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGAR---VVISSRNEEN---LEKALKEL---------KE----------YGEVYAVKA 55 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHH---------Hh----------cCCceEEEc
Confidence 57999999999999999999999964 5777776422 11111111 11 135788999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHHHH-c---c
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-----FD----ERYDVAFGINTLGAIHLVNFAKK-C---V 152 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~---~ 152 (570)
|++++ ++ .+.++ ..+|+|||+||... +. +.+...+.+|+.++..+...+.. + .
T Consensus 56 Dv~d~------~~-~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~ 128 (259)
T PRK08340 56 DLSDK------DD-LKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKK 128 (259)
T ss_pred CCCCH------HH-HHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcC
Confidence 99953 22 23333 36899999999743 11 23445578888887666554321 1 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~y~ 152 (259)
T PRK08340 129 MKGVLVYLSSVSVKEPM--------------------------------------------------------PPLVLAD 152 (259)
T ss_pred CCCEEEEEeCcccCCCC--------------------------------------------------------CCchHHH
Confidence 34689999998653211 1235699
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.||+..+.+.+.. ..++.+..+.|+.|-.+
T Consensus 153 ~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 153 VTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 9999988888764 35788999999887554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=4e-10 Score=113.21 Aligned_cols=221 Identities=16% Similarity=0.144 Sum_probs=133.7
Q ss_pred hcCCCEEEEECC--ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGV--TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++++|+++|||| ++.||++++++|++.|..| ++..|..+ ..+.++ ++ ..+. ..
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v---~~~~~~~~---~~~~~~-~~---------~~~~---------~~ 57 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAEL---AFTYVVDK---LEERVR-KM---------AAEL---------DS 57 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEE---EEEcCcHH---HHHHHH-HH---------Hhcc---------CC
Confidence 378999999997 6799999999999999654 45445321 112222 11 1111 22
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------c----cCHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------D----ERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~----~~~~~~~~~Nv~gt~~ll~~ 147 (570)
...+.+|++++ ++ .+.++ ..+|++||+||.... + +.++..+++|+.|+..+.+.
T Consensus 58 ~~~~~~Dv~~~------~~-v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~ 130 (261)
T PRK08690 58 ELVFRCDVASD------DE-INQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKA 130 (261)
T ss_pred ceEEECCCCCH------HH-HHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHH
Confidence 45788999963 22 23333 369999999998531 1 23455678999999888887
Q ss_pred HHHc-c-CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 148 AKKC-V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 148 a~~~-~-~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
+..+ . +-.++|++||.......
T Consensus 131 ~~p~m~~~~g~Iv~iss~~~~~~~-------------------------------------------------------- 154 (261)
T PRK08690 131 ARPMMRGRNSAIVALSYLGAVRAI-------------------------------------------------------- 154 (261)
T ss_pred HHHHhhhcCcEEEEEcccccccCC--------------------------------------------------------
Confidence 6542 1 22478888876543111
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+.+.. ..++.+..+.|+.|-.+... ++.+ .......+.. .. + ..
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~~---p-----~~ 218 (261)
T PRK08690 155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAAS---GIAD----FGKLLGHVAA-HN---P-----LR 218 (261)
T ss_pred CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhh---cCCc----hHHHHHHHhh-cC---C-----CC
Confidence 12356999999998877653 45799999999998664321 1111 0111111111 11 1 12
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+...+|||+++..++..... --.+.++-+.++
T Consensus 219 r~~~peevA~~v~~l~s~~~~-~~tG~~i~vdgG 251 (261)
T PRK08690 219 RNVTIEEVGNTAAFLLSDLSS-GITGEITYVDGG 251 (261)
T ss_pred CCCCHHHHHHHHHHHhCcccC-CcceeEEEEcCC
Confidence 356679999999988763322 123566666554
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.5e-10 Score=111.83 Aligned_cols=220 Identities=14% Similarity=0.134 Sum_probs=134.3
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||++ -||+++++.|++.|+.| ++..|+.+ ..+.++ ++ ..+ ..++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~v---il~~r~~~---~~~~~~-~~---------~~~---------~~~~ 58 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAEL---AFTYQNDK---LKGRVE-EF---------AAQ---------LGSD 58 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEE---EEEecchh---HHHHHH-HH---------Hhc---------cCCc
Confidence 6899999999985 89999999999999654 55556421 111221 11 111 1345
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF------------DERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~a 148 (570)
.++.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|...+.+++
T Consensus 59 ~~~~~Dl~~~-------~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 131 (262)
T PRK07984 59 IVLPCDVAED-------ASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 131 (262)
T ss_pred eEeecCCCCH-------HHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHH
Confidence 6788999953 3233333 358999999996432 1235566899999998888887
Q ss_pred HHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
..+ .+-.++|.+||....... ..
T Consensus 132 ~~~~~~~g~Iv~iss~~~~~~~--------------------------------------------------------~~ 155 (262)
T PRK07984 132 RSMLNPGSALLTLSYLGAERAI--------------------------------------------------------PN 155 (262)
T ss_pred HHHhcCCcEEEEEecCCCCCCC--------------------------------------------------------CC
Confidence 654 122578888876532110 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+++.. ..++.+..|-|+.|-.+... .+.+ .......... . .+ ..-+
T Consensus 156 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~---~p-----~~r~ 219 (262)
T PRK07984 156 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS---GIKD----FRKMLAHCEA-V---TP-----IRRT 219 (262)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh---cCCc----hHHHHHHHHH-c---CC-----CcCC
Confidence 357999999999988764 35799999999988653211 1100 0011111111 0 01 1234
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...+||+++++.++..... .-.+.++.+.++
T Consensus 220 ~~pedva~~~~~L~s~~~~-~itG~~i~vdgg 250 (262)
T PRK07984 220 VTIEDVGNSAAFLCSDLSA-GISGEVVHVDGG 250 (262)
T ss_pred CCHHHHHHHHHHHcCcccc-cccCcEEEECCC
Confidence 6679999999887753222 223566666554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.6e-10 Score=111.61 Aligned_cols=221 Identities=17% Similarity=0.138 Sum_probs=134.8
Q ss_pred hcCCCEEEEECC--ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGV--TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGa--TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++++|+++|||| ++-||.+++++|++.|..| ++..|.... .+++. ++ .++. ..
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v---~~~~~~~~~---~~~~~-~~---------~~~~---------~~ 57 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAEL---AFTYVGDRF---KDRIT-EF---------AAEF---------GS 57 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeE---EEEccchHH---HHHHH-HH---------HHhc---------CC
Confidence 468999999996 6799999999999999654 454443221 12222 11 1111 12
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF------------DERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~ 147 (570)
..++.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.++
T Consensus 58 ~~~~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~ 130 (260)
T PRK06997 58 DLVFPCDVASD-------EQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKA 130 (260)
T ss_pred cceeeccCCCH-------HHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHH
Confidence 24678999953 2233333 458999999987531 134566789999999999888
Q ss_pred HHH-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 148 AKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 148 a~~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+.. +.+-.++|++||...... + .
T Consensus 131 ~lp~m~~~g~Ii~iss~~~~~~---------~-----------------------------------------------~ 154 (260)
T PRK06997 131 ALPMLSDDASLLTLSYLGAERV---------V-----------------------------------------------P 154 (260)
T ss_pred HHHhcCCCceEEEEeccccccC---------C-----------------------------------------------C
Confidence 765 323357999987643211 0 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceee
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..+.+.+.. ..++.+..|.|+.|-..... .+.+ .......+.. . .+ ...
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~---~~~~----~~~~~~~~~~-~---~p-----~~r 218 (260)
T PRK06997 155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS---GIKD----FGKILDFVES-N---AP-----LRR 218 (260)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc---cccc----hhhHHHHHHh-c---Cc-----ccc
Confidence 2356999999998887754 45799999999988653221 1100 0011111110 1 01 113
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+...+|+++++..++..... --.+.++.+.++
T Consensus 219 ~~~pedva~~~~~l~s~~~~-~itG~~i~vdgg 250 (260)
T PRK06997 219 NVTIEEVGNVAAFLLSDLAS-GVTGEITHVDSG 250 (260)
T ss_pred cCCHHHHHHHHHHHhCcccc-CcceeEEEEcCC
Confidence 46789999999988763221 223566666554
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=9e-11 Score=110.67 Aligned_cols=224 Identities=19% Similarity=0.138 Sum_probs=154.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
..+++.|+.||.|++++......+..| -.|.|+..... .+ .....+.++.|
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~sv---gilsen~~k~~---------l~-----------------sw~~~vswh~g 103 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSV---GILSENENKQT---------LS-----------------SWPTYVSWHRG 103 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceee---eEeecccCcch---------hh-----------------CCCcccchhhc
Confidence 468899999999999999999887655 57888765321 11 12467888889
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|... .+........+..++-+++-. .+...+.++|-....+-.++|++. |+++|||+|.+.-.-.
T Consensus 104 nsfs-------sn~~k~~l~g~t~v~e~~ggf---gn~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~d~~~~---- 168 (283)
T KOG4288|consen 104 NSFS-------SNPNKLKLSGPTFVYEMMGGF---GNIILMDRINGTANINAVKAAAKA-GVPRFVYISAHDFGLP---- 168 (283)
T ss_pred cccc-------cCcchhhhcCCcccHHHhcCc---cchHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhhhcCCC----
Confidence 8873 232235557788888887753 234556788888888889999987 9999999997643211
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
+ -.+..|-.+|..||..+.... ++.-+
T Consensus 169 ----------~------------------------------------------~i~rGY~~gKR~AE~Ell~~~-~~rgi 195 (283)
T KOG4288|consen 169 ----------P------------------------------------------LIPRGYIEGKREAEAELLKKF-RFRGI 195 (283)
T ss_pred ----------C------------------------------------------ccchhhhccchHHHHHHHHhc-CCCce
Confidence 1 124589999999999888743 37789
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCC---CceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGN---LPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~---~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
|+||+.+||.. ++.|.--.+.....-+....++. +..++.-+...+..|+|++||.+.+.|+.++. |
T Consensus 196 ilRPGFiyg~R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~--------f 265 (283)
T KOG4288|consen 196 ILRPGFIYGTR--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD--------F 265 (283)
T ss_pred eeccceeeccc--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC--------c
Confidence 99999999983 34443333322222233333333 44566667788999999999999999886332 2
Q ss_pred EeccCCCCcccHHhHHHHHh
Q 008315 330 HVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~ 349 (570)
- ..+++.++.+...
T Consensus 266 ~------Gvv~i~eI~~~a~ 279 (283)
T KOG4288|consen 266 K------GVVTIEEIKKAAH 279 (283)
T ss_pred C------ceeeHHHHHHHHH
Confidence 1 2567777665543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.7e-10 Score=115.89 Aligned_cols=125 Identities=16% Similarity=0.159 Sum_probs=84.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+|+++||||||.||.++++.|++.| + +|+++.|+.... +.+.++ +.. ...++..+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~---~V~l~~r~~~~~---~~~~~~---------l~~---------~~~~~~~~ 58 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW---HVIMACRDFLKA---EQAAKS---------LGM---------PKDSYTIM 58 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC---EEEEEeCCHHHH---HHHHHH---------hcC---------CCCeEEEE
Confidence 6899999999999999999999988 5 456777764221 111111 100 02457888
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+++.. +.
T Consensus 59 ~~Dl~~~-------~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~ 131 (314)
T TIGR01289 59 HLDLGSL-------DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNS 131 (314)
T ss_pred EcCCCCH-------HHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhC
Confidence 9999953 2222222 359999999997421 134567789999999888776644 21
Q ss_pred --CceEEEEEecccccC
Q 008315 153 --KLKVFVHVSTAYVAG 167 (570)
Q Consensus 153 --~lk~fV~vSTa~v~~ 167 (570)
+-.++|++||...+.
T Consensus 132 ~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 132 PNKDKRLIIVGSITGNT 148 (314)
T ss_pred CCCCCeEEEEecCcccc
Confidence 135899999987654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=6.2e-10 Score=123.07 Aligned_cols=164 Identities=18% Similarity=0.203 Sum_probs=115.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+++||||+|.||.+++++|++.|+. |+++.|+.... +.+. ++. ..++.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~---~~~~-------------~~~--------~~~~~~ 55 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQ---VVVADRNVERA---RERA-------------DSL--------GPDHHA 55 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHH-------------HHh--------CCceeE
Confidence 36899999999999999999999999964 56777754221 1111 111 135678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-----c----ccCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-----F----DERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
+.+|++++ ++ .+.++ ..+|++||+||... + .+.++..+++|+.|+..+++++...
T Consensus 56 ~~~D~~~~------~~-~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 128 (520)
T PRK06484 56 LAMDVSDE------AQ-IREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMI 128 (520)
T ss_pred EEeccCCH------HH-HHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999963 22 22332 35899999998631 1 1346778999999999999888653
Q ss_pred -cCc-eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 -VKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 -~~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+- .++|++||....... ....
T Consensus 129 ~~~~g~~iv~isS~~~~~~~--------------------------------------------------------~~~~ 152 (520)
T PRK06484 129 EQGHGAAIVNVASGAGLVAL--------------------------------------------------------PKRT 152 (520)
T ss_pred hcCCCCeEEEECCcccCCCC--------------------------------------------------------CCCc
Confidence 122 389999987654221 1135
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.|+.||+..+.+++.. ..++.++.+.|+.|-.+.
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 7999999999987654 347999999999886543
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.6e-09 Score=108.71 Aligned_cols=221 Identities=13% Similarity=0.121 Sum_probs=134.1
Q ss_pred hcCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||+++||||++ -||+++++.|.+.|.. |++..|+.. ..+.++ ++ .++. ..
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~---v~~~~r~~~---~~~~~~-~l---------~~~~---------g~ 59 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAE---LWFTYQSEV---LEKRVK-PL---------AEEI---------GC 59 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCE---EEEEeCchH---HHHHHH-HH---------HHhc---------CC
Confidence 46789999999997 7999999999999964 455555421 122222 11 1111 12
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-------FD----ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a 148 (570)
...+.+|++++ +..+.++ ..+|++||+|+... +. +.++..+++|+.|+..+++.+
T Consensus 60 ~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 132 (260)
T PRK06603 60 NFVSELDVTNP-------KSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSA 132 (260)
T ss_pred ceEEEccCCCH-------HHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 24578999963 2223332 35899999998642 11 346778999999999998876
Q ss_pred HH-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.. +..-.++|++||...... . ..
T Consensus 133 ~~~m~~~G~Iv~isS~~~~~~---------~-----------------------------------------------~~ 156 (260)
T PRK06603 133 EALMHDGGSIVTLTYYGAEKV---------I-----------------------------------------------PN 156 (260)
T ss_pred HhhhccCceEEEEecCccccC---------C-----------------------------------------------Cc
Confidence 53 322257999998543211 0 11
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++.+..+.|+.|-.+.....+ . .......... . .+ ...+
T Consensus 157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~----~---~~~~~~~~~~-~---~p-----~~r~ 220 (260)
T PRK06603 157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG----D---FSTMLKSHAA-T---AP-----LKRN 220 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC----C---cHHHHHHHHh-c---CC-----cCCC
Confidence 357999999998887754 45799999999998654321111 0 0111111111 1 11 1123
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...+|+|++++.++..... --.+.++.+.++
T Consensus 221 ~~pedva~~~~~L~s~~~~-~itG~~i~vdgG 251 (260)
T PRK06603 221 TTQEDVGGAAVYLFSELSK-GVTGEIHYVDCG 251 (260)
T ss_pred CCHHHHHHHHHHHhCcccc-cCcceEEEeCCc
Confidence 5569999999988753221 123556666544
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.1e-09 Score=107.71 Aligned_cols=175 Identities=14% Similarity=0.113 Sum_probs=111.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc----HHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES----AALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~----~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
++||+++||||++.||.+++++|++.|. +|++..|+..+.. ..+++. ++. +.+.. . ..
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~-~~~-----~~l~~-~--------~~ 67 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA---TVYVTGRSTRARRSEYDRPETIE-ETA-----ELVTA-A--------GG 67 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEecccccccccccccchHH-HHH-----HHHHh-c--------CC
Confidence 5899999999999999999999999985 4567778643210 011111 000 11111 1 14
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcC-ccC-------Cc-c---cCHHHHHHHHHHHHHHHHH
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSA-AIT-------KF-D---ERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~A-a~v-------~f-~---~~~~~~~~~Nv~gt~~ll~ 146 (570)
++.++.+|++++ +..+.++ ..+|++||+| +.. .+ + +.+...+++|+.|+..+++
T Consensus 68 ~~~~~~~Dv~~~-------~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 140 (305)
T PRK08303 68 RGIAVQVDHLVP-------EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSH 140 (305)
T ss_pred ceEEEEcCCCCH-------HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence 577899999963 2223332 3589999999 632 11 1 2355668899999998888
Q ss_pred HHHH-cc--CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccc
Q 008315 147 FAKK-CV--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 147 ~a~~-~~--~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
++.. +. +-.++|.+||....-... .+
T Consensus 141 ~~lp~m~~~~~g~IV~isS~~~~~~~~------~~--------------------------------------------- 169 (305)
T PRK08303 141 FALPLLIRRPGGLVVEITDGTAEYNAT------HY--------------------------------------------- 169 (305)
T ss_pred HHHHHhhhCCCcEEEEECCccccccCc------CC---------------------------------------------
Confidence 7754 21 225799998853211000 00
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 224 IHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.....|+.||+..+.+.+.. ..++.+..|.|+.|-.+
T Consensus 170 --~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 170 --RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 01246999999988887653 34789999999887543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=9e-09 Score=101.96 Aligned_cols=195 Identities=15% Similarity=0.208 Sum_probs=127.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|+.||||||++.+|+.++.++.++|. ++.+-...+++... ..+ ++ ++ ..++..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~---~~vl~Din~~~~~e--tv~-~~---------~~----------~g~~~~ 90 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA---KLVLWDINKQGNEE--TVK-EI---------RK----------IGEAKA 90 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC---eEEEEeccccchHH--HHH-HH---------Hh----------cCceeE
Confidence 4789999999999999999999999985 44555565554322 111 11 00 136889
Q ss_pred EEccCCCCCCCCChhhhHH------HHhCCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHH-Hc--cC
Q 008315 90 VAGDISSEDLGLKDSNLKE------ELWNELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAK-KC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~------~l~~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~-~~--~~ 153 (570)
..+|++++ ++..+ +-..+||++||.||.+.. ++..+..+++|+.|.....++-. .| .+
T Consensus 91 y~cdis~~------eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~ 164 (300)
T KOG1201|consen 91 YTCDISDR------EEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN 164 (300)
T ss_pred EEecCCCH------HHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC
Confidence 99999973 33321 122369999999999754 24567789999999777655432 22 14
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|-++|+.-..... ....|+.
T Consensus 165 ~GHIV~IaS~aG~~g~~--------------------------------------------------------gl~~Yca 188 (300)
T KOG1201|consen 165 NGHIVTIASVAGLFGPA--------------------------------------------------------GLADYCA 188 (300)
T ss_pred CceEEEehhhhcccCCc--------------------------------------------------------cchhhhh
Confidence 46888888865432211 1346999
Q ss_pred HHHHHHHHHHHh--------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 234 TKTMGEMIMQQS--------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 234 sK~~aE~~v~~~--------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
||+.+.-.-+.. ..++.++.+-|..+-. |..++ ...-.....+++.
T Consensus 189 SK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~T-------gmf~~-------------------~~~~~~l~P~L~p 242 (300)
T KOG1201|consen 189 SKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINT-------GMFDG-------------------ATPFPTLAPLLEP 242 (300)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccc-------cccCC-------------------CCCCccccCCCCH
Confidence 998876654432 4568888888877642 11111 0111234567899
Q ss_pred HHHHHHHHHHHH
Q 008315 306 DMVVNAMIVAMV 317 (570)
Q Consensus 306 Ddva~aii~a~~ 317 (570)
++||+.++.++.
T Consensus 243 ~~va~~Iv~ai~ 254 (300)
T KOG1201|consen 243 EYVAKRIVEAIL 254 (300)
T ss_pred HHHHHHHHHHHH
Confidence 999999999886
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-08 Score=96.91 Aligned_cols=158 Identities=16% Similarity=0.235 Sum_probs=105.7
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-DTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+++||||+|-||..+++.|.+++ ..+|+++.|+. ......+.+. .+++. ..+|.++.+
T Consensus 2 tylitGG~gglg~~la~~La~~~--~~~~il~~r~~~~~~~~~~~i~----------~l~~~---------g~~v~~~~~ 60 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERG--ARRLILLGRSGAPSAEAEAAIR----------ELESA---------GARVEYVQC 60 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---SEEEEEESSGGGSTTHHHHHH----------HHHHT---------T-EEEEEE-
T ss_pred EEEEECCccHHHHHHHHHHHHcC--CCEEEEeccCCCccHHHHHHHH----------HHHhC---------CCceeeecc
Confidence 68999999999999999999987 37899999983 3333333322 22221 257899999
Q ss_pred cCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
|+++ .+..+.+++ .++.|||+|+..... +.++..+..-+.|+.+|.++.... .++.||
T Consensus 61 Dv~d-------~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i 132 (181)
T PF08659_consen 61 DVTD-------PEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFI 132 (181)
T ss_dssp -TTS-------HHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEE
T ss_pred CccC-------HHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEE
Confidence 9995 333345543 478999999986421 235666888999999999998875 889999
Q ss_pred EEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 159 HVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 159 ~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
..||... .|.. -...|+..-+.
T Consensus 133 ~~SSis~~~G~~---------------------------------------------------------gq~~YaaAN~~ 155 (181)
T PF08659_consen 133 LFSSISSLLGGP---------------------------------------------------------GQSAYAAANAF 155 (181)
T ss_dssp EEEEHHHHTT-T---------------------------------------------------------TBHHHHHHHHH
T ss_pred EECChhHhccCc---------------------------------------------------------chHhHHHHHHH
Confidence 9999765 4432 13568888888
Q ss_pred HHHHHHHh-cCCCcEEEEecc
Q 008315 238 GEMIMQQS-KENLSLVIIRPT 257 (570)
Q Consensus 238 aE~~v~~~-~~~lp~~IvRPs 257 (570)
.+.+.... ..+.|+..|.-+
T Consensus 156 lda~a~~~~~~g~~~~sI~wg 176 (181)
T PF08659_consen 156 LDALARQRRSRGLPAVSINWG 176 (181)
T ss_dssp HHHHHHHHHHTTSEEEEEEE-
T ss_pred HHHHHHHHHhCCCCEEEEEcc
Confidence 88887765 567888877744
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.3e-09 Score=102.34 Aligned_cols=167 Identities=17% Similarity=0.135 Sum_probs=105.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||++.||++++++|. +|. +|+++.|+... .+.+.++ +++.. ..++..+.+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~---~Vil~~r~~~~---~~~~~~~---------l~~~~--------~~~~~~~~~ 56 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGE---DVVLAARRPEA---AQGLASD---------LRQRG--------ATSVHVLSF 56 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCC---EEEEEeCCHHH---HHHHHHH---------HHhcc--------CCceEEEEc
Confidence 579999999999999999998 474 56777776422 1222211 22111 135788999
Q ss_pred cCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc---CceEEE
Q 008315 93 DISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV---KLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~---~lk~fV 158 (570)
|+++++- -++..+.+ ...+|++||+||..... +...+...+|+.+...++..+.. +. +-.++|
T Consensus 57 Dv~d~~~---v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv 133 (246)
T PRK05599 57 DAQDLDT---HRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIV 133 (246)
T ss_pred ccCCHHH---HHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEE
Confidence 9996421 01111122 24689999999975321 12334567888888776655422 21 125799
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
.+||....... .....|+.||+..
T Consensus 134 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~ 157 (246)
T PRK05599 134 AFSSIAGWRAR--------------------------------------------------------RANYVYGSTKAGL 157 (246)
T ss_pred EEeccccccCC--------------------------------------------------------cCCcchhhHHHHH
Confidence 99987543211 1135799999988
Q ss_pred HHHHHHh-----cCCCcEEEEeccccccC
Q 008315 239 EMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 239 E~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.+.+.. ..++.+..+-|+.|..+
T Consensus 158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 158 DAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred HHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 8777653 45788889999888654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.2e-08 Score=98.57 Aligned_cols=163 Identities=15% Similarity=0.112 Sum_probs=107.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|.+.|.. |++..|+.+. .+.+.++ +++. ..++..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~---V~~~~r~~~~---l~~~~~~---------i~~~---------~~~~~~ 58 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGAT---LILCDQDQSA---LKDTYEQ---------CSAL---------TDNVYS 58 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCE---EEEEcCCHHH---HHHHHHH---------HHhc---------CCCeEE
Confidence 47899999999999999999999999964 5677775422 1111111 1110 145677
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------C-CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHH-cc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------N-ELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKK-CV 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~-~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~~ 152 (570)
+..|++++ ++ .+.++ . .+|++||+||... +. +.+...+++|+.++..+++.+.. +.
T Consensus 59 ~~~D~~~~------~~-~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~ 131 (227)
T PRK08862 59 FQLKDFSQ------ES-IRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMR 131 (227)
T ss_pred EEccCCCH------HH-HHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 88999853 22 22222 3 6999999997432 22 23445677898888877665543 21
Q ss_pred ---CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 153 ---KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 153 ---~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+-..+|++||..... ...
T Consensus 132 ~~~~~g~Iv~isS~~~~~-----------------------------------------------------------~~~ 152 (227)
T PRK08862 132 KRNKKGVIVNVISHDDHQ-----------------------------------------------------------DLT 152 (227)
T ss_pred hcCCCceEEEEecCCCCC-----------------------------------------------------------Ccc
Confidence 135789998743210 124
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.|..||+..+.+.+.. ..++.+..|.|+.|-..
T Consensus 153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 5899999888877653 45799999999988665
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.2e-09 Score=105.98 Aligned_cols=120 Identities=17% Similarity=0.170 Sum_probs=79.9
Q ss_pred EEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 16 LVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 16 lITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
+||||||.||.+++++|+++| + +|++..|+... .+.+.+++ .. ...++.++..|+
T Consensus 1 lITGas~GIG~aia~~l~~~G~~---~V~~~~r~~~~---~~~~~~~l---------~~---------~~~~~~~~~~Dl 56 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW---HVVMACRDFLK---AERAAKSA---------GM---------PKDSYTVMHLDL 56 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC---EEEEEeCCHHH---HHHHHHHh---------cC---------CCCeEEEEEecC
Confidence 699999999999999999988 5 45677775321 11111111 00 024678889999
Q ss_pred CCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHH-cc--C--c
Q 008315 95 SSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKK-CV--K--L 154 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~-~~--~--l 154 (570)
++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+..+++.+.. +. + -
T Consensus 57 ~d-------~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~ 129 (308)
T PLN00015 57 AS-------LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPS 129 (308)
T ss_pred CC-------HHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCC
Confidence 95 33222332 358999999997421 134567899999998888776543 21 2 3
Q ss_pred eEEEEEeccccc
Q 008315 155 KVFVHVSTAYVA 166 (570)
Q Consensus 155 k~fV~vSTa~v~ 166 (570)
.++|++||...+
T Consensus 130 g~IV~vsS~~~~ 141 (308)
T PLN00015 130 KRLIIVGSITGN 141 (308)
T ss_pred CEEEEEeccccc
Confidence 589999997654
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.4e-08 Score=98.64 Aligned_cols=171 Identities=21% Similarity=0.281 Sum_probs=118.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||.++||||+.-||++++++|.+.| .+|++..|+....... ..++.. .. ....++.+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~G---a~v~i~~r~~~~~~~~---~~~~~~---------~~------~~~~~~~~ 64 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAG---AKVVITGRSEERLEET---AQELGG---------LG------YTGGKVLA 64 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHH---HHHHHh---------cC------CCCCeeEE
Confidence 689999999999999999999999999 4567777765432111 101111 00 01357899
Q ss_pred EEccCCCCCCCCChhhhHHHH--------hCCccEEEEcCccCCcc--------cCHHHHHHHHHHH-HHHHHHHHHHcc
Q 008315 90 VAGDISSEDLGLKDSNLKEEL--------WNELDVMVNSAAITKFD--------ERYDVAFGINTLG-AIHLVNFAKKCV 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l--------~~~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~g-t~~ll~~a~~~~ 152 (570)
+.+|++++ ++ .+.+ ..++|+++|+||..... +.++..+++|+.| +..+...|..+.
T Consensus 65 ~~~Dv~~~------~~-~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~ 137 (270)
T KOG0725|consen 65 IVCDVSKE------VD-VEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPML 137 (270)
T ss_pred EECcCCCH------HH-HHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHH
Confidence 99999952 22 1222 34699999999986532 4577889999995 777777776551
Q ss_pred ---CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 153 ---KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 153 ---~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+-..++.+||........ ..+.
T Consensus 138 ~~~~gg~I~~~ss~~~~~~~~-------------------------------------------------------~~~~ 162 (270)
T KOG0725|consen 138 KKSKGGSIVNISSVAGVGPGP-------------------------------------------------------GSGV 162 (270)
T ss_pred HhcCCceEEEEeccccccCCC-------------------------------------------------------CCcc
Confidence 334677777775443211 1226
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.|+.||+.-+++.+.. ..++++..+-|+.|..+.
T Consensus 163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 7999999999988764 558999999999998875
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.9e-08 Score=103.09 Aligned_cols=181 Identities=21% Similarity=0.254 Sum_probs=119.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-DTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+.+++++|||||..||.+.+++|.++| .+|++..|+. ....+.+++. ++. ...++
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~G---a~Vv~~~R~~~~~~~~~~~i~-------------~~~-------~~~~i 88 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRG---AHVVLACRNEERGEEAKEQIQ-------------KGK-------ANQKI 88 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHHHH-------------hcC-------CCCce
Confidence 3578999999999999999999999998 5678999985 3333333322 211 13678
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c-cCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D-ERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~-~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
.++..|+++. +...... ...|+.|+.||...- . +..+..+.+|..|...|.++.... +
T Consensus 89 ~~~~lDLssl-------~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s 161 (314)
T KOG1208|consen 89 RVIQLDLSSL-------KSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRS 161 (314)
T ss_pred EEEECCCCCH-------HHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhC
Confidence 9999999953 2222332 358999999998632 1 457788999999988877765431 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
...|+|.+||..- +... +. ..++.+. . ........|.
T Consensus 162 ~~~RIV~vsS~~~-~~~~-----~~----~~l~~~~--------------------~-------------~~~~~~~~Y~ 198 (314)
T KOG1208|consen 162 APSRIVNVSSILG-GGKI-----DL----KDLSGEK--------------------A-------------KLYSSDAAYA 198 (314)
T ss_pred CCCCEEEEcCccc-cCcc-----ch----hhccchh--------------------c-------------cCccchhHHH
Confidence 2269999999764 1110 00 0000000 0 0001223599
Q ss_pred HHHHHHHHHHHHh----cCCCcEEEEeccccccC
Q 008315 233 FTKTMGEMIMQQS----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 233 ~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~ 262 (570)
.||..-.....+. ..++.+..+.||.|.++
T Consensus 199 ~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 199 LSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred HhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 9998776666554 44788999999999876
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.6e-08 Score=97.27 Aligned_cols=170 Identities=21% Similarity=0.300 Sum_probs=110.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc-CceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS-EKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~-~kv~ 88 (570)
+++++||||||++.||++++++|++.|.. ++++.|..... ..+.+.+.. . .. . ..+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~---v~~~~~~~~~~-~~~~~~~~~---------~-~~--------~~~~~~ 60 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGAR---VVVAARRSEEE-AAEALAAAI---------K-EA--------GGGRAA 60 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCe---EEEEcCCCchh-hHHHHHHHH---------H-hc--------CCCcEE
Confidence 46899999999999999999999988854 35666654432 111111000 0 00 0 3577
Q ss_pred EEEccCCC-CCCCCChhhhHHHH---hCCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 89 FVAGDISS-EDLGLKDSNLKEEL---WNELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 89 ~v~gDl~~-~~lgls~~~~~~~l---~~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
+...|+++ +.- -....+.+ ...+|+++|+||... +. +.++..+++|+.|...+.+++.....-++
T Consensus 61 ~~~~Dvs~~~~~---v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 137 (251)
T COG1028 61 AVAADVSDDEES---VEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQR 137 (251)
T ss_pred EEEecCCCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCe
Confidence 88899995 210 00111122 234899999999753 22 45677899999999998885544211128
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||.... ...+ ....|..||+
T Consensus 138 Iv~isS~~~~-~~~~-------------------------------------------------------~~~~Y~~sK~ 161 (251)
T COG1028 138 IVNISSVAGL-GGPP-------------------------------------------------------GQAAYAASKA 161 (251)
T ss_pred EEEECCchhc-CCCC-------------------------------------------------------CcchHHHHHH
Confidence 9999987654 3210 0257999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccc
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVS 260 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~ 260 (570)
..+.+.... ..++.+..+-|+.+-
T Consensus 162 al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 162 ALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 988877654 357889999999544
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.1e-07 Score=95.47 Aligned_cols=241 Identities=12% Similarity=0.058 Sum_probs=134.5
Q ss_pred cCCCEEEEECC--ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGV--TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++|||| +..||.++++.|.+.|..| ++ .|..... +++.+++.+. -++.++.. +. ....+..
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~V---v~-~~~~~~l---~~~~~~~~~~-~~~~~~~~-~~---~~~~~~~ 74 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEI---LV-GTWVPAL---NIFETSLRRG-KFDESRKL-PD---GSLMEIT 74 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEE---EE-EeCcchh---hHHHHhhhcc-ccchhhhc-cc---ccccCcC
Confidence 68999999999 7999999999999999654 34 5643322 2222222110 01111111 00 0001124
Q ss_pred EEEEccC--CCCC-CCC----------ChhhhHHHHh-------CCccEEEEcCccC-----Ccc----cCHHHHHHHHH
Q 008315 88 TFVAGDI--SSED-LGL----------KDSNLKEELW-------NELDVMVNSAAIT-----KFD----ERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl--~~~~-lgl----------s~~~~~~~l~-------~~vdiVih~Aa~v-----~f~----~~~~~~~~~Nv 138 (570)
..+.+|+ ++++ +.- ++++..+.++ ..+|++||+||.. .+. +.++..+++|+
T Consensus 75 ~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~ 154 (303)
T PLN02730 75 KVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASS 154 (303)
T ss_pred eeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHh
Confidence 5678888 3222 000 0111122222 3589999999642 121 45778899999
Q ss_pred HHHHHHHHHHHH-ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhc
Q 008315 139 LGAIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~~a~~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+..+++.+.. |..-.++|++||........
T Consensus 155 ~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p----------------------------------------------- 187 (303)
T PLN02730 155 YSFVSLLQHFGPIMNPGGASISLTYIASERIIP----------------------------------------------- 187 (303)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEechhhcCCCC-----------------------------------------------
Confidence 999999888765 32225799999865431100
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCce
Q 008315 218 GTERAKIHGWPNTYVFTKTMGEMIMQQS----K--ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPC 291 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~ 291 (570)
.....|+.||+..+.+.+.. . .++.+..|-|+.|-.+.....+ +. ......... ..
T Consensus 188 --------~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~-~~------~~~~~~~~~-~~-- 249 (303)
T PLN02730 188 --------GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG-FI------DDMIEYSYA-NA-- 249 (303)
T ss_pred --------CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc-cc------HHHHHHHHh-cC--
Confidence 11236999999999887654 2 4799999999988665332111 00 011111111 00
Q ss_pred eecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 292 LVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+ ...+...++++++++.++..... .-.+.++.+.++
T Consensus 250 -p-----l~r~~~peevA~~~~fLaS~~a~-~itG~~l~vdGG 285 (303)
T PLN02730 250 -P-----LQKELTADEVGNAAAFLASPLAS-AITGATIYVDNG 285 (303)
T ss_pred -C-----CCCCcCHHHHHHHHHHHhCcccc-CccCCEEEECCC
Confidence 1 01234568999999888753222 223566666554
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.6e-07 Score=91.45 Aligned_cols=211 Identities=16% Similarity=0.205 Sum_probs=136.1
Q ss_pred CCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCCC
Q 008315 19 GVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISS 96 (570)
Q Consensus 19 GaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
|++ +-||.+++++|++.|. +|++..|+.... .+.+ +.+.++.+ ..++.+|+++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga---~V~~~~~~~~~~--~~~~----------~~l~~~~~----------~~~~~~D~~~ 55 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGA---NVILTDRNEEKL--ADAL----------EELAKEYG----------AEVIQCDLSD 55 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTE---EEEEEESSHHHH--HHHH----------HHHHHHTT----------SEEEESCTTS
T ss_pred CCCCCCChHHHHHHHHHHCCC---EEEEEeCChHHH--HHHH----------HHHHHHcC----------CceEeecCcc
Confidence 667 9999999999999995 557888765421 1111 12333332 2359999995
Q ss_pred CCCCCChhhhHHHH-------h-CCccEEEEcCccCCc----c-------cCHHHHHHHHHHHHHHHHHHHHHc-cCceE
Q 008315 97 EDLGLKDSNLKEEL-------W-NELDVMVNSAAITKF----D-------ERYDVAFGINTLGAIHLVNFAKKC-VKLKV 156 (570)
Q Consensus 97 ~~lgls~~~~~~~l-------~-~~vdiVih~Aa~v~f----~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~ 156 (570)
++..+.+ . ..+|++||+|+.... . +.++..+++|+.++..+++.+... +.-.+
T Consensus 56 -------~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs 128 (241)
T PF13561_consen 56 -------EESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGS 128 (241)
T ss_dssp -------HHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEE
T ss_pred -------hHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3323343 3 568999999987653 1 346777999999999999988553 23368
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||....... .....|+.+|+
T Consensus 129 ii~iss~~~~~~~--------------------------------------------------------~~~~~y~~sKa 152 (241)
T PF13561_consen 129 IINISSIAAQRPM--------------------------------------------------------PGYSAYSASKA 152 (241)
T ss_dssp EEEEEEGGGTSBS--------------------------------------------------------TTTHHHHHHHH
T ss_pred cccccchhhcccC--------------------------------------------------------ccchhhHHHHH
Confidence 9999988653221 12348999999
Q ss_pred HHHHHHHHh-----c-CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 237 MGEMIMQQS-----K-ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 237 ~aE~~v~~~-----~-~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
..|.+++.. . .++++..|.|+.|..+..+ .......+....... . ...-+...+|||+
T Consensus 153 al~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~-------~~~~~~~~~~~~~~~----~-----pl~r~~~~~evA~ 216 (241)
T PF13561_consen 153 ALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTE-------RIPGNEEFLEELKKR----I-----PLGRLGTPEEVAN 216 (241)
T ss_dssp HHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHH-------HHHTHHHHHHHHHHH----S-----TTSSHBEHHHHHH
T ss_pred HHHHHHHHHHHHhccccCeeeeeecccceeccchh-------ccccccchhhhhhhh----h-----ccCCCcCHHHHHH
Confidence 999988764 4 6999999999988754221 111111222222111 1 1112457899999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++..++.+... --.|++..+.+|
T Consensus 217 ~v~fL~s~~a~-~itG~~i~vDGG 239 (241)
T PF13561_consen 217 AVLFLASDAAS-YITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHSGGGT-TGTSEEEEESTT
T ss_pred HHHHHhCcccc-CccCCeEEECCC
Confidence 99988864432 223677777665
|
... |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-08 Score=92.27 Aligned_cols=206 Identities=20% Similarity=0.270 Sum_probs=135.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++.|+.|++||+.-.||+.++..|.+.|. +|++..|.+.+ +. .|-.+.| .-|
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA---~ViAvaR~~a~------L~----------sLV~e~p--------~~I 55 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGA---QVIAVARNEAN------LL----------SLVKETP--------SLI 55 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCC---EEEEEecCHHH------HH----------HHHhhCC--------cce
Confidence 457899999999999999999999999995 55788886432 11 1222222 458
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHHHHc----cC
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITK---FD----ERYDVAFGINTLGAIHLVNFAKKC----VK 153 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~---f~----~~~~~~~~~Nv~gt~~ll~~a~~~----~~ 153 (570)
+++.+|++ +.+...+++. -+|-.+|.||..- |. +..+..+++|+.+..++.++..+. ..
T Consensus 56 ~Pi~~Dls-------~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~ 128 (245)
T KOG1207|consen 56 IPIVGDLS-------AWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI 128 (245)
T ss_pred eeeEeccc-------HHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC
Confidence 99999999 4444445444 3789999998742 32 345556788999988888774432 01
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-..+|.+||.++.-.- +..+.|..
T Consensus 129 ~GaIVNvSSqas~R~~--------------------------------------------------------~nHtvYca 152 (245)
T KOG1207|consen 129 KGAIVNVSSQASIRPL--------------------------------------------------------DNHTVYCA 152 (245)
T ss_pred CceEEEecchhccccc--------------------------------------------------------CCceEEee
Confidence 2368999987654221 22467889
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+.-+.+.+.. ...+++..+.|+.|...... ..|.|.-.. +-.+..+| .--|.-||.|
T Consensus 153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~--dnWSDP~K~---------k~mL~riP-----l~rFaEV~eV 216 (245)
T KOG1207|consen 153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGR--DNWSDPDKK---------KKMLDRIP-----LKRFAEVDEV 216 (245)
T ss_pred cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccc--cccCCchhc---------cchhhhCc-----hhhhhHHHHH
Confidence 998888876543 44688999999998765431 345543111 00111122 2246778999
Q ss_pred HHHHHHHHHHh
Q 008315 309 VNAMIVAMVAH 319 (570)
Q Consensus 309 a~aii~a~~~~ 319 (570)
+|+++..+.+.
T Consensus 217 VnA~lfLLSd~ 227 (245)
T KOG1207|consen 217 VNAVLFLLSDN 227 (245)
T ss_pred HhhheeeeecC
Confidence 99998777543
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.2e-07 Score=89.61 Aligned_cols=156 Identities=15% Similarity=0.084 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHccCc-eEEEEEecccccCCCCCeeccccCCCCCCC-ChHHHHHHHHHHHHhhhhcCCChHHHHHHHh
Q 008315 138 TLGAIHLVNFAKKCVKL-KVFVHVSTAYVAGERTGLILENPLDGASGL-DFDAEMKVIDQKLNELKTKGAPQKEITLFMK 215 (570)
Q Consensus 138 v~gt~~ll~~a~~~~~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (570)
+..|..+.++....+.. +.+|.+|...+|-... .+.|+|+.+. +.+-...+|
T Consensus 105 i~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~----s~eY~e~~~~qgfd~~srL~---------------------- 158 (315)
T KOG3019|consen 105 IRVTSKLADAINNAPQEARPTVLVSGVAVYVPSE----SQEYSEKIVHQGFDILSRLC---------------------- 158 (315)
T ss_pred eeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccc----ccccccccccCChHHHHHHH----------------------
Confidence 44578888888888755 4899999988886532 2345443322 111111111
Q ss_pred hccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecC
Q 008315 216 NLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295 (570)
Q Consensus 216 ~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~ 295 (570)
+|+ |........+..++++|.+.|.|.... .+..++..+-.|.- .-.|+
T Consensus 159 ------------------l~W--E~aA~~~~~~~r~~~iR~GvVlG~gGG----------a~~~M~lpF~~g~G-GPlGs 207 (315)
T KOG3019|consen 159 ------------------LEW--EGAALKANKDVRVALIRIGVVLGKGGG----------ALAMMILPFQMGAG-GPLGS 207 (315)
T ss_pred ------------------HHH--HHHhhccCcceeEEEEEEeEEEecCCc----------chhhhhhhhhhccC-CcCCC
Confidence 122 222222245689999999999997541 11233333333322 23488
Q ss_pred CCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++...+||+||+++.+-.+++.+.- ..|.|-+.+ ++.+..|+++.+.+.++++.
T Consensus 208 G~Q~fpWIHv~DL~~li~~ale~~~v----~GViNgvAP--~~~~n~Ef~q~lg~aL~Rp~ 262 (315)
T KOG3019|consen 208 GQQWFPWIHVDDLVNLIYEALENPSV----KGVINGVAP--NPVRNGEFCQQLGSALSRPS 262 (315)
T ss_pred CCeeeeeeehHHHHHHHHHHHhcCCC----CceecccCC--CccchHHHHHHHHHHhCCCc
Confidence 99999999999999999999874332 468998888 99999999999999988764
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=6.8e-07 Score=82.75 Aligned_cols=226 Identities=16% Similarity=0.197 Sum_probs=141.2
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
...-...+...||||+..||+++...|.++|+.| .+..+.... +++... +| |. ..
T Consensus 8 ~~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv---~v~dl~~~~--A~ata~-~L-------------~g------~~ 62 (256)
T KOG1200|consen 8 VVQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARV---AVADLDSAA--AEATAG-DL-------------GG------YG 62 (256)
T ss_pred HHHHHhcceeEEecCCchHHHHHHHHHHhcCcEE---EEeecchhh--HHHHHh-hc-------------CC------CC
Confidence 4455678999999999999999999999999754 343343332 222221 11 10 13
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.-..+.+|++++ .+. +..+ ..+++++||||+.+. .+.|++.+.+|..|+..+.+++.+.
T Consensus 63 ~h~aF~~DVS~a------~~v-~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~ 135 (256)
T KOG1200|consen 63 DHSAFSCDVSKA------HDV-QNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRA 135 (256)
T ss_pred ccceeeeccCcH------HHH-HHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHH
Confidence 456789999963 232 2322 258999999999864 3678999999999999999888653
Q ss_pred ---cCce--EEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 152 ---VKLK--VFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 152 ---~~lk--~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.+.. ++|.+||.-- -|+- -...|..
T Consensus 136 ~~~~~~~~~sIiNvsSIVGkiGN~----GQtnYAA--------------------------------------------- 166 (256)
T KOG1200|consen 136 MVMNQQQGLSIINVSSIVGKIGNF----GQTNYAA--------------------------------------------- 166 (256)
T ss_pred HHHhcCCCceEEeehhhhcccccc----cchhhhh---------------------------------------------
Confidence 2222 7999998632 2221 1222210
Q ss_pred CCCchHHHHHHHHHHHHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 226 GWPNTYVFTKTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.....-++||.+|..+.+ .++++..+-|+.|-.+..+-.| ..++..+..+....-+| ..
T Consensus 167 sK~GvIgftktaArEla~---knIrvN~VlPGFI~tpMT~~mp---------~~v~~ki~~~iPmgr~G---------~~ 225 (256)
T KOG1200|consen 167 SKGGVIGFTKTAARELAR---KNIRVNVVLPGFIATPMTEAMP---------PKVLDKILGMIPMGRLG---------EA 225 (256)
T ss_pred hcCceeeeeHHHHHHHhh---cCceEeEeccccccChhhhhcC---------HHHHHHHHccCCccccC---------CH
Confidence 012335677888777665 5899999999999887665333 23444444433322233 35
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++|+.++..+.+. ..--.+..+.++++
T Consensus 226 EevA~~V~fLAS~~-ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 226 EEVANLVLFLASDA-SSYITGTTLEVTGG 253 (256)
T ss_pred HHHHHHHHHHhccc-cccccceeEEEecc
Confidence 78999998887422 21122455555544
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.2e-07 Score=114.65 Aligned_cols=180 Identities=12% Similarity=0.135 Sum_probs=115.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc--------HHHHHHHHHhhhhhHHHHHhhh----c
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES--------AALRFQNEVLAKDLFNVLKEKW----G 76 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~--------~~~rl~~~l~~~~~f~~l~~~~----~ 76 (570)
+-+|+++|||||+|.||..++++|.+++. .+++++.|+..... ....++..+ .+.++..- |
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~g--a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~-----~~~l~~~g~~~~P 2066 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQ--AHFILAGRSSFDDNEPSWAQGKDENELKKAA-----IQHLQASGEKPTP 2066 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcC--CEEEEEeCCcccccCchhhhccchHHHHHhh-----hhhhhhccccccc
Confidence 44689999999999999999999998842 36778888731100 001111111 00100000 0
Q ss_pred --------------------ccccccccCceEEEEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCc----
Q 008315 77 --------------------TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKF---- 126 (570)
Q Consensus 77 --------------------~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f---- 126 (570)
... .....++.++.+|+++ .+..+.+++ .+|.|||+||....
T Consensus 2067 ~~i~~~~~~~~~~~ei~~~la~l-~~~G~~v~y~~~DVtD-------~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~ 2138 (2582)
T TIGR02813 2067 KKVDALVRPVLSSLEIAQALAAF-KAAGASAEYASADVTN-------SVSVAATVQPLNKTLQITGIIHGAGVLADKHIQ 2138 (2582)
T ss_pred chhhhcccccchhHHHHHHHHHH-HhcCCcEEEEEccCCC-------HHHHHHHHHHHHHhCCCcEEEECCccCCCCCcc
Confidence 000 0012468899999995 332333332 48999999997532
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc-CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhh
Q 008315 127 ---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKT 202 (570)
Q Consensus 127 ---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~-~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~ 202 (570)
.+.++..+++|+.|+.++++.+... .+++||.+||.... |..
T Consensus 2139 ~~t~e~f~~v~~~nv~G~~~Ll~al~~~-~~~~IV~~SSvag~~G~~--------------------------------- 2184 (2582)
T TIGR02813 2139 DKTLEEFNAVYGTKVDGLLSLLAALNAE-NIKLLALFSSAAGFYGNT--------------------------------- 2184 (2582)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCCCC---------------------------------
Confidence 1457778999999999999998765 55789999997653 321
Q ss_pred cCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh---cCCCcEEEEecccccc
Q 008315 203 KGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS---KENLSLVIIRPTIVSG 261 (570)
Q Consensus 203 ~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~---~~~lp~~IvRPsiV~g 261 (570)
....|+.+|...+.+.... ..++.+..+.|+.+-+
T Consensus 2185 ------------------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2185 ------------------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred ------------------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 1346999998877776654 3357788888877644
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=2e-06 Score=79.19 Aligned_cols=197 Identities=14% Similarity=0.132 Sum_probs=123.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|.||||-+|+.|+++.+++|++| .+++|++..... .+.+.+++.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeV---TAivRn~~K~~~-----------------------------~~~~~i~q~ 48 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEV---TAIVRNASKLAA-----------------------------RQGVTILQK 48 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCee---EEEEeChHhccc-----------------------------cccceeecc
Confidence 589999999999999999999999876 688998754321 256788999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+.++ +.....+.+.|+||..-+.... ++... .......+++..+.. ++.|++.|..+.+.-
T Consensus 49 Difd~-------~~~a~~l~g~DaVIsA~~~~~~-~~~~~----~~k~~~~li~~l~~a-gv~RllVVGGAGSL~----- 110 (211)
T COG2910 49 DIFDL-------TSLASDLAGHDAVISAFGAGAS-DNDEL----HSKSIEALIEALKGA-GVPRLLVVGGAGSLE----- 110 (211)
T ss_pred cccCh-------hhhHhhhcCCceEEEeccCCCC-ChhHH----HHHHHHHHHHHHhhc-CCeeEEEEcCccceE-----
Confidence 99953 3334677899999987554321 11111 222366777777776 889999998876642
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc-hHHHHHHHHHHH--HHHhcCCC
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN-TYVFTKTMGEMI--MQQSKENL 249 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~~--v~~~~~~l 249 (570)
++|..--.+.| .+|- .|..+++.||.+ ++. ...+
T Consensus 111 id~g~rLvD~p------------------------------------------~fP~ey~~~A~~~ae~L~~Lr~-~~~l 147 (211)
T COG2910 111 IDEGTRLVDTP------------------------------------------DFPAEYKPEALAQAEFLDSLRA-EKSL 147 (211)
T ss_pred EcCCceeecCC------------------------------------------CCchhHHHHHHHHHHHHHHHhh-ccCc
Confidence 22221000000 2333 356778888854 333 3459
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHh
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
.++.+-|+..+-|... .| +++. |.- .+..+... -+.|...|.|-+++.-+.++
T Consensus 148 ~WTfvSPaa~f~PGer--Tg---~yrl----------ggD-~ll~n~~G-~SrIS~aDYAiA~lDe~E~~ 200 (211)
T COG2910 148 DWTFVSPAAFFEPGER--TG---NYRL----------GGD-QLLVNAKG-ESRISYADYAIAVLDELEKP 200 (211)
T ss_pred ceEEeCcHHhcCCccc--cC---ceEe----------ccc-eEEEcCCC-ceeeeHHHHHHHHHHHHhcc
Confidence 9999999998877432 11 1111 111 12222111 24566777788888777643
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.5e-07 Score=87.86 Aligned_cols=218 Identities=18% Similarity=0.258 Sum_probs=134.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++++|||.|.||..+.++|+.+|- +.+.++-|.++ . ..+..|++-+| ..++.+
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgi--k~~~i~~~~En-~-------------~a~akL~ai~p-------~~~v~F 59 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGI--KVLVIDDSEEN-P-------------EAIAKLQAINP-------SVSVIF 59 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCc--hheeehhhhhC-H-------------HHHHHHhccCC-------CceEEE
Confidence 4799999999999999999999999874 33434434332 1 22334555555 368999
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcccCHHHHHHHHHHHHHH----HHHHHHHcc--CceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFDERYDVAFGINTLGAIH----LVNFAKKCV--KLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~----ll~~a~~~~--~lk~ 156 (570)
+..|++. ..+. +..+ ..+|++||.||... +.+++..+.+|..|.-+ .+....+-. .-.-
T Consensus 60 ~~~DVt~------~~~~-~~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGi 131 (261)
T KOG4169|consen 60 IKCDVTN------RGDL-EAAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGI 131 (261)
T ss_pred EEecccc------HHHH-HHHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcE
Confidence 9999995 2232 2333 35899999999865 55688889999876544 444443321 1235
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH-
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK- 235 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK- 235 (570)
+|.+||++-.-.- |. ...|+.||
T Consensus 132 IvNmsSv~GL~P~-------------p~-------------------------------------------~pVY~AsKa 155 (261)
T KOG4169|consen 132 IVNMSSVAGLDPM-------------PV-------------------------------------------FPVYAASKA 155 (261)
T ss_pred EEEeccccccCcc-------------cc-------------------------------------------chhhhhccc
Confidence 7888886532110 11 12355444
Q ss_pred -------HHHHHHHHHhcCCCcEEEEeccccccCCCCCC---CCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 236 -------TMGEMIMQQSKENLSLVIIRPTIVSGTYKEPF---PGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 236 -------~~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~---~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.+|.....+ +.|+.+..+.|+.+-....+.+ .+|.+--......+..+ ..-+-
T Consensus 156 GVvgFTRSla~~ayy~-~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~----------------~~q~~ 218 (261)
T KOG4169|consen 156 GVVGFTRSLADLAYYQ-RSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERA----------------PKQSP 218 (261)
T ss_pred ceeeeehhhhhhhhHh-hcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHc----------------ccCCH
Confidence 444433222 5799999999998765443333 44444322222222211 12344
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccCC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSL 335 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~~ 335 (570)
..+++.++.+++.. .++.+|-+.++.
T Consensus 219 ~~~a~~~v~aiE~~----~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 219 ACCAINIVNAIEYP----KNGAIWKVDSGS 244 (261)
T ss_pred HHHHHHHHHHHhhc----cCCcEEEEecCc
Confidence 57888889888752 347899998873
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.7e-07 Score=84.65 Aligned_cols=123 Identities=19% Similarity=0.286 Sum_probs=84.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.|-+||||||+..||..|++++++.|.. |++-.|+. +|+. +.. .+ ...+.-
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~---VIi~gR~e------~~L~-e~~---------~~---------~p~~~t 54 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNT---VIICGRNE------ERLA-EAK---------AE---------NPEIHT 54 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCE---EEEecCcH------HHHH-HHH---------hc---------Ccchhe
Confidence 36889999999999999999999999954 45666653 4444 221 11 245677
Q ss_pred EEccCCCCCCCCChhhhHHHHh----C---CccEEEEcCccCC---cc------cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW----N---ELDVMVNSAAITK---FD------ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~----~---~vdiVih~Aa~v~---f~------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
..+|+. |.+.++++. + ..+++||+||..+ |. +..++-+.+|..++.+|..+....
T Consensus 55 ~v~Dv~-------d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~ 127 (245)
T COG3967 55 EVCDVA-------DRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLL 127 (245)
T ss_pred eeeccc-------chhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 888988 444333333 2 5899999999864 21 123456899999999988776543
Q ss_pred cC-ceEEEEEecccccC
Q 008315 152 VK-LKVFVHVSTAYVAG 167 (570)
Q Consensus 152 ~~-lk~fV~vSTa~v~~ 167 (570)
.+ -..+|.|||.-.+.
T Consensus 128 ~q~~a~IInVSSGLafv 144 (245)
T COG3967 128 RQPEATIINVSSGLAFV 144 (245)
T ss_pred hCCCceEEEeccccccC
Confidence 12 24689999876554
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.2e-07 Score=91.01 Aligned_cols=163 Identities=12% Similarity=0.094 Sum_probs=100.7
Q ss_pred HHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCCCCCCCCChhhhH
Q 008315 28 FIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLK 107 (570)
Q Consensus 28 Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~ 107 (570)
++++|+++|. +|+++.|+..... ...++.+|+++ .+..
T Consensus 1 ~a~~l~~~G~---~Vv~~~r~~~~~~--------------------------------~~~~~~~Dl~~-------~~~v 38 (241)
T PRK12428 1 TARLLRFLGA---RVIGVDRREPGMT--------------------------------LDGFIQADLGD-------PASI 38 (241)
T ss_pred ChHHHHhCCC---EEEEEeCCcchhh--------------------------------hhHhhcccCCC-------HHHH
Confidence 4678888886 4567788653210 01346789984 3333
Q ss_pred HHHhC----CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEEecccccCCCCC-eeccccCCCC
Q 008315 108 EELWN----ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTG-LILENPLDGA 181 (570)
Q Consensus 108 ~~l~~----~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g-~i~E~~~~e~ 181 (570)
+.+++ ++|+|||+||... ..+++..+++|+.|+..+++++... ..-.++|++||...++.... ...|....
T Consensus 39 ~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~-- 115 (241)
T PRK12428 39 DAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAA-- 115 (241)
T ss_pred HHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhc--
Confidence 34444 5899999999764 3567888999999999999998753 22368999999987753210 00000000
Q ss_pred CCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh------cCCCcEEEEe
Q 008315 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS------KENLSLVIIR 255 (570)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~------~~~lp~~IvR 255 (570)
..+.+ +... ... . ........|+.||+..+.+.+.. ..++.+..++
T Consensus 116 -~~~~~--------------------~~~~-~~~----~--~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~ 167 (241)
T PRK12428 116 -TASFD--------------------EGAA-WLA----A--HPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVA 167 (241)
T ss_pred -cchHH--------------------HHHH-hhh----c--cCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEee
Confidence 00000 0000 000 0 00123468999999998876533 3479999999
Q ss_pred ccccccCC
Q 008315 256 PTIVSGTY 263 (570)
Q Consensus 256 PsiV~g~~ 263 (570)
|+.|.++.
T Consensus 168 PG~v~T~~ 175 (241)
T PRK12428 168 PGPVFTPI 175 (241)
T ss_pred cCCccCcc
Confidence 99998764
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-06 Score=90.05 Aligned_cols=151 Identities=11% Similarity=0.039 Sum_probs=89.8
Q ss_pred CCccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHHHH-ccCceEEEEEecccccCCCCCeeccccCCCC
Q 008315 112 NELDVMVNSAAITK-----FD----ERYDVAFGINTLGAIHLVNFAKK-CVKLKVFVHVSTAYVAGERTGLILENPLDGA 181 (570)
Q Consensus 112 ~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~ 181 (570)
..+|++||+||... +. +.++..+++|+.|+.++++++.. |..-.++|.+||........
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p----------- 186 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVP----------- 186 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCC-----------
Confidence 35999999997532 21 34677789999999999998865 32224688887754321110
Q ss_pred CCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEe
Q 008315 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----K-ENLSLVIIR 255 (570)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~lp~~IvR 255 (570)
.....|+.||+..+.+.+.. . .|+.+..|.
T Consensus 187 --------------------------------------------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~ 222 (299)
T PRK06300 187 --------------------------------------------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTIS 222 (299)
T ss_pred --------------------------------------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 11126999999998887643 2 389999999
Q ss_pred ccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 256 PTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 256 PsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+.|-.+.....+ ........... .. + .......+++++++...+..... -..++++.+.++
T Consensus 223 PG~v~T~~~~~~~-------~~~~~~~~~~~-~~---p-----~~r~~~peevA~~v~~L~s~~~~-~itG~~i~vdGG 284 (299)
T PRK06300 223 AGPLASRAGKAIG-------FIERMVDYYQD-WA---P-----LPEPMEAEQVGAAAAFLVSPLAS-AITGETLYVDHG 284 (299)
T ss_pred eCCccChhhhccc-------ccHHHHHHHHh-cC---C-----CCCCcCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 9988654321100 00011000000 11 1 11235679999998887653222 223667776554
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=8.4e-07 Score=84.31 Aligned_cols=126 Identities=15% Similarity=0.304 Sum_probs=82.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++||||||.-.||--|+++|++ -+++..|+...|..... .+.++. . ....++++++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk-~~~i~~iiat~r~~e~a--~~~l~~-k------------------~~~d~rvHii 59 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK-DKGIEVIIATARDPEKA--ATELAL-K------------------SKSDSRVHII 59 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc-CCCcEEEEEecCChHHh--hHHHHH-h------------------hccCCceEEE
Confidence 457899999999999999999996 46777776766654432 222220 0 0114789999
Q ss_pred EccCCCCCCCCChhhhHHHHh---------CCccEEEEcCccCC-cc-------cCHHHHHHHHHHHHHHHHHHH----H
Q 008315 91 AGDISSEDLGLKDSNLKEELW---------NELDVMVNSAAITK-FD-------ERYDVAFGINTLGAIHLVNFA----K 149 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~---------~~vdiVih~Aa~v~-f~-------~~~~~~~~~Nv~gt~~ll~~a----~ 149 (570)
+.|++. ++.. +.+. ++.|+.|++||... +. +.+-..+++|+.|+..+.+.. +
T Consensus 60 ~Ldvt~------deS~-~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLk 132 (249)
T KOG1611|consen 60 QLDVTC------DESI-DNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLK 132 (249)
T ss_pred EEeccc------HHHH-HHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHH
Confidence 999996 3332 2332 35799999999742 32 225566899999987766543 2
Q ss_pred Hcc----------CceEEEEEecccc
Q 008315 150 KCV----------KLKVFVHVSTAYV 165 (570)
Q Consensus 150 ~~~----------~lk~fV~vSTa~v 165 (570)
+.. +...+|.+||...
T Consensus 133 kaas~~~gd~~s~~raaIinisS~~~ 158 (249)
T KOG1611|consen 133 KAASKVSGDGLSVSRAAIINISSSAG 158 (249)
T ss_pred HHhhcccCCcccccceeEEEeecccc
Confidence 221 1236887877544
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-06 Score=87.49 Aligned_cols=165 Identities=19% Similarity=0.243 Sum_probs=108.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..+|.|||||+-...|+.|+.+|.++|..| ++-.-.+.+. +.++. +. ..++..-
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V---~Agcl~~~ga---e~L~~-------------~~-------~s~rl~t 80 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRV---FAGCLTEEGA---ESLRG-------------ET-------KSPRLRT 80 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEE---EEEeecCchH---HHHhh-------------hh-------cCCccee
Confidence 568899999999889999999999999755 5555333332 22221 10 0367788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHH----HHHHccCce
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVN----FAKKCVKLK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~----~a~~~~~lk 155 (570)
+..|+++|+.-.....+.+..++ +.=.|||+||...+- +.++..+++|..|+.++.. +.++.+ .
T Consensus 81 ~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--G 158 (322)
T KOG1610|consen 81 LQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--G 158 (322)
T ss_pred EeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--C
Confidence 89999974211111111111111 356899999965331 4577889999999777655 445543 5
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
|+|.+||..- +. +. +.-.+|..||
T Consensus 159 RvVnvsS~~G---R~------~~-----------------------------------------------p~~g~Y~~SK 182 (322)
T KOG1610|consen 159 RVVNVSSVLG---RV------AL-----------------------------------------------PALGPYCVSK 182 (322)
T ss_pred eEEEeccccc---Cc------cC-----------------------------------------------cccccchhhH
Confidence 8999998642 21 00 1245799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccc
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTI 258 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsi 258 (570)
+..|...... ..|+.+.|+-||+
T Consensus 183 ~aVeaf~D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 183 FAVEAFSDSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence 9999876543 5689999999993
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.5e-06 Score=83.23 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=86.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||+-.+|++++..+.++|.+| .++.|+++......+.- ++.. ...++.+..+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~V---ti~ar~~~kl~~a~~~l-~l~~------------------~~~~v~~~S~ 91 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADV---TITARSGKKLLEAKAEL-ELLT------------------QVEDVSYKSV 91 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCce---EEEeccHHHHHHHHhhh-hhhh------------------ccceeeEecc
Confidence 599999999999999999999999765 68899877655444322 1110 1234778889
Q ss_pred cCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC---cc----cCHHHHHHHHHHHHHHHHHHHHH-ccCce--
Q 008315 93 DISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK---FD----ERYDVAFGINTLGAIHLVNFAKK-CVKLK-- 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~---f~----~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk-- 155 (570)
|+. +-+..+.+++ .+|.+|||||..- |. +..+...++|..|+.+++.++.. |+...
T Consensus 92 d~~-------~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 92 DVI-------DYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred ccc-------cHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 996 3333333333 4799999999742 22 23566789999999999987754 44333
Q ss_pred -EEEEEecccc
Q 008315 156 -VFVHVSTAYV 165 (570)
Q Consensus 156 -~fV~vSTa~v 165 (570)
+++.+||...
T Consensus 165 g~I~~vsS~~a 175 (331)
T KOG1210|consen 165 GRIILVSSQLA 175 (331)
T ss_pred cEEEEehhhhh
Confidence 7888887654
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=8e-07 Score=83.36 Aligned_cols=122 Identities=19% Similarity=0.272 Sum_probs=83.4
Q ss_pred CCCEEEEECCc-cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVT-GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaT-GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+.|||||++ |.||.+|+.++.+.|+. ||+..|+...-. .+. ...++.+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~---V~AtaR~~e~M~---~L~-----------------------~~~gl~~ 56 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYL---VYATARRLEPMA---QLA-----------------------IQFGLKP 56 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeE---EEEEccccchHh---hHH-----------------------HhhCCee
Confidence 45899999865 99999999999999964 588888654321 111 0246889
Q ss_pred EEccCCCCCCCCChhhhH---HHHhC----CccEEEEcCccC-Cc---c---cCHHHHHHHHHHHHHHHHHHHHHc--cC
Q 008315 90 VAGDISSEDLGLKDSNLK---EELWN----ELDVMVNSAAIT-KF---D---ERYDVAFGINTLGAIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~---~~l~~----~vdiVih~Aa~v-~f---~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (570)
...|+++|+ +.. .++.. +.|+.+|.||.. .| + +..+..+++|+.|..++.++...+ +.
T Consensus 57 ~kLDV~~~~------~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika 130 (289)
T KOG1209|consen 57 YKLDVSKPE------EVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA 130 (289)
T ss_pred EEeccCChH------HHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc
Confidence 999999752 221 11222 479999999863 22 1 335667899999988887766543 12
Q ss_pred ceEEEEEecccccC
Q 008315 154 LKVFVHVSTAYVAG 167 (570)
Q Consensus 154 lk~fV~vSTa~v~~ 167 (570)
-..+|.+.|..++.
T Consensus 131 KGtIVnvgSl~~~v 144 (289)
T KOG1209|consen 131 KGTIVNVGSLAGVV 144 (289)
T ss_pred cceEEEecceeEEe
Confidence 24689998877664
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.4e-05 Score=79.96 Aligned_cols=171 Identities=15% Similarity=0.215 Sum_probs=112.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+-..|||||..|||+.+++|.++|.+ |+++.|+++. .+++.+||.+. + .-++..+.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~n---vvLIsRt~~K---L~~v~kEI~~~---------~--------~vev~~i~ 105 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFN---VVLISRTQEK---LEAVAKEIEEK---------Y--------KVEVRIIA 105 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCE---EEEEeCCHHH---HHHHHHHHHHH---------h--------CcEEEEEE
Confidence 488999999999999999999999965 5899998654 34444444321 1 24578899
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCC-----ccc----CHHHHHHHHHHHHHHHHHHHHH-c--cCceEE
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITK-----FDE----RYDVAFGINTLGAIHLVNFAKK-C--VKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~-----f~~----~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk~f 157 (570)
.|.++++- .-+... ..+. +|.++||++|... |.+ .++..+.+|+.++..+.+.... | ++-..+
T Consensus 106 ~Dft~~~~--~ye~i~-~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~I 182 (312)
T KOG1014|consen 106 IDFTKGDE--VYEKLL-EKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGII 182 (312)
T ss_pred EecCCCch--hHHHHH-HHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceE
Confidence 99998632 011122 2233 4779999999864 111 2345567899998887776532 2 133468
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||....-. . .....|..||+.
T Consensus 183 vnigS~ag~~p---------~-----------------------------------------------p~~s~ysasK~~ 206 (312)
T KOG1014|consen 183 VNIGSFAGLIP---------T-----------------------------------------------PLLSVYSASKAF 206 (312)
T ss_pred EEecccccccc---------C-----------------------------------------------hhHHHHHHHHHH
Confidence 88887653211 0 113578889986
Q ss_pred HHHHHH----Hh-cCCCcEEEEeccccccCCC
Q 008315 238 GEMIMQ----QS-KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 238 aE~~v~----~~-~~~lp~~IvRPsiV~g~~~ 264 (570)
-+.+-. ++ ..|+.+-.+-|..|.+...
T Consensus 207 v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 207 VDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 655433 33 5688899999988877543
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.9e-06 Score=78.45 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=68.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++|||||||+|. ++++|.+.|++| .++.|++.. .+.+. ...+. ..++.++.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V---~v~~R~~~~---~~~l~-------------~~l~~------~~~i~~~~~ 54 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHV---SVIARREVK---LENVK-------------RESTT------PESITPLPL 54 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEE---EEEECCHHH---HHHHH-------------HHhhc------CCcEEEEEc
Confidence 57999999999876 999999999754 566775321 11111 00110 246888999
Q ss_pred cCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCce----EEEEEe
Q 008315 93 DISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLK----VFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk----~fV~vS 161 (570)
|+++ ++....+++ .+|++|+. +.+.++.++.++|++. +++ +|+|+=
T Consensus 55 Dv~d-------~~sv~~~i~~~l~~~g~id~lv~~---------------vh~~~~~~~~~~~~~~-gv~~~~~~~~h~~ 111 (177)
T PRK08309 55 DYHD-------DDALKLAIKSTIEKNGPFDLAVAW---------------IHSSAKDALSVVCREL-DGSSETYRLFHVL 111 (177)
T ss_pred cCCC-------HHHHHHHHHHHHHHcCCCeEEEEe---------------ccccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence 9995 333334443 35566643 3445788999999998 888 899986
Q ss_pred ccc
Q 008315 162 TAY 164 (570)
Q Consensus 162 Ta~ 164 (570)
...
T Consensus 112 gs~ 114 (177)
T PRK08309 112 GSA 114 (177)
T ss_pred CCc
Confidence 433
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.6e-06 Score=83.56 Aligned_cols=84 Identities=14% Similarity=0.233 Sum_probs=53.0
Q ss_pred cCCCEEEEECCc----------------cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 008315 10 LENKIILVSGVT----------------GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGaT----------------GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++||+||||+|. ||+|.+|++.|+++|++| +++.+.......
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V---~li~g~~~~~~~------------------- 58 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHV---IYLHGYFAEKPN------------------- 58 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeE---EEEeCCCcCCCc-------------------
Confidence 479999999875 999999999999999866 444443211100
Q ss_pred hhcccccccccCceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCccc
Q 008315 74 KWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFDE 128 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~~ 128 (570)
.... ..++..+.+|.. ..+....+++ ++|+|||+||...|..
T Consensus 59 ----~~~~--~~~~~~V~s~~d-------~~~~l~~~~~~~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 59 ----DINN--QLELHPFEGIID-------LQDKMKSIITHEKVDAVIMAAAGSDWVV 102 (229)
T ss_pred ----ccCC--ceeEEEEecHHH-------HHHHHHHHhcccCCCEEEECccccceec
Confidence 0000 123445666332 1122345553 6899999999987753
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=4.9e-05 Score=71.15 Aligned_cols=126 Identities=12% Similarity=0.139 Sum_probs=74.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++++.++||||+|.||..++..|.+.|. +|++..|+... .+...+++ ++ . ..+..+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~---~V~l~~r~~~~---~~~~~~~l---------~~-~--------~~~~~~ 69 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA---KVIVTDIDQES---GQATVEEI---------TN-L--------GGEALF 69 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh-c--------CCcEEE
Confidence 6899999999999999999999999885 45677765321 11111111 11 1 134677
Q ss_pred EEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCc----cc-CHHHHHHHHHHHHHHHHHHHHHc------
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKF----DE-RYDVAFGINTLGAIHLVNFAKKC------ 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f----~~-~~~~~~~~Nv~gt~~ll~~a~~~------ 151 (570)
+.+|++++ ++ .+.+ +..+|++||+||.... .+ ....--.+|+.++......+...
T Consensus 70 ~~~Dl~~~------~~-v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (169)
T PRK06720 70 VSYDMEKQ------GD-WQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQE 142 (169)
T ss_pred EEccCCCH------HH-HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCC
Confidence 89999852 22 2232 2369999999997542 22 21122244555544333333221
Q ss_pred ----cCceEEEEEeccccc
Q 008315 152 ----VKLKVFVHVSTAYVA 166 (570)
Q Consensus 152 ----~~lk~fV~vSTa~v~ 166 (570)
....+|..|||....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 143 EVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred EEEeecCceeeEecccccc
Confidence 134578888876553
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.6e-05 Score=79.27 Aligned_cols=125 Identities=16% Similarity=0.097 Sum_probs=86.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+.++|.||||+|.||+.++..|..++ ....+.++.+.+....+. .+. . . ... .
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~-~~~elvL~Di~~~~g~a~-Dl~----~-----------------~-~~~--~ 59 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNP-HVSELSLYDIVGAPGVAA-DLS----H-----------------I-DTP--A 59 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCC-CCCEEEEEecCCCccccc-chh----h-----------------c-CcC--c
Confidence 466799999999999999999887544 335677777732111111 111 0 0 011 1
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
...+.+++ .+. .+.++++|+||++||..+- .++..+.+..|+.+++++++.+++. +++++|.++|..+...
T Consensus 60 ~v~~~td~------~~~-~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~ 131 (321)
T PTZ00325 60 KVTGYADG------ELW-EKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNST 131 (321)
T ss_pred eEEEecCC------Cch-HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHH
Confidence 22333321 232 2667899999999998653 3567788999999999999999998 8999999999877653
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.6e-05 Score=79.33 Aligned_cols=121 Identities=18% Similarity=0.110 Sum_probs=82.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.||||+|.||..++..|...+ -...+.++.+.+...... +|... .... ..
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~-~~~el~L~Di~~~~g~a~-----Dl~~~------------------~~~~--~i 71 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNP-LVSELHLYDIANTPGVAA-----DVSHI------------------NTPA--QV 71 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-CCCEEEEEecCCCCeeEc-----hhhhC------------------CcCc--eE
Confidence 4799999999999999999887643 345677777655111110 11110 0111 11
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
.+++. +.++ ...++++|+|||+||..+- .....+.+..|+..++++.+.+++. +.+++|.++|-=+.
T Consensus 72 ~~~~~------~~d~-~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD 139 (323)
T PLN00106 72 RGFLG------DDQL-GDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVN 139 (323)
T ss_pred EEEeC------CCCH-HHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 22221 2333 3677999999999998654 4567888999999999999999998 78899998875554
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.03 E-value=7.3e-05 Score=77.45 Aligned_cols=109 Identities=16% Similarity=0.111 Sum_probs=69.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCC----CccEEEEEEecCCcccHH-HHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQP----NVKKLYLLIRAADTESAA-LRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~----~V~~i~~lvR~~~~~~~~-~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+|+||||+|++|.+++..|+..+- .-..|.++.|.+...... +.+ ++. +-.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~--Dl~---------------------d~~ 59 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM--ELQ---------------------DCA 59 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee--ehh---------------------hcc
Confidence 4799999999999999999987541 112678888854321000 000 000 000
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+..+|+.. ..+. .+.++++|+|||+||..+. .+...+.++.|+.-.+.+.+..++.
T Consensus 60 ~~~~~~~~~------~~~~-~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 60 FPLLKSVVA------TTDP-EEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred ccccCCcee------cCCH-HHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 011223321 1222 3566899999999998754 3455778999999999998877776
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=76.55 Aligned_cols=163 Identities=18% Similarity=0.197 Sum_probs=104.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++.+||||++-.||.-++.-+++.+.+.. +++..|+... .+.+...
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~-r~g~~r~~a~--------------------------------~~~L~v~ 51 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEAL-RYGVARLLAE--------------------------------LEGLKVA 51 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHH-HHhhhccccc--------------------------------ccceEEE
Confidence 467899999999999999988888765431 1121221111 2344444
Q ss_pred EccCCCCCCCCC-hhhhHHHHhC-------CccEEEEcCccCC-----c-----ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 91 AGDISSEDLGLK-DSNLKEELWN-------ELDVMVNSAAITK-----F-----DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 91 ~gDl~~~~lgls-~~~~~~~l~~-------~vdiVih~Aa~v~-----f-----~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
.||.....-|.- .+..+..+.+ +-++|||.||... + .+.|+..+++|+.+...+...+...
T Consensus 52 ~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~l 131 (253)
T KOG1204|consen 52 YGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKL 131 (253)
T ss_pred ecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHh
Confidence 444432222111 2222222222 4799999999863 2 1347888999999999888877543
Q ss_pred cCc---eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 VKL---KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 ~~l---k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
++. +-+|.|||..+.-.-. ..
T Consensus 132 k~~p~~~~vVnvSS~aav~p~~--------------------------------------------------------~w 155 (253)
T KOG1204|consen 132 KKSPVNGNVVNVSSLAAVRPFS--------------------------------------------------------SW 155 (253)
T ss_pred cCCCccCeEEEecchhhhcccc--------------------------------------------------------HH
Confidence 332 6789999987653211 13
Q ss_pred chHHHHHHHHHHHHHHh---c-CCCcEEEEeccccccC
Q 008315 229 NTYVFTKTMGEMIMQQS---K-ENLSLVIIRPTIVSGT 262 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~---~-~~lp~~IvRPsiV~g~ 262 (570)
..|+.+|+.-+++++.. . .++.+..++||.|=..
T Consensus 156 a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~ 193 (253)
T KOG1204|consen 156 AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ 193 (253)
T ss_pred HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence 57999999999988754 3 3778899999988543
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.7e-05 Score=78.67 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=33.0
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.+++++|+||||||+||+.++++|++. ..+.+++++.|+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~-~gv~~lilv~R~ 190 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAK-TGVAELLLVARQ 190 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhh-CCCCEEEEEcCC
Confidence 578999999999999999999999864 235678888775
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.5e-05 Score=72.73 Aligned_cols=95 Identities=17% Similarity=0.178 Sum_probs=54.3
Q ss_pred CCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCCCCC
Q 008315 19 GVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSED 98 (570)
Q Consensus 19 GaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~~~ 98 (570)
.+|||+|.+|++.|+++|++| .++.|+..... ....++.++..+-.+.
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V---~li~r~~~~~~----------------------------~~~~~v~~i~v~s~~~- 70 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEV---TLVTTKTAVKP----------------------------EPHPNLSIIEIENVDD- 70 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEE---EEEECcccccC----------------------------CCCCCeEEEEEecHHH-
Confidence 368999999999999999755 56666431100 0013455555432210
Q ss_pred CCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHH
Q 008315 99 LGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 99 lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
..+.....++++|+|||+||...|.. ....-..+...+.++.+++++
T Consensus 71 ----m~~~l~~~~~~~DivIh~AAvsd~~~-~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 71 ----LLETLEPLVKDHDVLIHSMAVSDYTP-VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred ----HHHHHHHHhcCCCEEEeCCccCCcee-hhhhhhhhhhhhhhhhhhhcc
Confidence 01222345678999999999876543 222223344455555555543
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00086 Score=69.12 Aligned_cols=118 Identities=17% Similarity=0.122 Sum_probs=76.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.||||.+|++++..|.........+.++.|++. .... .+ ++. + .+....+.|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~-al--Dl~-----------------~--~~~~~~i~~ 57 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGV-AV--DLS-----------------H--IPTAVKIKG 57 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Ccce-eh--hhh-----------------c--CCCCceEEE
Confidence 58999999999999999888653333345666666532 1110 00 010 0 011112333
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
.. ..+.. ..++++|+||.+||..+- .+...+.+..|....+++++..++. +.+++|.++|=
T Consensus 58 -~~-------~~d~~-~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvsN 119 (312)
T PRK05086 58 -FS-------GEDPT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIITN 119 (312)
T ss_pred -eC-------CCCHH-HHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccC
Confidence 11 12322 455789999999998643 3445667899999999999999987 78888887763
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0026 Score=66.52 Aligned_cols=85 Identities=15% Similarity=0.135 Sum_probs=52.7
Q ss_pred CCCEEEEECCccHhHHH--HHHHHHHhCCCccEEEEEEecCCccc---------HHHHHHHHHhhhhhHHHHHhhhcccc
Q 008315 11 ENKIILVSGVTGFVAKV--FIEKILRVQPNVKKLYLLIRAADTES---------AALRFQNEVLAKDLFNVLKEKWGTRL 79 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~--Lve~Ll~~g~~V~~i~~lvR~~~~~~---------~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
.+|++|||||++-+|.+ +++.| +.|..| +++.+.+.... ..+.+. .+-++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~V---i~v~~~~~~~~~~~~tagwy~~~a~~----------~~a~~~---- 101 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADT---LGVFFEKPGTEKKTGTAGWYNSAAFD----------KFAKAA---- 101 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeE---EEEecCcchhhhcccccccchHHHHH----------HHHHhc----
Confidence 46999999999999999 88999 888643 45554321110 111121 111111
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccC
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAIT 124 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v 124 (570)
..++..+.+|++++ ++ .+.++ .++|+++|++|..
T Consensus 102 ----G~~a~~i~~DVss~------E~-v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 102 ----GLYAKSINGDAFSD------EI-KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred ----CCceEEEEcCCCCH------HH-HHHHHHHHHHhcCCCCEEEECCccC
Confidence 13456789999963 22 22332 3699999999986
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.001 Score=64.43 Aligned_cols=137 Identities=18% Similarity=0.208 Sum_probs=85.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCC--ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPN--VKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~--V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.|.++|||++..+|-+|+.+|++...+ +-++.+..|+-..... +-.+|++-+|.. ..++++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~------------vc~~lk~f~p~~-----~i~~~y 65 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEA------------VCAALKAFHPKS-----TIEVTY 65 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHH------------HHHHHHHhCCCc-----eeEEEE
Confidence 478999999999999999999987644 2344455565433221 122444555521 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc----------------------------------ccCHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF----------------------------------DERYDVAFG 135 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f----------------------------------~~~~~~~~~ 135 (570)
+..|+++-..-+.+......-++..|.|+-.||...+ .+.+.+.++
T Consensus 66 vlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFe 145 (341)
T KOG1478|consen 66 VLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFE 145 (341)
T ss_pred EEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhh
Confidence 9999985211111111111223468999999987543 244667789
Q ss_pred HHHHHHHHHHHHHHHc---cCceEEEEEecccc
Q 008315 136 INTLGAIHLVNFAKKC---VKLKVFVHVSTAYV 165 (570)
Q Consensus 136 ~Nv~gt~~ll~~a~~~---~~lk~fV~vSTa~v 165 (570)
+||.|...+++..... ..-..+|.+||..+
T Consensus 146 tnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a 178 (341)
T KOG1478|consen 146 TNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMA 178 (341)
T ss_pred hcccchhhhHhhhhhHhhcCCCCeEEEEeeccc
Confidence 9999988877654432 12237899998765
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00014 Score=66.22 Aligned_cols=124 Identities=23% Similarity=0.355 Sum_probs=84.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD-TESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~-~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-+|-..+||||...+|++-.|.|...|..| .++.-+.+ +...... +-.++.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv---~lldlp~skg~~vake-------------------------lg~~~v 58 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASV---ALLDLPQSKGADVAKE-------------------------LGGKVV 58 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceE---EEEeCCcccchHHHHH-------------------------hCCceE
Confidence 467889999999999999999999999654 45544433 2222211 137899
Q ss_pred EEEccCCCCCCCCChhhhHHHH------hCCccEEEEcCccCC------cc-------cCHHHHHHHHHHHHHHHHHHHH
Q 008315 89 FVAGDISSEDLGLKDSNLKEEL------WNELDVMVNSAAITK------FD-------ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l------~~~vdiVih~Aa~v~------f~-------~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
+...|+++ ++|....+ +..+|..+|||++.- ++ |..+..+++|+.||.+++++..
T Consensus 59 f~padvts------ekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~a 132 (260)
T KOG1199|consen 59 FTPADVTS------EKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGA 132 (260)
T ss_pred EeccccCc------HHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehh
Confidence 99999995 34433222 235899999999741 11 3455567899999999998764
Q ss_pred H-cc------CceEEEEEecccccC
Q 008315 150 K-CV------KLKVFVHVSTAYVAG 167 (570)
Q Consensus 150 ~-~~------~lk~fV~vSTa~v~~ 167 (570)
. |. +-+|=|.+.|+.|..
T Consensus 133 glmg~nepdq~gqrgviintasvaa 157 (260)
T KOG1199|consen 133 GLMGENEPDQNGQRGVIINTASVAA 157 (260)
T ss_pred hhhcCCCCCCCCcceEEEeeceeee
Confidence 3 21 235666677776654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00065 Score=71.23 Aligned_cols=90 Identities=21% Similarity=0.255 Sum_probs=68.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|.|| |++|+.++.+|.+++. ..|++..|++.... ++. .. ..+++++++.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d--~~V~iAdRs~~~~~---~i~-------------~~--------~~~~v~~~~v 54 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD--GEVTIADRSKEKCA---RIA-------------EL--------IGGKVEALQV 54 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC--ceEEEEeCCHHHHH---HHH-------------hh--------ccccceeEEe
Confidence 68999998 9999999999999874 67899999865432 221 11 1258999999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
|+.+ .+.+.+++++.|+|||++.... +..++++|.+.
T Consensus 55 D~~d-------~~al~~li~~~d~VIn~~p~~~---------------~~~i~ka~i~~ 91 (389)
T COG1748 55 DAAD-------VDALVALIKDFDLVINAAPPFV---------------DLTILKACIKT 91 (389)
T ss_pred cccC-------hHHHHHHHhcCCEEEEeCCchh---------------hHHHHHHHHHh
Confidence 9994 4445688899999999988621 12578888887
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0047 Score=63.95 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=67.9
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCcc-----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~-----~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+|.||||+|.+|+.++..|+..+- +. .++++.+.+.. ++.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~-~~~~~~~~l~L~Di~~~~---------------------------------~~~~ 47 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGEL-FGDDQPVILHLLDIPPAM---------------------------------KALE 47 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCc-cCCCCceEEEEEecCCcc---------------------------------Cccc
Confidence 699999999999999998886542 23 36676665421 1122
Q ss_pred EEEccCCCCCCCC-C----hhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 89 FVAGDISSEDLGL-K----DSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgl-s----~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
....|+.+....+ + ..+. .+.++++|+|||+||..+- .+...+.+..|+.-.+++....++.
T Consensus 48 g~~~Dl~d~~~~~~~~~~i~~~~-~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 48 GVVMELQDCAFPLLKGVVITTDP-EEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred eeeeehhhhcccccCCcEEecCh-HHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 3333443321000 0 0121 3667899999999998643 3456677899999999999888876
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0033 Score=65.04 Aligned_cols=177 Identities=14% Similarity=0.027 Sum_probs=102.7
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQP----NVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~----~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|.|+||+|++|..++..|+..+- ....++++.+.+....+..... ++.... . . ...++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~-Dl~~~~--------~-----~-~~~~~ 66 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAM-ELEDCA--------F-----P-LLAEI 66 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeeh-hhhhcc--------c-----c-ccCce
Confidence 46899999999999999999986542 2226777776432210000000 111110 0 0 01122
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
.+. + .+ ...++++|+||-+||..+- .+...+.+..|+.-.+.+.+..++......++.+-| |
T Consensus 67 ~i~-~-----------~~--~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs---N 129 (322)
T cd01338 67 VIT-D-----------DP--NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVG---N 129 (322)
T ss_pred EEe-c-----------Cc--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec---C
Confidence 221 1 11 1455899999999998543 345566789999999999998887621233333322 1
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcc-ccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG-TERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
|+|.-.. .+ .+..| + ++...|+.|+...+++....
T Consensus 130 ----------------PvD~~t~--~~--------------------~k~sg~~------p~~~ViG~t~LDs~Rl~~~l 165 (322)
T cd01338 130 ----------------PCNTNAL--IA--------------------MKNAPDI------PPDNFTAMTRLDHNRAKSQL 165 (322)
T ss_pred ----------------cHHHHHH--HH--------------------HHHcCCC------ChHheEEehHHHHHHHHHHH
Confidence 1211000 00 00010 1 23457888999888887665
Q ss_pred --cCCCcEEEEeccccccCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~ 264 (570)
..+++...+|..+|+|+..
T Consensus 166 a~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 166 AKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HHHhCcChhHeEEEEEEeCCc
Confidence 4578889999989888764
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0043 Score=64.22 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=68.5
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCcc-----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~-----~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+|.|+||+|.+|..++..|...+- +. .++++.+.+.. ++.+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~-~~~~~e~el~LiD~~~~~---------------------------------~~a~ 46 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRM-LGKDQPIILHLLDIPPAM---------------------------------KVLE 46 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccc-cCCCCccEEEEEecCCcc---------------------------------cccc
Confidence 589999999999999999886442 11 46666664332 1123
Q ss_pred EEEccCCCCCCCC----C-hhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 89 FVAGDISSEDLGL----K-DSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgl----s-~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
....|+.+....+ . ..+. ...++++|+|||+||..+- .+...+.+..|+.-.+.+.+..++.
T Consensus 47 g~~~Dl~d~~~~~~~~~~~~~~~-~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 47 GVVMELMDCAFPLLDGVVPTHDP-AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred eeEeehhcccchhcCceeccCCh-HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334444322000 0 0121 2566899999999998654 3456778999999999999988886
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0014 Score=69.70 Aligned_cols=77 Identities=16% Similarity=0.262 Sum_probs=52.8
Q ss_pred cCCCEEEEECC----------------ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 008315 10 LENKIILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++||+|+|||| ||.+|.++++.|.+.|.+| +++.|+....
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V---~~v~~~~~~~--------------------- 241 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADV---TLVSGPVNLP--------------------- 241 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEE---EEeCCCcccc---------------------
Confidence 68999999999 9999999999999999655 5665543110
Q ss_pred hhcccccccccCceEEEEccCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCcc
Q 008315 74 KWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKFD 127 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f~ 127 (570)
. ...+ ...|+++ .++..+.+ +.++|++||+||...|.
T Consensus 242 -~--------~~~~--~~~dv~~------~~~~~~~v~~~~~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 242 -T--------PAGV--KRIDVES------AQEMLDAVLAALPQADIFIMAAAVADYR 281 (399)
T ss_pred -C--------CCCc--EEEccCC------HHHHHHHHHHhcCCCCEEEEcccccccc
Confidence 0 0112 2456664 33433222 34699999999987664
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0029 Score=60.49 Aligned_cols=83 Identities=22% Similarity=0.197 Sum_probs=53.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++++|+||||.+|+.+++.|.+.|. +|+++.|+... .+.+. +.+.+. .+...
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~---~V~l~~R~~~~---~~~l~---------~~l~~~----------~~~~~ 80 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA---RVVLVGRDLER---AQKAA---------DSLRAR----------FGEGV 80 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH---------HHHHhh----------cCCcE
Confidence 4789999999999999999999998774 56777776311 11111 111111 12234
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v 124 (570)
...|..+ .++ ....++++|+||++.+..
T Consensus 81 ~~~~~~~------~~~-~~~~~~~~diVi~at~~g 108 (194)
T cd01078 81 GAVETSD------DAA-RAAAIKGADVVFAAGAAG 108 (194)
T ss_pred EEeeCCC------HHH-HHHHHhcCCEEEECCCCC
Confidence 4556652 333 346778999999977653
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0012 Score=58.23 Aligned_cols=40 Identities=15% Similarity=0.380 Sum_probs=33.7
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-CcccH
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-DTESA 54 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-~~~~~ 54 (570)
+|.|.||||++|+.|++.|++ .|.+..+.+..|+. .++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~ 41 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPL 41 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBH
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCee
Confidence 689999999999999998888 78888888888877 55544
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.025 Score=51.19 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=73.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|++++-.|+.. .-+..++++.+.+....... . ++.....+ ...++....+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~-~l~~ei~L~D~~~~~~~g~a--~-Dl~~~~~~--------------~~~~~~i~~~ 62 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQ-GLADEIVLIDINEDKAEGEA--L-DLSHASAP--------------LPSPVRITSG 62 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHT-TTSSEEEEEESSHHHHHHHH--H-HHHHHHHG--------------STEEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhC-CCCCceEEeccCcccceeee--h-hhhhhhhh--------------cccccccccc
Confidence 48999999999999999999886 45577888887654221111 1 22222111 0122333332
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
|. +.++++|+|+-+|+..+- .+...+.+..|+.-.+++.+...+. +.+.++
T Consensus 63 ~~--------------~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~-~p~~~v 114 (141)
T PF00056_consen 63 DY--------------EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY-APDAIV 114 (141)
T ss_dssp SG--------------GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH-STTSEE
T ss_pred cc--------------cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh-CCccEE
Confidence 21 334799999999997543 3556677899999999999988886 334333
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0057 Score=62.42 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=54.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+++|||| |.+|++++..|.+.|. ++|+++.|+.......+.+.++ +.+. ..++..
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~--~~V~I~~R~~~~~~~a~~l~~~---------l~~~---------~~~~~~ 182 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTAEK---------IKQE---------VPECIV 182 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCchHHHHHHHHHHH---------Hhhc---------CCCcee
Confidence 46899999998 8999999999998874 5688999975321222222211 1111 123444
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCcc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~ 123 (570)
...|+++ .+..+..++++|+|||+-..
T Consensus 183 ~~~d~~~-------~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 183 NVYDLND-------TEKLKAEIASSDILVNATLV 209 (289)
T ss_pred EEechhh-------hhHHHhhhccCCEEEEeCCC
Confidence 5567663 32234566788999997654
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0089 Score=59.68 Aligned_cols=94 Identities=12% Similarity=0.217 Sum_probs=60.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||+||||. |+.|++.|.+.|+ +|++.+|+..+...... .....++.|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~---~v~~s~~t~~~~~~~~~--------------------------~g~~~v~~g 50 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGI---EILVTVTTSEGKHLYPI--------------------------HQALTVHTG 50 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCC---eEEEEEccCCccccccc--------------------------cCCceEEEC
Confidence 58999999999 9999999999885 45788887755422110 012233444
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
-+. .++.. .+++ ++++||+++.+ | . ...+.++.++|+++ ++.-+
T Consensus 51 ~l~-------~~~l~-~~l~~~~i~~VIDAtHP--f----A------~~is~~a~~a~~~~-~ipyl 96 (256)
T TIGR00715 51 ALD-------PQELR-EFLKRHSIDILVDATHP--F----A------AQITTNATAVCKEL-GIPYV 96 (256)
T ss_pred CCC-------HHHHH-HHHHhcCCCEEEEcCCH--H----H------HHHHHHHHHHHHHh-CCcEE
Confidence 443 44443 4443 59999998765 2 1 13466788889988 66533
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0055 Score=62.34 Aligned_cols=89 Identities=24% Similarity=0.388 Sum_probs=58.9
Q ss_pred EEEEECCccHhHHHHHHHHHHhC--CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQ--PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g--~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
-+.|-|||||-|+.++|.+++++ .+ ..+-+..|+.+ ++++ . ...+-+..+.+ +...+ ++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~-~slavAGRn~~------KL~~-v-----L~~~~~k~~~~----ls~~~-i~i 68 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEG-LSLAVAGRNEK------KLQE-V-----LEKVGEKTGTD----LSSSV-ILI 68 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccC-ceEEEecCCHH------HHHH-H-----HHHHhhccCCC----cccce-EEE
Confidence 58999999999999999999833 22 23445556542 2221 1 11112222221 12344 888
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD 127 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~ 127 (570)
+|.. +++.+.++++.+.+|+||+|+.+|.
T Consensus 69 ~D~~-------n~~Sl~emak~~~vivN~vGPyR~h 97 (423)
T KOG2733|consen 69 ADSA-------NEASLDEMAKQARVIVNCVGPYRFH 97 (423)
T ss_pred ecCC-------CHHHHHHHHhhhEEEEeccccceec
Confidence 9998 5566679999999999999998875
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0061 Score=57.76 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=46.6
Q ss_pred cCCCEEEEECC----------------ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 008315 10 LENKIILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++||+||||+| ||-+|.+|++.++++|.+| .++..+. ....
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V---~li~g~~-~~~~------------------- 57 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEV---TLIHGPS-SLPP------------------- 57 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EE---EEEE-TT-S----------------------
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEE---EEEecCc-cccc-------------------
Confidence 47899999974 7999999999999999766 3444432 1100
Q ss_pred hhcccccccccCceEEEEccCCCCCCCCChhhhHH---HHhCCccEEEEcCccCCccc
Q 008315 74 KWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKE---ELWNELDVMVNSAAITKFDE 128 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~---~l~~~vdiVih~Aa~v~f~~ 128 (570)
...+..+...-. ++..+ ..+++.|++||+||...|..
T Consensus 58 ----------p~~~~~i~v~sa--------~em~~~~~~~~~~~Di~I~aAAVsDf~p 97 (185)
T PF04127_consen 58 ----------PPGVKVIRVESA--------EEMLEAVKELLPSADIIIMAAAVSDFRP 97 (185)
T ss_dssp -----------TTEEEEE-SSH--------HHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred ----------cccceEEEecch--------hhhhhhhccccCcceeEEEecchhheee
Confidence 145666665433 33332 34467899999999988864
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0034 Score=66.78 Aligned_cols=90 Identities=23% Similarity=0.338 Sum_probs=59.7
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|.|| |++|+.+++.|+++++ +.+|.+..|+.... +++. ++ ....++..+..|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~-~~~v~va~r~~~~~---~~~~-------------~~-------~~~~~~~~~~~d~ 55 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP-FEEVTVADRNPEKA---ERLA-------------EK-------LLGDRVEAVQVDV 55 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC-E-EEEEEESSHHHH---HHHH-------------T---------TTTTEEEEE--T
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC-CCcEEEEECCHHHH---HHHH-------------hh-------ccccceeEEEEec
Confidence 789999 9999999999998753 34788888875322 1111 00 0136899999999
Q ss_pred CCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 95 SSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+ .+.+..++++.|+||||++.. + ...++++|.+.
T Consensus 56 ~~-------~~~l~~~~~~~dvVin~~gp~-~--------------~~~v~~~~i~~ 90 (386)
T PF03435_consen 56 ND-------PESLAELLRGCDVVINCAGPF-F--------------GEPVARACIEA 90 (386)
T ss_dssp TT-------HHHHHHHHTTSSEEEE-SSGG-G--------------HHHHHHHHHHH
T ss_pred CC-------HHHHHHHHhcCCEEEECCccc-h--------------hHHHHHHHHHh
Confidence 94 443568899999999999974 1 12477888887
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.01 Score=68.21 Aligned_cols=166 Identities=16% Similarity=0.207 Sum_probs=113.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..|+.+|+||-|..|-.|+..|..+|. +++.+..|+.-..-.+.+. -.+||+. .-+|.+-
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGa--r~lVLtSRsGirtGYQa~~---------vrrWr~~---------GVqV~vs 1826 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGA--RKLVLTSRSGIRTGYQALM---------VRRWRRR---------GVQVQVS 1826 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCc--eEEEEeccccchhhHHHHH---------HHHHHhc---------CeEEEEe
Confidence 358999999999999999999999985 6777778876444333332 1234432 1234445
Q ss_pred EccCCCCCCCCChhhhHHHHhCC------ccEEEEcCccCCc----c---cCHHHHHHHHHHHHHHHHHHHHH-ccCceE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNE------LDVMVNSAAITKF----D---ERYDVAFGINTLGAIHLVNFAKK-CVKLKV 156 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~------vdiVih~Aa~v~f----~---~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk~ 156 (570)
..|++. .+.. ..++++ |--|||+|+..+- + ++.++.-+.-+.||.++=+..++ |+.++-
T Consensus 1827 T~nitt------~~ga-~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~Ldy 1899 (2376)
T KOG1202|consen 1827 TSNITT------AEGA-RGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDY 1899 (2376)
T ss_pred cccchh------hhhH-HHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccce
Confidence 567774 3332 355543 6789999998753 1 23455556678889888777766 578899
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
||..||..+--... -.+.|+.+..
T Consensus 1900 Fv~FSSvscGRGN~--------------------------------------------------------GQtNYG~aNS 1923 (2376)
T KOG1202|consen 1900 FVVFSSVSCGRGNA--------------------------------------------------------GQTNYGLANS 1923 (2376)
T ss_pred EEEEEeecccCCCC--------------------------------------------------------cccccchhhH
Confidence 99999987632211 1456999999
Q ss_pred HHHHHHHHh-cCCCcEEEEecccc
Q 008315 237 MGEMIMQQS-KENLSLVIIRPTIV 259 (570)
Q Consensus 237 ~aE~~v~~~-~~~lp~~IvRPsiV 259 (570)
..|+++.+. ..|+|-+.|.=+.|
T Consensus 1924 ~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1924 AMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred HHHHHHHHhhhcCCCcceeeeecc
Confidence 999999876 56788666665544
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.029 Score=53.89 Aligned_cols=131 Identities=15% Similarity=0.198 Sum_probs=79.0
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H---HHHh---hhhhHHHHHhhhc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---Q---NEVL---AKDLFNVLKEKWG 76 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~---~~l~---~~~~f~~l~~~~~ 76 (570)
.++-+++.+|+|.|++| +|..+++.|.+.| |++|.++....-..+-..|. . +++- ...+-++|++-.|
T Consensus 13 ~q~~L~~s~VlviG~gg-lGsevak~L~~~G--Vg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp 89 (198)
T cd01485 13 AQNKLRSAKVLIIGAGA-LGAEIAKNLVLAG--IDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP 89 (198)
T ss_pred HHHHHhhCcEEEECCCH-HHHHHHHHHHHcC--CCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC
Confidence 35556789999999777 9999999999976 67888876654332211110 0 0111 1122345665554
Q ss_pred ccccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 77 TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
.-+++.+..++.+. .++ .+..+++.|+||-+... ..... .+-++|++. + ..
T Consensus 90 -------~v~i~~~~~~~~~~-----~~~-~~~~~~~~dvVi~~~d~------~~~~~--------~ln~~c~~~-~-ip 140 (198)
T cd01485 90 -------NVKLSIVEEDSLSN-----DSN-IEEYLQKFTLVIATEEN------YERTA--------KVNDVCRKH-H-IP 140 (198)
T ss_pred -------CCEEEEEecccccc-----hhh-HHHHHhCCCEEEECCCC------HHHHH--------HHHHHHHHc-C-CC
Confidence 24567776666521 122 24667899999966332 22222 244678776 4 47
Q ss_pred EEEEecccccCC
Q 008315 157 FVHVSTAYVAGE 168 (570)
Q Consensus 157 fV~vSTa~v~~~ 168 (570)
||+.++...+|.
T Consensus 141 ~i~~~~~G~~G~ 152 (198)
T cd01485 141 FISCATYGLIGY 152 (198)
T ss_pred EEEEEeecCEEE
Confidence 899888777654
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.2 Score=48.47 Aligned_cols=111 Identities=23% Similarity=0.323 Sum_probs=66.7
Q ss_pred hcCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||++||+|-. --|+-.+++.|.+.|.++.-.| .. ....+|++ ++ -++. ..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy---~~---e~l~krv~-~l---------a~~~---------~s 57 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTY---QG---ERLEKRVE-EL---------AEEL---------GS 57 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEe---cc---HHHHHHHH-HH---------Hhhc---------cC
Confidence 6799999999954 5689999999999997642221 11 12233333 11 1111 12
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK-------FD----ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a 148 (570)
-.++.+|+++ +++ .+.+++ +.|.++|+-|... |- +.+..+.++-...-..+.+.|
T Consensus 58 ~~v~~cDV~~------d~~-i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a 130 (259)
T COG0623 58 DLVLPCDVTN------DES-IDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAA 130 (259)
T ss_pred CeEEecCCCC------HHH-HHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHH
Confidence 3568899995 343 345443 5899999999764 21 223334455555555566666
Q ss_pred HHc
Q 008315 149 KKC 151 (570)
Q Consensus 149 ~~~ 151 (570)
+.+
T Consensus 131 ~~l 133 (259)
T COG0623 131 RPL 133 (259)
T ss_pred HHh
Confidence 553
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.011 Score=61.76 Aligned_cols=39 Identities=28% Similarity=0.294 Sum_probs=33.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
+++|+|.||||++|+.|++.|.++++.+..+..+.|...
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 368999999999999999999988877777888887643
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.054 Score=56.49 Aligned_cols=129 Identities=19% Similarity=0.210 Sum_probs=78.2
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---HH-HH----hh-hhhHHHHHhhhc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---QN-EV----LA-KDLFNVLKEKWG 76 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~~-~l----~~-~~~f~~l~~~~~ 76 (570)
-++-+++++|+|.|+ |-+|+.+++.|.+.| |.++.++.+..-..+-..|- .. ++ .+ ...-+++++-.|
T Consensus 18 ~Q~~L~~~~VlIiG~-GglGs~va~~La~aG--vg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp 94 (338)
T PRK12475 18 GQRKIREKHVLIVGA-GALGAANAEALVRAG--IGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS 94 (338)
T ss_pred HHHhhcCCcEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC
Confidence 356678899999995 669999999999987 56787777765222211110 00 00 00 011234444433
Q ss_pred ccccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 77 TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
.-+++.+..|++ .+.. +.+++++|+||.+... .+.-+ .+-++|.+. + ..
T Consensus 95 -------~v~i~~~~~~~~-------~~~~-~~~~~~~DlVid~~D~------~~~r~--------~in~~~~~~-~-ip 143 (338)
T PRK12475 95 -------EVEIVPVVTDVT-------VEEL-EELVKEVDLIIDATDN------FDTRL--------LINDLSQKY-N-IP 143 (338)
T ss_pred -------CcEEEEEeccCC-------HHHH-HHHhcCCCEEEEcCCC------HHHHH--------HHHHHHHHc-C-CC
Confidence 245777888877 4443 4778999999988642 22111 133566665 4 46
Q ss_pred EEEEecccccCC
Q 008315 157 FVHVSTAYVAGE 168 (570)
Q Consensus 157 fV~vSTa~v~~~ 168 (570)
+|+.+....+|.
T Consensus 144 ~i~~~~~g~~G~ 155 (338)
T PRK12475 144 WIYGGCVGSYGV 155 (338)
T ss_pred EEEEEecccEEE
Confidence 888887766653
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.047 Score=56.24 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=66.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||||.+|..++..|+..|. ...|.++.|.++......... ++ .+.+... ..... +.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~-~~~v~lvd~~~~~~~l~~~~~-dl-----~d~~~~~---------~~~~~-i~~ 63 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDV-VKEINLISRPKSLEKLKGLRL-DI-----YDALAAA---------GIDAE-IKI 63 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEECcccccccccccc-hh-----hhchhcc---------CCCcE-EEE
Confidence 5899999999999999999998764 346788888432111100000 11 1100000 00111 111
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+ .+. ..+.++|+||-+|+..+- +++..+.++.|+.-.+.+++...+.
T Consensus 64 --~--------~d~--~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 64 --S--------SDL--SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred --C--------CCH--HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122 236899999999997543 3344566889999999998877665
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.085 Score=55.04 Aligned_cols=128 Identities=19% Similarity=0.217 Sum_probs=79.0
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHH----hh-hhhHHHHHhhhcc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEV----LA-KDLFNVLKEKWGT 77 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l----~~-~~~f~~l~~~~~~ 77 (570)
++-++.++|+|.|+ |.+|+.+++.|.+.| |.+|.++.+..-..+-..|- .+++ .+ ...-+++++-.|
T Consensus 19 Q~~L~~~~VlVvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp- 94 (339)
T PRK07688 19 QQKLREKHVLIIGA-GALGTANAEMLVRAG--VGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS- 94 (339)
T ss_pred HHHhcCCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-
Confidence 55678899999996 999999999999986 57787777754222211110 0011 00 011234444333
Q ss_pred cccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 78 RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
.-+++.+..+++ ..+. ..+++++|+||.+... +.. -..+-++|.+. + ..+
T Consensus 95 ------~v~v~~~~~~~~-------~~~~-~~~~~~~DlVid~~Dn------~~~--------r~~ln~~~~~~-~-iP~ 144 (339)
T PRK07688 95 ------DVRVEAIVQDVT-------AEEL-EELVTGVDLIIDATDN------FET--------RFIVNDAAQKY-G-IPW 144 (339)
T ss_pred ------CcEEEEEeccCC-------HHHH-HHHHcCCCEEEEcCCC------HHH--------HHHHHHHHHHh-C-CCE
Confidence 235677777877 4443 4678999999988442 221 12355677775 4 568
Q ss_pred EEEecccccCC
Q 008315 158 VHVSTAYVAGE 168 (570)
Q Consensus 158 V~vSTa~v~~~ 168 (570)
|+.|+...+|.
T Consensus 145 i~~~~~g~~G~ 155 (339)
T PRK07688 145 IYGACVGSYGL 155 (339)
T ss_pred EEEeeeeeeeE
Confidence 99888777664
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.017 Score=61.25 Aligned_cols=77 Identities=19% Similarity=0.346 Sum_probs=51.6
Q ss_pred cCCCEEEEECC----------------ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHh
Q 008315 10 LENKIILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKE 73 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~ 73 (570)
++|++|+|||| ||.+|.++++.|.+.|.+| +++.++.....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V---~~~~g~~~~~~-------------------- 239 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADV---TLITGPVSLLT-------------------- 239 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEE---EEeCCCCccCC--------------------
Confidence 67899999998 4789999999999999765 45454432110
Q ss_pred hhcccccccccCceEEEEccCCCCCCCCChhhhHHH----HhCCccEEEEcCccCCcc
Q 008315 74 KWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEE----LWNELDVMVNSAAITKFD 127 (570)
Q Consensus 74 ~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~----l~~~vdiVih~Aa~v~f~ 127 (570)
...+ ...|++. .++..+. +..++|++||+||...|.
T Consensus 240 ----------~~~~--~~~~v~~------~~~~~~~~~~~~~~~~D~~i~~Aavsd~~ 279 (390)
T TIGR00521 240 ----------PPGV--KSIKVST------AEEMLEAALNELAKDFDIFISAAAVADFK 279 (390)
T ss_pred ----------CCCc--EEEEecc------HHHHHHHHHHhhcccCCEEEEcccccccc
Confidence 1122 3456664 3333232 334689999999998764
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.12 Score=51.50 Aligned_cols=127 Identities=17% Similarity=0.102 Sum_probs=77.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.++.++....-..+-..|- .+++-+. ..-++|++-.|
T Consensus 27 Q~~L~~~~VliiG~-GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp--- 100 (245)
T PRK05690 27 QEKLKAARVLVVGL-GGLGCAASQYLAAAG--VGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP--- 100 (245)
T ss_pred HHHhcCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC---
Confidence 45568899999997 999999999999976 67888876654443333331 0011111 11244555444
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++.+...++ .++. ..+++++|+||.|... .+. -..+-++|.+. + +.+|+
T Consensus 101 ----~v~i~~~~~~i~-------~~~~-~~~~~~~DiVi~~~D~------~~~--------r~~ln~~~~~~-~-ip~v~ 152 (245)
T PRK05690 101 ----HIAIETINARLD-------DDEL-AALIAGHDLVLDCTDN------VAT--------RNQLNRACFAA-K-KPLVS 152 (245)
T ss_pred ----CCEEEEEeccCC-------HHHH-HHHHhcCCEEEecCCC------HHH--------HHHHHHHHHHh-C-CEEEE
Confidence 245666766665 3343 4677899999998653 111 12344667665 4 56887
Q ss_pred EecccccC
Q 008315 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 153 ~~~~g~~G 160 (245)
T PRK05690 153 GAAIRMEG 160 (245)
T ss_pred eeeccCCc
Confidence 66554443
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.029 Score=59.39 Aligned_cols=184 Identities=11% Similarity=0.110 Sum_probs=94.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD-TESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~-~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..++|.|.||||++|+.|++.|++. |.+ +|..+.+... ++...+ .....
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~-el~~l~s~~saG~~i~~----------------------------~~~~l 86 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PDF-EITVMTADRKAGQSFGS----------------------------VFPHL 86 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CCC-eEEEEEChhhcCCCchh----------------------------hCccc
Confidence 4469999999999999999988876 554 5667776422 211110 00111
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
..+|+.+. .+.+. ..++++|+||-+.+.- ...+++..+. . + .++|-.|+++-.-+.
T Consensus 87 ~~~~~~~~----~~~~~--~~~~~~DvVf~Alp~~---------------~s~~i~~~~~-~-g-~~VIDlSs~fRl~~~ 142 (381)
T PLN02968 87 ITQDLPNL----VAVKD--ADFSDVDAVFCCLPHG---------------TTQEIIKALP-K-D-LKIVDLSADFRLRDI 142 (381)
T ss_pred cCccccce----ecCCH--HHhcCCCEEEEcCCHH---------------HHHHHHHHHh-C-C-CEEEEcCchhccCCc
Confidence 22333210 01121 2237899999876541 3444555542 2 3 679999999987553
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
...|+.|... ...|+-..+.+. ++.|-. ... +....+-.-|+.|+.+=.++=.=+.+. ..+
T Consensus 143 --~~y~~~y~~p-~~~pe~~~~~~y---------glpE~~-r~~-----i~~~~iIAnPgC~~t~~~laL~PL~~~-~~i 203 (381)
T PLN02968 143 --AEYEEWYGHP-HRAPELQKEAVY---------GLTELQ-REE-----IKSARLVANPGCYPTGIQLPLVPLVKA-GLI 203 (381)
T ss_pred --ccchhccCCC-CCCcccchhhhc---------ccchhC-HHH-----hcCCCEEECCCCHHHHHHHHHHHHHHc-CCC
Confidence 2344554321 111111100000 000000 000 011122346899999888777766552 122
Q ss_pred ---cEEEEeccccccCCCCCC
Q 008315 250 ---SLVIIRPTIVSGTYKEPF 267 (570)
Q Consensus 250 ---p~~IvRPsiV~g~~~~p~ 267 (570)
++++-=-+.+.|.++.+.
T Consensus 204 ~~~~iiv~a~sgvSGAG~~~~ 224 (381)
T PLN02968 204 EPDNIIIDAKSGVSGAGRGAK 224 (381)
T ss_pred CCceEEEEEeeeccccCcccc
Confidence 255555566677666443
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.34 Score=50.07 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=73.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|.|+|| |.+|..++-.|+..+ -+..++++.+.+........ ++.... .+ ..++...
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~-~~~el~L~D~~~~~~~g~~~---Dl~~~~--------------~~-~~~~~i~ 64 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQG-IADELVIIDINKEKAEGDAM---DLSHAV--------------PF-TSPTKIY 64 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCCchhHHHHH---HHHhhc--------------cc-cCCeEEE
Confidence 5689999998 999999999888765 34578888886544322211 222111 01 1233333
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.+| . +.++++|+||-+|+..+- .....+.+..|..-.+.+++..++. +.+.++
T Consensus 65 ~~~------------~--~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~-~~~~~v 118 (315)
T PRK00066 65 AGD------------Y--SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS-GFDGIF 118 (315)
T ss_pred eCC------------H--HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 222 1 235899999999997543 3455677899999999988888775 334433
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.13 Score=49.56 Aligned_cols=129 Identities=15% Similarity=0.119 Sum_probs=77.7
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhh---hhhHHHHHhhhccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVLA---KDLFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~~---~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.| .|-+|+.+++.|.+.| |.++.++.+..-..+-..|-. +++-+ ...-+++++-.|
T Consensus 15 ~q~kl~~~~VlviG-~GglGs~ia~~La~~G--v~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-- 89 (202)
T TIGR02356 15 GQQRLLNSHVLIIG-AGGLGSPAALYLAGAG--VGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-- 89 (202)
T ss_pred HHHHhcCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC--
Confidence 35667899999999 6889999999999986 577888776643322222210 00000 112234444433
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+++.+...+. .++. ..+++++|+||.+... ++.. ..+-++|.+. + +.+|
T Consensus 90 -----~v~i~~~~~~i~-------~~~~-~~~~~~~D~Vi~~~d~------~~~r--------~~l~~~~~~~-~-ip~i 140 (202)
T TIGR02356 90 -----DIQVTALKERVT-------AENL-ELLINNVDLVLDCTDN------FATR--------YLINDACVAL-G-TPLI 140 (202)
T ss_pred -----CCEEEEehhcCC-------HHHH-HHHHhCCCEEEECCCC------HHHH--------HHHHHHHHHc-C-CCEE
Confidence 235556655555 3443 4677899999988643 2221 2345677775 4 5688
Q ss_pred EEecccccCC
Q 008315 159 HVSTAYVAGE 168 (570)
Q Consensus 159 ~vSTa~v~~~ 168 (570)
+.++...+|.
T Consensus 141 ~~~~~g~~G~ 150 (202)
T TIGR02356 141 SAAVVGFGGQ 150 (202)
T ss_pred EEEeccCeEE
Confidence 8887665543
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.13 Score=53.21 Aligned_cols=117 Identities=15% Similarity=0.053 Sum_probs=72.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCcc-----EEEEEEecCCc--ccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLLIRAADT--ESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~-----~i~~lvR~~~~--~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.-+|.|+||+|++|..++-.|+..+- +. .++++.+.+.. ...+ .+ ++.... .+ . .
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~-~~~~~~~el~L~Di~~~~~~a~g~-a~--Dl~~~~--------~~-----~-~ 64 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGEL-FGKDQPVVLHLLDIPPAMKALEGV-AM--ELEDCA--------FP-----L-L 64 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCc-ccCCCccEEEEEecCCcccccchH-HH--HHhhcc--------cc-----c-c
Confidence 35899999999999999999887542 34 67777775422 1111 11 121110 00 0 0
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCc-eEEEEEe
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKL-KVFVHVS 161 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-k~fV~vS 161 (570)
..+.+. + .+ ...++++|+||.+||..+ ..+...+.+..|+.-.+.+.+.+++. .. +.++.+-
T Consensus 65 ~~~~i~-~-----------~~--~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~-~~~~~iiivv 128 (323)
T TIGR01759 65 AGVVAT-T-----------DP--EEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV-AKKDVKVLVV 128 (323)
T ss_pred CCcEEe-c-----------Ch--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEEEe
Confidence 112211 1 11 145589999999999754 33556677999999999999988886 32 4444433
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.05 Score=48.82 Aligned_cols=37 Identities=24% Similarity=0.381 Sum_probs=32.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|+|.|| |..|+.++..|...|. ++|++..|+.
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~--~~i~i~nRt~ 46 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGA--KEITIVNRTP 46 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTS--SEEEEEESSH
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCC--CEEEEEECCH
Confidence 58999999996 8899999999999864 7889999974
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.046 Score=59.36 Aligned_cols=88 Identities=18% Similarity=0.193 Sum_probs=55.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+|+|+++ +|..+++.|++.|++| .+..+.... ...+++ +.+. ..++.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V---~~~d~~~~~-~~~~~~----------~~l~-----------~~~~~~ 56 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKV---ILTDEKEED-QLKEAL----------EELG-----------ELGIEL 56 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEE---EEEeCCchH-HHHHHH----------HHHH-----------hcCCEE
Confidence 4789999999888 9999999999999765 455553211 111111 1111 124667
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFG 135 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~ 135 (570)
+.+|.. + ....++|+||++++....++....+.+
T Consensus 57 ~~~~~~-------~-----~~~~~~d~vv~~~g~~~~~~~~~~a~~ 90 (450)
T PRK14106 57 VLGEYP-------E-----EFLEGVDLVVVSPGVPLDSPPVVQAHK 90 (450)
T ss_pred EeCCcc-------h-----hHhhcCCEEEECCCCCCCCHHHHHHHH
Confidence 778876 2 234679999999987533333344433
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.053 Score=56.78 Aligned_cols=33 Identities=21% Similarity=0.507 Sum_probs=25.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
++|.|.||||++|+.+++.|.+ -|.++-+.++.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~-hP~~el~~l~~ 33 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLN-HPEVEITYLVS 33 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHc-CCCceEEEEec
Confidence 4799999999999999999985 46665443434
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.19 Score=44.89 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=72.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H-HH-HH--hh-hhhHHHHHhhhccccccccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--F-QN-EV--LA-KDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--l-~~-~l--~~-~~~f~~l~~~~~~~~~~~~~ 84 (570)
+++|+|.| .|-+|+.+++.|.+.| |.++.+.....-..+-..| + .. ++ .+ ..+-+.+++..| .
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~G--v~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-------~ 71 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSG--VGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-------D 71 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHT--TSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-------T
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhC--CCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC-------c
Confidence 57999999 5889999999999987 4677776543321111011 0 00 00 00 011234444444 2
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
-++..+..+++ .+.. ..+++++|+||.|... .. .-..+-+.|++. + +.+|+.++..
T Consensus 72 ~~v~~~~~~~~-------~~~~-~~~~~~~d~vi~~~d~------~~--------~~~~l~~~~~~~-~-~p~i~~~~~g 127 (135)
T PF00899_consen 72 VEVEAIPEKID-------EENI-EELLKDYDIVIDCVDS------LA--------ARLLLNEICREY-G-IPFIDAGVNG 127 (135)
T ss_dssp SEEEEEESHCS-------HHHH-HHHHHTSSEEEEESSS------HH--------HHHHHHHHHHHT-T--EEEEEEEET
T ss_pred eeeeeeecccc-------cccc-cccccCCCEEEEecCC------HH--------HHHHHHHHHHHc-C-CCEEEEEeec
Confidence 56788888875 4554 4777899999998554 11 122355677775 4 4788888776
Q ss_pred ccC
Q 008315 165 VAG 167 (570)
Q Consensus 165 v~~ 167 (570)
.+|
T Consensus 128 ~~G 130 (135)
T PF00899_consen 128 FYG 130 (135)
T ss_dssp TEE
T ss_pred CEE
Confidence 554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.18 Score=49.96 Aligned_cols=128 Identities=19% Similarity=0.135 Sum_probs=77.5
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~~~~~ 78 (570)
-++-+++.+|+|.| .|.+|+.+++.|.+.| |.++.++.+..-..+-..|- .+++-+. ..-++|++-.|
T Consensus 18 ~q~~L~~~~VlvvG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp-- 92 (240)
T TIGR02355 18 GQEALKASRVLIVG-LGGLGCAASQYLAAAG--VGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP-- 92 (240)
T ss_pred HHHHHhCCcEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC--
Confidence 35667889999999 5889999999999976 67888877655443322220 0011111 11245555444
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+++.+...++ .++. ..++++.|+||.+.... +. ...+-++|.+. + ..||
T Consensus 93 -----~v~i~~~~~~i~-------~~~~-~~~~~~~DlVvd~~D~~------~~--------r~~ln~~~~~~-~-ip~v 143 (240)
T TIGR02355 93 -----HIAINPINAKLD-------DAEL-AALIAEHDIVVDCTDNV------EV--------RNQLNRQCFAA-K-VPLV 143 (240)
T ss_pred -----CcEEEEEeccCC-------HHHH-HHHhhcCCEEEEcCCCH------HH--------HHHHHHHHHHc-C-CCEE
Confidence 235666655554 3343 46788999999886542 21 12344677765 4 5688
Q ss_pred EEecccccC
Q 008315 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++...+|
T Consensus 144 ~~~~~g~~G 152 (240)
T TIGR02355 144 SGAAIRMEG 152 (240)
T ss_pred EEEecccEe
Confidence 876655444
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.16 Score=53.41 Aligned_cols=128 Identities=14% Similarity=0.028 Sum_probs=78.7
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.|+ |.+|+.+++.|.+.| |.++.++....-..+-..|- .+++-+. ..-++|++-.|
T Consensus 23 q~~L~~~~VlivG~-GGlGs~~a~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--- 96 (355)
T PRK05597 23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAG--VGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP--- 96 (355)
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC---
Confidence 45578899999995 889999999999876 67888877655332222220 0011111 12245555554
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++.+...++ .++. ..+++++|+||.|... ... -..+-++|.+. + ..||+
T Consensus 97 ----~v~v~~~~~~i~-------~~~~-~~~~~~~DvVvd~~d~------~~~--------r~~~n~~c~~~-~-ip~v~ 148 (355)
T PRK05597 97 ----DVKVTVSVRRLT-------WSNA-LDELRDADVILDGSDN------FDT--------RHLASWAAARL-G-IPHVW 148 (355)
T ss_pred ----CcEEEEEEeecC-------HHHH-HHHHhCCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 245777777776 4443 3677899999998754 111 11244566665 4 56888
Q ss_pred EecccccCC
Q 008315 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
.++....|.
T Consensus 149 ~~~~g~~g~ 157 (355)
T PRK05597 149 ASILGFDAQ 157 (355)
T ss_pred EEEecCeEE
Confidence 887666553
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.25 Score=51.27 Aligned_cols=121 Identities=12% Similarity=0.029 Sum_probs=71.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCcc-----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~-----~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+.++|.|+||+|.+|..++-.|+..+- .. .+.++.+.+.......... ++.... .+ ...
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~-~~~~~~~el~LiDi~~~~~~~~g~a~-Dl~~~~--------~~------~~~ 66 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDM-LGKDQPVILQLLEIPPALKALEGVVM-ELDDCA--------FP------LLA 66 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhh-cCCCCccEEEEEecCCcccccceeeh-hhhhhh--------hh------hcC
Confidence 346999999999999999999887542 23 6777766432210000000 111110 00 011
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceE-EEEEe
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKV-FVHVS 161 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~-fV~vS 161 (570)
++.+. + .+ .+.++++|+||-+||..+ ..+...+.+..|+.-.+++.+..++..+.+. ++.+|
T Consensus 67 ~~~i~-~-----------~~--y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 67 GVVIT-D-----------DP--NVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred CcEEe-c-----------Ch--HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 22221 1 12 145589999999999754 3456667799999999999988888422233 44444
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.28 Score=47.00 Aligned_cols=128 Identities=18% Similarity=0.202 Sum_probs=76.1
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHh---hhhhHHHHHhhhccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVL---AKDLFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~---~~~~f~~l~~~~~~~ 78 (570)
-++-+++++|+|.|++| +|..+++.|.+.| |++|.++....-..+-..|- .+++- ....-++|++-.|
T Consensus 15 ~Q~~L~~s~VlIiG~gg-lG~evak~La~~G--Vg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp-- 89 (197)
T cd01492 15 AQKRLRSARILLIGLKG-LGAEIAKNLVLSG--IGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP-- 89 (197)
T ss_pred HHHHHHhCcEEEEcCCH-HHHHHHHHHHHcC--CCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC--
Confidence 35557789999999766 9999999999976 67887776543322111110 00111 1122345555554
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+++++...+++ . .+..++++|+||.+... .+... .+-++|.+. ++ .||
T Consensus 90 -----~v~i~~~~~~~~~-------~--~~~~~~~~dvVi~~~~~------~~~~~--------~ln~~c~~~-~i-p~i 139 (197)
T cd01492 90 -----RVKVSVDTDDISE-------K--PEEFFSQFDVVVATELS------RAELV--------KINELCRKL-GV-KFY 139 (197)
T ss_pred -----CCEEEEEecCccc-------c--HHHHHhCCCEEEECCCC------HHHHH--------HHHHHHHHc-CC-CEE
Confidence 2356666665551 1 13556899999976432 22222 234677776 54 688
Q ss_pred EEecccccCC
Q 008315 159 HVSTAYVAGE 168 (570)
Q Consensus 159 ~vSTa~v~~~ 168 (570)
+.++...+|.
T Consensus 140 ~~~~~G~~G~ 149 (197)
T cd01492 140 ATGVHGLFGF 149 (197)
T ss_pred EEEecCCEEE
Confidence 8888776653
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.18 Score=51.04 Aligned_cols=128 Identities=13% Similarity=0.111 Sum_probs=76.5
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.| .|.+|+.+++.|.+.| |.+|.++....-..+-..|- .+++-+. ..-+++++-.|
T Consensus 22 Q~kL~~s~VlIvG-~GGLGs~va~~LA~aG--VG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP--- 95 (287)
T PRK08223 22 QQRLRNSRVAIAG-LGGVGGIHLLTLARLG--IGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP--- 95 (287)
T ss_pred HHHHhcCCEEEEC-CCHHHHHHHHHHHHhC--CCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC---
Confidence 5557889999999 5789999999999987 57887776654333222220 0011111 12345555544
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+|+.+...++ +++. .++++++|+|+.+.-...+ + .-..+-++|.+. + +.+|+
T Consensus 96 ----~v~V~~~~~~l~-------~~n~-~~ll~~~DlVvD~~D~~~~----~--------~r~~ln~~c~~~-~-iP~V~ 149 (287)
T PRK08223 96 ----ELEIRAFPEGIG-------KENA-DAFLDGVDVYVDGLDFFEF----D--------ARRLVFAACQQR-G-IPALT 149 (287)
T ss_pred ----CCEEEEEecccC-------ccCH-HHHHhCCCEEEECCCCCcH----H--------HHHHHHHHHHHc-C-CCEEE
Confidence 246777777777 3443 4778999999965432111 1 112345567776 4 56787
Q ss_pred Eeccccc
Q 008315 160 VSTAYVA 166 (570)
Q Consensus 160 vSTa~v~ 166 (570)
.|+....
T Consensus 150 ~~~~g~~ 156 (287)
T PRK08223 150 AAPLGMG 156 (287)
T ss_pred EeccCCe
Confidence 7654433
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.58 Score=50.43 Aligned_cols=109 Identities=13% Similarity=0.049 Sum_probs=70.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh---C---CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV---Q---PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~---g---~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+--+|.|+||+|.+|.+++-.|+.. | .-+..++++.+.++....+.. +|..+.. | + .
T Consensus 99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~am---DL~daa~--------~-----~-~ 161 (444)
T PLN00112 99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAM---ELEDSLY--------P-----L-L 161 (444)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHH---HHHHhhh--------h-----h-c
Confidence 3458999999999999999998875 1 233467777666554333221 2222110 0 0 1
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHH
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
.++.+..+| + +.++++|+||-+||..+- .+.-.+.++.|+.-.+.+.+...+
T Consensus 162 ~~v~i~~~~------------y--e~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 162 REVSIGIDP------------Y--EVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred CceEEecCC------------H--HHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 223222222 1 445899999999998543 345667799999999999999988
|
|
| >PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.11 Score=60.01 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=53.6
Q ss_pred HHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHh-cCCC-----CCCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 280 LFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAH-AKQP-----SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 280 ~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~-~~~~-----~~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
+..+.+.|.++.+|.+-.....++|+|...++.+.+.-.. .+.. ...+.--|+++.++.+-|+-+.+++..|+|
T Consensus 236 ~~~~~a~g~~~~~p~~~~~p~~~~p~d~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vwgm~~~ylm~yy~ 315 (1108)
T PTZ00374 236 VCLGVALGTVKHLPVGFRDPATVTPLDVALNTALLAVLLLCHGGLAECVECAAEMQLCGAPGDNSLVWGMVAEYLMDYYG 315 (1108)
T ss_pred HHHHHhhhhhhcccccCCCCceeccHHHHHHHHHHHHHHHhcCChHHHhcchhhheeccCCccceeeHHHHHHHHHHHHh
Confidence 4456778888888877777888999999888765443222 1111 112334466767799999999999999988
Q ss_pred cC
Q 008315 354 KK 355 (570)
Q Consensus 354 ~~ 355 (570)
+.
T Consensus 316 r~ 317 (1108)
T PTZ00374 316 RF 317 (1108)
T ss_pred hh
Confidence 64
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.037 Score=57.75 Aligned_cols=36 Identities=22% Similarity=0.297 Sum_probs=30.5
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+|+|.||||++|..|++.|.++++.+..+..+.|..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~ 36 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR 36 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc
Confidence 589999999999999999988877777777776653
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.21 Score=49.05 Aligned_cols=128 Identities=20% Similarity=0.109 Sum_probs=75.9
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H-HHHhh---hhhHHHHHhhhccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---Q-NEVLA---KDLFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~-~~l~~---~~~f~~l~~~~~~~ 78 (570)
.++-+++++|+|.| .|-+|+.+++.|.+.| |.++.+.....-..+-..|- . +++-+ ..+-+++++-.|
T Consensus 15 ~q~~L~~~~VlivG-~GglGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-- 89 (228)
T cd00757 15 GQEKLKNARVLVVG-AGGLGSPAAEYLAAAG--VGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-- 89 (228)
T ss_pred HHHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC--
Confidence 35567889999999 6889999999999987 57777664433211111110 0 01100 112234444443
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-++..+..+++ .++. ..+++++|+||.|.... .. -..+-++|.+. + ..+|
T Consensus 90 -----~~~i~~~~~~i~-------~~~~-~~~~~~~DvVi~~~d~~------~~--------r~~l~~~~~~~-~-ip~i 140 (228)
T cd00757 90 -----DVEIEAYNERLD-------AENA-EELIAGYDLVLDCTDNF------AT--------RYLINDACVKL-G-KPLV 140 (228)
T ss_pred -----CCEEEEecceeC-------HHHH-HHHHhCCCEEEEcCCCH------HH--------HHHHHHHHHHc-C-CCEE
Confidence 235666666665 3443 46778999999986642 11 12355677775 4 5788
Q ss_pred EEecccccC
Q 008315 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++....|
T Consensus 141 ~~g~~g~~g 149 (228)
T cd00757 141 SGAVLGFEG 149 (228)
T ss_pred EEEeccCEE
Confidence 887765544
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.024 Score=55.68 Aligned_cols=24 Identities=25% Similarity=0.427 Sum_probs=20.0
Q ss_pred EEEC-CccHhHHHHHHHHHHhCCCc
Q 008315 16 LVSG-VTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 16 lITG-aTGFlG~~Lve~Ll~~g~~V 39 (570)
+||. +||++|.++++.|++.|+.|
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~V 42 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEV 42 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEE
Confidence 4443 58999999999999999765
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.064 Score=56.06 Aligned_cols=38 Identities=24% Similarity=0.318 Sum_probs=30.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
+..+|.|.||||++|..|++.|.++++.+..+..+...
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~ 43 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASA 43 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEcc
Confidence 45789999999999999999998877666667666443
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.49 Score=46.56 Aligned_cols=125 Identities=20% Similarity=0.150 Sum_probs=73.8
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLA---KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.| .|-+|+.+++.|.+.| |.++.++....-..+-..|. .+++-+ ..+-+++++-+|
T Consensus 6 ~~~L~~~~VlVvG-~GGvGs~va~~Lar~G--Vg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP--- 79 (231)
T cd00755 6 LEKLRNAHVAVVG-LGGVGSWAAEALARSG--VGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP--- 79 (231)
T ss_pred HHHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC---
Confidence 4456789999999 6889999999999987 57787776544322222220 001111 112345555544
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHh-CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELW-NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+++.+...++ .+... .++ ++.|+||.|.... . ....+.++|.+. + ..||
T Consensus 80 ----~~~V~~~~~~i~-------~~~~~-~l~~~~~D~VvdaiD~~------~--------~k~~L~~~c~~~-~-ip~I 131 (231)
T cd00755 80 ----ECEVDAVEEFLT-------PDNSE-DLLGGDPDFVVDAIDSI------R--------AKVALIAYCRKR-K-IPVI 131 (231)
T ss_pred ----CcEEEEeeeecC-------HhHHH-HHhcCCCCEEEEcCCCH------H--------HHHHHHHHHHHh-C-CCEE
Confidence 246777777766 33433 444 5699999886542 1 223466788876 4 4566
Q ss_pred EEecccc
Q 008315 159 HVSTAYV 165 (570)
Q Consensus 159 ~vSTa~v 165 (570)
...+++-
T Consensus 132 ~s~g~g~ 138 (231)
T cd00755 132 SSMGAGG 138 (231)
T ss_pred EEeCCcC
Confidence 6555443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.49 Score=46.60 Aligned_cols=128 Identities=20% Similarity=0.183 Sum_probs=76.5
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---h-hhHHHHHhhhccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLA---K-DLFNVLKEKWGTR 78 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~---~-~~f~~l~~~~~~~ 78 (570)
++-+++++|+|.| .|-+|+.+++.|.+.| |.+++++....-..+-..|- .+++-+ . ..-.++++-.|
T Consensus 22 q~~L~~~~VlIiG-~GGlGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np-- 96 (231)
T PRK08328 22 QEKLKKAKVAVVG-VGGLGSPVAYYLAAAG--VGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNS-- 96 (231)
T ss_pred HHHHhCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCC--
Confidence 4456789999999 5889999999999976 57888876554333222220 001100 0 01123343333
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+++.+.+.++ +++. +.++++.|+||.|.... +.- ..+-++|.+. + ..+|
T Consensus 97 -----~v~v~~~~~~~~-------~~~~-~~~l~~~D~Vid~~d~~------~~r--------~~l~~~~~~~-~-ip~i 147 (231)
T PRK08328 97 -----DIKIETFVGRLS-------EENI-DEVLKGVDVIVDCLDNF------ETR--------YLLDDYAHKK-G-IPLV 147 (231)
T ss_pred -----CCEEEEEeccCC-------HHHH-HHHHhcCCEEEECCCCH------HHH--------HHHHHHHHHc-C-CCEE
Confidence 235666666665 4443 46788999999886542 111 1233566665 4 5688
Q ss_pred EEecccccCC
Q 008315 159 HVSTAYVAGE 168 (570)
Q Consensus 159 ~vSTa~v~~~ 168 (570)
+.++...+|.
T Consensus 148 ~g~~~g~~G~ 157 (231)
T PRK08328 148 HGAVEGTYGQ 157 (231)
T ss_pred EEeeccCEEE
Confidence 8888777664
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.76 Score=47.30 Aligned_cols=112 Identities=20% Similarity=0.130 Sum_probs=69.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||||.+|..++-.|...+ -+..+.++.+.+....+ . +|.... ...++....+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~-~~~elvLiDi~~a~g~a-l----DL~~~~----------------~~~~i~~~~~ 58 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNP-LVSELALYDIVNTPGVA-A----DLSHIN----------------TPAKVTGYLG 58 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEEEecCccceee-h----HhHhCC----------------CcceEEEecC
Confidence 489999999999999999887654 34567676665211111 1 111100 0011211111
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
+.+. ...++++|+||-+||..+ ..+.-.+.++.|..-.+.+.+..++. +.+.++
T Consensus 59 ----------~~~~-y~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~-~p~a~v 113 (310)
T cd01337 59 ----------PEEL-KKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA-CPKALI 113 (310)
T ss_pred ----------CCch-HHhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEE
Confidence 1222 255689999999999854 34556677999999999999888776 444443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.24 Score=52.76 Aligned_cols=128 Identities=19% Similarity=0.152 Sum_probs=77.6
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H--HHHHhhh---hhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--F--QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--l--~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.| .|.+|..+++.|.+.| |.+|.++....-..+-..| + .+++-+. ..-++|++..|
T Consensus 37 q~~L~~~~VlviG-~GGlGs~va~~La~~G--vg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--- 110 (392)
T PRK07878 37 QKRLKNARVLVIG-AGGLGSPTLLYLAAAG--VGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINP--- 110 (392)
T ss_pred HHHHhcCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCC---
Confidence 4456789999999 5889999999999977 5777776654433222222 0 0011111 11234555444
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+|+.+...++ .++. ..+++++|+|+.|... ... -..+-++|.+. + +.||+
T Consensus 111 ----~v~i~~~~~~i~-------~~~~-~~~~~~~D~Vvd~~d~------~~~--------r~~ln~~~~~~-~-~p~v~ 162 (392)
T PRK07878 111 ----LVNVRLHEFRLD-------PSNA-VELFSQYDLILDGTDN------FAT--------RYLVNDAAVLA-G-KPYVW 162 (392)
T ss_pred ----CcEEEEEeccCC-------hhHH-HHHHhcCCEEEECCCC------HHH--------HHHHHHHHHHc-C-CCEEE
Confidence 245666777776 3333 4678899999987643 111 11244567765 4 56999
Q ss_pred EecccccCC
Q 008315 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
.++...+|.
T Consensus 163 ~~~~g~~G~ 171 (392)
T PRK07878 163 GSIYRFEGQ 171 (392)
T ss_pred EEeccCEEE
Confidence 888777764
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.097 Score=53.15 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=50.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
..++|-|||||.|+.++|+|.++|..- .+-.|+. ++ .++++.+.+.++.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~---aLAgRs~------~k----------l~~l~~~LG~~~~------------ 55 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTA---ALAGRSS------AK----------LDALRASLGPEAA------------ 55 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCch---hhccCCH------HH----------HHHHHHhcCcccc------------
Confidence 468999999999999999999998543 3334432 11 2344455443221
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v 124 (570)
.+.+-.++..+++++.+++|+||+|+.
T Consensus 56 -----~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 56 -----VFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred -----ccCCCCHHHHHHHHhcceEEEeccccc
Confidence 111112445568889999999999984
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.2 Score=59.37 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=50.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCcc------------EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVK------------KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTR 78 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~------------~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~ 78 (570)
+.|+|+|.|| |++|+..++.|.+. +++. .|.+..+... ..+++.+ .
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~---~a~~la~-------------~---- 625 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLK---DAKETVE-------------G---- 625 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHH---HHHHHHH-------------h----
Confidence 4679999996 99999999999875 4433 2333333221 1122221 1
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCcc
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~ 123 (570)
.+++..+..|+++ .+.+..+++++|+|+.|...
T Consensus 626 -----~~~~~~v~lDv~D-------~e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 626 -----IENAEAVQLDVSD-------SESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred -----cCCCceEEeecCC-------HHHHHHhhcCCCEEEECCCc
Confidence 1356788999884 33344666889999998876
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.58 Score=47.02 Aligned_cols=127 Identities=15% Similarity=0.164 Sum_probs=72.1
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-H---HHHHhh---hhhHHHHHhhhccccc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR-F---QNEVLA---KDLFNVLKEKWGTRLN 80 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r-l---~~~l~~---~~~f~~l~~~~~~~~~ 80 (570)
+-+++.+|+|.| .|.+|+++++.|.+.| |.++.++....-..+-..| + .+++-+ ..+-+++++-+|
T Consensus 26 ~kL~~s~VlVvG-~GGVGs~vae~Lar~G--Vg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP---- 98 (268)
T PRK15116 26 QLFADAHICVVG-IGGVGSWAAEALARTG--IGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINP---- 98 (268)
T ss_pred HHhcCCCEEEEC-cCHHHHHHHHHHHHcC--CCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCC----
Confidence 346789999999 6889999999999987 5777777654322221112 0 000100 012344554444
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHh-CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELW-NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+|..+..-++ .+.. +.++ .+.|+||.+..... .-..+.+.|++. + ..||+
T Consensus 99 ---~~~V~~i~~~i~-------~e~~-~~ll~~~~D~VIdaiD~~~--------------~k~~L~~~c~~~-~-ip~I~ 151 (268)
T PRK15116 99 ---ECRVTVVDDFIT-------PDNV-AEYMSAGFSYVIDAIDSVR--------------PKAALIAYCRRN-K-IPLVT 151 (268)
T ss_pred ---CcEEEEEecccC-------hhhH-HHHhcCCCCEEEEcCCCHH--------------HHHHHHHHHHHc-C-CCEEE
Confidence 235666544333 3333 2444 47999998876521 122467778775 4 45666
Q ss_pred EecccccCC
Q 008315 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
+..+..-.+
T Consensus 152 ~gGag~k~d 160 (268)
T PRK15116 152 TGGAGGQID 160 (268)
T ss_pred ECCcccCCC
Confidence 655554333
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.40 E-value=1.1 Score=46.15 Aligned_cols=114 Identities=16% Similarity=0.151 Sum_probs=70.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|+ |.+|..++..|+..|.. ..|+++.|....... +..++.....+ ....+....+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~-~ei~l~D~~~~~~~~---~a~dL~~~~~~--------------~~~~~~i~~~ 61 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIA-DELVLIDINEEKAEG---EALDLEDALAF--------------LPSPVKIKAG 61 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCC-CEEEEEeCCcchhhH---hHhhHHHHhhc--------------cCCCeEEEcC
Confidence 47999995 99999999999987642 367788886543222 12122111100 0112222211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
| . ..++++|+||.+++..+- .+.-.+.+..|..-.+.+.+..++. +.+.++.+
T Consensus 62 ~------------~--~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~-~~~~~viv 115 (306)
T cd05291 62 D------------Y--SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLV 115 (306)
T ss_pred C------------H--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 224799999999997543 2345567899999999999988886 33444433
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.51 Score=50.04 Aligned_cols=127 Identities=18% Similarity=0.102 Sum_probs=74.3
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh--h-hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVL--A-KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.++.++.+..-..+-..|-. +++- + ..+-+++++..|
T Consensus 130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~G--vg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 203 (376)
T PRK08762 130 QRRLLEARVLLIGA-GGLGSPAALYLAAAG--VGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP--- 203 (376)
T ss_pred HHHHhcCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC---
Confidence 34568899999985 789999999999987 578888877632222111100 0000 0 011234444433
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-++..+...++ ..+. ..+++++|+||.+.... ..- ..+-++|.+. + ..+|+
T Consensus 204 ----~v~v~~~~~~~~-------~~~~-~~~~~~~D~Vv~~~d~~------~~r--------~~ln~~~~~~-~-ip~i~ 255 (376)
T PRK08762 204 ----DVQVEAVQERVT-------SDNV-EALLQDVDVVVDGADNF------PTR--------YLLNDACVKL-G-KPLVY 255 (376)
T ss_pred ----CCEEEEEeccCC-------hHHH-HHHHhCCCEEEECCCCH------HHH--------HHHHHHHHHc-C-CCEEE
Confidence 134555555555 3333 46778999999987652 111 1244667775 4 57888
Q ss_pred EecccccC
Q 008315 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 256 ~~~~g~~g 263 (376)
T PRK08762 256 GAVFRFEG 263 (376)
T ss_pred EEeccCEE
Confidence 87765544
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.25 Score=51.70 Aligned_cols=33 Identities=15% Similarity=0.373 Sum_probs=26.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++|+|.||||++|+.+++.|.+. +.+ ++.++.+
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~-p~~-elv~v~~ 35 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNH-PEV-EIVAVTS 35 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCc-eEEEEEC
Confidence 68999999999999999999864 555 4445454
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=94.24 E-value=1.2 Score=47.30 Aligned_cols=118 Identities=13% Similarity=0.077 Sum_probs=70.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCcc-----EEEEE--EecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLL--IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~-----~i~~l--vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.-+|.|+||+|.+|..++-.|+..+- .. .++++ .+.++....+. . +|..+. .| + .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l-~~~~~ei~L~L~diD~~~~~a~g~a--~-DL~d~a--------~~-----~-~ 105 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEV-FGQDQPIALKLLGSERSKEALEGVA--M-ELEDSL--------YP-----L-L 105 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccc-cCCCCceEEEEeccCccchhhhHHH--H-HHHHhh--------hh-----h-c
Confidence 45899999999999999999987542 22 22233 33332222111 1 222211 00 0 1
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceE-EEEEe
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKV-FVHVS 161 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~-fV~vS 161 (570)
.++.+..+| ...++++|+||-+||..+- .+...+.+..|+.-.+.+.+...+..+... ++.+|
T Consensus 106 ~~v~i~~~~--------------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 106 REVSIGIDP--------------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred CceEEecCC--------------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 223322222 1445899999999998643 345667799999999999999988433444 44444
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.11 Score=54.17 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=29.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
.+|.|+||||++|..|++.|.++++.+..+..+..
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s 39 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS 39 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC
Confidence 68999999999999999999987766666666543
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.51 Score=50.31 Aligned_cols=128 Identities=15% Similarity=0.078 Sum_probs=79.8
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H--HHHHhh---hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--F--QNEVLA---KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--l--~~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-++..+|+|.| .|-+|..+++.|.+.| |.++.+.....-..+-..| + .+++-+ ...-++|++-.|
T Consensus 33 q~~L~~~~VlivG-~GGlG~~va~~La~~G--vg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np--- 106 (390)
T PRK07411 33 QKRLKAASVLCIG-TGGLGSPLLLYLAAAG--IGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINP--- 106 (390)
T ss_pred HHHHhcCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCC---
Confidence 4556789999999 5779999999999976 6778777655433322222 0 011111 122355665554
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+|+.+...++ .+.. ..+++++|+|+.|.... +.-+ .+-++|.+. + +.+|+
T Consensus 107 ----~v~v~~~~~~~~-------~~~~-~~~~~~~D~Vvd~~d~~------~~r~--------~ln~~~~~~-~-~p~v~ 158 (390)
T PRK07411 107 ----YCQVDLYETRLS-------SENA-LDILAPYDVVVDGTDNF------PTRY--------LVNDACVLL-N-KPNVY 158 (390)
T ss_pred ----CCeEEEEecccC-------HHhH-HHHHhCCCEEEECCCCH------HHHH--------HHHHHHHHc-C-CCEEE
Confidence 246788888777 3333 36778999999986642 2111 133556654 3 67888
Q ss_pred EecccccCC
Q 008315 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
.+...-+|.
T Consensus 159 ~~~~g~~g~ 167 (390)
T PRK07411 159 GSIFRFEGQ 167 (390)
T ss_pred EEEccCEEE
Confidence 887776653
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.21 Score=52.48 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=27.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.+|.|+||||++|+.|++.|++ .+.+ ++.+++++.
T Consensus 4 ~~V~I~GatG~iG~~l~~~L~~-~p~~-el~~~~~s~ 38 (349)
T PRK08664 4 LKVGILGATGMVGQRFVQLLAN-HPWF-EVTALAASE 38 (349)
T ss_pred cEEEEECCCCHHHHHHHHHHHc-CCCc-eEEEEEcCh
Confidence 6899999999999999998886 4554 555665553
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.87 Score=44.20 Aligned_cols=129 Identities=21% Similarity=0.150 Sum_probs=73.7
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---HHHHhhh---hhHHHHHhhhcccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
.++-+++.+|+|.| .|-+|+.+++.|.+.| |.++.+.....-..+-..|- .+++-+. ..-+++++-.|
T Consensus 22 ~q~~L~~~~V~ViG-~GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp--- 95 (212)
T PRK08644 22 LLEKLKKAKVGIAG-AGGLGSNIAVALARSG--VGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP--- 95 (212)
T ss_pred HHHHHhCCCEEEEC-cCHHHHHHHHHHHHcC--CCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC---
Confidence 35567889999999 5889999999999976 56777777653222111110 0011100 11223333333
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++.+...++ +++. ..+++++|+||.|... +.. ...+.+.|.+..+ ..+|+
T Consensus 96 ----~v~v~~~~~~i~-------~~~~-~~~~~~~DvVI~a~D~------~~~--------r~~l~~~~~~~~~-~p~I~ 148 (212)
T PRK08644 96 ----FVEIEAHNEKID-------EDNI-EELFKDCDIVVEAFDN------AET--------KAMLVETVLEHPG-KKLVA 148 (212)
T ss_pred ----CCEEEEEeeecC-------HHHH-HHHHcCCCEEEECCCC------HHH--------HHHHHHHHHHhCC-CCEEE
Confidence 245666766666 3443 4677899999988422 221 1234556665422 56787
Q ss_pred EecccccC
Q 008315 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.|...-++
T Consensus 149 ~~~~~~~~ 156 (212)
T PRK08644 149 ASGMAGYG 156 (212)
T ss_pred eehhhccC
Confidence 76544443
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.72 E-value=1.1 Score=45.89 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=72.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|+.++-.|+..+.. ..++++.+.+....... + ++.....+ ....+ .+.+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~-~el~LiDi~~~~~~G~a-~--DL~~~~~~--------------~~~~~-~i~~ 60 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLG-SELVLIDINEEKAEGVA-L--DLSHAAAP--------------LGSDV-KITG 60 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhccccc-ceEEEEEcccccccchh-c--chhhcchh--------------ccCce-EEec
Confidence 57999999 99999999999765542 27777777743322211 1 12111100 01111 2222
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
| .++ ..++++|+|+-+||..+- ...-.+.+..|..-.+.+.+...+. +.+.++.|-|
T Consensus 61 ~----------~~y--~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~-~~d~ivlVvt 118 (313)
T COG0039 61 D----------GDY--EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY-APDAIVLVVT 118 (313)
T ss_pred C----------CCh--hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCeEEEEec
Confidence 2 111 445899999999987653 3455677899999999998888776 4456665544
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.45 Score=54.42 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=75.8
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---HHHHhhhh---hHHHHHhhhcccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---QNEVLAKD---LFNVLKEKWGTRL 79 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~~~l~~~~---~f~~l~~~~~~~~ 79 (570)
-++-+++.+|+|.|+ | +|+.+++.|.+.|- |.++.+.....-..+-..|. ..++-..+ .-.++++-+|
T Consensus 101 ~Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGv-vG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp--- 174 (722)
T PRK07877 101 EQERLGRLRIGVVGL-S-VGHAIAHTLAAEGL-CGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP--- 174 (722)
T ss_pred HHHHHhcCCEEEEEe-c-HHHHHHHHHHHccC-CCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCC---
Confidence 355678899999999 8 99999999999871 26777776654444433442 00111111 1234444443
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHH-HHHHHHHccCceEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIH-LVNFAKKCVKLKVFV 158 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~-ll~~a~~~~~lk~fV 158 (570)
.-+|+.+...++ .++. +.+++++|+|+.|.-. ++ ++. +-+.|.+. + ..+|
T Consensus 175 ----~i~v~~~~~~i~-------~~n~-~~~l~~~DlVvD~~D~------~~---------~R~~ln~~a~~~-~-iP~i 225 (722)
T PRK07877 175 ----YLPVEVFTDGLT-------EDNV-DAFLDGLDVVVEECDS------LD---------VKVLLREAARAR-R-IPVL 225 (722)
T ss_pred ----CCEEEEEeccCC-------HHHH-HHHhcCCCEEEECCCC------HH---------HHHHHHHHHHHc-C-CCEE
Confidence 246788888877 4554 5788999999998653 11 222 33566665 3 4577
Q ss_pred EEecc
Q 008315 159 HVSTA 163 (570)
Q Consensus 159 ~vSTa 163 (570)
+.|++
T Consensus 226 ~~~~~ 230 (722)
T PRK07877 226 MATSD 230 (722)
T ss_pred EEcCC
Confidence 76643
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.62 E-value=1.4 Score=45.41 Aligned_cols=111 Identities=16% Similarity=0.062 Sum_probs=70.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE-
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA- 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~- 91 (570)
++|.|+|+ |.+|..++-.|+..+ -...++++.+.++...... . ++.....| .....+..
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~-~~~el~LiD~~~~~~~g~a--~-Dl~~~~~~---------------~~~~~v~~~ 63 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKG-LADELVLVDVVEDKLKGEA--M-DLQHGSAF---------------LKNPKIEAD 63 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHH--H-HHHHhhcc---------------CCCCEEEEC
Confidence 58999996 999999999888764 4467777777653222211 1 22222111 01112222
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
+| + +.++++|+||-+||..+- .+.-.+.+..|..-.+.+.+..++. +.+.++
T Consensus 64 ~d------------y--~~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~v 116 (312)
T cd05293 64 KD------------Y--SVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY-SPNAIL 116 (312)
T ss_pred CC------------H--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEE
Confidence 22 2 225899999999997543 3455677899999999999988886 434433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.57 E-value=1.8 Score=44.60 Aligned_cols=114 Identities=12% Similarity=0.082 Sum_probs=72.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc-CceEEEEc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS-EKITFVAG 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~-~kv~~v~g 92 (570)
+|.|.|+ |.+|..++..|+.++ -+..++++...++...... . +|.....| .. .++.+..+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~a~g~a--~-DL~~~~~~--------------~~~~~~~i~~~ 61 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALG-LFSEIVLIDVNEGVAEGEA--L-DFHHATAL--------------TYSTNTKIRAG 61 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCcchhhHHH--H-HHHhhhcc--------------CCCCCEEEEEC
Confidence 4789997 999999999998754 4467777776543322211 1 22221111 11 23444433
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccC--HHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DER--YDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~--~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
| . +.++++|+||-+||..+- .+. -.+.+..|+.-.+.+.+...+. +...++.+-
T Consensus 62 ~-------------y-~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~-~p~~i~ivv 118 (307)
T cd05290 62 D-------------Y-DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV-TKEAVIILI 118 (307)
T ss_pred C-------------H-HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence 3 1 344899999999998543 333 3567899999999999988876 445554443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=93.34 E-value=1.8 Score=38.91 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=69.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccccccccCc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|+|.|+ |-+|..+++.|.+.|. .++.++....-..+-..|- .+++-+. .+-+++++-.| .-+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv--~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p-------~v~ 70 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV--GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP-------GVN 70 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC--CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC-------CcE
Confidence 5899995 9999999999999774 6777765443222111110 0011000 11233444333 235
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
++.+..++.. ... ...+++.|+||.|.... . ....+-++|++. + ..|+.+++....
T Consensus 71 i~~~~~~~~~-------~~~-~~~~~~~diVi~~~d~~------~--------~~~~l~~~~~~~-~-i~~i~~~~~g~~ 126 (143)
T cd01483 71 VTAVPEGISE-------DNL-DDFLDGVDLVIDAIDNI------A--------VRRALNRACKEL-G-IPVIDAGGLGLG 126 (143)
T ss_pred EEEEeeecCh-------hhH-HHHhcCCCEEEECCCCH------H--------HHHHHHHHHHHc-C-CCEEEEcCCCcE
Confidence 6666666652 222 36678999999887651 1 223455778776 3 568888776644
Q ss_pred C
Q 008315 167 G 167 (570)
Q Consensus 167 ~ 167 (570)
|
T Consensus 127 g 127 (143)
T cd01483 127 G 127 (143)
T ss_pred E
Confidence 4
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=93.32 E-value=2.6 Score=45.57 Aligned_cols=121 Identities=13% Similarity=0.048 Sum_probs=71.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHh---CCCcc-EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRV---QPNVK-KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~---g~~V~-~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-+|+||||+|.+|-+|+-.|.+- |++-. .+.++..+..........- ++..+. | | ....+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~am-DL~D~a-~-------p------ll~~v 187 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVM-EVEDLA-F-------P------LLRGI 187 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHH-HHHHhH-H-------h------hcCCc
Confidence 358999999999999999888751 33211 2444444322221111111 232221 0 1 01233
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccC--ceEEEEEe
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVK--LKVFVHVS 161 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~--lk~fV~vS 161 (570)
.+..+| ...++++|+||-+||..+- .+...+.++.|+.-.+.+.+...+... .+.+|.+|
T Consensus 188 ~i~~~~--------------~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 188 SVTTDL--------------DVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred EEEECC--------------HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 333211 2556899999999997543 345667799999999999998887633 44444443
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.43 Score=51.73 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=28.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
+++|+|+|||++| +|...++.|++.|..| ++..+.
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V---~~~d~~ 37 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANV---TVNDGK 37 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEE---EEEcCC
Confidence 4689999999988 9999999999999654 454443
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.22 E-value=6.7 Score=36.01 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=27.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKL 42 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i 42 (570)
+-.+|+|-||-|-+|+++++.+.+.++-|..|
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~si 33 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSI 33 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEE
Confidence 34689999999999999999999999877555
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=93.19 E-value=1.3 Score=45.73 Aligned_cols=111 Identities=20% Similarity=0.166 Sum_probs=67.6
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|.|+||+|.+|..++-.|+..+ -+..+.++.+.+....+. +|.... ...++....+|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~-~~~elvL~Di~~a~g~a~-----DL~~~~----------------~~~~i~~~~~~ 58 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQP-YVSELSLYDIAGAAGVAA-----DLSHIP----------------TAASVKGFSGE 58 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCC-CCcEEEEecCCCCcEEEc-----hhhcCC----------------cCceEEEecCC
Confidence 58999999999999999887754 445677776654111110 111000 00111111111
Q ss_pred CCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 94 ISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.+. ...++++|+||-+||..+- .....+.+..|+.-.+.+.+...+. +.+.++
T Consensus 59 ----------~~~-~~~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~-~p~~ii 112 (312)
T TIGR01772 59 ----------EGL-ENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES-CPKAMI 112 (312)
T ss_pred ----------Cch-HHHcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh-CCCeEE
Confidence 112 2566899999999997543 3455667899999999998877776 334433
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.89 Score=40.05 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=27.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++|.|.|++|-+|+.+++.++++ +++.-+-++.|+.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCC
Confidence 47999999999999999999983 4444455555654
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.14 E-value=0.69 Score=46.01 Aligned_cols=117 Identities=24% Similarity=0.246 Sum_probs=77.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+-+|.|.||.|.||+-|- .||+.+|.|..+.+..-. ...-|.
T Consensus 28 ~~KVAvlGAaGGIGQPLS-LLlK~np~Vs~LaLYDi~-------------------------------------~~~GVa 69 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLS-LLLKLNPLVSELALYDIA-------------------------------------NTPGVA 69 (345)
T ss_pred cceEEEEecCCccCccHH-HHHhcCcccceeeeeecc-------------------------------------cCCccc
Confidence 468999999999999975 466678988765443211 111233
Q ss_pred ccCCCCC-----CCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 92 GDISSED-----LGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 92 gDl~~~~-----lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
.|++.-+ .|...++.++..+++.|+|+--||..+-. -.-++.+++|..-.+.+..++.++ -.+.+|.+=|--|
T Consensus 70 aDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIsNPV 148 (345)
T KOG1494|consen 70 ADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVISNPV 148 (345)
T ss_pred ccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeecCcc
Confidence 3333322 12223344568889999999999986532 345678999999999999988775 3355566555444
Q ss_pred cC
Q 008315 166 AG 167 (570)
Q Consensus 166 ~~ 167 (570)
|.
T Consensus 149 Ns 150 (345)
T KOG1494|consen 149 NS 150 (345)
T ss_pred cc
Confidence 43
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=92.87 E-value=1.1 Score=47.37 Aligned_cols=128 Identities=19% Similarity=0.154 Sum_probs=76.5
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.| .|-+|..++..|.+.| |.++.+.....-..+-..|- .+++-+. ..-.+|++-.|
T Consensus 36 q~~l~~~~VliiG-~GglG~~v~~~La~~G--vg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np--- 109 (370)
T PRK05600 36 QERLHNARVLVIG-AGGLGCPAMQSLASAG--VGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP--- 109 (370)
T ss_pred HHHhcCCcEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC---
Confidence 4456789999999 5889999999999976 57887776654322222220 0011111 11234444443
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++.+...++ .+.. ..+++++|+||.|.... +. -..+-++|.+. + ..+|+
T Consensus 110 ----~v~i~~~~~~i~-------~~~~-~~~~~~~DlVid~~Dn~------~~--------r~~in~~~~~~-~-iP~v~ 161 (370)
T PRK05600 110 ----DIRVNALRERLT-------AENA-VELLNGVDLVLDGSDSF------AT--------KFLVADAAEIT-G-TPLVW 161 (370)
T ss_pred ----CCeeEEeeeecC-------HHHH-HHHHhCCCEEEECCCCH------HH--------HHHHHHHHHHc-C-CCEEE
Confidence 235667766666 3443 46789999999886652 21 11234566665 4 46888
Q ss_pred EecccccCC
Q 008315 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
.+....+|.
T Consensus 162 ~~~~g~~G~ 170 (370)
T PRK05600 162 GTVLRFHGE 170 (370)
T ss_pred EEEecCEEE
Confidence 877655553
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.73 Score=49.99 Aligned_cols=73 Identities=19% Similarity=0.285 Sum_probs=49.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.|+ |.+|+.+++.|.+.|.+| +++.|+... .+.+. + ...+.++.|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v---~vid~~~~~---~~~~~-------------~----------~~~~~~~~g 50 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDV---TVIDTDEER---LRRLQ-------------D----------RLDVRTVVG 50 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcE---EEEECCHHH---HHHHH-------------h----------hcCEEEEEe
Confidence 57999997 999999999999988654 455554321 11111 0 135788999
Q ss_pred cCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 93 DISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
|.++ .+.++.+ ++++|.||-+..
T Consensus 51 d~~~-------~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 51 NGSS-------PDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CCCC-------HHHHHHcCCCcCCEEEEecC
Confidence 9984 3334455 678999886654
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.73 E-value=0.26 Score=51.22 Aligned_cols=37 Identities=32% Similarity=0.364 Sum_probs=29.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++.+|.|.||||++|..|++.|.++.+.+.++..+..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 4679999999999999999988876555566766644
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.2 Score=51.39 Aligned_cols=37 Identities=30% Similarity=0.326 Sum_probs=31.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++|.|.||||-+|+.+++.|-++.+.+..++++...+
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r 38 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR 38 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc
Confidence 6899999999999999999999888888777766543
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=92.54 E-value=2.3 Score=40.85 Aligned_cols=97 Identities=19% Similarity=0.268 Sum_probs=58.3
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H-HHHHhhh---hhHHHHHhhhcccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--F-QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--l-~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
.++-++.++|+|.|+ |.+|+.+++.|.+.| |.++++..+..-..+-..| + .+++-+. ..-+++++-.|
T Consensus 15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~G--vg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp--- 88 (200)
T TIGR02354 15 IVQKLEQATVAICGL-GGLGSNVAINLARAG--IGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP--- 88 (200)
T ss_pred HHHHHhCCcEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC---
Confidence 456678899999996 779999999999987 4667777666211111111 0 0011111 01123333333
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEc
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNS 120 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~ 120 (570)
.-+++.+..+++ .+.. ..+++++|+||-+
T Consensus 89 ----~~~i~~~~~~i~-------~~~~-~~~~~~~DlVi~a 117 (200)
T TIGR02354 89 ----YTEIEAYDEKIT-------EENI-DKFFKDADIVCEA 117 (200)
T ss_pred ----CCEEEEeeeeCC-------HhHH-HHHhcCCCEEEEC
Confidence 235666777776 3443 4778899999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=92.46 E-value=2.5 Score=42.97 Aligned_cols=123 Identities=17% Similarity=0.158 Sum_probs=74.3
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--------HHHHHhhhhhHHHHHhhhccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--------FQNEVLAKDLFNVLKEKWGTR 78 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--------l~~~l~~~~~f~~l~~~~~~~ 78 (570)
+.-+++.+|||.|+ |-+|..+++.|...| |++|.+..-..-..+-..| +. .-....+.++|++-+|
T Consensus 14 q~kL~~s~VLIvG~-gGLG~EiaKnLalaG--Vg~itI~D~d~ve~snL~rqf~~~~~dIG-k~Kaea~~~~L~eLNp-- 87 (286)
T cd01491 14 MKKLQKSNVLISGL-GGLGVEIAKNLILAG--VKSVTLHDTKPCSWSDLSSQFYLREEDIG-KNRAEASQARLAELNP-- 87 (286)
T ss_pred HHHHhcCcEEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCCccchhhcccCccCChHHhC-HHHHHHHHHHHHHHCC--
Confidence 34467889999995 779999999999876 5777666544322211111 11 0111233456666554
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+|+.+.+++. + ..+.+.|+|+.+.. +++.... +-++|++. + ..||
T Consensus 88 -----~V~V~~~~~~~~--------~----~~l~~fdvVV~~~~------~~~~~~~--------in~~c~~~-~-ipfI 134 (286)
T cd01491 88 -----YVPVTVSTGPLT--------T----DELLKFQVVVLTDA------SLEDQLK--------INEFCHSP-G-IKFI 134 (286)
T ss_pred -----CCEEEEEeccCC--------H----HHHhcCCEEEEecC------CHHHHHH--------HHHHHHHc-C-CEEE
Confidence 245666666533 2 34478999998754 2333333 33677775 4 5789
Q ss_pred EEecccccCC
Q 008315 159 HVSTAYVAGE 168 (570)
Q Consensus 159 ~vSTa~v~~~ 168 (570)
+..|...+|.
T Consensus 135 ~a~~~G~~G~ 144 (286)
T cd01491 135 SADTRGLFGS 144 (286)
T ss_pred EEeccccEEE
Confidence 9888777664
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=92.41 E-value=1.8 Score=42.59 Aligned_cols=123 Identities=9% Similarity=0.132 Sum_probs=74.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H-HHHh--h-hhhHHHHHhhhcccccccccCc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---Q-NEVL--A-KDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~-~~l~--~-~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|||.| .|.+|..+++.|...| |.++.++....-..+-..|- . +++- + ...-+++++..| .-+
T Consensus 1 kVlvvG-~GGlG~eilk~La~~G--vg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np-------~v~ 70 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMG--FGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNP-------NCK 70 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCC-------CCE
Confidence 489999 6889999999999876 57888877654333222220 0 0111 1 112345555544 246
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+..+..++++. .+.....++++|+||.+... ...-..+-++|.+. + ..+|+.+|....
T Consensus 71 i~~~~~~i~~~------~~~~~~f~~~~DvVi~a~Dn--------------~~aR~~ln~~c~~~-~-iplI~~g~~G~~ 128 (234)
T cd01484 71 VVPYQNKVGPE------QDFNDTFFEQFHIIVNALDN--------------IIARRYVNGMLIFL-I-VPLIESGTEGFK 128 (234)
T ss_pred EEEEeccCChh------hhchHHHHhCCCEEEECCCC--------------HHHHHHHHHHHHHc-C-CCEEEEcccCCc
Confidence 77788887631 22223567899999987443 22233455667665 3 568888776655
Q ss_pred CC
Q 008315 167 GE 168 (570)
Q Consensus 167 ~~ 168 (570)
|.
T Consensus 129 G~ 130 (234)
T cd01484 129 GN 130 (234)
T ss_pred eE
Confidence 53
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=92.36 E-value=4.2 Score=42.66 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=67.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|+ |.+|..++-.|+..+ -...++++.+.+........ ++.....| ..... +.+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~LiDi~~~~~~g~a~---DL~~~~~~---------------~~~~~-i~~ 96 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQD-LADELALVDVNPDKLRGEML---DLQHAAAF---------------LPRTK-ILA 96 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCCchhhHHHH---HHHhhhhc---------------CCCCE-EEe
Confidence 69999995 999999999888764 34567777775543222111 22221111 12222 222
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+ .+. ..++++|+||-+||..+- .+.-.+.+..|+.-.+.+.+..++.
T Consensus 97 ~----------~dy--~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 97 S----------TDY--AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred C----------CCH--HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 235899999999997542 3445567889999999998888875
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=92.22 E-value=0.37 Score=52.25 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=28.0
Q ss_pred cCCCEEEEECC----------------ccHhHHHHHHHHHHhCCCcc
Q 008315 10 LENKIILVSGV----------------TGFVAKVFIEKILRVQPNVK 40 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V~ 40 (570)
++||+||||+| ||-+|.+|++.+.+.|.+|.
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~Vt 300 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVT 300 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEE
Confidence 68999999985 78999999999999998773
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.31 Score=50.79 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=29.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHH-hCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILR-VQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~-~g~~V~~i~~lvR~ 48 (570)
++.+|.|.||||++|+.|++-|.+ ....|..+.++...
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSK 42 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECc
Confidence 346899999999999999998884 55566666666543
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.4 Score=48.59 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=31.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.++++|+|+|+ |.+|++++..|...| +.+|++..|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g--~~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLG--VAEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcC--CCEEEEEeCCH
Confidence 46899999996 999999999999876 36788998874
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=91.69 E-value=2.5 Score=42.39 Aligned_cols=107 Identities=13% Similarity=0.035 Sum_probs=66.0
Q ss_pred EEEECCccHhHHHHHHHHHHhCC-CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQP-NVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~-~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
|.|.||+|.+|..++..|+..+. .+..|+++.+.+........ ++.... ... ....+..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~---dl~~~~--------------~~~-~~~~i~~-- 60 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAM---DLQDAV--------------EPL-ADIKVSI-- 60 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHH---HHHHhh--------------hhc-cCcEEEE--
Confidence 57999999999999999987651 34577787776533322111 111100 000 0111111
Q ss_pred CCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 94 ISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+ .+. .+.++++|+||-+|+..+.. ..-......|+.-.+.+.+..++.
T Consensus 61 -~--------~d~-~~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 61 -T--------DDP-YEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred -C--------Cch-HHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 121 35568999999999876543 334456788999999998888775
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=91.58 E-value=0.63 Score=43.40 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=28.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++|++|+|.|+++.+|..+++.|.+.|. +|++..|
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~---~V~v~~r 76 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA---TVTVCHS 76 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC---EEEEEEC
Confidence 5899999999977889999999998774 3556555
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.57 E-value=2.4 Score=43.83 Aligned_cols=116 Identities=17% Similarity=0.174 Sum_probs=68.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|+|| |.+|..+...|...+ +..|.++.+.+...... .+. +. +.. ........+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~--~~~l~L~Di~~~~~~g~-~lD--l~-----------~~~---~~~~~~~~i- 62 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKN--LGDVVLYDVIKGVPQGK-ALD--LK-----------HFS---TLVGSNINI- 62 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCC--CCeEEEEECCCccchhH-HHH--Hh-----------hhc---cccCCCeEE-
Confidence 5679999997 999999988887765 24577777765433221 111 10 000 000011111
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceE-EEEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKV-FVHV 160 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~-fV~v 160 (570)
.+ + .+ . +.++++|+||-+|+..+. .....+.+..|..-.+.+.+...+. ..+. ++.+
T Consensus 63 ~~--~--------~d-~-~~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~-~p~a~vivv 121 (319)
T PTZ00117 63 LG--T--------NN-Y-EDIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY-CPNAFVICV 121 (319)
T ss_pred Ee--C--------CC-H-HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 11 1 12 2 255899999999987553 2445667888998888887777765 3344 4444
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.34 E-value=1.5 Score=50.05 Aligned_cols=125 Identities=15% Similarity=0.155 Sum_probs=73.6
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-H---HHHHhhh--h-hHHHHHhhhccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR-F---QNEVLAK--D-LFNVLKEKWGTR 78 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r-l---~~~l~~~--~-~f~~l~~~~~~~ 78 (570)
.++-+++.+|+|.| .|.+|+.+++.|.+.| |.++.+..-..-..+-..| + .+++-+. . .-+++++-+|
T Consensus 37 ~Q~kL~~~~VlIvG-~GGlGs~va~~Lar~G--VG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP-- 111 (679)
T PRK14851 37 EQERLAEAKVAIPG-MGGVGGVHLITMVRTG--IGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINP-- 111 (679)
T ss_pred HHHHHhcCeEEEEC-cCHHHHHHHHHHHHhC--CCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCC--
Confidence 35567899999999 6889999999999987 5677766543322221112 0 0011111 1 1234444444
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+|+.+...++ .++. ..+++++|+||.+.-...+ + .-..+.+.|.+. ++ .+|
T Consensus 112 -----~~~I~~~~~~i~-------~~n~-~~~l~~~DvVid~~D~~~~----~--------~r~~l~~~c~~~-~i-P~i 164 (679)
T PRK14851 112 -----FLEITPFPAGIN-------ADNM-DAFLDGVDVVLDGLDFFQF----E--------IRRTLFNMAREK-GI-PVI 164 (679)
T ss_pred -----CCeEEEEecCCC-------hHHH-HHHHhCCCEEEECCCCCcH----H--------HHHHHHHHHHHC-CC-CEE
Confidence 256788888877 4453 4778999999977643221 1 112345667775 43 466
Q ss_pred EEec
Q 008315 159 HVST 162 (570)
Q Consensus 159 ~vST 162 (570)
+.+.
T Consensus 165 ~~g~ 168 (679)
T PRK14851 165 TAGP 168 (679)
T ss_pred Eeec
Confidence 6554
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.59 Score=48.95 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=29.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
-+|+.|||.||+|-+|+..+.-....+ . ..++.+++++..
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~--~-~~v~t~~s~e~~ 195 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAG--A-IKVVTACSKEKL 195 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcC--C-cEEEEEcccchH
Confidence 368899999999999999997776655 2 234566665544
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=91.00 E-value=2.3 Score=43.70 Aligned_cols=122 Identities=14% Similarity=0.147 Sum_probs=72.2
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHh---hhhhHHHHHhhhcccccccccCc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVL---AKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~---~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|||.|+ |.+|..+++.|...| |++|.++....-..+-..|- .+++- ....-+++++-.| .-+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~G--vg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp-------~v~ 70 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTG--FGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP-------NVK 70 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhc--CCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC-------CCe
Confidence 5899995 889999999999887 57887776544332211110 00111 1122345555444 246
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
++.+.+++++. +.....+++.|+|+.+... .+. -..+-++|... + ..||...|.+..
T Consensus 71 V~~~~~~i~~~-------~~~~~f~~~~DvVv~a~Dn------~~a--------r~~in~~c~~~-~-ip~I~~gt~G~~ 127 (312)
T cd01489 71 IVAYHANIKDP-------DFNVEFFKQFDLVFNALDN------LAA--------RRHVNKMCLAA-D-VPLIESGTTGFL 127 (312)
T ss_pred EEEEeccCCCc-------cchHHHHhcCCEEEECCCC------HHH--------HHHHHHHHHHC-C-CCEEEEecCcce
Confidence 77788888742 2123567899999987543 221 22344566665 3 568888777665
Q ss_pred CC
Q 008315 167 GE 168 (570)
Q Consensus 167 ~~ 168 (570)
|.
T Consensus 128 G~ 129 (312)
T cd01489 128 GQ 129 (312)
T ss_pred eE
Confidence 54
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.74 Score=41.78 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=30.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.++++|+|+|+ |.+|..+++.|.+.| ...|++..|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g--~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELG--AAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEcCCH
Confidence 46799999996 999999999999875 35667777753
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=90.75 E-value=7 Score=40.21 Aligned_cols=114 Identities=15% Similarity=0.100 Sum_probs=69.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|+ |.+|..++..|+..|. +..|.++.|.+..... ... ++.... + + ........+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~-~~ev~l~D~~~~~~~g--~a~-dl~~~~---------~-----~-~~~~~i~~~ 60 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGL-ASEIVLVDINKAKAEG--EAM-DLAHGT---------P-----F-VKPVRIYAG 60 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC-CCEEEEEECCchhhhh--HHH-HHHccc---------c-----c-cCCeEEeeC
Confidence 47999997 9999999999998774 3466777776433211 111 111110 0 0 111222211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
+. ..++++|+||-+|+... ......+....|+.-.+.+.+..++. +.+.++.+-
T Consensus 61 ------------d~--~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~-~~~giiiv~ 115 (308)
T cd05292 61 ------------DY--ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY-APDAILLVV 115 (308)
T ss_pred ------------CH--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 21 33589999999999753 23445566888999998888887775 334444443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=90.73 E-value=0.81 Score=45.81 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=25.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
++|.|+|++|.+|+.+++.+.+ .+++.-+.+..+.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~-~~~~elvav~d~~ 36 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA-AEDLELVAAVDRP 36 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEecC
Confidence 5899999999999999977765 3555444444443
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=90.62 E-value=2.5 Score=50.49 Aligned_cols=124 Identities=13% Similarity=0.122 Sum_probs=71.8
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--------HHHHHhhhhhHHHHHhhhccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--------FQNEVLAKDLFNVLKEKWGTR 78 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--------l~~~l~~~~~f~~l~~~~~~~ 78 (570)
+.-++..+|||.|+ |.+|..+++.|...| |++|.+..-..-..+-..| +. .-....+-++|++-+|
T Consensus 19 q~kL~~s~VLIiG~-gGLG~EiaKnL~laG--Vg~iti~D~d~v~~sdL~rQf~~~~~dIG-k~Kaea~~~~L~eLNp-- 92 (1008)
T TIGR01408 19 MQKMAKSNVLISGM-GGLGLEIAKNLVLAG--VKSVTLHDTEKCQAWDLSSNFFLSEDDVG-RNRAEAVVKKLAELNP-- 92 (1008)
T ss_pred HHHHhhCcEEEECC-CHHHHHHHHHHHHcC--CCeEEEEeCCeecHhhCCCceecchHHcC-chHHHHHHHHHHHHCC--
Confidence 34467789999996 669999999999876 6777776543321111100 00 0011122345555544
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.-+|+++.++++ +.++++.|+|+-+.. ++...+. +-++|++......||
T Consensus 93 -----~V~V~~~~~~l~------------~e~l~~fdvVV~t~~------~~~~~~~--------in~~cr~~~~~I~fI 141 (1008)
T TIGR01408 93 -----YVHVSSSSVPFN------------EEFLDKFQCVVLTEM------SLPLQKE--------INDFCHSQCPPIAFI 141 (1008)
T ss_pred -----CceEEEecccCC------------HHHHcCCCEEEECCC------CHHHHHH--------HHHHHHHcCCCeEEE
Confidence 234666665554 135689999998632 3444333 447787762223588
Q ss_pred EEecccccC
Q 008315 159 HVSTAYVAG 167 (570)
Q Consensus 159 ~vSTa~v~~ 167 (570)
+.++.+.+|
T Consensus 142 ~~~~~G~~G 150 (1008)
T TIGR01408 142 SADVRGLFG 150 (1008)
T ss_pred EEeecceEE
Confidence 877765554
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=90.21 E-value=3.9 Score=35.01 Aligned_cols=70 Identities=14% Similarity=0.259 Sum_probs=43.8
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|+|.|. |-+|..+++.|.+.+ ..+.++.+.+.. .+.+. ...+.++.||.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~---~~vvvid~d~~~---~~~~~------------------------~~~~~~i~gd~ 49 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG---IDVVVIDRDPER---VEELR------------------------EEGVEVIYGDA 49 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT---SEEEEEESSHHH---HHHHH------------------------HTTSEEEES-T
T ss_pred eEEEcC-CHHHHHHHHHHHhCC---CEEEEEECCcHH---HHHHH------------------------hcccccccccc
Confidence 678885 789999999999965 345566654321 11111 14478999999
Q ss_pred CCCCCCCChhhhHHH-HhCCccEEEEcCc
Q 008315 95 SSEDLGLKDSNLKEE-LWNELDVMVNSAA 122 (570)
Q Consensus 95 ~~~~lgls~~~~~~~-l~~~vdiVih~Aa 122 (570)
++ .+.+++ -+++++.|+-+..
T Consensus 50 ~~-------~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 50 TD-------PEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp TS-------HHHHHHTTGGCESEEEEESS
T ss_pred hh-------hhHHhhcCccccCEEEEccC
Confidence 94 443333 3567888886544
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=89.99 E-value=0.36 Score=50.59 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=30.2
Q ss_pred CEEEEECCccHhHHHHHHHHH-HhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll-~~g~~V~~i~~lvR~~ 49 (570)
++|.|.||||-+|+.+++.|. ++...+..++++.-++
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~ 38 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ 38 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh
Confidence 479999999999999999999 6666767777776543
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=89.86 E-value=5.1 Score=37.50 Aligned_cols=121 Identities=21% Similarity=0.133 Sum_probs=67.1
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH---HHHHHhh---hhhHHHHHhhhcccccccccCce
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR---FQNEVLA---KDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r---l~~~l~~---~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+|+|.| .|-+|..+++.|.+.| |.++.+.....-..+-..| ..+++-+ ...-.++++-.| .-++
T Consensus 1 ~VlViG-~GglGs~ia~~La~~G--vg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp-------~v~i 70 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSG--VGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-------FVKI 70 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcC--CCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC-------CCEE
Confidence 489999 5889999999999976 5677777765522111111 0011111 111233444333 2456
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
+.+...++ .++ .+.+++++|+||.|... .+ .-..+.+.|.+..+ ..||+.+..+-++
T Consensus 71 ~~~~~~~~-------~~~-~~~~l~~~DlVi~~~d~------~~--------~r~~i~~~~~~~~~-ip~i~~~~~~~~~ 127 (174)
T cd01487 71 EAINIKID-------ENN-LEGLFGDCDIVVEAFDN------AE--------TKAMLAESLLGNKN-KPVVCASGMAGFG 127 (174)
T ss_pred EEEEeecC-------hhh-HHHHhcCCCEEEECCCC------HH--------HHHHHHHHHHHHCC-CCEEEEehhhccC
Confidence 66766665 333 34677899999988433 11 11234555555423 5677765444444
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.76 E-value=1.9 Score=44.01 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=31.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.++++|+|.|| |..+++++..|...| +++|+++.|+..
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g--~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC--CCEEEEEeCCcc
Confidence 46899999996 556999999998765 478999999864
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=89.65 E-value=4.3 Score=41.62 Aligned_cols=106 Identities=17% Similarity=0.133 Sum_probs=62.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..+...+.. .|++..+.+...... .. ++. +... . . ..... +.+
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~--ev~L~D~~~~~~~~~--~~-dl~-----~~~~---~----~--~~~~~-i~~ 61 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELG--DVVLFDIVEGVPQGK--AL-DIA-----EAAP---V----E--GFDTK-ITG 61 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCe--EEEEEECCCchhHHH--HH-HHH-----hhhh---h----c--CCCcE-EEe
Confidence 68999998 99999999988876542 567777744322111 10 111 1000 0 0 00111 111
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
..+. ..++++|+||-+++... ......+.+..|+.-.+.+++...+.
T Consensus 62 ----------~~d~--~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 62 ----------TNDY--EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred ----------CCCH--HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 23589999999998653 33445566788888888888877664
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.20 E-value=1.1 Score=45.41 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=26.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPN 38 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~ 38 (570)
++||+|+|.|++|.+|+.++..|++.|..
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gat 185 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANAT 185 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCE
Confidence 47999999999999999999999988753
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.06 E-value=3.2 Score=48.84 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=76.2
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-H---HHHHhhh---hhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR-F---QNEVLAK---DLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r-l---~~~l~~~---~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.| .|.+|+.+++.|.+.| |.+|.++.-..-..+-..| + .+++-+. ..-+++++-+|
T Consensus 327 Q~kL~~srVlVvG-lGGlGs~ia~~LAraG--VG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP--- 400 (989)
T PRK14852 327 QRRLLRSRVAIAG-LGGVGGIHLMTLARTG--IGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNP--- 400 (989)
T ss_pred HHHHhcCcEEEEC-CcHHHHHHHHHHHHcC--CCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCC---
Confidence 4567889999999 6789999999999987 5777776544322222222 0 0011111 11234444444
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+|+.+...++ .+. .+.+++++|+||.|.-...++ ..+.+.+.|.+. + ..+|+
T Consensus 401 ----~v~I~~~~~~I~-------~en-~~~fl~~~DiVVDa~D~~~~~------------~rr~l~~~c~~~-~-IP~I~ 454 (989)
T PRK14852 401 ----FLDIRSFPEGVA-------AET-IDAFLKDVDLLVDGIDFFALD------------IRRRLFNRALEL-G-IPVIT 454 (989)
T ss_pred ----CCeEEEEecCCC-------HHH-HHHHhhCCCEEEECCCCccHH------------HHHHHHHHHHHc-C-CCEEE
Confidence 246777777776 444 357789999999775442211 123455567665 4 45777
Q ss_pred EecccccC
Q 008315 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 455 ag~~G~~g 462 (989)
T PRK14852 455 AGPLGYSC 462 (989)
T ss_pred eeccccCe
Confidence 77654443
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=88.97 E-value=1.4 Score=47.30 Aligned_cols=37 Identities=22% Similarity=0.479 Sum_probs=31.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++|++|+|.|+ |-+|+.++..|...|. ..|++..|+.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~--~~I~V~nRt~ 215 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAP--KQIMLANRTI 215 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 57899999995 9999999999998764 6789999974
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=88.91 E-value=2.6 Score=36.69 Aligned_cols=30 Identities=20% Similarity=0.490 Sum_probs=23.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEE
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLL 45 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l 45 (570)
+|.|+|++|.+|+.+++.|... +++. ++.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~-l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFE-VVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCce-EEEE
Confidence 4789999999999999988874 3443 4444
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=88.85 E-value=0.88 Score=46.58 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=30.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.+.+|+|+||+|.+|.++++.+...|. +|++++|+.
T Consensus 161 ~~~~~vlI~ga~g~vG~~~~~~a~~~g~---~v~~~~~~~ 197 (332)
T cd08259 161 KKGDTVLVTGAGGGVGIHAIQLAKALGA---RVIAVTRSP 197 (332)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEeCCH
Confidence 3578999999999999999999998884 457777654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.62 E-value=3.9 Score=43.17 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=32.9
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
+++-+++++|+|.| .|.+|+.+++.|.+.| |.+|.++--.
T Consensus 170 ~q~kL~~~~VaIVG-~GG~GS~Va~~LAR~G--VgeI~LVD~D 209 (393)
T PRK06153 170 LSAKLEGQRIAIIG-LGGTGSYILDLVAKTP--VREIHLFDGD 209 (393)
T ss_pred HHHHHhhCcEEEEc-CCccHHHHHHHHHHcC--CCEEEEECCC
Confidence 36677899999999 5779999999999986 6788776543
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=88.46 E-value=3 Score=45.19 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=49.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|+|.|+ |.+|+.+++.|.+.|.+| +++.++.. ..+++. ++ ...+..+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v---~vid~~~~---~~~~~~-------------~~---------~~~~~~i 280 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSV---KLIERDPE---RAEELA-------------EE---------LPNTLVL 280 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeE---EEEECCHH---HHHHHH-------------HH---------CCCCeEE
Confidence 4689999996 999999999999888654 45544321 111221 11 1356789
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
.||.++ .+.+.+.-+++++.||-+..
T Consensus 281 ~gd~~~------~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 281 HGDGTD------QELLEEEGIDEADAFIALTN 306 (453)
T ss_pred ECCCCC------HHHHHhcCCccCCEEEECCC
Confidence 999985 23333344568898885433
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.27 E-value=0.47 Score=48.59 Aligned_cols=35 Identities=6% Similarity=0.093 Sum_probs=30.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
-.+|.| ||||-+|+.+++-|-++...+++++++.-
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s 37 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEI 37 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeeccc
Confidence 357999 99999999999999888888888877754
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.11 E-value=5.4 Score=41.32 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=68.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|.| +|.+|..++..++..|. ..|+++.+++.... .+.+. +.. .. ........+.
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl--~~i~LvDi~~~~~~-~~~ld--~~~--------~~------~~~~~~~~I~ 64 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNL--GDVVLFDIVKNIPQ-GKALD--ISH--------SN------VIAGSNSKVI 64 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCC--CeEEEEeCCCchhh-HHHHH--HHh--------hh------hccCCCeEEE
Confidence 457999999 59999999998887664 34777777655432 12221 111 00 0000111222
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-cc-----CHHHHHHHHHHHHHHHHHHHHHccCce-EEEEEe
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DE-----RYDVAFGINTLGAIHLVNFAKKCVKLK-VFVHVS 161 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~lk-~fV~vS 161 (570)
. - .++ +.++++|+||.+|+..+- .. +..+.+..|+.-.+.+.+...+. ..+ .++.+|
T Consensus 65 ~-~----------~d~--~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~-~p~a~~iv~s 128 (321)
T PTZ00082 65 G-T----------NNY--EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY-CPNAFVIVIT 128 (321)
T ss_pred E-C----------CCH--HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEec
Confidence 1 0 122 244899999999987432 12 55667888998888888877775 333 344444
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.08 E-value=0.88 Score=46.89 Aligned_cols=39 Identities=13% Similarity=0.307 Sum_probs=29.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
.+|+|.||||+.|..|++.|.. -|+|..+.+-.|...++
T Consensus 3 ~kV~IvGasGYtG~EL~rlL~~-Hp~ve~~~~ss~~~~g~ 41 (349)
T COG0002 3 IKVGIVGASGYTGLELLRLLAG-HPDVELILISSRERAGK 41 (349)
T ss_pred ceEEEEcCCCCcHHHHHHHHhc-CCCeEEEEeechhhcCC
Confidence 5899999999999999988886 58887443333433443
|
|
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=87.69 E-value=5.6 Score=42.81 Aligned_cols=130 Identities=8% Similarity=0.050 Sum_probs=73.1
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH---H-HHHhh---hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF---Q-NEVLA---KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl---~-~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-+.+.+|+|.|++| +|..+++.|...| |.++.++.-..-..+-..+- . +++-+ ..+-+.|++-.|
T Consensus 15 Q~~L~~s~VlliG~gg-lGsEilKNLvL~G--Ig~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp--- 88 (425)
T cd01493 15 QAALESAHVCLLNATA-TGTEILKNLVLPG--IGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNP--- 88 (425)
T ss_pred HHHHhhCeEEEEcCcH-HHHHHHHHHHHcC--CCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCC---
Confidence 4456788999999765 9999999999865 77887775443221111110 0 01100 112334554443
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++++..++.+- .+....++.+.|+||-+.. +... ...+.++|.+. + ..||+
T Consensus 89 ----~V~i~~~~e~~~~l------l~~~~~f~~~fdiVI~t~~------~~~~--------~~~L~~~c~~~-~-iPlI~ 142 (425)
T cd01493 89 ----DVNGSAVEESPEAL------LDNDPSFFSQFTVVIATNL------PEST--------LLRLADVLWSA-N-IPLLY 142 (425)
T ss_pred ----CCEEEEEecccchh------hhhHHHHhcCCCEEEECCC------CHHH--------HHHHHHHHHHc-C-CCEEE
Confidence 13455665554420 1111356788999984321 1222 12355777775 4 57999
Q ss_pred EecccccCC
Q 008315 160 VSTAYVAGE 168 (570)
Q Consensus 160 vSTa~v~~~ 168 (570)
++|.+.+|.
T Consensus 143 ~~s~G~~G~ 151 (425)
T cd01493 143 VRSYGLYGY 151 (425)
T ss_pred EecccCEEE
Confidence 999888874
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=87.62 E-value=5 Score=39.41 Aligned_cols=123 Identities=16% Similarity=0.264 Sum_probs=67.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-HHH---HHhhh--hhH-HHHHhhhccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR-FQN---EVLAK--DLF-NVLKEKWGTRLNSF 82 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r-l~~---~l~~~--~~f-~~l~~~~~~~~~~~ 82 (570)
+++.+|+|.|. |.+|++.+|.|.|+| |.+|.++.-..-..+-..| +.. .+-+. .++ ++++.-.|
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsG--ig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP------ 98 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSG--IGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINP------ 98 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcC--CCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCC------
Confidence 46789999995 779999999999987 4666555432211111111 110 11111 111 23333333
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
..+|..+.-=++ .+...+-+..+.|.||.+--. +..-..|+..|.+. ++ -.+||
T Consensus 99 -~c~V~~~~~f~t-------~en~~~~~~~~~DyvIDaiD~--------------v~~Kv~Li~~c~~~-ki---~vIss 152 (263)
T COG1179 99 -ECEVTAINDFIT-------EENLEDLLSKGFDYVIDAIDS--------------VRAKVALIAYCRRN-KI---PVISS 152 (263)
T ss_pred -CceEeehHhhhC-------HhHHHHHhcCCCCEEEEchhh--------------hHHHHHHHHHHHHc-CC---CEEee
Confidence 134444444444 344433344579999986433 34445688889887 33 34566
Q ss_pred ccccC
Q 008315 163 AYVAG 167 (570)
Q Consensus 163 a~v~~ 167 (570)
..+-+
T Consensus 153 ~Gag~ 157 (263)
T COG1179 153 MGAGG 157 (263)
T ss_pred ccccC
Confidence 65544
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=87.57 E-value=9.4 Score=33.88 Aligned_cols=89 Identities=24% Similarity=0.379 Sum_probs=51.4
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHh-------hhhhHHHHHhhhcccccccccCce
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVL-------AKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~-------~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
|.|.|+||-||+.-++-+.+ .++--+|+.|.-.++-....+..+ +.. +...++.+++..+.. ...+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~-~~d~f~v~~Lsa~~n~~~L~~q~~-~f~p~~v~i~~~~~~~~l~~~~~~~-----~~~~ 73 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRK-HPDKFEVVALSAGSNIEKLAEQAR-EFKPKYVVIADEEAYEELKKALPSK-----GPGI 73 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHH-CTTTEEEEEEEESSTHHHHHHHHH-HHT-SEEEESSHHHHHHHHHHHHHT-----TSSS
T ss_pred CEEEcCCcHHHHHHHHHHHh-CCCceEEEEEEcCCCHHHHHHHHH-HhCCCEEEEcCHHHHHHHHHHhhhc-----CCCC
Confidence 67999999999998876655 566567888887555433332222 221 112355566554311 2356
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcC
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSA 121 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~A 121 (570)
++..|+ +... ++.+ ++|+|++..
T Consensus 74 ~v~~G~----------~~l~-~~~~~~~~D~vv~Ai 98 (129)
T PF02670_consen 74 EVLSGP----------EGLE-ELAEEPEVDIVVNAI 98 (129)
T ss_dssp EEEESH----------HHHH-HHHTHTT-SEEEE--
T ss_pred EEEeCh----------HHHH-HHhcCCCCCEEEEeC
Confidence 677664 3333 4444 799998653
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.38 E-value=1.9 Score=43.68 Aligned_cols=30 Identities=27% Similarity=0.330 Sum_probs=27.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+|+|.|+++.+|+-++..|++.|..|
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatV 185 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASV 185 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 589999999999999999999999887554
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=87.08 E-value=1.1 Score=47.07 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=26.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEec
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~ 48 (570)
.+|.|.||||++|+.|++.|++. ...+..++.+..+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 47999999999999999977764 3344556665543
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=87.01 E-value=2.8 Score=45.73 Aligned_cols=93 Identities=15% Similarity=0.219 Sum_probs=57.1
Q ss_pred chhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH--HHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA--ALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~--~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
....|+.+++|+|.| .|-.|..+++.|.+.|+.| .+..+.+..... .+++.
T Consensus 7 ~~~~~~~~~~i~v~G-~G~sG~a~a~~L~~~G~~V---~~~D~~~~~~~~~~~~~l~----------------------- 59 (458)
T PRK01710 7 EFKKFIKNKKVAVVG-IGVSNIPLIKFLVKLGAKV---TAFDKKSEEELGEVSNELK----------------------- 59 (458)
T ss_pred HHhhhhcCCeEEEEc-ccHHHHHHHHHHHHCCCEE---EEECCCCCccchHHHHHHH-----------------------
Confidence 456678899999999 5779999999999999754 455544322211 11121
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHH
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGIN 137 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~N 137 (570)
..++.++.++-. . ..+.+.|.||.+.|....+..+..+.+.+
T Consensus 60 -~~gi~~~~~~~~-----------~-~~~~~~dlVV~Spgi~~~~p~~~~a~~~~ 101 (458)
T PRK01710 60 -ELGVKLVLGENY-----------L-DKLDGFDVIFKTPSMRIDSPELVKAKEEG 101 (458)
T ss_pred -hCCCEEEeCCCC-----------h-HHhccCCEEEECCCCCCCchHHHHHHHcC
Confidence 134566655422 1 22267899999988764444444444433
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=87.00 E-value=2.4 Score=47.03 Aligned_cols=90 Identities=18% Similarity=0.276 Sum_probs=56.8
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.|+..+|+|.| +|-+|+.|+..|++.|. ..|.+++=..- .+-..|+. ++.+ +.++ +.+.+.
T Consensus 126 ~qR~akVlVlG-~Gg~~s~lv~sL~~sG~--~~I~~vd~D~v-~SNlnRIg-El~e------~A~~--------~n~~v~ 186 (637)
T TIGR03693 126 LSRNAKILAAG-SGDFLTKLVRSLIDSGF--PRFHAIVTDAE-EHALDRIH-ELAE------IAEE--------TDDALL 186 (637)
T ss_pred hhhcccEEEEe-cCchHHHHHHHHHhcCC--CcEEEEecccc-chhhhHHH-HHHH------HHHH--------hCCCCc
Confidence 35789999999 56679999999999885 56666654443 44444444 2211 1111 123444
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v 124 (570)
+-..|.+. ++++. .++++.|+|++.+...
T Consensus 187 v~~i~~~~------~~dl~-ev~~~~DiVi~vsDdy 215 (637)
T TIGR03693 187 VQEIDFAE------DQHLH-EAFEPADWVLYVSDNG 215 (637)
T ss_pred eEeccCCc------chhHH-HhhcCCcEEEEECCCC
Confidence 44444432 55654 8889999999987753
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=86.66 E-value=1.8 Score=44.54 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=27.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++|.|.| +|++|..++..|++.|++| .+..|++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V---~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEV---RLWDADP 35 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCee---EEEeCCH
Confidence 4799999 8999999999999999754 6777764
|
|
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=86.65 E-value=2.5 Score=47.34 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=31.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+-+++.+|||.|+ |.+|..+++.|++.| |++|.++....
T Consensus 334 ekL~~~kVLIvGa-GGLGs~VA~~La~~G--Vg~ItlVD~D~ 372 (664)
T TIGR01381 334 ERYSQLKVLLLGA-GTLGCNVARCLIGWG--VRHITFVDNGK 372 (664)
T ss_pred HHHhcCeEEEECC-cHHHHHHHHHHHHcC--CCeEEEEcCCE
Confidence 4567899999995 889999999999866 68888776543
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=86.34 E-value=2.5 Score=43.09 Aligned_cols=36 Identities=11% Similarity=0.284 Sum_probs=30.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+.|++|+|.|+ |.+|+.+++.|...|. +|++..|+.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~---~V~v~~R~~ 184 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA---RVFVGARSS 184 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 46899999995 8899999999998874 567777764
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=86.13 E-value=14 Score=37.75 Aligned_cols=109 Identities=16% Similarity=0.110 Sum_probs=67.0
Q ss_pred EECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccCCC
Q 008315 17 VSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDISS 96 (570)
Q Consensus 17 ITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~ 96 (570)
|.| +|.+|..++-.|+..+ -+..+.++.+.+........ ++.....| ....+.+..+|
T Consensus 1 iIG-aG~VG~~~a~~l~~~~-l~~el~L~Di~~~~~~g~a~---Dl~~~~~~--------------~~~~~~i~~~~--- 58 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQG-IADEIVLIDINKDKAEGEAM---DLQHAASF--------------LPTPKKIRSGD--- 58 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcC-CCCEEEEEeCCCChhhHHHH---HHHHhhcc--------------cCCCeEEecCC---
Confidence 356 5999999999888764 34678788775433222111 22221111 11223332221
Q ss_pred CCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 97 EDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 97 ~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
. ..++++|+||-+||..+- ...-.+.+..|+.-.+.+.+...+. +.+.++.
T Consensus 59 ---------~--~~~~daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~-~p~~~vi 110 (299)
T TIGR01771 59 ---------Y--SDCKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS-GFDGIFL 110 (299)
T ss_pred ---------H--HHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEE
Confidence 1 445899999999997543 3445677899999999999988876 4444433
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=85.96 E-value=4.3 Score=38.08 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=31.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
..|++|.|.| .|-||+.+++.|..-|. +|+...|..+.
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~---~V~~~d~~~~~ 71 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGM---RVIGYDRSPKP 71 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT----EEEEEESSCHH
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCc---eeEEecccCCh
Confidence 4799999999 79999999999998774 56777777653
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=85.89 E-value=16 Score=37.37 Aligned_cols=112 Identities=16% Similarity=0.108 Sum_probs=67.1
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|.|.|+ |.+|..++..|+..+ -+..++++.+.+........ ++.... .. ........+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~-~~~el~l~D~~~~~~~g~~~---DL~~~~--------------~~-~~~~~i~~~-- 58 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKG-LASELVLVDVNEEKAKGDAL---DLSHAS--------------AF-LATGTIVRG-- 58 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeCCccHHHHHHH---hHHHhc--------------cc-cCCCeEEEC--
Confidence 467885 889999999888764 34567777775433222111 221111 00 012222221
Q ss_pred CCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 95 SSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
. + . ..++++|+||-+|+..+- .+...+.+..|+.-.+.+.+..++. +.+.+|.+
T Consensus 59 ~---------~-~-~~l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~-~p~~~viv 113 (300)
T cd00300 59 G---------D-Y-ADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY-GPDAIILV 113 (300)
T ss_pred C---------C-H-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 1 355899999999997542 3445666889999999999988876 34444433
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=85.82 E-value=2 Score=39.65 Aligned_cols=30 Identities=30% Similarity=0.389 Sum_probs=24.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+|+|.|.++.+|+-|...|++++..|
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atV 63 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATV 63 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EE
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeE
Confidence 579999999999999999999999987544
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=85.53 E-value=1.7 Score=44.56 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=29.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.|.+|||+||+|-+|..+++.+...|. +|++..++.
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~---~vi~~~~s~ 178 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGC---KVIGCAGSD 178 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 3578999999999999999888877774 467777654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=85.18 E-value=1.2 Score=46.33 Aligned_cols=26 Identities=23% Similarity=0.296 Sum_probs=23.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQP 37 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~ 37 (570)
|.+|||+||||-+|...++-+...|.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~ 168 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGA 168 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC
Confidence 79999999999999999988888775
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.15 E-value=5.1 Score=38.52 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=28.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++|++|+|.|| |=+|...++.|++.|.+| .++.+
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V---~VIs~ 41 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHI---VVISP 41 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeE---EEEcC
Confidence 58999999996 999999999999988544 45543
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=85.15 E-value=1.9 Score=43.45 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=29.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++++++|+|+ |.+|++++..|.+.|. +|++..|+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~---~v~v~~R~~ 150 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADC---NVIIANRTV 150 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4789999997 8999999999998774 567777754
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=85.11 E-value=3.2 Score=42.21 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=31.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.++++|+|.|+ |..|++++..|...| +++|+++.|+.
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G--~~~I~I~nR~~ 161 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLG--VERLTIFDVDP 161 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcC--CCEEEEECCCH
Confidence 36789999995 779999999999876 57889998875
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=85.09 E-value=12 Score=38.55 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=62.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|-|.|+ |.+|..++..|+..|.. .|+++.+.+..... +.. ++.... + . .....++. ..+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~--~VvlvDi~~~l~~g--~a~-d~~~~~---------~--~-~~~~~~i~-~t~ 62 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELA--DLVLLDVVEGIPQG--KAL-DMYEAS---------P--V-GGFDTKVT-GTN 62 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCC--eEEEEeCCCChhHH--HHH-hhhhhh---------h--c-cCCCcEEE-ecC
Confidence 57999995 99999999999887752 46666664332111 111 111100 0 0 00001111 112
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++ +. ++++|+||-+|+..+- +++-.+.+..|+.-.+.+++...+.
T Consensus 63 ------------d~-~~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 63 ------------NY-AD-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred ------------CH-HH-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 23 4789999999997543 3344566888999999988877665
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.02 E-value=2.7 Score=41.13 Aligned_cols=74 Identities=27% Similarity=0.417 Sum_probs=49.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++|.| .|-+|..+++.|.+.|++| .++.+.+. +.. +..+ . ......+.|
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~V---v~Id~d~~------~~~-~~~~--------~----------~~~~~~v~g 51 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNV---VLIDRDEE------RVE-EFLA--------D----------ELDTHVVIG 51 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCce---EEEEcCHH------HHH-HHhh--------h----------hcceEEEEe
Confidence 5788888 5899999999999999876 34454432 111 0000 0 134688999
Q ss_pred cCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 93 DISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
|-+ +++.++++ ++++|+++-+.+
T Consensus 52 d~t-------~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 52 DAT-------DEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred cCC-------CHHHHHhcCCCcCCEEEEeeC
Confidence 999 45555555 678999985443
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=85.01 E-value=3.1 Score=42.41 Aligned_cols=100 Identities=22% Similarity=0.195 Sum_probs=55.1
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH-----HHH----HHhhhhhHHHHHhhhccccccccc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR-----FQN----EVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r-----l~~----~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+|||.| .|-+|..+++.|.+.| |++|.++....-..+-..| ..+ .-.....-++|++-+| .
T Consensus 1 kVLIvG-aGGLGs~vA~~La~aG--Vg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP-------~ 70 (307)
T cd01486 1 KCLLLG-AGTLGCNVARNLLGWG--VRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFP-------S 70 (307)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCC-------C
Confidence 589999 5789999999999876 6788776543322111111 000 0001122345565554 2
Q ss_pred CceEEEEccCCCCCCCC---------ChhhhHHHHhCCccEEEEcCcc
Q 008315 85 EKITFVAGDISSEDLGL---------KDSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgl---------s~~~~~~~l~~~vdiVih~Aa~ 123 (570)
-+++.+...+.-|+.-+ .+.+..++++++.|+||.+.-.
T Consensus 71 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~d~tDn 118 (307)
T cd01486 71 IDATGIVLSIPMPGHPISESEVPSTLKDVKRLEELIKDHDVIFLLTDS 118 (307)
T ss_pred cEEEEeeeeccccccccccccccccccCHHHHHHHHhhCCEEEECCCC
Confidence 34555554442221111 1233346888999999988644
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=84.52 E-value=2.1 Score=38.26 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=58.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|++.| +| -|..+++.|.+.|.+| .++..++. +.+..+ ...+.++
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~~V---iaIDi~~~---aV~~a~------------------------~~~~~~v 63 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGFDV---IVIDINEK---AVEKAK------------------------KLGLNAF 63 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCCEE---EEEECCHH---HHHHHH------------------------HhCCeEE
Confidence 357899999 67 6888899999888755 45544432 111111 1357899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
.+|+.+|++ .+-+++|.|+-+=-+ . + -...++++|++. +..-+
T Consensus 64 ~dDlf~p~~---------~~y~~a~liysirpp------~-e-------l~~~~~~la~~~-~~~~~ 106 (134)
T PRK04148 64 VDDLFNPNL---------EIYKNAKLIYSIRPP------R-D-------LQPFILELAKKI-NVPLI 106 (134)
T ss_pred ECcCCCCCH---------HHHhcCCEEEEeCCC------H-H-------HHHHHHHHHHHc-CCCEE
Confidence 999997632 455889999864221 1 2 124588899987 54433
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.22 E-value=8.2 Score=38.40 Aligned_cols=39 Identities=18% Similarity=0.360 Sum_probs=31.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.++|.|.||+|=+|+.+++.+.+. +++.-+-++.|+++.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~-~~~~L~aa~~~~~~~ 40 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEA-PDLELVAAFDRPGSL 40 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcC-CCceEEEEEecCCcc
Confidence 368999999999999999999875 577667777887653
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=84.12 E-value=1.4 Score=46.06 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=24.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++|.|+||||++|+.|++.|.+. +.+. +..+++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~~-l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYFE-LAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCce-EEEEEE
Confidence 47999999999999999977664 5553 334433
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=84.11 E-value=1.6 Score=42.42 Aligned_cols=34 Identities=21% Similarity=0.139 Sum_probs=28.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
|+|.|.||+|.+|+.++..|.+.|++| .+..|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V---~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKI---IIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEE---EEEEcCH
Confidence 479999999999999999999998654 5566653
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >KOG1496 consensus Malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.95 E-value=10 Score=37.10 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=66.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHh---CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV---QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~---g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
-+|+||||+|.||-+|+-.+.+- |++=--+..|.-...-....+-+.=|+.++ .|..|++-
T Consensus 5 irVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~-a~PlL~~V--------------- 68 (332)
T KOG1496|consen 5 IRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDC-ALPLLKGV--------------- 68 (332)
T ss_pred eEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhh-hhhHHHhh---------------
Confidence 48999999999999999988762 222111122222222222222222122111 12222211
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCccc-CHHHHHHHHHHHHHHHHHHHHHc--cCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDE-RYDVAFGINTLGAIHLVNFAKKC--VKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~-~~~~~~~~Nv~gt~~ll~~a~~~--~~lk~fV~vSTa~v~ 166 (570)
+.+ .+ ....++++|+.|-..|..+-.. .-++.+..||.--+.--.+..+. +++|.+|.---+..+
T Consensus 69 ---vat--------td-~~~afkdv~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTN 136 (332)
T KOG1496|consen 69 ---VAT--------TD-EVEAFKDVDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTN 136 (332)
T ss_pred ---hcc--------cC-hhhhhccCcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccc
Confidence 111 11 2367899999999988766542 23456777876544333333222 477877765555554
Q ss_pred C
Q 008315 167 G 167 (570)
Q Consensus 167 ~ 167 (570)
+
T Consensus 137 a 137 (332)
T KOG1496|consen 137 A 137 (332)
T ss_pred h
Confidence 3
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=83.84 E-value=3 Score=46.08 Aligned_cols=37 Identities=19% Similarity=0.381 Sum_probs=31.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+.+++|+|.|+ |-+|..++..|...| +.+|++..|+.
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G--~~~V~V~nRs~ 300 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKG--CTKMVVVNRSE 300 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCC--CCeEEEEeCCH
Confidence 56899999996 999999999999876 46788888875
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=83.65 E-value=3.1 Score=43.05 Aligned_cols=37 Identities=11% Similarity=0.001 Sum_probs=29.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.|.+|+|+||+|.+|..+++-+...|. +|++.+++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~---~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGC---YVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 3589999999999999999987777774 456777654
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=83.42 E-value=3.1 Score=42.24 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=31.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.++++|+|.|+ |-.|++++..|.+.| +++|+++.|+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G--~~~i~I~nRt~ 159 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLG--VTDITVINRNP 159 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcC--CCeEEEEeCCH
Confidence 46899999995 889999999999876 46889999974
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=83.39 E-value=11 Score=38.58 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=60.6
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEccC
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGDI 94 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gDl 94 (570)
|.|.|| |.+|..++..|...+.. .|+++.+++....... + ++ .+... .......+. .
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~--eV~L~Di~e~~~~g~~-~--dl-----~~~~~---------~~~~~~~I~-~-- 57 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELG--DVVLLDIVEGLPQGKA-L--DI-----SQAAP---------ILGSDTKVT-G-- 57 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCc--EEEEEeCCCcHHHHHH-H--HH-----HHhhh---------hcCCCeEEE-E--
Confidence 568997 99999999988876643 6777777643221111 0 11 11000 000111111 1
Q ss_pred CCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 95 SSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 95 ~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+ .+. ..++++|+||.+|+..+ .+....+.+..|+.-.+.+++...+.
T Consensus 58 t--------~d~--~~l~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 58 T--------NDY--EDIAGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred c--------CCH--HHhCCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112 23589999999998753 33444566788988888888877765
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=83.10 E-value=58 Score=36.47 Aligned_cols=117 Identities=19% Similarity=0.223 Sum_probs=67.7
Q ss_pred hcCCCEEEEECCc-cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVT-GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaT-GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
-|.++..+||||+ |-||..++++||.-|..| ++ .-++-+ .+|.. .+..|...+... ...+
T Consensus 393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtV---I~-TTS~~s---~~r~e-------fyr~LYa~~a~~-----ga~L 453 (866)
T COG4982 393 TYGDKVALVTGASKGSIAAAVVARLLAGGATV---IA-TTSRLS---EERTE-------FYRSLYARHARY-----GAAL 453 (866)
T ss_pred CcccceEEEecCCCcchHHHHHHHHHhCCcEE---EE-Eccccc---HHHHH-------HHHHHHHhhCCC-----CceE
Confidence 4789999999988 999999999999988543 22 222222 22322 344555555421 2456
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC---------------------CccEEEEcCccCCc------ccCHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN---------------------ELDVMVNSAAITKF------DERYDVAFGINTLG 140 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~---------------------~vdiVih~Aa~v~f------~~~~~~~~~~Nv~g 140 (570)
-+|..++.+. .| .+.+++ ..+.+|-.||+--- +..-+...++-...
T Consensus 454 wvVpaN~~Sy------sD-VdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~ 526 (866)
T COG4982 454 WVVPANMGSY------SD-VDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWN 526 (866)
T ss_pred EEEeccccch------hh-HHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHH
Confidence 7777777642 22 122221 25778888886321 12223345555556
Q ss_pred HHHHHHHHHHc
Q 008315 141 AIHLVNFAKKC 151 (570)
Q Consensus 141 t~~ll~~a~~~ 151 (570)
..+++--.++.
T Consensus 527 V~Rliggl~~~ 537 (866)
T COG4982 527 VLRLIGGLKKQ 537 (866)
T ss_pred HHHHHHHhhhh
Confidence 66665554443
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=82.95 E-value=3.3 Score=42.42 Aligned_cols=30 Identities=13% Similarity=0.273 Sum_probs=25.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEE
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYL 44 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~ 44 (570)
+|.|.|||||.|..|++.|.+. |+++-+++
T Consensus 3 ~v~IvGasGy~G~el~rlL~~H-P~~el~~l 32 (310)
T TIGR01851 3 KVFIDGEAGTTGLQIRERLSGR-DDIELLSI 32 (310)
T ss_pred eEEEECCCChhHHHHHHHHhCC-CCeEEEEE
Confidence 7999999999999999988874 77754444
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=82.95 E-value=3.8 Score=41.32 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=31.3
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.-+|++|+|+||+|.+|..+++.+...| .+|+++.+++
T Consensus 142 ~~~g~~vlI~g~~~~~g~~~~~~a~~~g---~~v~~~~~~~ 179 (325)
T cd08253 142 AKAGETVLVHGGSGAVGHAAVQLARWAG---ARVIATASSA 179 (325)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCH
Confidence 3468999999999999999999888877 3567877754
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=82.33 E-value=0.47 Score=55.89 Aligned_cols=126 Identities=20% Similarity=0.368 Sum_probs=92.3
Q ss_pred EEEECCccHhHHHHHHHHHHhCCC--ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPN--VKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~--V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+++||.+|++|+...+.++..... ...+.+++|+.+......|..+.+ .....+.++ ..-++..+.+
T Consensus 721 ~~~~~~~~~l~~~~l~~~~~~~~~~~~i~~~~~~~a~~e~a~~~~~~~~i---~~~~~~~e~--------~~i~~~~~~~ 789 (1032)
T KOG1178|consen 721 VFLTGYTGYLGRRKLSNLVKLSNFFYIILVFALVRASSEEASGGRLQDAI---QIYGVLNEE--------LLINIIVHLI 789 (1032)
T ss_pred eeeeeccceehhhhhhhhhhhhhhhheeeeEEEeccCCchhhccchhchh---hhhhhcccc--------ccceeeeehh
Confidence 899999999999999888775431 234667888777665555544211 122222222 2346778889
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHcc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCV 152 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (570)
++.+...|+.+.-+ +.+.+.++.++|.++.++..-+.......|+.++...+.++...+
T Consensus 790 ~~~~~~~~~~~~l~-~~l~~~~~~~i~~~~~~~~v~~~t~~~~~~~~~~~~~~~l~~~l~ 848 (1032)
T KOG1178|consen 790 DLSKSLFGLEDTLW-NKLQEPVSIVIHNGALVHEVLRYTELRYPNVIGTITVLPLYSFLK 848 (1032)
T ss_pred hhhhhhhcccchhh-hccccCcceecccccceeeechhhccCCceeeeeeeeeeeecccc
Confidence 99999999977765 478889999999999988777777778889999999988887653
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=82.05 E-value=2.8 Score=43.32 Aligned_cols=35 Identities=11% Similarity=0.069 Sum_probs=28.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.+|||+||+|-+|..+++-+...|. .+|++..++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~--~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGC--SRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCC--CEEEEEcCCH
Confidence 8999999999999999887776664 3567777654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=82.04 E-value=3 Score=42.89 Aligned_cols=36 Identities=14% Similarity=0.048 Sum_probs=29.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+||+|-+|..++..+...|. +|++.+++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~---~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 578999999999999999877777664 467777654
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=81.82 E-value=5.4 Score=40.79 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=28.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.+++|+|.|+ |-+|+.++..|.+.|. +|++..|+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga---~V~v~~r~ 184 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGA---NVTVGARK 184 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC---EEEEEECC
Confidence 6899999995 8899999999998884 56777776
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.50 E-value=3 Score=42.55 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=27.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+|.|.|.+|.+|+-++..|+++|..|
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatV 186 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSV 186 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEE
Confidence 479999999999999999999999998665
|
|
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=81.10 E-value=20 Score=36.58 Aligned_cols=90 Identities=14% Similarity=0.215 Sum_probs=53.9
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHh---hhhhHHHHHhhhcccccccccCc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVL---AKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~---~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+|||.| .|.+|..+++.|...| |++|.++.-..-..+-..|- .+++- ....-+.+++..| .-+
T Consensus 1 kVlVVG-aGGlG~eilknLal~G--vg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np-------~v~ 70 (291)
T cd01488 1 KILVIG-AGGLGCELLKNLALSG--FRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP-------GVN 70 (291)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC-------CCE
Confidence 589999 5889999999999876 57887765433222211110 00111 1112344555444 246
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
++++.+++.+ .+ ...+++.|+||.+..
T Consensus 71 I~~~~~~i~~-------~~--~~f~~~fdvVi~alD 97 (291)
T cd01488 71 VTPHFGKIQD-------KD--EEFYRQFNIIICGLD 97 (291)
T ss_pred EEEEecccCc-------hh--HHHhcCCCEEEECCC
Confidence 7788888773 22 256789999998644
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=80.84 E-value=4.5 Score=41.66 Aligned_cols=27 Identities=11% Similarity=0.329 Sum_probs=22.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCcc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVK 40 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~ 40 (570)
.+|.|.||||++|..|++.|.+ -|++.
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~-hp~~~ 29 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAG-RSDIE 29 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhc-CCCeE
Confidence 5899999999999999997766 46664
|
|
| >KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=80.40 E-value=15 Score=37.27 Aligned_cols=118 Identities=22% Similarity=0.227 Sum_probs=61.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhh---hhhHHHHHhhhcccccccccCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLA---KDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~---~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++.-|.|.|+ |.+|++++..|+|+|. .+|.++.=..-..+...|..=..++ -+--.-|+++. .+
T Consensus 72 l~~syVVVVG~-GgVGSwv~nmL~RSG~--qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~---------sk 139 (430)
T KOG2018|consen 72 LTNSYVVVVGA-GGVGSWVANMLLRSGV--QKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHF---------SK 139 (430)
T ss_pred hcCcEEEEEec-CchhHHHHHHHHHhcC--ceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHH---------Hh
Confidence 35677999995 7799999999999985 5565443222222222221101110 01111233322 11
Q ss_pred eE-EEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 87 IT-FVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 87 v~-~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
+. +.+.|-.......+.++ +.+..++|.|+.|.- |+..-..||++|-.. +++.
T Consensus 140 iaPw~eIdar~~l~~~~s~e--dll~gnPdFvvDciD--------------NidtKVdLL~y~~~~-~l~V 193 (430)
T KOG2018|consen 140 IAPWCEIDARNMLWTSSSEE--DLLSGNPDFVVDCID--------------NIDTKVDLLEYCYNH-GLKV 193 (430)
T ss_pred hCccceecHHHhhcCCCchh--hhhcCCCCeEeEhhh--------------hhhhhhHHHHHHHHc-CCce
Confidence 11 12233222222222333 245667999998743 455556799999887 6663
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=80.38 E-value=4 Score=40.01 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=29.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.+.+|+|+|++| +|..+++.+...| .+|+++.++.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g---~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAG---ARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcC---CeEEEEcCCH
Confidence 4678999999999 9999998888777 4567777653
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria | Back alignment and domain information |
|---|
Probab=80.21 E-value=5.2 Score=39.81 Aligned_cols=63 Identities=32% Similarity=0.379 Sum_probs=40.7
Q ss_pred hHHHHHhhhcccccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHH
Q 008315 67 LFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 67 ~f~~l~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~ 146 (570)
.|+++|+.. +.|..+.|+..+ |. ..+.+.+|++++.. +...-..+..
T Consensus 78 af~kIkekR---------pDIl~ia~~~~E--------Dp-~~i~~~aDi~~~~D---------------~~~~G~~i~~ 124 (275)
T PF12683_consen 78 AFRKIKEKR---------PDILLIAGEPHE--------DP-EVISSAADIVVNPD---------------EISRGYTIVW 124 (275)
T ss_dssp HHHHHHHH----------TTSEEEESS--S---------H-HHHHHHSSEEEE-----------------HHHHHHHHHH
T ss_pred HHHHHHhcC---------CCeEEEcCCCcC--------CH-HHHhhccCeEeccc---------------hhhccHHHHH
Confidence 477888875 457888888773 22 25556789988731 2334567889
Q ss_pred HHHHccCceEEEEEecc
Q 008315 147 FAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 147 ~a~~~~~lk~fV~vSTa 163 (570)
+|++| |.+.|||+|.-
T Consensus 125 ~Ak~m-GAktFVh~sfp 140 (275)
T PF12683_consen 125 AAKKM-GAKTFVHYSFP 140 (275)
T ss_dssp HHHHT-T-S-EEEEEET
T ss_pred HHHHc-CCceEEEEech
Confidence 99999 99999999843
|
They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 570 | ||||
| 4dqv_A | 478 | Crystal Structure Of Reductase (R) Domain Of Non-Ri | 3e-11 |
| >pdb|4DQV|A Chain A, Crystal Structure Of Reductase (R) Domain Of Non-Ribosomal Peptide Synthetase From Mycobacterium Tuberculosis Length = 478 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 570 | |||
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 3e-43 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-12 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 3e-11 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 7e-05 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 1e-04 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 2e-04 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 5e-04 |
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 160 bits (405), Expect = 3e-43
Identities = 81/367 (22%), Positives = 134/367 (36%), Gaps = 66/367 (17%)
Query: 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNV 70
E + +L++G TGF+ + + ++LR +L L+RA E A R + + +
Sbjct: 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLE-KTFDSGDPEL 130
Query: 71 LKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERY 130
L+ ++++ VAGD S DLGL L +D++V+SAA+ Y
Sbjct: 131 LR-----HFKELAADRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFP-Y 183
Query: 131 DVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
FG N G L+ A KLK F +VSTA V S DA++
Sbjct: 184 HELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAI----------EPSAFTEDADI 232
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ--SKEN 248
+VI R GW Y +K GE+++++
Sbjct: 233 RVIS------------------------PTRTVDGGWAGGYGTSKWAGEVLLREANDLCA 268
Query: 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ-GNLPCLVGETKTI-------M 300
L + + R ++ + D + + ++ G P E +
Sbjct: 269 LPVAVFRCGMILADTSYAGQLNMSDW--VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHF 326
Query: 301 DVIPVDMVVNAMIVAMVAHAKQPSDAN-IYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
D +PV V A+ V A YHV + + + L +D W+
Sbjct: 327 DGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVD----------WLI 376
Query: 360 KQGKPIE 366
+ G PI
Sbjct: 377 EAGYPIR 383
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.0 bits (165), Expect = 5e-12
Identities = 88/631 (13%), Positives = 170/631 (26%), Gaps = 204/631 (32%)
Query: 6 VVEFLENKIIL---VSGVTGFVAKVF----IEKILRVQPNVKKLYLLIRA--ADTESAAL 56
++ E+ + V + I+ I+ + V L + E
Sbjct: 21 ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ 80
Query: 57 RFQNEVLAKDLFNVLKEKWGTRLN-------SFISEK-------ITFVAGDISSED--LG 100
+F EVL + + L T +I ++ F ++S L
Sbjct: 81 KFVEEVLRIN-YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139
Query: 101 LKDS--NLKEELWNELDVMVNS-----AAITKFDERYDVAFGINTLGAIHLVNFAKKCVK 153
L+ + L+ +D ++ S A + I +N
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD----FKIFWLNLKNCNSP 195
Query: 154 -------LKVFVHVSTAYVAGERTGLILENPLDGASG-----------------LD---- 185
K+ + + + ++ + L
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 186 ------FDAEMK---------VIDQKLNELKTKGAPQKEI----------TLFMKNLGTE 220
F+ K V D L+ T +L +K L
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDF-LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 221 R-------------------AKIHGWPNTYVFTKTMG----EMIMQQSKENLSLVIIRPT 257
I T+ K + I++ S L
Sbjct: 315 PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE------- 367
Query: 258 IVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI------MDVIPVDMVVNA 311
Y++ F + L ++F SA ++P T + + V +VVN
Sbjct: 368 --PAEYRKMF----DRL----SVFPPSA--HIP-----TILLSLIWFDVIKSDVMVVVNK 410
Query: 312 MIVAMVAHAKQPSDA--NIYHVGSSLRNPVTLV-----SILDYGFVYFTKKPWINKQGKP 364
+ + KQP ++ +I + L+ + SI+D+ Y K + + P
Sbjct: 411 LHKYSLV-EKQPKESTISIPSIYLELKVKLENEYALHRSIVDH---YNIPKTFDSDDLIP 466
Query: 365 IEVSKIILFSSIASFHGYMQICYLLPLKGLQLANTVFHNFFKGVYNDLR---KKVKF--- 418
+ + +S I H LK ++ + F+ V+ D R +K++
Sbjct: 467 PYLDQYF-YSHIG-HH----------LKNIEHPERM--TLFRMVFLDFRFLEQKIRHDST 512
Query: 419 ----------VMRVAEIYKPYFYFNGIFDDTNTEKLRMTTKGSRTETDLFYFDPDSIEWR 468
++ + YKPY I D+ R + F P E
Sbjct: 513 AWNASGSILNTLQQLKFYKPY-----ICDNDPKY--------ERLVNAILDFLPKIEE-- 557
Query: 469 DYFMNTHIPGVENILQQKRAFPITKVFRSGH 499
N ++L+ +F H
Sbjct: 558 ----NLICSKYTDLLRIALMAEDEAIFEEAH 584
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 3e-11
Identities = 38/305 (12%), Positives = 73/305 (23%), Gaps = 93/305 (30%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
V G TG + I ++ L+ R +
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLV---LIHRPSS------------------------ 48
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDER-YDVA 133
++ + ++ D E LD ++ SA R +
Sbjct: 49 ---QIQRLAYLEPECRVAEML-------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEE 98
Query: 134 FGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVI 193
+ ++ ++V +AY
Sbjct: 99 VASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHP----------------------- 134
Query: 194 DQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI-MQQSKENLSLV 252
+G P E + YV K + +Q++ L +V
Sbjct: 135 ---------QGLPGHEGLFY-----DSLPSGKSS---YVLCKWALDEQAREQARNGLPVV 177
Query: 253 IIRPTIVSGTYKEPFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311
I P +V G D+ T + A G + V +VI
Sbjct: 178 IGIPGMVLG------EL---DIGPTTGRVITAIGNGEMTHYVA---GQRNVIDAAEAGRG 225
Query: 312 MIVAM 316
+++A+
Sbjct: 226 LLMAL 230
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 63 LAKDLFNVLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELW-NELDVMVNSA 121
L +L +L E+ SE D++ L++ + DV++N+A
Sbjct: 12 LGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFP------RLEDFIIKKRPDVIINAA 65
Query: 122 AITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKV-FVHVSTAYV 165
A+T D + A+ IN H+ + + VH+ST YV
Sbjct: 66 AMTDVDKCEIEKEKAYKINAEAVRHI---VRAGKVIDSYIVHISTDYV 110
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 115 DVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKV-FVHVSTAYV-AGER 169
++++ AA TK D + D+A+ IN +GA ++ A + V++ST YV G+R
Sbjct: 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNV---AVASQLVGAKLVYISTDYVFQGDR 114
Query: 170 TGLILE----NPL 178
E P+
Sbjct: 115 PEGYDEFHNPAPI 127
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 115 DVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKV-FVHVSTAYV 165
+V++N AA T D E+YD+A+ IN +G +L A + V +ST YV
Sbjct: 65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNL---AAAAYSVGAEIVQISTDYV 116
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 5e-04
Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 41/168 (24%)
Query: 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFN 69
L N ++V G GFV ++++L N+V D
Sbjct: 30 LANTNVMVVGGAGFVGSNLVKRLLE----------------------LGVNQVHVVDNLL 67
Query: 70 VLKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT----- 124
++N + F I+ D L L +E D + + A
Sbjct: 68 S-----AEKINVPDHPAVRFSETSIT-------DDALLASLQDEYDYVFHLATYHGNQSS 115
Query: 125 KFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172
D D NTL + L K +LK V+ + E+T
Sbjct: 116 IHDPLADHE--NNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFD 161
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.98 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.98 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.98 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.98 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.97 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.96 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.96 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.96 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.96 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.96 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.96 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.95 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.95 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.95 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.95 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.95 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.95 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.95 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.94 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.94 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.94 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.94 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.94 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.93 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.93 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.93 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.93 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.92 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.92 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.92 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.91 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.91 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.91 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.9 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.9 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.9 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.9 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.89 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.89 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.87 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.86 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.85 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.85 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.85 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.85 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.84 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.83 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.83 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.82 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.81 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.81 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.81 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.81 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.81 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.8 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.8 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.8 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.8 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.79 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.79 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.79 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.79 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.79 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.78 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.78 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.78 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.78 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.78 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.78 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.77 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.77 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.77 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.77 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.77 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.77 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.77 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.76 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.76 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.76 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.76 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.76 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.76 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.76 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.76 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.76 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.76 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.76 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.76 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.75 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.75 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.75 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.75 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.75 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.75 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.75 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.75 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.75 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.75 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.75 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.74 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.74 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.74 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.74 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.74 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.74 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.74 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.74 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.74 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.74 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.74 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.74 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.74 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.74 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.74 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.73 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.73 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.73 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.73 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.73 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.73 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.73 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.73 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.73 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.73 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.73 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.73 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.73 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.73 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.73 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.73 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.73 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.73 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.73 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.72 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.72 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.72 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.72 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.72 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.72 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.72 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.72 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.72 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.72 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.72 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.72 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.72 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.72 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.72 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.72 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.72 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.72 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.72 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.71 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.71 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.71 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.71 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.71 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.71 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.71 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.71 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.71 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.71 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.71 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.71 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.71 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.7 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.7 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.7 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.7 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.7 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.7 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.7 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.7 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.7 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.7 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.7 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.7 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.7 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.7 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.7 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.7 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.69 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.69 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.69 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.69 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.69 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.69 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.69 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.69 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.69 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.69 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.69 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.69 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.69 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.68 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.68 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.68 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.68 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.68 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.68 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.68 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.68 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.68 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.68 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.67 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.67 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.67 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.67 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.66 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.66 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.66 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.66 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.66 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.66 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.65 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.65 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.65 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.64 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.64 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.64 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.64 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.64 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.64 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.64 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.63 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.62 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.62 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.61 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.61 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.61 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.6 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.6 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.6 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.57 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.57 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.56 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.56 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.55 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.54 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.54 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.52 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.52 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.51 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.49 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.49 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.48 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.48 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.48 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.47 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.43 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.43 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.42 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.42 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.37 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.32 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.25 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.16 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.16 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.14 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.03 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.94 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.91 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.87 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.86 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.86 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.81 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.8 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.52 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.44 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.44 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.4 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.4 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.2 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.02 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.9 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.68 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.64 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.57 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.49 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.45 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.42 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.42 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.35 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.27 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.25 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.16 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.14 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.82 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 96.71 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.57 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.37 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.35 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.29 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.19 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 95.86 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 95.7 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 95.7 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 95.67 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 95.65 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 95.62 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 95.49 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 95.48 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 95.46 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 95.46 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 95.45 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 95.43 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 95.33 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 95.25 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 95.19 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.16 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 95.15 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 95.12 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 94.84 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 94.75 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 94.7 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 94.52 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 94.49 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 94.42 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 94.38 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 94.3 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 94.3 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 94.29 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 94.27 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 94.18 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 94.14 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 94.13 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 93.91 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 93.9 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 93.87 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 93.77 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 93.75 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 93.73 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 93.68 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 93.66 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 93.65 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 93.6 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 93.6 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 93.56 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 93.47 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 93.45 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 93.3 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 93.25 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 93.25 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 93.09 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 93.08 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 93.0 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 92.9 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 92.85 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 92.82 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 92.82 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 92.8 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 92.54 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 92.52 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 92.45 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 92.43 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 92.42 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 92.42 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 92.41 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 92.27 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 91.98 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 91.71 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 91.6 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 91.48 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 91.26 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 91.2 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 90.94 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 90.87 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 90.66 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 90.5 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 90.43 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 90.22 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 90.2 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 90.14 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 89.65 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 89.61 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 89.5 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 89.49 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 89.46 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 89.29 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 89.01 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 89.0 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 88.77 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 88.33 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 87.95 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 87.94 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 87.77 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 87.68 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 87.68 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 87.32 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 87.28 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 87.25 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 86.9 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 86.42 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 86.36 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 86.18 | |
| 1tt5_A | 531 | APPBP1, amyloid protein-binding protein 1; cell cy | 86.17 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 86.07 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 85.72 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 85.56 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 85.5 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 85.45 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 85.42 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 85.4 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 85.25 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 85.22 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 85.13 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 84.77 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 84.7 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 84.51 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 84.5 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 84.28 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 83.99 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 83.91 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 83.58 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 83.58 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 83.46 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 83.33 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 83.13 | |
| 1tt5_B | 434 | Ubiquitin-activating enzyme E1C isoform 1; cell cy | 82.98 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 82.84 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 82.51 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 82.25 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 82.24 | |
| 3cmm_A | 1015 | Ubiquitin-activating enzyme E1 1; UBA1, protein tu | 82.23 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 82.14 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 82.02 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 81.88 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 81.54 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 81.52 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 81.49 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 81.22 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 81.1 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 80.97 | |
| 2nvu_B | 805 | Maltose binding protein/NEDD8-activating enzyme E1 | 80.92 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 80.86 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 80.74 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 80.73 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 80.7 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 80.42 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 80.09 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 80.02 |
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-32 Score=281.69 Aligned_cols=268 Identities=19% Similarity=0.235 Sum_probs=207.2
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA-ALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+++|+|||||||||||++|+++|+++|+ +|+++.|....... .+.+. ...+ .....++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-------------~~~~----~~~~~~~ 81 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQ---VVIGLDNFSTGHQYNLDEVK-------------TLVS----TEQWSRF 81 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHH-------------HTSC----HHHHTTE
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCCCchhhhhhhh-------------hccc----cccCCce
Confidence 45789999999999999999999999985 56899997654322 11211 1000 0001679
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+++.+|+++ .+..+.+++++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||++
T Consensus 82 ~~~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 153 (351)
T 3ruf_A 82 CFIEGDIRD-------LTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSS 153 (351)
T ss_dssp EEEECCTTC-------HHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGG
T ss_pred EEEEccCCC-------HHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHH
Confidence 999999994 444568889999999999986543 456678899999999999999998 789999999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+|+...+ .+++|+.+. .+.+.|+.||+.+|+++..
T Consensus 154 vyg~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 188 (351)
T 3ruf_A 154 TYGDHPA----LPKVEENIG-----------------------------------------NPLSPYAVTKYVNEIYAQV 188 (351)
T ss_dssp GGTTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred hcCCCCC----CCCccCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9987542 233333322 3468999999999999987
Q ss_pred h--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 245 S--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
+ ..+++++|+||+.|||+...+...+. .....++..+..|....++++++...++|+|||+|++++.++....
T Consensus 189 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-- 263 (351)
T 3ruf_A 189 YARTYGFKTIGLRYFNVFGRRQDPNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD-- 263 (351)
T ss_dssp HHHHHCCCCEEEEECSEESTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG--
T ss_pred HHHHhCCCEEEEeeCceeCcCCCCCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc--
Confidence 6 34899999999999998775432221 2234566677778777888999999999999999999998886411
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
...+++||++++ .++|+.|+++.+.+.++..+
T Consensus 264 ~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 264 SAKDNIYNVAVG--DRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp GGCSEEEEESCS--CCEEHHHHHHHHHHHHHTTC
T ss_pred ccCCCEEEeCCC--CcccHHHHHHHHHHHhCccc
Confidence 123789999998 89999999999999999854
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-31 Score=277.40 Aligned_cols=260 Identities=23% Similarity=0.276 Sum_probs=199.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||||||++|+++|+++|+.+ +|+++.|....... +++. . .....++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~-~v~~~~~~~~~~~~-~~l~-------------~-------~~~~~~~~~ 79 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETY-KIINFDALTYSGNL-NNVK-------------S-------IQDHPNYYF 79 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTE-EEEEEECCCTTCCG-GGGT-------------T-------TTTCTTEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCc-EEEEEeccccccch-hhhh-------------h-------hccCCCeEE
Confidence 467999999999999999999999999764 56677776532221 1111 0 001257999
Q ss_pred EEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+.+|+++ .+..+.++++ +|+|||+||..... +.....+++|+.||.+++++|++. ++++|||+||++
T Consensus 80 ~~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~ 151 (346)
T 4egb_A 80 VKGEIQN-------GELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDE 151 (346)
T ss_dssp EECCTTC-------HHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGG
T ss_pred EEcCCCC-------HHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchH
Confidence 9999994 4445577776 99999999987654 456678999999999999999998 889999999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+|+... ...+++|+.+. .+.+.|+.||+.+|+++.+
T Consensus 152 vy~~~~---~~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 187 (346)
T 4egb_A 152 VYGSLG---KTGRFTEETPL-----------------------------------------APNSPYSSSKASADMIALA 187 (346)
T ss_dssp GGCCCC---SSCCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCC---cCCCcCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 998752 12233333332 3468899999999999998
Q ss_pred h--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 245 S--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
+ ..+++++++||+.|||+...+. .....++..+..|....++++++...++|+|+|+|++++.++....
T Consensus 188 ~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-- 258 (346)
T 4egb_A 188 YYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-- 258 (346)
T ss_dssp HHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC--
Confidence 7 3489999999999999866321 2344566677778766778999999999999999999999987432
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ .++++.|+++.+.+.+|..+
T Consensus 259 --~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 288 (346)
T 4egb_A 259 --VGEVYNIGGN--NEKTNVEVVEQIITLLGKTK 288 (346)
T ss_dssp --TTCEEEECCS--CCEEHHHHHHHHHHHHTCCG
T ss_pred --CCCEEEECCC--CceeHHHHHHHHHHHhCCCc
Confidence 3789999998 88999999999999998764
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-31 Score=269.90 Aligned_cols=244 Identities=18% Similarity=0.163 Sum_probs=196.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|+++|+ +|+++.|+..... ..+++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~------------------------------~~~~~~~~ 48 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN---TPIILTRSIGNKA------------------------------INDYEYRV 48 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCC-----------------------------------CCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCCccc------------------------------CCceEEEE
Confidence 37999999999999999999999986 5689999832110 13678999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g 171 (570)
+|++ + ++. ..+++++|+|||+||..... .....+++|+.|+.+++++|++. ++++|||+||.++|+...
T Consensus 49 ~Dl~-~------~~~-~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~- 117 (311)
T 3m2p_A 49 SDYT-L------EDL-INQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDET- 117 (311)
T ss_dssp CCCC-H------HHH-HHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGG-
T ss_pred cccc-H------HHH-HHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCC-
Confidence 9998 3 443 47888999999999998766 55667899999999999999998 899999999999998753
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCCC
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~l 249 (570)
..+++|+.+. .+.+.|+.||+.+|+++.++ ..++
T Consensus 118 ---~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~~~g~ 153 (311)
T 3m2p_A 118 ---SLPWNEKELP-----------------------------------------LPDLMYGVSKLACEHIGNIYSRKKGL 153 (311)
T ss_dssp ---GCSBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred ---CCCCCCCCCC-----------------------------------------CCCchhHHHHHHHHHHHHHHHHHcCC
Confidence 2233333322 34689999999999999987 3689
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++|+||+.|||+...+. .....++..+..|....++++++...++|+++|+|++++.++.... .+++|
T Consensus 154 ~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~ 222 (311)
T 3m2p_A 154 CIKNLRFAHLYGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK----VSGTF 222 (311)
T ss_dssp EEEEEEECEEECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT----CCEEE
T ss_pred CEEEEeeCceeCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC----CCCeE
Confidence 999999999999876432 2344566677778777777899999999999999999998885321 47899
Q ss_pred EeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
|++++ .++|+.|+++.+.+.++..+
T Consensus 223 ~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (311)
T 3m2p_A 223 NIGSG--DALTNYEVANTINNAFGNKD 247 (311)
T ss_dssp EECCS--CEECHHHHHHHHHHHTTCTT
T ss_pred EeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 99998 89999999999999998764
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=291.02 Aligned_cols=289 Identities=26% Similarity=0.404 Sum_probs=209.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc-cEEEEEEecCCcccHHHHHHHHHhhh---hhHHHHHhhhcccccccccC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV-KKLYLLIRAADTESAALRFQNEVLAK---DLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V-~~i~~lvR~~~~~~~~~rl~~~l~~~---~~f~~l~~~~~~~~~~~~~~ 85 (570)
.++|+|||||||||||++|+++|++.++ + .+|++++|++......+++.+ .+.. .+...+... ...
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~-~g~~V~~l~R~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~--------~~~ 140 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLD-VDGRLICLVRAESDEDARRRLEK-TFDSGDPELLRHFKEL--------AAD 140 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSC-TTCEEEEEECSSSHHHHHHHHHG-GGCSSCHHHHHHHHHH--------HTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCC-CCCEEEEEECCCCcHHHHHHHHH-HHHhcchhhhhhhhhh--------ccC
Confidence 4689999999999999999999999833 2 578999999887777777663 2221 111112221 136
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
++.++.+|++++++|++.+++ +.+++++|+|||+||.+++ ++++..+++|+.||.+++++|.+. ++++|||+||.++
T Consensus 141 ~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v 217 (478)
T 4dqv_A 141 RLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNA-FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADV 217 (478)
T ss_dssp TEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSB-SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGG
T ss_pred ceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCC-cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhh
Confidence 899999999999999977775 5788899999999999888 667778999999999999999987 8899999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
++... ..+++|+.+.++. ..++.....+.+.|+.||+.+|++++++
T Consensus 218 ~~~~~----~~~~~E~~~~~p~------------------------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 263 (478)
T 4dqv_A 218 GAAIE----PSAFTEDADIRVI------------------------------SPTRTVDGGWAGGYGTSKWAGEVLLREA 263 (478)
T ss_dssp GTTSC----TTTCCSSSCHHHH------------------------------CCEEECCTTSEECHHHHHHHHHHHHHHH
T ss_pred cCccC----CCCcCCccccccc------------------------------CcccccccccccchHHHHHHHHHHHHHH
Confidence 87642 2233333322110 0111122245688999999999999987
Q ss_pred c--CCCcEEEEeccccccCCCC----CCCCccccccchHHHHHH-HhcCCCc-eeecC------CCceeecchHHHHHHH
Q 008315 246 K--ENLSLVIIRPTIVSGTYKE----PFPGWVEDLKTINALFVA-SAQGNLP-CLVGE------TKTIMDVIPVDMVVNA 311 (570)
Q Consensus 246 ~--~~lp~~IvRPsiV~g~~~~----p~~gw~~~~~~~~~~i~~-~~~G~~~-~~~~~------~~~~~d~VpVDdva~a 311 (570)
. .+++++|+||+.|||+... ...+|+ ..++.. ...|..+ .+++. ++...++|||||+|++
T Consensus 264 ~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~------~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~a 337 (478)
T 4dqv_A 264 NDLCALPVAVFRCGMILADTSYAGQLNMSDWV------TRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEA 337 (478)
T ss_dssp HHHHCCCEEEEEECEEECCSSSSSCCCTTBHH------HHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHH
T ss_pred HHHhCCCeEEEECceeeCCCccCCcCCHHHHH------HHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHH
Confidence 3 4899999999999997541 112222 233332 3335432 22222 2678999999999999
Q ss_pred HHHHHHHhcC-CCCCCceEEeccCCCCcccHHhHHHHHhhh
Q 008315 312 MIVAMVAHAK-QPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 312 ii~a~~~~~~-~~~~~~iyn~~s~~~~~it~~el~~~~~~~ 351 (570)
++.++..... ....+++||++++..++++|.|+++.+.+.
T Consensus 338 i~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 338 IAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp HHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred HHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 9999874221 223468999999833449999999999986
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.4e-31 Score=273.95 Aligned_cols=263 Identities=19% Similarity=0.154 Sum_probs=199.3
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHH--hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILR--VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~--~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
-+++|+|||||||||||++|+++|++ .|+ +|+++.|.........+..+.+ .........+
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~---~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 69 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA---KVVVLDKFRSNTLFSNNRPSSL--------------GHFKNLIGFK 69 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS---EEEEEECCCCC-------CCCC--------------CCGGGGTTCC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC---eEEEEECCCccccccccchhhh--------------hhhhhccccC
Confidence 36789999999999999999999999 674 5689999765322111100000 0000111346
Q ss_pred eEEEEccCCCCCCCCChhhhHHHH-hCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEEL-WNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+.++.+|+++ .+..+.+ ..++|+|||+||.... .+.++..+++|+.||.+++++|++. +++ |||+||++
T Consensus 70 ~~~~~~Dl~d-------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~ 140 (362)
T 3sxp_A 70 GEVIAADINN-------PLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAG 140 (362)
T ss_dssp SEEEECCTTC-------HHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGG
T ss_pred ceEEECCCCC-------HHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHH
Confidence 7999999994 4445566 7899999999998764 3668889999999999999999987 677 99999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+|+...+.++|. .+. .+.+.|+.||+.+|++++.
T Consensus 141 vyg~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~ 174 (362)
T 3sxp_A 141 VYGNTKAPNVVG-----KNE-----------------------------------------SPENVYGFSKLCMDEFVLS 174 (362)
T ss_dssp GGCSCCSSBCTT-----SCC-----------------------------------------CCSSHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 998765433332 222 3568899999999999999
Q ss_pred hcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 245 SKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 245 ~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
+...++++++||+.|||+...+...+. .....++..+..|....+.++++...++|+|+|+|++++.++... .
T Consensus 175 ~~~~~~~~~lR~~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~----~ 247 (362)
T 3sxp_A 175 HSNDNVQVGLRYFNVYGPREFYKEKTA---SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ----K 247 (362)
T ss_dssp TTTTSCEEEEEECSEESTTCGGGGGGS---CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS----S
T ss_pred HhccCCEEEEEeCceeCcCCCCCCcch---hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC----C
Confidence 866699999999999998764322111 234456667777776667788899999999999999999988522 2
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
.+ +||++++ .++|+.|+++.+.+.++
T Consensus 248 ~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 248 SG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp CE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred CC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 35 9999998 89999999999999998
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.4e-31 Score=275.60 Aligned_cols=270 Identities=18% Similarity=0.192 Sum_probs=203.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+++|+|||||||||||++|+++|+++ |+ +|+++.|+....... . ...++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~-------~-------------------~~~~v 71 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDW---EVFGMDMQTDRLGDL-------V-------------------KHERM 71 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSC---EEEEEESCCTTTGGG-------G-------------------GSTTE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCC---EEEEEeCChhhhhhh-------c-------------------cCCCe
Confidence 357899999999999999999999998 75 568999976432110 0 02579
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+++.+|+++ +.+..+.+++++|+|||+||..... +.....+++|+.|+.+++++|++. + ++|||+||++
T Consensus 72 ~~~~~Dl~~------d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~ 143 (372)
T 3slg_A 72 HFFEGDITI------NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSE 143 (372)
T ss_dssp EEEECCTTT------CHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGG
T ss_pred EEEeCccCC------CHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHH
Confidence 999999983 2333457788999999999987643 456778899999999999999998 5 8999999999
Q ss_pred ccCCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 165 VAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 165 v~~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
+|+...+ .+.|. .+.. .......+.+.|+.||+.+|+++.
T Consensus 144 vyg~~~~~~~~e~-----~~~~----------------------------------~~~p~~~p~~~Y~~sK~~~E~~~~ 184 (372)
T 3slg_A 144 VYGMCADEQFDPD-----ASAL----------------------------------TYGPINKPRWIYACSKQLMDRVIW 184 (372)
T ss_dssp GGBSCCCSSBCTT-----TCCE----------------------------------EECCTTCTTHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCcc-----cccc----------------------------------ccCCCCCCCCcHHHHHHHHHHHHH
Confidence 9987532 22222 1110 000001245689999999999999
Q ss_pred HhcC-CCcEEEEeccccccCCCCCCCCccccc-cchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 244 QSKE-NLSLVIIRPTIVSGTYKEPFPGWVEDL-KTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 244 ~~~~-~lp~~IvRPsiV~g~~~~p~~gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
++.. +++++|+||+.|||+...+..++.... .....++..+..|....++++++...++|+|+|+|++++.++.....
T Consensus 185 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~ 264 (372)
T 3slg_A 185 GYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNG 264 (372)
T ss_dssp HHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG
T ss_pred HHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccC
Confidence 8733 899999999999999875433222222 23445666777787777888899999999999999999999874421
Q ss_pred CCCCCceEEecc-CCCCcccHHhHHHHHhhhcccCCC
Q 008315 322 QPSDANIYHVGS-SLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 322 ~~~~~~iyn~~s-~~~~~it~~el~~~~~~~~~~~p~ 357 (570)
. ..+++||+++ + .++|+.|+++.+.+.+|..+.
T Consensus 265 ~-~~~~~~ni~~~~--~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 265 V-ATGKIYNIGNPN--NNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp T-TTTEEEEECCTT--CEEEHHHHHHHHHHHHHHCTT
T ss_pred c-CCCceEEeCCCC--CCccHHHHHHHHHHHhCCCcc
Confidence 1 2378999999 4 699999999999999988653
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=271.22 Aligned_cols=258 Identities=16% Similarity=0.172 Sum_probs=194.3
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
..-.++|+|||||||||||++|+++|++.|++| +++.|.... .+
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V---~~~~r~~~~---------------------------------~~ 57 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTV---RGFDLRPSG---------------------------------TG 57 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCE---EEEESSCCS---------------------------------SC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEE---EEEeCCCCC---------------------------------CC
Confidence 334578999999999999999999999999654 788886532 35
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCccc-CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDE-RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~-~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
+.++.+|+++ .+....+++++|+|||+||...... ..+..+++|+.|+.+++++|++. ++++|||+||+++
T Consensus 58 ~~~~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~v 129 (347)
T 4id9_A 58 GEEVVGSLED-------GQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEV 129 (347)
T ss_dssp CSEEESCTTC-------HHHHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred ccEEecCcCC-------HHHHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHH
Confidence 6789999994 4445688899999999999877653 34788999999999999999997 8899999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
|+.... .+.++.|+.+. .+.+.|+.||+.+|+++..+
T Consensus 130 yg~~~~--~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 166 (347)
T 4id9_A 130 YPENRP--EFLPVTEDHPL-----------------------------------------CPNSPYGLTKLLGEELVRFH 166 (347)
T ss_dssp TTTTSC--SSSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC--CCCCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 987311 12233332322 34688999999999999876
Q ss_pred --cCCCcEEEEeccccc-------------cCCCCCCCCccc----cccchHHHHHHHhcCCCceeecCCCceeec----
Q 008315 246 --KENLSLVIIRPTIVS-------------GTYKEPFPGWVE----DLKTINALFVASAQGNLPCLVGETKTIMDV---- 302 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~-------------g~~~~p~~gw~~----~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~---- 302 (570)
..+++++|+||+.|| |+...+.+.+.+ .-.....++.....|....+.++++...++
T Consensus 167 ~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 246 (347)
T 4id9_A 167 QRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHI 246 (347)
T ss_dssp HHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECE
T ss_pred HHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCc
Confidence 458999999999999 543211000000 002233455566677766778888888999
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++|+|+|++++.++.... ..+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 247 i~v~Dva~ai~~~~~~~~---~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 295 (347)
T 4id9_A 247 TDTRDMVAGILLALDHPE---AAGGTFNLGAD--EPADFAALLPKIAALTGLPI 295 (347)
T ss_dssp EEHHHHHHHHHHHHHCGG---GTTEEEEESCS--SCEEHHHHHHHHHHHHCCCE
T ss_pred EeHHHHHHHHHHHhcCcc---cCCCeEEECCC--CcccHHHHHHHHHHHhCCCC
Confidence 999999999999997432 12689999998 89999999999999998753
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=262.39 Aligned_cols=266 Identities=17% Similarity=0.187 Sum_probs=196.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA-ALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|+|||||||||||++|+++|+++|++ |+++.|....... .+++. ... ..++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~-------------~~~--------~~~~~~ 59 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNLVNSKREAIARIE-------------KIT--------GKTPAF 59 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCCSSSCTHHHHHHH-------------HHH--------SCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecCCcchHHHHHHHH-------------hhc--------CCCceE
Confidence 4689999999999999999999999964 5788887654332 22221 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.
T Consensus 60 ~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~ 131 (341)
T 3enk_A 60 HETDVSD-------ERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSAT 131 (341)
T ss_dssp ECCCTTC-------HHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGG
T ss_pred EEeecCC-------HHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecce
Confidence 9999994 444457776 899999999987643 445677899999999999999987 789999999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+++...+ .+++|+.+. .+.+.|+.||+.+|++++.
T Consensus 132 ~~g~~~~----~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~ 166 (341)
T 3enk_A 132 VYGVPER----SPIDETFPL-----------------------------------------SATNPYGQTKLMAEQILRD 166 (341)
T ss_dssp GBCSCSS----SSBCTTSCC-----------------------------------------BCSSHHHHHHHHHHHHHHH
T ss_pred EecCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986532 223322222 2457899999999999987
Q ss_pred h---cCCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhcCCCc--eeec------CCCceeecchHHHHHHH
Q 008315 245 S---KENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQGNLP--CLVG------ETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 245 ~---~~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~G~~~--~~~~------~~~~~~d~VpVDdva~a 311 (570)
+ ..+++++++||+.|||+.....-|.... ......++.....|... .+.+ +++...++|||+|+|++
T Consensus 167 ~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a 246 (341)
T 3enk_A 167 VEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARG 246 (341)
T ss_dssp HHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHH
T ss_pred HhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHH
Confidence 6 2359999999999999865433232211 12333445554555333 3345 78899999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++.++...... ..+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 247 ~~~~~~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 288 (341)
T 3enk_A 247 HIAALDALERR-DASLTVNLGTG--RGYSVLEVVRAFEKASGRAV 288 (341)
T ss_dssp HHHHHHHHHHH-TSCEEEEESCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred HHHHHHhhhcC-CcceEEEeCCC--CceeHHHHHHHHHHHhCCCc
Confidence 99988753111 12689999998 89999999999999998754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=262.64 Aligned_cols=249 Identities=16% Similarity=0.205 Sum_probs=188.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ +|+++.|....... ....+++++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY---EVVVVDNLSSGRRE---------------------------FVNPSAELHVR 50 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEECCCSSCCGG---------------------------GSCTTSEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCCCchh---------------------------hcCCCceEEEC
Confidence 5899999999999999999999996 45788887644321 01357899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
|++++ + ...++++ |+|||+||.... .+.+...+++|+.|+.+++++|++. ++++|||+||+++|+..
T Consensus 51 Dl~d~-------~-~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 51 DLKDY-------S-WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDA 120 (312)
T ss_dssp CTTST-------T-TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSC
T ss_pred ccccH-------H-HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCC
Confidence 99964 3 2355566 999999996532 2457788999999999999999987 78999999999999875
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~ 247 (570)
.+ .+++|+.+. .+.+.|+.||+.+|++++.+ ..
T Consensus 121 ~~----~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~~~~ 155 (312)
T 3ko8_A 121 DV----IPTPEEEPY-----------------------------------------KPISVYGAAKAAGEVMCATYARLF 155 (312)
T ss_dssp SS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHh
Confidence 42 223332222 34688999999999999886 34
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCC-CceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGN-LPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
+++++++||+.|||+...+ + ....++..+..+. .....++++...++++|+|+|++++.++.........+
T Consensus 156 g~~~~~lrp~~v~g~~~~~--~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~ 227 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRH--G------VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227 (312)
T ss_dssp CCEEEEEEECEEECTTCCS--S------HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSE
T ss_pred CCCEEEEeeccccCcCCCC--C------hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCC
Confidence 8999999999999986532 1 2334555555553 33467888999999999999999999987522122337
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++||++++ .++++.|+++.+.+.+|..|
T Consensus 228 ~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 255 (312)
T 3ko8_A 228 LALNVGNV--DAVRVLDIAQIVAEVLGLRP 255 (312)
T ss_dssp EEEEESCS--SCEEHHHHHHHHHHHHTCCC
T ss_pred cEEEEcCC--CceeHHHHHHHHHHHhCCCC
Confidence 89999998 89999999999999998765
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=266.24 Aligned_cols=250 Identities=14% Similarity=0.086 Sum_probs=188.7
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++++|+|||||||||||++|+++|++.|+ +... ....+.
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---------~~~~--------------------------------~~~~~~ 41 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG---------LPGE--------------------------------DWVFVS 41 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC---------CTTC--------------------------------EEEECC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC---------cccc--------------------------------cccccC
Confidence 46889999999999999999999999885 1100 012345
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
.+.+|+++ .+....++++ +|+|||+||.+.. .+.....+++|+.||.+++++|++. ++++|||+||
T Consensus 42 ~~~~D~~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS 113 (319)
T 4b8w_A 42 SKDADLTD-------TAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLS 113 (319)
T ss_dssp TTTCCTTS-------HHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECC
T ss_pred ceecccCC-------HHHHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcc
Confidence 56789984 4444567765 9999999998652 3567778999999999999999998 7899999999
Q ss_pred ccccCCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc-hHHHHHHHHHH
Q 008315 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN-TYVFTKTMGEM 240 (570)
Q Consensus 163 a~v~~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~ 240 (570)
+++|+...+ .++|..... .+. .+.+ .|+.||+.+|+
T Consensus 114 ~~vyg~~~~~~~~E~~~~~-~~~-----------------------------------------~p~~~~Y~~sK~~~E~ 151 (319)
T 4b8w_A 114 TCIFPDKTTYPIDETMIHN-GPP-----------------------------------------HNSNFGYSYAKRMIDV 151 (319)
T ss_dssp GGGSCSSCCSSBCGGGGGB-SCC-----------------------------------------CSSSHHHHHHHHHHHH
T ss_pred hhhcCCCCCCCcccccccc-CCC-----------------------------------------CCCcchHHHHHHHHHH
Confidence 999987532 333331100 000 1233 59999999999
Q ss_pred HHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHH----HhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 241 IMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVA----SAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 241 ~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~----~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
++..+ ..+++++|+||+.|||+...+..... .....++.. +..|....++++++...++|||+|+|++++.
T Consensus 152 ~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 228 (319)
T 4b8w_A 152 QNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDG---HVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228 (319)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCCCTTTS---CHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEeeccccCCCCCCCCccc---cccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHH
Confidence 99876 45899999999999998765322111 122233333 6677776778999999999999999999999
Q ss_pred HHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++..... ..+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 229 ~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 266 (319)
T 4b8w_A 229 VLREYNE--VEPIILSVGEE--DEVSIKEAAEAVVEAMDFHG 266 (319)
T ss_dssp HHHHCCC--SSCEEECCCGG--GCEEHHHHHHHHHHHTTCCS
T ss_pred HHhcccc--CCceEEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 9875322 23679999998 89999999999999998754
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=263.23 Aligned_cols=267 Identities=18% Similarity=0.185 Sum_probs=200.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES-AALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|||||||||||++|+++|++.|+ +|+++.|...... ..+.+. ++.. .....++.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-------------~~~~----~~~~~~~~ 84 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ---KVVGLDNFATGHQRNLDEVR-------------SLVS----EKQWSNFK 84 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCHHHHHHHH-------------HHSC----HHHHTTEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCccchhhHHHHh-------------hhcc----cccCCceE
Confidence 5789999999999999999999999985 5688999754321 111111 1100 00015789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
++.+|+++ .+..+.+++++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++|||+||.++
T Consensus 85 ~~~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~ 156 (352)
T 1sb8_A 85 FIQGDIRN-------LDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSST 156 (352)
T ss_dssp EEECCTTS-------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGG
T ss_pred EEECCCCC-------HHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHh
Confidence 99999994 444568888999999999986542 457778999999999999999987 8899999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
++...+ .+++|+++. .+.+.|+.||+.+|.++..+
T Consensus 157 ~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~ 191 (352)
T 1sb8_A 157 YGDHPG----LPKVEDTIG-----------------------------------------KPLSPYAVTKYVNELYADVF 191 (352)
T ss_dssp GTTCCC----SSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHHH
Confidence 986532 223322221 34578999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+...+. .....++..+..|....++++++...++++|+|+|++++.++.... .
T Consensus 192 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~--~ 266 (352)
T 1sb8_A 192 SRCYGFSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL--D 266 (352)
T ss_dssp HHHHCCCCEEEEECCEECTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG--G
T ss_pred HHHcCCCEEEEEECceeCcCCCCCcchh---hHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccc--c
Confidence 34899999999999998764321111 1123455566677766778899999999999999999998876311 1
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhc---ccCC
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYF---TKKP 356 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~---~~~p 356 (570)
..+++||++++ .++|+.|+++.+.+.+ |..+
T Consensus 267 ~~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~g~~~ 300 (352)
T 1sb8_A 267 ARNQVYNIAVG--GRTSLNQLFFALRDGLAENGVSY 300 (352)
T ss_dssp GCSEEEEESCS--CCEEHHHHHHHHHHHHHHTTCCC
T ss_pred CCCceEEeCCC--CCccHHHHHHHHHHHHHhcCCCC
Confidence 23689999998 8999999999999998 6643
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=261.88 Aligned_cols=258 Identities=23% Similarity=0.305 Sum_probs=191.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|+++|++ .+|+++.|....... +.+. ++ . ...++.++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~-~~V~~~~r~~~~~~~-~~~~-~~-----------------~--~~~~~~~~ 59 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPD-WEVINIDKLGYGSNP-ANLK-DL-----------------E--DDPRYTFV 59 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGGT-TT-----------------T--TCTTEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCC-CEEEEEecCcccCch-hHHh-hh-----------------c--cCCceEEE
Confidence 4689999999999999999999999744 257888886422111 0110 00 0 02578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
.+|+++ .+..+.++.++|+|||+||....+ +.++..+++|+.|+.+++++|.+.+..++|||+||.++|+
T Consensus 60 ~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 60 KGDVAD-------YELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp ECCTTC-------HHHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred EcCCCC-------HHHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 999994 444557778999999999987542 4567789999999999999999873347999999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
... +.+++|+.+. .+.+.|+.||+.+|+++..+
T Consensus 133 ~~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~ 167 (336)
T 2hun_A 133 DIL----KGSFTENDRL-----------------------------------------MPSSPYSATKAASDMLVLGWTR 167 (336)
T ss_dssp CCS----SSCBCTTBCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCC----CCCcCCCCCC-----------------------------------------CCCCccHHHHHHHHHHHHHHHH
Confidence 642 1233332222 24578999999999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++... ..
T Consensus 168 ~~~~~~~ilrp~~v~g~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~ 236 (336)
T 2hun_A 168 TYNLNASITRCTNNYGPYQFP-E------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG----ES 236 (336)
T ss_dssp HTTCEEEEEEECEEESTTCCT-T------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC----CT
T ss_pred HhCCCEEEEeeeeeeCcCCCc-C------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC----CC
Confidence 358999999999999987532 1 112345555666665566788889999999999999999988642 13
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++||++++ .++|+.|+++.+.+.++..
T Consensus 237 g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (336)
T 2hun_A 237 REIYNISAG--EEKTNLEVVKIILRLMGKG 264 (336)
T ss_dssp TCEEEECCS--CEECHHHHHHHHHHHTTCC
T ss_pred CCEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 689999998 8999999999999998875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-30 Score=260.30 Aligned_cols=245 Identities=18% Similarity=0.256 Sum_probs=188.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++| . ++++.|...... .....++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g-~---~v~~~~~~~~~~---------------------------~~~~~~~~~~~~ 50 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN-E---IVVIDNLSSGNE---------------------------EFVNEAARLVKA 50 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS-C---EEEECCCSSCCG---------------------------GGSCTTEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-C---EEEEEcCCCCCh---------------------------hhcCCCcEEEEC
Confidence 589999999999999999999988 2 234444332211 011357899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
|++ +++. ..+++++|+|||+||.... .+.++..+++|+.|+.+++++|++. ++++|||+||..+|+..
T Consensus 51 Dl~-------~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~ 121 (313)
T 3ehe_A 51 DLA-------ADDI-KDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEA 121 (313)
T ss_dssp CTT-------TSCC-HHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSC
T ss_pred cCC-------hHHH-HHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcC
Confidence 998 4333 4777899999999996533 3567888999999999999999987 78999999999999875
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~ 247 (570)
.+ .+++|+.+. .+.+.|+.||+.+|.++..+ ..
T Consensus 122 ~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~ 156 (313)
T 3ehe_A 122 KV----IPTPEDYPT-----------------------------------------HPISLYGASKLACEALIESYCHTF 156 (313)
T ss_dssp SS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred CC----CCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 32 233332222 34578999999999999886 45
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcC-CCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG-NLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
+++++++||+.|||+...+ + ....++..+..+ ......++++...++|+|+|+|++++.++. ....+
T Consensus 157 g~~~~ilRp~~v~G~~~~~--~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~----~~~~~ 224 (313)
T 3ehe_A 157 DMQAWIYRFANVIGRRSTH--G------VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR----GDERV 224 (313)
T ss_dssp TCEEEEEECSCEESTTCCC--S------HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT----CCSSE
T ss_pred CCCEEEEeeccccCcCCCc--C------hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc----cCCCC
Confidence 8999999999999986532 2 233455555555 333467889999999999999999999885 22236
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++||++++ .++|+.|+++.+.+.+|..|
T Consensus 225 ~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 252 (313)
T 3ehe_A 225 NIFNIGSE--DQIKVKRIAEIVCEELGLSP 252 (313)
T ss_dssp EEEECCCS--CCEEHHHHHHHHHHHTTCCC
T ss_pred ceEEECCC--CCeeHHHHHHHHHHHhCCCC
Confidence 89999998 89999999999999998765
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-29 Score=258.13 Aligned_cols=257 Identities=16% Similarity=0.161 Sum_probs=189.2
Q ss_pred CccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008315 2 ELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNS 81 (570)
Q Consensus 2 ~~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
+.+....+.+.++|||||||||||++|+++|++.|+ +|+++.|+.... .
T Consensus 2 ~~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~----------------------------~ 50 (321)
T 2pk3_A 2 RGSHHHHHHGSMRALITGVAGFVGKYLANHLTEQNV---EVFGTSRNNEAK----------------------------L 50 (321)
T ss_dssp -----------CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCTTCC----------------------------C
T ss_pred CCcccccccCcceEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCccc----------------------------c
Confidence 334455677889999999999999999999999986 457888865431 0
Q ss_pred cccCceEEEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 82 FISEKITFVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
-++.++.+|+++ .+..+.++++ +|+|||+||..... +.++..+++|+.|+.+++++|+++.++++
T Consensus 51 ---l~~~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~ 120 (321)
T 2pk3_A 51 ---PNVEMISLDIMD-------SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCR 120 (321)
T ss_dssp ---TTEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred ---ceeeEEECCCCC-------HHHHHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 147889999994 4434566665 99999999987642 36788899999999999999987756899
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
|||+||.++++... -...+++|+++. .+.+.|+.||+
T Consensus 121 iv~~SS~~v~g~~~--~~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~ 157 (321)
T 2pk3_A 121 ILTIGSSEEYGMIL--PEESPVSEENQL-----------------------------------------RPMSPYGVSKA 157 (321)
T ss_dssp EEEEEEGGGTBSCC--GGGCSBCTTSCC-----------------------------------------BCCSHHHHHHH
T ss_pred EEEEccHHhcCCCC--CCCCCCCCCCCC-----------------------------------------CCCCccHHHHH
Confidence 99999999998631 012233332222 24578999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhc---C--CCceeecCCCceeecchHHHHH
Q 008315 237 MGEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ---G--NLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~---G--~~~~~~~~~~~~~d~VpVDdva 309 (570)
.+|+++..+ ..+++++++||+.|||+...+ .+ ....++..+.. | ......++++...++++++|+|
T Consensus 158 ~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva 230 (321)
T 2pk3_A 158 SVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL-GF------VTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV 230 (321)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECEEECTTCCT-TS------HHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC-Cc------hHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence 999999876 348999999999999986532 11 12233333333 6 3445678888999999999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++++.++... ..+++||++++ .++++.|+++.+.+.++..
T Consensus 231 ~a~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 270 (321)
T 2pk3_A 231 QAYWLLSQYG----KTGDVYNVCSG--IGTRIQDVLDLLLAMANVK 270 (321)
T ss_dssp HHHHHHHHHC----CTTCEEEESCS--CEEEHHHHHHHHHHHSSSC
T ss_pred HHHHHHHhCC----CCCCeEEeCCC--CCeeHHHHHHHHHHHhCCC
Confidence 9999988743 13689999998 8999999999999998864
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-29 Score=256.40 Aligned_cols=257 Identities=20% Similarity=0.254 Sum_probs=190.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ +|+++.|...... +. ...+++++.+
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~-------------------------~~~~~~~~~~ 51 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL---SVVVVDNLQTGHE--DA-------------------------ITEGAKFYNG 51 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GG-------------------------SCTTSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCCCcCch--hh-------------------------cCCCcEEEEC
Confidence 6899999999999999999999985 4578888654321 00 1136889999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.+++++|++. ++++|||+||.++++
T Consensus 52 D~~~-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 52 DLRD-------KAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYG 123 (330)
T ss_dssp CTTC-------HHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGC
T ss_pred CCCC-------HHHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeC
Confidence 9994 444457777 899999999987543 456778999999999999999987 789999999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
... ..+++|+++. .+.+.|+.||+.+|+++..+
T Consensus 124 ~~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~ 158 (330)
T 2c20_A 124 EVD----VDLITEETMT-----------------------------------------NPTNTYGETKLAIEKMLHWYSQ 158 (330)
T ss_dssp SCS----SSSBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCC----CCCCCcCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHH
Confidence 643 2233332322 24578999999999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCC--Cceeec------CCCceeecchHHHHHHHHHHHH
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGN--LPCLVG------ETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~--~~~~~~------~~~~~~d~VpVDdva~aii~a~ 316 (570)
..+++++++||+.|||+.....-|..+. .......+.....+. ...+++ +++...++|||+|+|++++.++
T Consensus 159 ~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~ 238 (330)
T 2c20_A 159 ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGL 238 (330)
T ss_dssp TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHH
T ss_pred HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHH
Confidence 3489999999999999864222221111 122233333333332 223444 6788999999999999999988
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
...... ..+++||++++ .++|+.|+++.+.+.+|..
T Consensus 239 ~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 274 (330)
T 2c20_A 239 KDLQNG-GESDFYNLGNG--NGFSVKEIVDAVREVTNHE 274 (330)
T ss_dssp HHHHTT-CCCEEEECCCT--TCBCHHHHHHHHHHHTTSC
T ss_pred hccccC-CCCCeEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 754321 12589999988 8999999999999998865
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=263.88 Aligned_cols=265 Identities=14% Similarity=0.153 Sum_probs=194.8
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++++|+|||||||||||++|+++|++.|+ +|+++.|+......... .+ . ...++
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~---~~---------~----------~~~~~ 59 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA---TVKGYSLTAPTVPSLFE---TA---------R----------VADGM 59 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCSSSSCHHH---HT---------T----------TTTTS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC---eEEEEeCCCcccchhhH---hh---------c----------cCCce
Confidence 567899999999999999999999999985 56899997654321110 00 0 02578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
.++.+|+++ .+....++++ +|+|||+||.... .+.+...+++|+.|+.+++++|.+++++++|||+||
T Consensus 60 ~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 60 QSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred EEEEccccC-------HHHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 999999994 3434566665 8999999996432 245677899999999999999999844899999999
Q ss_pred ccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
.++|+...+ ..++.|+++. .+.+.|+.||+.+|+++
T Consensus 133 ~~vyg~~~~---~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~ 168 (357)
T 1rkx_A 133 DKCYDNKEW---IWGYRENEAM-----------------------------------------GGYDPYSNSKGCAELVT 168 (357)
T ss_dssp GGGBCCCCS---SSCBCTTSCB-----------------------------------------CCSSHHHHHHHHHHHHH
T ss_pred HHHhCCCCc---CCCCCCCCCC-----------------------------------------CCCCccHHHHHHHHHHH
Confidence 999987532 1122222211 24678999999999999
Q ss_pred HHhc-----------CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 243 QQSK-----------ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 243 ~~~~-----------~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+. .+++++++||+.|||+...+.. .....++..+..|.... .++++...++|||+|+|++
T Consensus 169 ~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~------~~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a 241 (357)
T 1rkx_A 169 SSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSG 241 (357)
T ss_dssp HHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHH
T ss_pred HHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccc------cHHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHH
Confidence 8762 2899999999999998642211 22334555666665433 3467789999999999999
Q ss_pred HHHHHHHhc-CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 312 MIVAMVAHA-KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 312 ii~a~~~~~-~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++.++.... .....+++||++++...++|+.|+++.+.+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~ 286 (357)
T 1rkx_A 242 YLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEG 286 (357)
T ss_dssp HHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTT
T ss_pred HHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCC
Confidence 998886421 11122679999975236899999999999998865
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.6e-29 Score=257.18 Aligned_cols=265 Identities=19% Similarity=0.205 Sum_probs=190.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc-------ccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT-------ESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~-------~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+|+|||||||||||++|+++|++.|++ |+++.|.... ....+++. ... .
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~r~~~~~~~~~~~l~-------------~~~--------~ 57 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYL---PVVIDNFHNAFRGGGSLPESLRRVQ-------------ELT--------G 57 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCC---EEEEECSSSSCBCSSSSBHHHHHHH-------------HHH--------T
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCcccccccccHHHHHHHH-------------hcc--------C
Confidence 479999999999999999999999965 4788886543 22222221 100 2
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.++.++.+|+++ .+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||
T Consensus 58 ~~~~~~~~D~~~-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~ 129 (348)
T 1ek6_A 58 RSVEFEEMDILD-------QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVF 129 (348)
T ss_dssp CCCEEEECCTTC-------HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEE
T ss_pred CceEEEECCCCC-------HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 468899999994 443456766 899999999986542 456778999999999999999987 7899999
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||.++++... ..+++|+.+.. ...+.|+.||+.+|
T Consensus 130 ~SS~~~~g~~~----~~~~~E~~~~~----------------------------------------p~~~~Y~~sK~~~e 165 (348)
T 1ek6_A 130 SSSATVYGNPQ----YLPLDEAHPTG----------------------------------------GCTNPYGKSKFFIE 165 (348)
T ss_dssp EEEGGGGCSCS----SSSBCTTSCCC----------------------------------------CCSSHHHHHHHHHH
T ss_pred ECcHHHhCCCC----CCCcCCCCCCC----------------------------------------CCCCchHHHHHHHH
Confidence 99999998642 22333322211 11578999999999
Q ss_pred HHHHHhc---CCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhc--CCCceeec------CCCceeecchHH
Q 008315 240 MIMQQSK---ENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQ--GNLPCLVG------ETKTIMDVIPVD 306 (570)
Q Consensus 240 ~~v~~~~---~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~--G~~~~~~~------~~~~~~d~VpVD 306 (570)
+++..+. .+++++++||+.|||+......|.... .......+..... +....+++ +++...++|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 245 (348)
T 1ek6_A 166 EMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVV 245 (348)
T ss_dssp HHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHH
Confidence 9998762 349999999999999854211111110 1122233333333 33334444 567899999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
|+|++++.++....... .+++||++++ .++|+.|+++.+.+.++..
T Consensus 246 Dva~a~~~~~~~~~~~~-g~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 291 (348)
T 1ek6_A 246 DLAKGHIAALRKLKEQC-GCRIYNLGTG--TGYSVLQMVQAMEKASGKK 291 (348)
T ss_dssp HHHHHHHHHHHHHTTTC-CEEEEEECCS--CCEEHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHhcccccC-CceEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 99999999887542111 1379999988 8899999999999998865
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-29 Score=258.63 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=194.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCc--cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNV--KKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V--~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+|||||||||||++|+++|+++ ++++ .+|+++.|....... +.+. ++ . ...++++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~ 59 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA-PV-------------D------ADPRLRF 59 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG-GG-------------T------TCTTEEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCch-hhhh-hc-------------c------cCCCeEE
Confidence 57999999999999999999996 4332 367888886532111 0110 00 0 0257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+++ .+..+.++.++|+|||+||..... +.++..+++|+.|+.+++++|.+. ++++|||+||.++|
T Consensus 60 ~~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vy 131 (337)
T 1r6d_A 60 VHGDIRD-------AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (337)
T ss_dssp EECCTTC-------HHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEcCCCC-------HHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHh
Confidence 9999994 444557789999999999987543 456678999999999999999997 78999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+... +.+++|+.+. .+.+.|+.||+.+|+++..+
T Consensus 132 g~~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~ 166 (337)
T 1r6d_A 132 GSID----SGSWTESSPL-----------------------------------------EPNSPYAASKAGSDLVARAYH 166 (337)
T ss_dssp CCCS----SSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCCCCCCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHH
Confidence 8642 1233332222 24578999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++... .
T Consensus 167 ~~~g~~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~ 235 (337)
T 1r6d_A 167 RTYGLDVRITRCCNNYGPYQHP-E------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG----R 235 (337)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-T------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC----C
T ss_pred HHHCCCEEEEEeeeeECCCCCC-C------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC----C
Confidence 348999999999999987532 1 112345555666665566788889999999999999999988642 1
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.+++||++++ .++|+.|+++.+.+.++..
T Consensus 236 ~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 236 AGEIYHIGGG--LELTNRELTGILLDSLGAD 264 (337)
T ss_dssp TTCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred CCCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 3689999998 8999999999999998875
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-29 Score=264.05 Aligned_cols=279 Identities=12% Similarity=0.067 Sum_probs=190.3
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH--------------HHHHHHHHhhhhhHHHH
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA--------------ALRFQNEVLAKDLFNVL 71 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~--------------~~rl~~~l~~~~~f~~l 71 (570)
...++++++|||||||||||++|+++|+++|++ |+++.|....... .+++. .+
T Consensus 5 ~~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~----------~~ 71 (404)
T 1i24_A 5 HHHHHHGSRVMVIGGDGYCGWATALHLSKKNYE---VCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RW 71 (404)
T ss_dssp -------CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HH
T ss_pred cccccCCCeEEEeCCCcHHHHHHHHHHHhCCCe---EEEEEecCccccccccccccccccchhhhhhh----------hH
Confidence 455778999999999999999999999999964 5777774321100 11111 00
Q ss_pred HhhhcccccccccCceEEEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCH---HHHHHHHHHHHHH
Q 008315 72 KEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERY---DVAFGINTLGAIH 143 (570)
Q Consensus 72 ~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~---~~~~~~Nv~gt~~ 143 (570)
... ...++.++.+|+++ .+..+.++++ +|+|||+||..... +.. ...+++|+.||.+
T Consensus 72 ~~~--------~~~~v~~~~~Dl~d-------~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ 136 (404)
T 1i24_A 72 KAL--------TGKSIELYVGDICD-------FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLN 136 (404)
T ss_dssp HHH--------HCCCCEEEESCTTS-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhc--------cCCceEEEECCCCC-------HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHH
Confidence 000 02568999999994 4434566776 99999999986532 222 3468999999999
Q ss_pred HHHHHHHccCc-eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 144 LVNFAKKCVKL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 144 ll~~a~~~~~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++++|++. +. ++|||+||+++|+...+.++|..++++... .+ + ...
T Consensus 137 ll~a~~~~-~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~-~~-------------------~------------~~~ 183 (404)
T 1i24_A 137 VLFAIKEF-GEECHLVKLGTMGEYGTPNIDIEEGYITITHNG-RT-------------------D------------TLP 183 (404)
T ss_dssp HHHHHHHH-CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETT-EE-------------------E------------EEE
T ss_pred HHHHHHHh-CCCcEEEEeCcHHHhCCCCCCCCcccccccccc-cc-------------------c------------ccc
Confidence 99999987 55 699999999999875444444422110000 00 0 000
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh--cCCCcEEEEeccccccCCCCC---CCCccccc-------cchHHHHHHHhcCCCc
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEP---FPGWVEDL-------KTINALFVASAQGNLP 290 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p---~~gw~~~~-------~~~~~~i~~~~~G~~~ 290 (570)
....+.+.|+.||+.+|+++..+ ..+++++++||+.|||+...+ .++|.... .....++..+..|...
T Consensus 184 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 263 (404)
T 1i24_A 184 YPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPL 263 (404)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCee
Confidence 00134678999999999998876 348999999999999987643 12222211 2244566677777766
Q ss_pred eeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC--ceEEeccCCCCcccHHhHHHHHhhh
Q 008315 291 CLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA--NIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 291 ~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~--~iyn~~s~~~~~it~~el~~~~~~~ 351 (570)
.++++++...++|||+|+|++++.++.... ..+ ++||+++ .++|+.|+++.+.+.
T Consensus 264 ~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~---~~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 264 TVYGKGGQTRGYLDIRDTVQCVEIAIANPA---KAGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp EEETTSCCEEEEEEHHHHHHHHHHHHHSCC---CTTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred EEeCCCCceECcEEHHHHHHHHHHHHhCcc---cCCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 677889999999999999999999886321 124 7999976 579999999999987
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=265.17 Aligned_cols=264 Identities=19% Similarity=0.190 Sum_probs=193.0
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.+++|+|||||||||||++|+++|++.| + +|+++.|....... .+. ...++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~--~l~-----------------------~~~~v 80 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVN---QVHVVDNLLSAEKI--NVP-----------------------DHPAV 80 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCS---EEEEECCCTTCCGG--GSC-----------------------CCTTE
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCc---eEEEEECCCCCchh--hcc-----------------------CCCce
Confidence 4678999999999999999999999998 5 46788887543210 000 02578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+++.+|+++ .+..+.+++++|+|||+||..... +.....+++|+.|+.+++++|++.+++++|||+||.+
T Consensus 81 ~~~~~Dl~d-------~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~ 153 (377)
T 2q1s_A 81 RFSETSITD-------DALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC 153 (377)
T ss_dssp EEECSCTTC-------HHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-
T ss_pred EEEECCCCC-------HHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH
Confidence 999999994 444567888999999999987653 4567789999999999999998864688999999999
Q ss_pred ccCCCCC-eec--cccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 165 VAGERTG-LIL--ENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 165 v~~~~~g-~i~--E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
+|+...+ .++ |.... .+. ..+.+.|+.||+.+|++
T Consensus 154 vyg~~~~~~~~~~E~~~~--~~~----------------------------------------~~~~~~Y~~sK~~~E~~ 191 (377)
T 2q1s_A 154 SIAEKTFDDAKATEETDI--VSL----------------------------------------HNNDSPYSMSKIFGEFY 191 (377)
T ss_dssp -------------CCCCC--CCS----------------------------------------SCCCSHHHHHHHHHHHH
T ss_pred HcCCCCCCCcCccccccc--ccc----------------------------------------cCCCCchHHHHHHHHHH
Confidence 9986432 222 22100 010 02357899999999999
Q ss_pred HHHh--cCCCcEEEEeccccccCCCCCCCC-ccccc-----cchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH-H
Q 008315 242 MQQS--KENLSLVIIRPTIVSGTYKEPFPG-WVEDL-----KTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA-M 312 (570)
Q Consensus 242 v~~~--~~~lp~~IvRPsiV~g~~~~p~~g-w~~~~-----~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a-i 312 (570)
+..+ ..+++++++||+.|||+...+.+| |.... .....++..+..|....++++++...++|+|+|+|++ +
T Consensus 192 ~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i 271 (377)
T 2q1s_A 192 SVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLI 271 (377)
T ss_dssp HHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHH
Confidence 9876 348999999999999987632222 22111 2244566666777665667888899999999999999 8
Q ss_pred HHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 313 IVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+.++... . .+ +||++++ .++|+.|+++.+.+.++..+
T Consensus 272 ~~~~~~~---~-~g-~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 308 (377)
T 2q1s_A 272 ACAADGT---P-GG-VYNIASG--KETSIADLATKINEITGNNT 308 (377)
T ss_dssp HHHHHCC---T-TE-EEECCCC--CCEEHHHHHHHHHHHHTCCS
T ss_pred HHHHhcC---C-CC-eEEecCC--CceeHHHHHHHHHHHhCCCC
Confidence 8887632 1 35 9999998 89999999999999998754
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-29 Score=257.53 Aligned_cols=265 Identities=20% Similarity=0.246 Sum_probs=195.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|+++ |+ +|+++.|+...... +. ...+++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~-------~~-------------------~~~~~~~~~ 51 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAISR-------FL-------------------NHPHFHFVE 51 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC---EEEEEESCCGGGGG-------GT-------------------TCTTEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC---EEEEEeCCcchHHH-------hh-------------------cCCCeEEEe
Confidence 58999999999999999999997 65 56889997543210 00 025789999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+|++++ .+..+.+++++|+|||+||.... .+.....+++|+.|+.+++++|++. + ++|||+||+++++.
T Consensus 52 ~D~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~ 123 (345)
T 2bll_A 52 GDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGM 123 (345)
T ss_dssp CCTTTC------SHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBT
T ss_pred ccccCc------HHHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCC
Confidence 999952 33345677899999999997653 2456778999999999999999987 5 89999999999986
Q ss_pred CCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 169 RTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
..+ .++|. ++.... .....+.+.|+.||+.+|+++..+
T Consensus 124 ~~~~~~~e~-----~~~~~~----------------------------------~~~~~~~~~Y~~sK~~~e~~~~~~~~ 164 (345)
T 2bll_A 124 CSDKYFDED-----HSNLIV----------------------------------GPVNKPRWIYSVSKQLLDRVIWAYGE 164 (345)
T ss_dssp CCCSSBCTT-----TCCCBC----------------------------------CCTTCGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCCc-----cccccc----------------------------------CcccCcccccHHHHHHHHHHHHHHHH
Confidence 532 23332 211000 000023468999999999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+...+..+ ......++..+..|....++++++...++++|+|+|++++.++...... .
T Consensus 165 ~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~-~ 243 (345)
T 2bll_A 165 KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR-C 243 (345)
T ss_dssp HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT-T
T ss_pred hcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcccc-C
Confidence 3489999999999999876432221111 1223456666677776667788889999999999999999988743211 2
Q ss_pred CCceEEeccCCCC-cccHHhHHHHHhhhcccCC
Q 008315 325 DANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyn~~s~~~~-~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ . ++|+.|+++.+.+.++..+
T Consensus 244 ~g~~~~i~~~--~~~~s~~e~~~~i~~~~g~~~ 274 (345)
T 2bll_A 244 DGEIINIGNP--ENEASIEELGEMLLASFEKHP 274 (345)
T ss_dssp TTEEEEECCT--TSEEEHHHHHHHHHHHHHTCT
T ss_pred CCceEEeCCC--CCCCCHHHHHHHHHHHhCCCc
Confidence 3689999987 5 8999999999999988764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-29 Score=260.44 Aligned_cols=259 Identities=15% Similarity=0.070 Sum_probs=196.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.|+ +|+++.|+...... ....+++++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~---------------------------~~~~~v~~~ 77 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH---YVIASDWKKNEHMT---------------------------EDMFCDEFH 77 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCSSSC---------------------------GGGTCSEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC---eEEEEECCCccchh---------------------------hccCCceEE
Confidence 468999999999999999999999985 56889997644211 002468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
.+|+++ .+..+.+++++|+|||+||.... .+.++..+++|+.|+.+++++|++. ++++|||+||+.++
T Consensus 78 ~~Dl~d-------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~ 149 (379)
T 2c5a_A 78 LVDLRV-------MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 149 (379)
T ss_dssp ECCTTS-------HHHHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred ECCCCC-------HHHHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehhee
Confidence 999994 44456788999999999998653 4567888999999999999999987 78999999999998
Q ss_pred CCCCCee-ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GERTGLI-LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~~~g~i-~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+...+.. +..+++|+++. ...+.+.|+.||+.+|+++..+
T Consensus 150 ~~~~~~~~~~~~~~E~~~~---------------------------------------~~~~~~~Y~~sK~~~E~~~~~~ 190 (379)
T 2c5a_A 150 PEFKQLETTNVSLKESDAW---------------------------------------PAEPQDAFGLEKLATEELCKHY 190 (379)
T ss_dssp CGGGSSSSSSCEECGGGGS---------------------------------------SBCCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccCCCcCcccCC---------------------------------------CCCCCChhHHHHHHHHHHHHHH
Confidence 7542100 00111111100 0034678999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++++||+.|||+...+..++. .....++..+..|.. ..++++++...++++|+|+|++++.++...
T Consensus 191 ~~~~gi~~~ilrp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~--- 264 (379)
T 2c5a_A 191 NKDFGIECRIGRFHNIYGPFGTWKGGRE---KAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--- 264 (379)
T ss_dssp HHHHCCEEEEEEECCEECTTSCCSSSCC---CHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS---
T ss_pred HHHHCCCEEEEEeCceeCcCCCcccccc---cHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc---
Confidence 34899999999999998764433221 123345555656654 456788889999999999999999988632
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ .++|+.|+++.+.+.++..+
T Consensus 265 --~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 294 (379)
T 2c5a_A 265 --FREPVNIGSD--EMVSMNEMAEMVLSFEEKKL 294 (379)
T ss_dssp --CCSCEEECCC--CCEEHHHHHHHHHHTTTCCC
T ss_pred --CCCeEEeCCC--CccCHHHHHHHHHHHhCCCC
Confidence 2579999998 89999999999999988653
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=277.33 Aligned_cols=267 Identities=20% Similarity=0.268 Sum_probs=191.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHH-HHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFN-VLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~-~l~~~~~~~~~~~~~~kv~~v 90 (570)
.|+|||||||||||++|+++|++.| .+|++++|+.......+|+.+.+... |. .+... ...+++++
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~l~~~l~~~--~~~~~~~~--------~~~~v~~v 216 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY--FSEETVEM--------MLSNIEVI 216 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTE---EEEEEEEESSSHHHHHHHHHHHHHHH--SCHHHHHH--------HSTTEEEE
T ss_pred CCeEEEECCccchHHHHHHHHHhcC---CEEEEEECCCChHHHHHHHHHHHHHh--cccccchh--------ccCceEEE
Confidence 4799999999999999999998766 56799999988776777766433211 11 01111 13689999
Q ss_pred EccCCC-CCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 91 AGDISS-EDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~-~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
.||+++ +.++ +..++|+|||+||.+++..++...+++|+.||.+++++|++ +.++|||+||.++ |..
T Consensus 217 ~~Dl~d~~~l~---------~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~ 284 (508)
T 4f6l_B 217 VGDFECMDDVV---------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTY 284 (508)
T ss_dssp EEBTTBCSSCC---------CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSE
T ss_pred ecCCcccccCC---------CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccC
Confidence 999997 4333 55789999999999988888888899999999999999998 5689999999999 542
Q ss_pred CC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cC
Q 008315 170 TG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-KE 247 (570)
Q Consensus 170 ~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~~ 247 (570)
.+ ...+.+++|+++... ..+.+.|+.||+.+|+++.++ ..
T Consensus 285 ~~~~~~~~~~~E~~~~~~--------------------------------------~~~~~~Y~~sK~~~E~~~~~~~~~ 326 (508)
T 4f6l_B 285 FDIDTEDVTFSEADVYKG--------------------------------------QLLTSPYTRSKFYSELKVLEAVNN 326 (508)
T ss_dssp ECTTCSCCEECTTCSCSS--------------------------------------BCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CccCCcCccccccccccc--------------------------------------ccCCCcHHHHHHHHHHHHHHHHHc
Confidence 11 112334444333211 135789999999999999987 46
Q ss_pred CCcEEEEeccccccCCCCCCCCcc-ccc--cchHHHHHHHhcCCCceee-cCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWV-EDL--KTINALFVASAQGNLPCLV-GETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~-~~~--~~~~~~i~~~~~G~~~~~~-~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
+++++|+||+.|+|+... +|. .+. .....++.....+. .++ ++++...+++||||+|++++.++....
T Consensus 327 gi~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~--- 398 (508)
T 4f6l_B 327 GLDGRIVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQLD--CIGVSMAEMPVDFSFVDTTARQIVALAQVNT--- 398 (508)
T ss_dssp TCEEEEEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTCS--EEETTGGGSEEECEEHHHHHHHHHHHTTBCC---
T ss_pred CCCEEEEecceeccCCCC---CcccCCcchHHHHHHHHHHHHcC--CCCCCccCceEEEEcHHHHHHHHHHHHhCCC---
Confidence 999999999999998763 331 111 12334555554433 233 346789999999999999999886322
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhc
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~ 352 (570)
.+++||++++ ++++|.|+++.+.+..
T Consensus 399 -~~~~~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 399 -PQIIYHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp -SCSEEEESCS--CEEEHHHHHHHHHSSC
T ss_pred -CCCEEEeCCC--CCCCHHHHHHHHHHcC
Confidence 4789999998 8999999999998764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=268.55 Aligned_cols=270 Identities=20% Similarity=0.234 Sum_probs=191.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHH-HHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFN-VLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~-~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+|+|||||||||||++|+++|++.| .+|++++|+.......+++.+.+... |. .+... ...++.+
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~l~~~l~~~--~~~~~~~~--------~~~~v~~ 134 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYS---HRIYCFIRADNEEIAWYKLMTNLNDY--FSEETVEM--------MLSNIEV 134 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTE---EEEEEEEECSSHHHHHHHHHHHHHHH--SCHHHHHH--------HHTTEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCC---CEEEEEECCCChHHHHHHHHHHHHHh--cccccccc--------ccCceEE
Confidence 46799999999999999999998877 46789999988766777766433221 11 01111 1368999
Q ss_pred EEccCCC-CCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 90 VAGDISS-EDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 90 v~gDl~~-~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+.||+++ +.++ ...++|+|||+||...+.+++...+++|+.|+.+++++|.+ +.++|||+||.++ |.
T Consensus 135 v~~Dl~d~~~l~---------~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~ 202 (427)
T 4f6c_A 135 IVGDFECMDDVV---------LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GT 202 (427)
T ss_dssp EEECC---CCCC---------CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GS
T ss_pred EeCCCCCcccCC---------CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CC
Confidence 9999996 2222 55789999999999887788888899999999999999998 6799999999999 54
Q ss_pred CC-CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-c
Q 008315 169 RT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-K 246 (570)
Q Consensus 169 ~~-g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~ 246 (570)
.. +...+.+++|+++..+ ..+.+.|+.||+.+|.+++++ .
T Consensus 203 ~~~~~~~~~~~~E~~~~~~--------------------------------------~~~~~~Y~~sK~~~E~~~~~~~~ 244 (427)
T 4f6c_A 203 YFDIDTEDVTFSEADVYKG--------------------------------------QLLTSPYTRSKFYSELKVLEAVN 244 (427)
T ss_dssp EECSSCSCCEECTTCSCSS--------------------------------------CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCccccccccccC--------------------------------------CCCCCchHHHHHHHHHHHHHHHH
Confidence 21 1112334443332211 135789999999999999987 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccc--cchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDL--KTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
.+++++|+||+.|+|+...+. |..+. +....++..+..+.. ...++++...+++||||+|++++.++....
T Consensus 245 ~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---- 317 (427)
T 4f6c_A 245 NGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLDC-IGVSMAEMPVDFSFVDTTARQIVALAQVNT---- 317 (427)
T ss_dssp TTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSSE-EEHHHHTCEECCEEHHHHHHHHHHHTTSCC----
T ss_pred cCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcCC-CCCccccceEEEeeHHHHHHHHHHHHcCCC----
Confidence 689999999999999876321 22221 123344555544332 112346889999999999999999886322
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
.+++||++++ .+++|.|+++.+.+ ++
T Consensus 318 ~g~~~~l~~~--~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 318 PQIIYHVLSP--NKMPVKSLLECVKR-KE 343 (427)
T ss_dssp CCSEEEESCS--CCEEHHHHHHHHHS-SC
T ss_pred CCCEEEecCC--CCCcHHHHHHHHHH-cC
Confidence 4789999998 89999999999988 44
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-29 Score=256.51 Aligned_cols=248 Identities=15% Similarity=0.107 Sum_probs=181.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..|+|||||||||||++|+++|+++|+ +|+++.|+..... ++. ..+++++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~---~l~------------------------~~~~~~~ 61 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGH---DLVLIHRPSSQIQ---RLA------------------------YLEPECR 61 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECTTSCGG---GGG------------------------GGCCEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecChHhhh---hhc------------------------cCCeEEE
Confidence 446899999999999999999999985 5688999764321 000 1368899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
.+|+++ .+..+.+++++|+|||+||..... +..+..+++|+.|+.+++++|++. ++++|||+||.++++..
T Consensus 62 ~~Dl~d-------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~ 133 (342)
T 2x4g_A 62 VAEMLD-------HAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRH 133 (342)
T ss_dssp ECCTTC-------HHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCC
T ss_pred EecCCC-------HHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcC
Confidence 999994 444568889999999999976542 456678899999999999999997 78999999999999865
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc-CC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK-EN 248 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~-~~ 248 (570)
.+. +.+ +|+.+..+. ....+.|+.||+.+|+++..+. .+
T Consensus 134 ~~~--~~~-~E~~~~~p~-------------------------------------~~~~~~Y~~sK~~~e~~~~~~~~~g 173 (342)
T 2x4g_A 134 PQG--LPG-HEGLFYDSL-------------------------------------PSGKSSYVLCKWALDEQAREQARNG 173 (342)
T ss_dssp TTS--SCB-CTTCCCSSC-------------------------------------CTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCC--CCC-CCCCCCCcc-------------------------------------ccccChHHHHHHHHHHHHHHHhhcC
Confidence 420 011 222222110 0016789999999999998862 38
Q ss_pred CcEEEEeccccccCCC-CCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 249 LSLVIIRPTIVSGTYK-EPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~-~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
++++++||+.|||+.. .+ + ...++..+..|....+ ++...++++++|+|++++.++.... .++
T Consensus 174 ~~~~ilrp~~v~g~~~~~~--~-------~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~----~g~ 237 (342)
T 2x4g_A 174 LPVVIGIPGMVLGELDIGP--T-------TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGR----IGE 237 (342)
T ss_dssp CCEEEEEECEEECSCCSSC--S-------TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSC----TTC
T ss_pred CcEEEEeCCceECCCCccc--c-------HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCC----CCc
Confidence 9999999999999865 21 1 2244555556655444 5678999999999999999987432 167
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+||++++ . +|+.|+++.+.+.+|..
T Consensus 238 ~~~v~~~--~-~s~~e~~~~i~~~~g~~ 262 (342)
T 2x4g_A 238 RYLLTGH--N-LEMADLTRRIAELLGQP 262 (342)
T ss_dssp EEEECCE--E-EEHHHHHHHHHHHHTCC
T ss_pred eEEEcCC--c-ccHHHHHHHHHHHhCCC
Confidence 9999998 6 99999999999998875
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=255.70 Aligned_cols=258 Identities=20% Similarity=0.267 Sum_probs=194.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++++++ .+|+++.|....... +.+. .....++.++.+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~-~~~~---------------------~~~~~~~~~~~~ 61 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNK-ANLE---------------------AILGDRVELVVG 61 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCG-GGTG---------------------GGCSSSEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCCh-hHHh---------------------hhccCCeEEEEC
Confidence 68999999999999999999999433 356888986532111 0100 011257899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
|+++ .+..+.+++++|+|||+||....+ +.++..+++|+.|+.+++++|.+. ++ +|||+||..+|+..
T Consensus 62 Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~ 132 (348)
T 1oc2_A 62 DIAD-------AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDL 132 (348)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCB
T ss_pred CCCC-------HHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCC
Confidence 9994 444568889999999999987543 356778999999999999999988 66 99999999999864
Q ss_pred CC--------eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 170 TG--------LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 170 ~g--------~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
.. ..++.+++|+++. .+.+.|+.||+.+|++
T Consensus 133 ~~~~~~~~~~~~~~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~ 171 (348)
T 1oc2_A 133 PLREDLPGHGEGPGEKFTAETNY-----------------------------------------NPSSPYSSTKAASDLI 171 (348)
T ss_dssp CCGGGSTTTTCSTTSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcCCCCCC-----------------------------------------CCCCccHHHHHHHHHH
Confidence 21 0001223322221 2457899999999999
Q ss_pred HHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHh
Q 008315 242 MQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 242 v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
+..+ ..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|++++.++...
T Consensus 172 ~~~~~~~~gi~~~ilrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 244 (348)
T 1oc2_A 172 VKAWVRSFGVKATISNCSNNYGPYQHI-E------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG 244 (348)
T ss_dssp HHHHHHHHCCEEEEEEECCEESTTCCT-T------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCEEEEeeceeeCCCCCc-c------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC
Confidence 9876 348999999999999986532 1 112345555666766667788899999999999999999988632
Q ss_pred cCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 320 AKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
..+++||++++ .++++.|+++.+.+.++..+
T Consensus 245 ----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 245 ----RMGETYLIGAD--GEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp ----CTTCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred ----CCCCeEEeCCC--CCCCHHHHHHHHHHHhCCCc
Confidence 13689999998 89999999999999988753
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-29 Score=257.82 Aligned_cols=274 Identities=16% Similarity=0.198 Sum_probs=190.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.|+ +|+++.|....... +.+. . +.. ..++.++.+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~---------l~~----------~~~~~~~~~ 57 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI---DLIVFDNLSRKGAT-DNLH-W---------LSS----------LGNFEFVHG 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSTTHH-HHHH-H---------HHT----------TCCCEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC---EEEEEeCCCccCch-hhhh-h---------hcc----------CCceEEEEc
Confidence 6899999999999999999999985 45788885422211 1111 1 110 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCce-EEEEEeccccc
Q 008315 93 DISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLK-VFVHVSTAYVA 166 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-~fV~vSTa~v~ 166 (570)
|+++ .+..+.++++ +|+|||+||....+ +.++..+++|+.|+.+++++|++. +++ +|||+||.++|
T Consensus 58 Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~ 129 (347)
T 1orr_A 58 DIRN-------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVY 129 (347)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGG
T ss_pred CCCC-------HHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHh
Confidence 9994 4444577777 99999999986542 467788999999999999999987 565 99999999999
Q ss_pred CCCCC-eecccc--CCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 167 GERTG-LILENP--LDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 167 ~~~~g-~i~E~~--~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
+...+ ...|.. +....... ..+|+. ...+.+.|+.||+.+|++++
T Consensus 130 g~~~~~~~~e~~~~~~~~~~~~------------------~~~e~~--------------~~~~~~~Y~~sK~~~E~~~~ 177 (347)
T 1orr_A 130 GDLEQYKYNETETRYTCVDKPN------------------GYDEST--------------QLDFHSPYGCSKGAADQYML 177 (347)
T ss_dssp TTCTTSCEEECSSCEEETTCTT------------------CBCTTS--------------CCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCcCCccccccccccccccc------------------CccccC--------------CCCCCCchHHHHHHHHHHHH
Confidence 86432 121210 00000000 000000 01345789999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCC-----CceeecCCCceeecchHHHHHHHHHHHH
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGN-----LPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~-----~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
.+ ..+++++++||+.|||+...+.. +. .....++..+..|. ....+++++...++++++|+|++++.++
T Consensus 178 ~~~~~~gi~~~ilrp~~v~g~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~ 253 (347)
T 1orr_A 178 DYARIFGLNTVVFRHSSMYGGRQFATY---DQ-GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL 253 (347)
T ss_dssp HHHHHHCCEEEEEEECCEECTTCCCBT---TB-CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHhCCcEEEEccCceeCcCCCCCC---cC-cHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHH
Confidence 86 34899999999999998653311 00 11223344444443 3346788899999999999999999988
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
..... ..+++||++++..+++|+.|+++.+.+.++..+
T Consensus 254 ~~~~~--~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 254 ANVSK--IRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp HTHHH--HTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred hcccc--CCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 63111 126799999873236999999999999988753
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-28 Score=252.29 Aligned_cols=257 Identities=17% Similarity=0.140 Sum_probs=192.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|||||||||||++|+++|+++|+ +|+++.|+...... +++. .+ . ...++.++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~~ 68 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGY---RVHGLVARRSSDTR-WRLR-EL-------------G------IEGDIQYE 68 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-HHHH-HT-------------T------CGGGEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCC---eEEEEeCCCccccc-cchh-hc-------------c------ccCceEEE
Confidence 468999999999999999999999985 56899997654221 1111 00 0 02468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCc-eEEEEEeccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKL-KVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-k~fV~vSTa~ 164 (570)
.+|+++ .+..+.++++ +|+|||+||.... .+.+...+++|+.|+.+++++|++. ++ ++|||+||.+
T Consensus 69 ~~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~ 140 (335)
T 1rpn_A 69 DGDMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSE 140 (335)
T ss_dssp ECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGG
T ss_pred ECCCCC-------HHHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHH
Confidence 999994 3434566664 6999999998664 2467788999999999999999987 65 8999999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+|+...+ .+++|+.+. .+.+.|+.||+.+|.++..
T Consensus 141 v~g~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~ 175 (335)
T 1rpn_A 141 MFGLIQA----ERQDENTPF-----------------------------------------YPRSPYGVAKLYGHWITVN 175 (335)
T ss_dssp GGCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred HhCCCCC----CCCCcccCC-----------------------------------------CCCChhHHHHHHHHHHHHH
Confidence 9986532 223332222 2457899999999999987
Q ss_pred h--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCc-eeecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 245 S--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLP-CLVGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
+ ..+++++++||+.+||+...+ ++.. .....++..+..|... ...++++...++++|+|+|++++.++...
T Consensus 176 ~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-- 249 (335)
T 1rpn_A 176 YRESFGLHASSGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD-- 249 (335)
T ss_dssp HHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS--
T ss_pred HHHHcCCcEEEEeeCcccCCCCCC--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC--
Confidence 6 348999999999999986421 1111 1233445556667643 45688899999999999999999988632
Q ss_pred CCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 322 ~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. +++||++++ .++|+.|+++.+.+.+|..
T Consensus 250 -~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 250 -K--ADDYVVATG--VTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp -S--CCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred -C--CCEEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 1 478999998 8999999999999998864
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=257.29 Aligned_cols=278 Identities=14% Similarity=0.187 Sum_probs=191.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHH-HhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLLIRAADTES------AALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll-~~g~~V~~i~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++|+|||||||||||++|+++|+ +.|+ +|+++.|...... ..+.+.+. +++..+. ..
T Consensus 1 s~m~vlVTGatG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~----~~ 64 (397)
T 1gy8_A 1 SHMRVLVCGGAGYIGSHFVRALLRDTNH---SVVIVDSLVGTHGKSDHVETRENVARK---------LQQSDGP----KP 64 (397)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCC---EEEEEECCTTTTTCCTTSCCHHHHHHH---------HHHSCSS----CC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhCCC---EEEEEecCCcccccccccchHHHHHHH---------HHHhhcc----cc
Confidence 35799999999999999999999 8885 5678888754320 01222110 0100000 00
Q ss_pred cCc---eEEEEccCCCCCCCCChhhhHHHHhC--C-ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCc
Q 008315 84 SEK---ITFVAGDISSEDLGLKDSNLKEELWN--E-LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKL 154 (570)
Q Consensus 84 ~~k---v~~v~gDl~~~~lgls~~~~~~~l~~--~-vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (570)
..+ +.++.+|+++ .+..+.+++ + +|+|||+||..... +.++..+++|+.|+.+++++|++. ++
T Consensus 65 ~~~~~~~~~~~~Dl~d-------~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~ 136 (397)
T 1gy8_A 65 PWADRYAALEVGDVRN-------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KC 136 (397)
T ss_dssp TTTTCCCEEEESCTTC-------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred ccCCceEEEEECCCCC-------HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CC
Confidence 023 8999999995 443456665 5 99999999987643 467788999999999999999987 78
Q ss_pred eEEEEEecccccCCCCC-ee--ccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 155 KVFVHVSTAYVAGERTG-LI--LENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g-~i--~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++|||+||+++++.... .. +..+++|+.+. .+.+.|
T Consensus 137 ~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~-----------------------------------------~p~~~Y 175 (397)
T 1gy8_A 137 DKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKK-----------------------------------------SPESPY 175 (397)
T ss_dssp CEEEEEEEGGGTBSCCC-----CCCCBCTTSCC-----------------------------------------BCSSHH
T ss_pred CEEEEECCHHHhCCCCcccccccccCcCccCCC-----------------------------------------CCCCch
Confidence 99999999999976431 00 01122222221 245789
Q ss_pred HHHHHHHHHHHHHh--cCCCcEEEEeccccccCCCCCCCCccc-cccchHHHHH-----HHhcCCC------------ce
Q 008315 232 VFTKTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVE-DLKTINALFV-----ASAQGNL------------PC 291 (570)
Q Consensus 232 ~~sK~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~-~~~~~~~~i~-----~~~~G~~------------~~ 291 (570)
+.||+.+|+++..+ ..+++++++||+.|||+......|... ........+. .+..|.. ..
T Consensus 176 ~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (397)
T 1gy8_A 176 GESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMP 255 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCce
Confidence 99999999999876 238999999999999987543333221 1122223333 4445532 23
Q ss_pred eec------CCCceeecchHHHHHHHHHHHHHHhcCCC--CCC---ceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 292 LVG------ETKTIMDVIPVDMVVNAMIVAMVAHAKQP--SDA---NIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 292 ~~~------~~~~~~d~VpVDdva~aii~a~~~~~~~~--~~~---~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++ +++...++|||+|+|++++.++....... ..+ ++||++++ .++|+.|+++.+.+.++..
T Consensus 256 ~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 328 (397)
T 1gy8_A 256 IFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHP 328 (397)
T ss_dssp EECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCC
T ss_pred eecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhCCC
Confidence 444 67889999999999999999887532211 013 79999988 8999999999999998864
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=254.28 Aligned_cols=252 Identities=17% Similarity=0.110 Sum_probs=185.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRV--QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~--g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+|+|||||||||||++|+++|++. |++ |+++.|+..... +. +++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~~----~~-------------------------~~~~~ 49 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTEN---VIASDIRKLNTD----VV-------------------------NSGPF 49 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGG---EEEEESCCCSCH----HH-------------------------HSSCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCE---EEEEcCCCcccc----cc-------------------------CCCce
Confidence 478999999999999999999998 754 578888765421 11 24678
Q ss_pred EEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc--ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF--DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .......+++|+.|+.+++++|++. ++++|||+||.++
T Consensus 50 ~~~D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~ 121 (312)
T 2yy7_A 50 EVVNALD-------FNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAV 121 (312)
T ss_dssp EECCTTC-------HHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGG
T ss_pred EEecCCC-------HHHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHH
Confidence 9999994 444456776 89999999997643 2456778999999999999999987 7899999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
++...+ ..+.+|+.+. .+.+.|+.||+.+|+++..+
T Consensus 122 ~~~~~~---~~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 122 FGPTTP---KENTPQYTIM-----------------------------------------EPSTVYGISKQAGERWCEYY 157 (312)
T ss_dssp CCTTSC---SSSBCSSCBC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCCC---CCCccccCcC-----------------------------------------CCCchhHHHHHHHHHHHHHH
Confidence 986431 0112221111 34678999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...|..+.. ......+.....+.....+++++...++++|+|+|++++.++.......
T Consensus 158 ~~~~~~~~~~lrp~~v~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~ 234 (312)
T 2yy7_A 158 HNIYGVDVRSIRYPGLISWSTPPGGGTT---DYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKI 234 (312)
T ss_dssp HHHHCCEEECEEECEEECSSSCCCSCTT---THHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGC
T ss_pred HHhcCCcEEEEeCCeEecCCCCCCCchh---hhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccccc
Confidence 34899999999999998654432211 1122333333333333456778889999999999999999887432211
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
..+++||+++ .++|+.|+++.+.+.++
T Consensus 235 ~~~~~~ni~~---~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 235 KIHSSYNLAA---MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp CCSSCEECCS---EEECHHHHHHHHHTTCT
T ss_pred ccCceEEeCC---CccCHHHHHHHHHHHCC
Confidence 1247999985 58999999999999876
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=254.66 Aligned_cols=235 Identities=13% Similarity=0.055 Sum_probs=179.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+||||| +||||++|+++|+++|++ |+++.|+.... ..+++++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~---V~~~~r~~~~~-------------------------------~~~~~~~ 46 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHE---VTGLRRSAQPM-------------------------------PAGVQTL 46 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCC---EEEEECTTSCC-------------------------------CTTCCEE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCE---EEEEeCCcccc-------------------------------ccCCceE
Confidence 568999999 599999999999999975 47888875431 2568899
Q ss_pred EccCCCCCCCCChhhhHHHHhCC-ccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNE-LDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~-vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
.+|++++ ++ .+.++++ +|+|||+||... ...+..+++|+.|+.+++++|++. ++++|||+||+.+|+..
T Consensus 47 ~~Dl~d~------~~-~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~ 116 (286)
T 3gpi_A 47 IADVTRP------DT-LASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQE 116 (286)
T ss_dssp ECCTTCG------GG-CTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCC
T ss_pred EccCCCh------HH-HHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCC
Confidence 9999953 23 3456666 999999999743 445667899999999999999986 88999999999999875
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
.+ .+++|+.+. .+.+.|+.||+.+|++ .++ +
T Consensus 117 ~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~-~~~---~ 147 (286)
T 3gpi_A 117 VE----EWLDEDTPP-----------------------------------------IAKDFSGKRMLEAEAL-LAA---Y 147 (286)
T ss_dssp CS----SEECTTSCC-----------------------------------------CCCSHHHHHHHHHHHH-GGG---S
T ss_pred CC----CCCCCCCCC-----------------------------------------CCCChhhHHHHHHHHH-Hhc---C
Confidence 42 223332322 3468899999999999 664 9
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++|+||+.|||+... .++..+.. ....++++...++|+++|+|++++.++..... ...+++|
T Consensus 148 ~~~ilR~~~v~G~~~~-------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~ 210 (286)
T 3gpi_A 148 SSTILRFSGIYGPGRL-------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSH-AVPERLY 210 (286)
T ss_dssp SEEEEEECEEEBTTBC-------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTT-SCCCSEE
T ss_pred CeEEEecccccCCCch-------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHhhhcc-CCCCceE
Confidence 9999999999997652 22233332 22347788899999999999999999886421 2237899
Q ss_pred EeccCCCCcccHHhHHHHHhhhcccCCCC
Q 008315 330 HVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~~~~~~~p~~ 358 (570)
|++++ .++|+.|+++.+.+.+|..+..
T Consensus 211 ~~~~~--~~~s~~e~~~~i~~~~g~~~~~ 237 (286)
T 3gpi_A 211 IVTDN--QPLPVHDLLRWLADRQGIAYPA 237 (286)
T ss_dssp EECCS--CCEEHHHHHHHHHHHTTCCCCC
T ss_pred EEeCC--CCCCHHHHHHHHHHHcCCCCCC
Confidence 99998 8999999999999999876533
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=255.61 Aligned_cols=250 Identities=15% Similarity=0.203 Sum_probs=188.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|||||||||||++|+++|+++| +. |+++.|....... +. ..++.
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~-~~--------------------------~~~~~ 93 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF-VN--------------------------LVDLN 93 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCC---EEEEECCSSGGGG-GG--------------------------TTTSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcE---EEEEecCCCcchh-hc--------------------------ccCce
Confidence 467999999999999999999999998 55 4678886543210 00 01223
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-----CccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-----ELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-----~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
+.+|++ +.+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.+++++|++. ++ +|||+||
T Consensus 94 -~~~d~~-------~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS 163 (357)
T 2x6t_A 94 -IADYMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASS 163 (357)
T ss_dssp -CSEEEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEE
T ss_pred -EeeecC-------cHHHHHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcc
Confidence 678888 5555557776 59999999998754 3567888999999999999999987 67 9999999
Q ss_pred ccccCCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 163 AYVAGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 163 a~v~~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
..+++...+ .++|. .+. .+.+.|+.||+.+|++
T Consensus 164 ~~v~g~~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~E~~ 197 (357)
T 2x6t_A 164 AATYGGRTSDFIESR-----EYE-----------------------------------------KPLNVFGYSKFLFDEY 197 (357)
T ss_dssp GGGGCSCSSCCCSSG-----GGC-----------------------------------------CCSSHHHHHHHHHHHH
T ss_pred hHHhCCCCCCCcCCc-----CCC-----------------------------------------CCCChhHHHHHHHHHH
Confidence 999986432 22222 111 3467899999999999
Q ss_pred HHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCc-eeecchHHHHHHHHHHHHHH
Q 008315 242 MQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKT-IMDVIPVDMVVNAMIVAMVA 318 (570)
Q Consensus 242 v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~-~~d~VpVDdva~aii~a~~~ 318 (570)
+..+ ..+++++++||+.|||+...+.. ... .....++..+..|....+.++++. ..++++|+|+|++++.++..
T Consensus 198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~ 274 (357)
T 2x6t_A 198 VRQILPEANSQIVGFRYFNVYGPREGHKG-SMA--SVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274 (357)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCTTCG-GGS--CHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCeEECCCCCCCc-ccc--hHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc
Confidence 9887 34799999999999998754311 111 123345556666766667788888 99999999999999998874
Q ss_pred hcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 319 ~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.. +++||++++ .++|+.|+++.+.+.++..
T Consensus 275 ~~-----~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 275 GV-----SGIFNLGTG--RAESFQAVADATLAYHKKG 304 (357)
T ss_dssp CC-----CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred CC-----CCeEEecCC--CcccHHHHHHHHHHHcCCC
Confidence 32 679999998 8999999999999998875
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=257.73 Aligned_cols=244 Identities=16% Similarity=0.134 Sum_probs=180.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccc-ccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSF-ISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~-~~~kv~~ 89 (570)
.+++|||||||||||++|+++|++.|++ |+++.|+....... ....... ...++++
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~--------------------~~~~~~~~~~~~~~~ 62 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEE---VTVLDDLRVPPMIP--------------------PEGTGKFLEKPVLEL 62 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCC---EEEECCCSSCCSSC--------------------CTTSSEEECSCGGGC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCE---EEEEecCCcccccc--------------------hhhhhhhccCCCeeE
Confidence 5789999999999999999999999965 57889876521000 0000000 0122233
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|++ ++|+|||+||..... ......++ |+.|+.+++++|++. ++++|||+||.++|
T Consensus 63 ~~~Dl~-----------------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~ 123 (321)
T 3vps_A 63 EERDLS-----------------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVY 123 (321)
T ss_dssp CHHHHT-----------------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred EeCccc-----------------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHh
Confidence 333322 899999999987632 33344566 999999999999998 79999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+...+ .+++|+.+. .+.+.|+.||+.+|+++..+
T Consensus 124 ~~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 158 (321)
T 3vps_A 124 GQADT----LPTPEDSPL-----------------------------------------SPRSPYAASKVGLEMVAGAHQ 158 (321)
T ss_dssp CSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCCCCCCCC-----------------------------------------CCCChhHHHHHHHHHHHHHHH
Confidence 87532 233332322 34689999999999999987
Q ss_pred -cCCC-cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 -KENL-SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 -~~~l-p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..++ +++|+||+.|||+...+ . .....++..+..|....++++++...++|+++|+|++++.++...
T Consensus 159 ~~~~~~~~~ilRp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~---- 227 (321)
T 3vps_A 159 RASVAPEVGIVRFFNVYGPGERP-D------ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP---- 227 (321)
T ss_dssp HSSSSCEEEEEEECEEECTTCCT-T------SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC----
T ss_pred HHcCCCceEEEEeccccCcCCCC-C------ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC----
Confidence 4588 99999999999987643 1 123455566666666677889999999999999999999888532
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
..+ +||++++ .++|+.|+++.+. .+|..+
T Consensus 228 ~~g-~~~i~~~--~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 228 LPS-VVNFGSG--QSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp CCS-EEEESCS--CCEEHHHHHHHHH-TTCTTC
T ss_pred CCC-eEEecCC--CcccHHHHHHHHH-HhCCCC
Confidence 225 9999998 8999999999999 888754
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-28 Score=249.87 Aligned_cols=255 Identities=16% Similarity=0.167 Sum_probs=190.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|++.|+ +|+++.|...+... .+. .+ ....++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~--~~~-~~-------------------~~~~~~~~ 79 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGH---EVTVVDNFFTGRKR--NVE-HW-------------------IGHENFEL 79 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCGG--GTG-GG-------------------TTCTTEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCC---EEEEEeCCCccchh--hhh-hh-------------------ccCCceEE
Confidence 5789999999999999999999999985 46788886543210 000 00 00256899
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+.++. +.++|+|||+||.... .......+++|+.|+.+++++|++. +. +|||+||+++|
T Consensus 80 ~~~D~~~~~------------~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 145 (343)
T 2b69_A 80 INHDVVEPL------------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVY 145 (343)
T ss_dssp EECCTTSCC------------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGG
T ss_pred EeCccCChh------------hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHh
Confidence 999998531 3579999999998653 3456778999999999999999987 55 89999999999
Q ss_pred CCCC-CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~~~-g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+... ..++|..+.+..+. .+.+.|+.||+.+|+++..+
T Consensus 146 g~~~~~~~~E~~~~~~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 184 (343)
T 2b69_A 146 GDPEVHPQSEDYWGHVNPI-----------------------------------------GPRACYDEGKRVAETMCYAY 184 (343)
T ss_dssp BSCSSSSBCTTCCCBCCSS-----------------------------------------STTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccccccCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHH
Confidence 8643 23444432211111 23568999999999999875
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+..+ .....++..+..|....++++++...++++|+|+|++++.++.. +
T Consensus 185 ~~~~~~~~~ilrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~----~ 255 (343)
T 2b69_A 185 MKQEGVEVRVARIFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS----N 255 (343)
T ss_dssp HHHHCCCEEEEEECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS----S
T ss_pred HHHhCCcEEEEEEcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc----C
Confidence 358999999999999986543211 12334555666676656778889999999999999999988752 1
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 256 -~~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 285 (343)
T 2b69_A 256 -VSSPVNLGNP--EEHTILEFAQLIKNLVGSGS 285 (343)
T ss_dssp -CCSCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred -CCCeEEecCC--CCCcHHHHHHHHHHHhCCCC
Confidence 2578999998 89999999999999998753
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=249.64 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=173.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+|||||||||||++|+++|+++| +. |+++.|....... +.+ .++. +.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~-~~~--------------------------~~~~-~~~ 49 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITD---ILVVDNLKDGTKF-VNL--------------------------VDLN-IAD 49 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCC---EEEEECCSSGGGG-HHH--------------------------HTSC-CSE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcE---EEEEccCCCCchh-hhc--------------------------Ccce-ecc
Confidence 48999999999999999999998 54 4788887654211 111 1122 678
Q ss_pred cCCCCCCCCChhhhHHHHhCC-----ccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 93 DISSEDLGLKDSNLKEELWNE-----LDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~-----vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
|++ +.+..+.++++ +|+|||+||.... .+..+..+++|+.|+.+++++|++. ++ +|||+||.+++
T Consensus 50 d~~-------~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 120 (310)
T 1eq2_A 50 YMD-------KEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATY 120 (310)
T ss_dssp EEE-------HHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGG
T ss_pred ccc-------cHHHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHh
Confidence 888 55555677764 9999999998754 3567888999999999999999987 77 99999999999
Q ss_pred CCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+...+ .++|. .+. .+.+.|+.||+.+|+++..+
T Consensus 121 g~~~~~~~~E~-----~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~ 154 (310)
T 1eq2_A 121 GGRTSDFIESR-----EYE-----------------------------------------KPLNVYGYSKFLFDEYVRQI 154 (310)
T ss_dssp TTCCSCBCSSG-----GGC-----------------------------------------CCSSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCC-----CCC-----------------------------------------CCCChhHHHHHHHHHHHHHH
Confidence 86532 22332 111 34678999999999999886
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCc-eeecchHHHHHHHHHHHHHHhcCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKT-IMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~-~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++++||+.|||+...+.... ......++..+..|....++++++. ..++++|+|+|++++.++....
T Consensus 155 ~~~~g~~~~~lrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-- 229 (310)
T 1eq2_A 155 LPEANSQIVGFRYFNVYGPREGHKGSM---ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-- 229 (310)
T ss_dssp GGGCSSCEEEEEECEEESSSCGGGGGG---SCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHcCCCEEEEeCCcEECcCCCCCCcc---chHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence 3479999999999999865321100 0123345555666665556778888 9999999999999999887432
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++||++++ .++|+.|+++.+.+.++..
T Consensus 230 ---~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 230 ---SGIFNLGTG--RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp ---CEEEEESCS--CCBCHHHHHHHC-------
T ss_pred ---CCeEEEeCC--CccCHHHHHHHHHHHcCCC
Confidence 679999998 8999999999999988764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-28 Score=245.93 Aligned_cols=248 Identities=20% Similarity=0.219 Sum_probs=186.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|++ |+++.|....... ....++.++.+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~---------------------------~~~~~~~~~~~ 50 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLE---VAVLDNLATGKRE---------------------------NVPKGVPFFRV 50 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCE---EEEECCCSSCCGG---------------------------GSCTTCCEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCE---EEEEECCCcCchh---------------------------hcccCeEEEEC
Confidence 47999999999999999999999964 4677774332110 00145778999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc-ccc
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA-YVA 166 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa-~v~ 166 (570)
|+++ .+..+.+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++++||++||. .+|
T Consensus 51 Dl~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~ 122 (311)
T 2p5y_A 51 DLRD-------KEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIY 122 (311)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHH
T ss_pred CCCC-------HHHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhc
Confidence 9994 443456666 799999999986532 456778999999999999999987 78999999998 888
Q ss_pred CC-CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 167 GE-RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 167 ~~-~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+. .. ..+++|+.+. .+.+.|+.||+.+|++++.+
T Consensus 123 g~~~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~ 157 (311)
T 2p5y_A 123 GEVPE----GERAEETWPP-----------------------------------------RPKSPYAASKAAFEHYLSVY 157 (311)
T ss_dssp CCCCT----TCCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred CCCCC----CCCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 75 21 1122222221 23578999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceee-----cCCCceeecchHHHHHHHHHHHHHH
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLV-----GETKTIMDVIPVDMVVNAMIVAMVA 318 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~-----~~~~~~~d~VpVDdva~aii~a~~~ 318 (570)
..+++++++||+.|||+...+... . .....++..+..|....+. ++++...++++++|+|++++.++..
T Consensus 158 ~~~~~~~~~~lrp~~v~Gp~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 233 (311)
T 2p5y_A 158 GQSYGLKWVSLRYGNVYGPRQDPHGE--A--GVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS 233 (311)
T ss_dssp HHHHCCCEEEEEECEEECTTCCSSST--T--HHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeeccccCcCCCCCCc--C--cHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence 358999999999999986532110 0 1123344455566655566 7888899999999999999998863
Q ss_pred hcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 319 ~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. +++||++++ .++|+.|+++.+.+.++..
T Consensus 234 ~------~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 262 (311)
T 2p5y_A 234 L------EGIYNVGTG--EGHTTREVLMAVAEAAGKA 262 (311)
T ss_dssp C------CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred C------CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 1 579999998 8999999999999998865
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=251.42 Aligned_cols=280 Identities=15% Similarity=0.140 Sum_probs=192.7
Q ss_pred chhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
++..++++|+|||||||||||++|+++|+++|+ +|+++.|+... .+.+.+ .++... .
T Consensus 4 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---~~~~~~---------~~~~~~--------~ 60 (342)
T 1y1p_A 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGY---KVRGTARSASK---LANLQK---------RWDAKY--------P 60 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHH---------HHHHHS--------T
T ss_pred CcccCCCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCccc---HHHHHH---------HhhccC--------C
Confidence 345678999999999999999999999999986 46788886432 112221 111111 1
Q ss_pred CceEEE-EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 85 EKITFV-AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 85 ~kv~~v-~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
.+++++ .+|++++ +..+.+++++|+|||+||.....+.+...+++|+.|+.+++++|.+..++++|||+||.
T Consensus 61 ~~~~~~~~~D~~d~-------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 61 GRFETAVVEDMLKQ-------GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp TTEEEEECSCTTST-------TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred CceEEEEecCCcCh-------HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 468888 8999953 22346677999999999998777778889999999999999999854478999999999
Q ss_pred cccCCCC-----CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 164 YVAGERT-----GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 164 ~v~~~~~-----g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++++... ..++|..+ .+..... ... . .......+.+.|+.||+.+
T Consensus 134 ~~~~~~~~~~~~~~~~E~~~-----~~~~~~~-~~~---------------------~---~~~~~~~~~~~Y~~sK~~~ 183 (342)
T 1y1p_A 134 VSALIPKPNVEGIYLDEKSW-----NLESIDK-AKT---------------------L---PESDPQKSLWVYAASKTEA 183 (342)
T ss_dssp GGTCCCCTTCCCCEECTTCC-----CHHHHHH-HHH---------------------S---CTTSTTHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCcccCcccc-----Cchhhhh-hcc---------------------c---cccccccchHHHHHHHHHH
Confidence 9985421 23334322 1110000 000 0 0000001236899999999
Q ss_pred HHHHHHhc----CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 239 EMIMQQSK----ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 239 E~~v~~~~----~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
|++++.+. .+++++++||+.|||+...+... . .....++..+..|....+.++. ...++++|+|+|++++.
T Consensus 184 e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~ 258 (342)
T 1y1p_A 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLG 258 (342)
T ss_dssp HHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHH
Confidence 99998762 37999999999999987644211 0 1334556666666654445554 67899999999999999
Q ss_pred HHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++.... ..+..+ ++++ .++|+.|+++.+.+.++..
T Consensus 259 ~~~~~~---~~g~~~-~~~g--~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 259 CLVLPQ---IERRRV-YGTA--GTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHCTT---CCSCEE-EECC--EEECHHHHHHHHHHHCTTS
T ss_pred HHcCcc---cCCceE-EEeC--CCCCHHHHHHHHHHHCCCc
Confidence 886321 124444 3455 6899999999999998864
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=249.08 Aligned_cols=243 Identities=17% Similarity=0.213 Sum_probs=183.3
Q ss_pred CCccchhhhcCCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 008315 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRL 79 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
|.++++.+++++|+|||||||||||++|+++|++. |+ .+|+++.|+... .+.+. ++.+
T Consensus 10 ~~~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r~~~~---~~~~~-------------~~~~--- 68 (344)
T 2gn4_A 10 MSMPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSRDELK---QSEMA-------------MEFN--- 68 (344)
T ss_dssp ------CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEESCHHH---HHHHH-------------HHHC---
T ss_pred CCCccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEECChhh---HHHHH-------------HHhc---
Confidence 44677889999999999999999999999999999 75 366888886322 11111 1111
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
..++.++.+|++ +.+..+.+++++|+|||+||.... .......+++|+.|+.+++++|.+. ++++
T Consensus 69 ----~~~v~~~~~Dl~-------d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~ 136 (344)
T 2gn4_A 69 ----DPRMRFFIGDVR-------DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQ 136 (344)
T ss_dssp ----CTTEEEEECCTT-------CHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred ----CCCEEEEECCCC-------CHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCE
Confidence 257899999999 445456888999999999998652 2456778999999999999999998 7899
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
||++||..++ .+.+.|+.||+
T Consensus 137 ~V~~SS~~~~-----------------------------------------------------------~p~~~Y~~sK~ 157 (344)
T 2gn4_A 137 VIALSTDKAA-----------------------------------------------------------NPINLYGATKL 157 (344)
T ss_dssp EEEECCGGGS-----------------------------------------------------------SCCSHHHHHHH
T ss_pred EEEecCCccC-----------------------------------------------------------CCccHHHHHHH
Confidence 9999996543 12478999999
Q ss_pred HHHHHHHHhc-----CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQSK-----ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~~-----~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
.+|.++..+. .+++++++||+.|+|+... ....++..+..|.......+++..+++++++|+|++
T Consensus 158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----------~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~ 227 (344)
T 2gn4_A 158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----------VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSF 227 (344)
T ss_dssp HHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----------HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----------HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHH
Confidence 9999998864 5799999999999997532 122344445556512223477888999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhc
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~ 352 (570)
++.++... ..+++||++++ ++++.|+++.+.+.+
T Consensus 228 v~~~l~~~----~~g~~~~~~~~---~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 228 VLKSLKRM----HGGEIFVPKIP---SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHHHHC----CSSCEEEECCC---EEEHHHHHHHHCTTC
T ss_pred HHHHHhhc----cCCCEEecCCC---cEEHHHHHHHHHHhC
Confidence 99998743 13679998764 699999999998654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-27 Score=243.92 Aligned_cols=264 Identities=19% Similarity=0.249 Sum_probs=183.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc-ccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT-ESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~-~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|+++|++ |+++.|.... ....+++. +.. ..++.++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~~~~~~~~~~~~~~~-------------~~~--------~~~~~~~~ 56 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHD---VIILDNLCNSKRSVLPVIE-------------RLG--------GKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCTTHHHHHH-------------HHH--------TSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecCCCcchhHHHHHH-------------hhc--------CCcceEEE
Confidence 47999999999999999999999965 4677664332 22222221 000 14678899
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+|+++ .+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||+||+.++
T Consensus 57 ~Dl~~-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~ 128 (338)
T 1udb_A 57 GDIRN-------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTTC-------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred ccCCC-------HHHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHh
Confidence 99994 333445555 599999999976532 345677899999999999999887 78999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+... +.+++|+.+.. ...+.|+.||+.+|++++.+
T Consensus 129 g~~~----~~~~~e~~~~~----------------------------------------~~~~~Y~~sK~~~e~~~~~~~ 164 (338)
T 1udb_A 129 GDNP----KIPYVESFPTG----------------------------------------TPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp CSCC----SSSBCTTSCCC----------------------------------------CCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCCcCcccCCC----------------------------------------CCCChHHHHHHHHHHHHHHHH
Confidence 7642 12222222210 12578999999999999876
Q ss_pred -c-CCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhcCCC--ceeec------CCCceeecchHHHHHHHHH
Q 008315 246 -K-ENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQGNL--PCLVG------ETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 246 -~-~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~G~~--~~~~~------~~~~~~d~VpVDdva~aii 313 (570)
. .+++++++||+.|||+......|-... .......+.....|.. ..+.+ +++...++|+|+|+|++++
T Consensus 165 ~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~ 244 (338)
T 1udb_A 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHV 244 (338)
T ss_dssp HHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHH
T ss_pred HhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHH
Confidence 2 379999999999999853222121110 1122233333333322 22333 5678899999999999999
Q ss_pred HHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.++....... .+++||++++ .++|+.|+++.+.+.++..
T Consensus 245 ~~l~~~~~~~-~~~~yni~~~--~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 245 VAMEKLANKP-GVHIYNLGAG--VGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp HHHHHHTTCC-EEEEEEESCS--CCEEHHHHHHHHHHHHTSC
T ss_pred HHHhhhhccC-CCcEEEecCC--CceeHHHHHHHHHHHhCCC
Confidence 9887432111 1379999988 8999999999999988864
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-28 Score=250.57 Aligned_cols=258 Identities=17% Similarity=0.246 Sum_probs=190.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|++. |+ +|+++.|....... +.+. ++ . ...++.++.
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~---~V~~~~r~~~~~~~-~~~~-~~-----------------~--~~~~~~~~~ 56 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQD---TVVNIDKLTYAGNL-ESLS-DI-----------------S--ESNRYNFEH 56 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSC---EEEEEECCCTTCCG-GGGT-TT-----------------T--TCTTEEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCC---eEEEEecCCCCCch-hhhh-hh-----------------h--cCCCeEEEE
Confidence 47999999999999999999998 54 56788886521111 0110 00 0 024789999
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHc-cCce-------EEE
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKC-VKLK-------VFV 158 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk-------~fV 158 (570)
+|+++ .+..+.+++ ++|+|||+||....+ +.++..+++|+.|+.+++++|.+. .+++ +||
T Consensus 57 ~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv 129 (361)
T 1kew_A 57 ADICD-------SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFH 129 (361)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEE
T ss_pred CCCCC-------HHHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEE
Confidence 99994 444457776 899999999987532 456778999999999999999874 3566 999
Q ss_pred EEecccccCCCCC--eecc----ccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 159 HVSTAYVAGERTG--LILE----NPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 159 ~vSTa~v~~~~~g--~i~E----~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
|+||.++++.... ...+ .+++|+.+. .+.+.|+
T Consensus 130 ~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~-----------------------------------------~~~~~Y~ 168 (361)
T 1kew_A 130 HISTDEVYGDLPHPDEVENSVTLPLFTETTAY-----------------------------------------APSSPYS 168 (361)
T ss_dssp EEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCC-----------------------------------------CCCSHHH
T ss_pred EeCCHHHhCCCcccccccccccCCCCCCCCCC-----------------------------------------CCCCccH
Confidence 9999999986421 0000 022222221 3467899
Q ss_pred HHHHHHHHHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 233 FTKTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 233 ~sK~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
.||+.+|.++..+ ..+++++++||+.|||+...+ . .....++..+..|....++++++...++++++|+|+
T Consensus 169 ~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 241 (361)
T 1kew_A 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-E------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHAR 241 (361)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-T------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc-c------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHH
Confidence 9999999999876 348999999999999987532 1 112345555666665566788889999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++.++... ..+++||++++ .++++.|+++.+.+.++..
T Consensus 242 a~~~~~~~~----~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 242 ALHMVVTEG----KAGETYNIGGH--NEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHHHHHHHC----CTTCEEEECCC--CEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC----CCCCEEEecCC--CeeeHHHHHHHHHHHhCCc
Confidence 999988642 23689999998 8899999999999998875
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-27 Score=246.16 Aligned_cols=258 Identities=16% Similarity=0.132 Sum_probs=190.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++|+++|+++|+ +|+++.|+...... +++. ++ + ...++.+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~~~~~-~~~~-~~-------------~------~~~~~~~ 56 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY---EVYGADRRSGEFAS-WRLK-EL-------------G------IENDVKI 56 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCCSTTTT-HHHH-HT-------------T------CTTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCccccc-ccHh-hc-------------c------ccCceeE
Confidence 3689999999999999999999999985 56888997654321 1222 00 0 0146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCc-eEEEEEecc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKL-KVFVHVSTA 163 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~l-k~fV~vSTa 163 (570)
+.+|+++ .+..+.++++ +|+|||+||.... .+.++..+++|+.|+.+++++|.++ ++ ++|||+||.
T Consensus 57 ~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~ 128 (345)
T 2z1m_A 57 IHMDLLE-------FSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTS 128 (345)
T ss_dssp CCCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEG
T ss_pred EECCCCC-------HHHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEech
Confidence 9999994 4434566664 6999999998654 2467888999999999999999987 66 899999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
++||...+ .+++|+.+. .+.+.|+.||+.+|.+++
T Consensus 129 ~vyg~~~~----~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 163 (345)
T 2z1m_A 129 EMFGKVQE----IPQTEKTPF-----------------------------------------YPRSPYAVAKLFGHWITV 163 (345)
T ss_dssp GGGCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred hhcCCCCC----CCCCccCCC-----------------------------------------CCCChhHHHHHHHHHHHH
Confidence 99986532 223222221 245789999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++|+..++|+.... .+. ......++..+..|.. ....++++...++++++|+|++++.++...
T Consensus 164 ~~~~~~~~~~~~~r~~~~~gpg~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~- 238 (345)
T 2z1m_A 164 NYREAYNMFACSGILFNHESPLRGI--EFV--TRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP- 238 (345)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCT--TSH--HHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS-
T ss_pred HHHHHhCCceEeeeeeeecCCCCCC--cch--hHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC-
Confidence 76 337999999999999975321 111 0112233444555643 346688888999999999999999988521
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. +++||++++ .++++.|+++.+.+.+|..
T Consensus 239 --~--~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 267 (345)
T 2z1m_A 239 --E--PDDYVIATG--ETHTVREFVEKAAKIAGFD 267 (345)
T ss_dssp --S--CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred --C--CceEEEeCC--CCccHHHHHHHHHHHhCCC
Confidence 1 468999998 8999999999999998865
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-27 Score=248.47 Aligned_cols=266 Identities=16% Similarity=0.204 Sum_probs=189.1
Q ss_pred hhcCC---CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 8 EFLEN---KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 8 ~~~~~---k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.|+++ |+|||||||||||++|+++|++.|+ +|+++.|+...... +++. ++ ...+... ..
T Consensus 17 ~~~~~~M~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~l-----~~~~~~~--------~~ 78 (375)
T 1t2a_A 17 KYFQGHMRNVALITGITGQDGSYLAEFLLEKGY---EVHGIVRRSSSFNT-GRIE-HL-----YKNPQAH--------IE 78 (375)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTG-GG-----C----------------
T ss_pred hhhHhhcCcEEEEECCCchHHHHHHHHHHHCCC---EEEEEECCccccch-hhHH-HH-----hhhhccc--------cC
Confidence 34544 5899999999999999999999985 56889997643110 0110 00 0000000 02
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCc---eE
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKL---KV 156 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---k~ 156 (570)
.++.++.+|+++ .+....++++ +|+|||+||..... +.++..+++|+.|+.+++++|.+. ++ ++
T Consensus 79 ~~~~~~~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~ 150 (375)
T 1t2a_A 79 GNMKLHYGDLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVK 150 (375)
T ss_dssp -CEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCE
T ss_pred CCceEEEccCCC-------HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccce
Confidence 468899999994 3334466664 69999999987653 456778999999999999999987 66 79
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
|||+||.++++...+ .+++|+.+. .+.+.|+.||+
T Consensus 151 iv~~SS~~~~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~ 185 (375)
T 1t2a_A 151 FYQASTSELYGKVQE----IPQKETTPF-----------------------------------------YPRSPYGAAKL 185 (375)
T ss_dssp EEEEEEGGGTCSCSS----SSBCTTSCC-----------------------------------------CCCSHHHHHHH
T ss_pred EEEecchhhhCCCCC----CCCCccCCC-----------------------------------------CCCChhHHHHH
Confidence 999999999986431 223332222 23578999999
Q ss_pred HHHHHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCc-eeecCCCceeecchHHHHHHHHH
Q 008315 237 MGEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLP-CLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 237 ~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpVDdva~aii 313 (570)
.+|.++..+ ..+++++++||+.+||+... +++.. .....++..+..|... ...++++...++|+|+|+|++++
T Consensus 186 ~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~--~~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~ 261 (375)
T 1t2a_A 186 YAYWIVVNFREAYNLFAVNGILFNHESPRRG--ANFVT--RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW 261 (375)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSC--TTSHH--HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEecccccCCCCC--CCcch--HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHH
Confidence 999999876 34899999999999998642 12221 1123444455566533 45688899999999999999999
Q ss_pred HHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.++... . .++||++++ .++|+.|+++.+.+.+|..
T Consensus 262 ~~~~~~---~--~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 296 (375)
T 1t2a_A 262 LMLQND---E--PEDFVIATG--EVHSVREFVEKSFLHIGKT 296 (375)
T ss_dssp HHHHSS---S--CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred HHHhcC---C--CceEEEeCC--CcccHHHHHHHHHHHhCCC
Confidence 988632 1 368999998 8999999999999998864
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-28 Score=246.82 Aligned_cols=246 Identities=14% Similarity=0.107 Sum_probs=180.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|||||||||||++|+++|++.|++ |+++.|+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---v~~~~r~~----------------------------------------- 37 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRD----------------------------------------- 37 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTT-----------------------------------------
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCe---EEEEecCc-----------------------------------------
Confidence 4689999999999999999999998864 45555531
Q ss_pred EccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
.+|++ +.+..+.+++ ++|+|||+||.... .......+++|+.|+.+++++|++. ++++|||+||.+
T Consensus 38 ~~D~~-------d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~ 109 (321)
T 1e6u_A 38 ELNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSC 109 (321)
T ss_dssp TCCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGG
T ss_pred cCCcc-------CHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHH
Confidence 25777 3444457777 89999999998752 3466778999999999999999997 789999999999
Q ss_pred ccCCCC-CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC-CchHHHHHHHHHHHH
Q 008315 165 VAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW-PNTYVFTKTMGEMIM 242 (570)
Q Consensus 165 v~~~~~-g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~n~Y~~sK~~aE~~v 242 (570)
+|+... +.++|..... .+. .+ .+.|+.||+.+|+++
T Consensus 110 vyg~~~~~~~~E~~~~~-~~~-----------------------------------------~p~~~~Y~~sK~~~E~~~ 147 (321)
T 1e6u_A 110 IYPKLAKQPMAESELLQ-GTL-----------------------------------------EPTNEPYAIAKIAGIKLC 147 (321)
T ss_dssp GSCTTCCSSBCGGGTTS-SCC-----------------------------------------CGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCcCcccccc-CCC-----------------------------------------CCCCCccHHHHHHHHHHH
Confidence 998643 2233331100 000 11 258999999999999
Q ss_pred HHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHh----cC-CCceeecCCCceeecchHHHHHHHHHHH
Q 008315 243 QQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASA----QG-NLPCLVGETKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 243 ~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~----~G-~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
..+ ..+++++++||+.|||+...+.+.. -.....++..+. .| ....++++++...++|||+|+|++++.+
T Consensus 148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~ 224 (321)
T 1e6u_A 148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSN---SHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHV 224 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEESTTCCCCTTC---SSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEeCCcCCcCCCCCCCC---CccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHH
Confidence 876 3489999999999999876432110 011223333333 34 3334578889999999999999999998
Q ss_pred HHHhcCC-----CCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 316 MVAHAKQ-----PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 316 ~~~~~~~-----~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+...... ...+++||++++ .++|+.|+++.+.+.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 267 (321)
T 1e6u_A 225 MELAHEVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYK 267 (321)
T ss_dssp HHSCHHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred HhCcccccccccccCCceEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 8643210 012579999988 8999999999999998865
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-27 Score=243.00 Aligned_cols=247 Identities=17% Similarity=0.149 Sum_probs=181.8
Q ss_pred EEEEECCccHhHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 14 IILVSGVTGFVAKVFIEKILRV--QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~--g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|||||||||||++|+++|++. |++ |+++.|+.... .++.++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~---V~~~~r~~~~~--------------------------------~~~~~~~ 45 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKN---VIASDIVQRDT--------------------------------GGIKFIT 45 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGG---EEEEESSCCCC--------------------------------TTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCE---EEEecCCCccc--------------------------------cCceEEE
Confidence 4899999999999999999998 654 56777764321 1356789
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc--ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF--DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
+|+++ .+..+.+++ ++|+|||+||.... .+.....+++|+.|+.+++++|++. ++++|||+||..+++
T Consensus 46 ~D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 46 LDVSN-------RDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFG 117 (317)
T ss_dssp CCTTC-------HHHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCC
T ss_pred ecCCC-------HHHHHHHHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhC
Confidence 99994 443456666 89999999997542 2456778999999999999999987 789999999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
.... ..+.+|+++. .+.+.|+.||+.+|+++..+
T Consensus 118 ~~~~---~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 118 PETP---KNKVPSITIT-----------------------------------------RPRTMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp TTSC---SSSBCSSSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CCCccccccC-----------------------------------------CCCchHHHHHHHHHHHHHHHHH
Confidence 6421 1112221221 34689999999999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.+||+...|..+..+ ....++.....+.....+++++...++++|+|+|++++.++.........
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~ 230 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTD---YAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL 230 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSST---HHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchh---HHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence 458999999999999986544332211 12223333333333345677788999999999999999888643221112
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
+++||+++ .++|+.|+++.+.+.++
T Consensus 231 g~~~~i~~---~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 231 RNGYNVTA---YTFTPSELYSKIKERIP 255 (317)
T ss_dssp CSCEECCS---EEECHHHHHHHHHTTCC
T ss_pred CceEecCC---ccccHHHHHHHHHHHCC
Confidence 47999985 47999999999998876
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-27 Score=244.23 Aligned_cols=247 Identities=20% Similarity=0.274 Sum_probs=186.9
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-.+.+++|+|||||||||||++|+++|++.|+ +|+++.|....... .. .. ..
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~-------~~----------------~~--l~ 65 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGH---EILVIDNFATGKRE-------VL----------------PP--VA 65 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTC---EEEEEECCSSSCGG-------GS----------------CS--CT
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCccchh-------hh----------------hc--cC
Confidence 34567899999999999999999999999985 56889996543210 00 00 14
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
++.++.+|+++ .+..+.+++ ++|+|||+||..... +.++ +++|+.|+.+++++|.+. ++++|||+|
T Consensus 66 ~v~~~~~Dl~d-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~S 135 (330)
T 2pzm_A 66 GLSVIEGSVTD-------AGLLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQ 135 (330)
T ss_dssp TEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEE
T ss_pred CceEEEeeCCC-------HHHHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEec
Confidence 68899999994 444457777 899999999987542 2233 899999999999999987 789999999
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|.++++...+. +.+++|+. .+.+.|+.||+.+|++
T Consensus 136 S~~~~~~~~~~--~~~~~E~~-------------------------------------------~~~~~Y~~sK~~~e~~ 170 (330)
T 2pzm_A 136 TALCYGRPATV--PIPIDSPT-------------------------------------------APFTSYGISKTAGEAF 170 (330)
T ss_dssp EGGGGCSCSSS--SBCTTCCC-------------------------------------------CCCSHHHHHHHHHHHH
T ss_pred CHHHhCCCccC--CCCcCCCC-------------------------------------------CCCChHHHHHHHHHHH
Confidence 99999764310 11222211 1357899999999999
Q ss_pred HHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH-HHHHHHHHhc
Q 008315 242 MQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN-AMIVAMVAHA 320 (570)
Q Consensus 242 v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~-aii~a~~~~~ 320 (570)
++.+ +++.+++||+.+||+... .+ ....++..+..|. ...+++. ..++++++|+|+ +++.++..
T Consensus 171 ~~~~--~~~~~~iR~~~v~gp~~~--~~------~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~-- 235 (330)
T 2pzm_A 171 LMMS--DVPVVSLRLANVTGPRLA--IG------PIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEG-- 235 (330)
T ss_dssp HHTC--SSCEEEEEECEEECTTCC--SS------HHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTT--
T ss_pred HHHc--CCCEEEEeeeeeECcCCC--CC------HHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhc--
Confidence 9986 899999999999997531 11 1223444455555 4455666 899999999999 99888752
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+. +++||++++ .++++.|+++.+.+.++..
T Consensus 236 --~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 236 --RP-TGVFNVSTG--EGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp --CC-CEEEEESCS--CCEEHHHHHHHHHHHHTCC
T ss_pred --CC-CCEEEeCCC--CCCCHHHHHHHHHHHhCCC
Confidence 22 789999998 8999999999999998876
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-27 Score=247.01 Aligned_cols=261 Identities=16% Similarity=0.111 Sum_probs=191.4
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCC----ccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPN----VKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~----V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
++++|+|||||||||||++|+++|++.|+. +.+|+++.|....... ...
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------------------------~~~ 63 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------------------------GFS 63 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------------------------TCC
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------------------------ccC
Confidence 468999999999999999999999999831 1356888887543210 012
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHh-CCccEEEEcCccCCc--ccCHHHHHHHHHHHHHHHHHHHHHcc----CceEE
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELW-NELDVMVNSAAITKF--DERYDVAFGINTLGAIHLVNFAKKCV----KLKVF 157 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~-~~vdiVih~Aa~v~f--~~~~~~~~~~Nv~gt~~ll~~a~~~~----~lk~f 157 (570)
.++.++.+|+++ .+..+.++ .++|+|||+||.... .+.+...+++|+.||.+++++|++.. ++++|
T Consensus 64 ~~~~~~~~Dl~d-------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i 136 (342)
T 2hrz_A 64 GAVDARAADLSA-------PGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV 136 (342)
T ss_dssp SEEEEEECCTTS-------TTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CceeEEEcCCCC-------HHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence 568899999995 33344666 589999999997642 24677889999999999999999873 27899
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||..+++... ..+++|+++. .+.+.|+.||+.
T Consensus 137 v~~SS~~~~~~~~----~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~ 171 (342)
T 2hrz_A 137 VFTSSIAVFGAPL----PYPIPDEFHT-----------------------------------------TPLTSYGTQKAI 171 (342)
T ss_dssp EEEEEGGGCCSSC----CSSBCTTCCC-----------------------------------------CCSSHHHHHHHH
T ss_pred EEeCchHhhCCCC----CCCcCCCCCC-----------------------------------------CCcchHHHHHHH
Confidence 9999999998642 1223332322 245789999999
Q ss_pred HHHHHHHh--cCCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 238 GEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 238 aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+|+++.++ ..+++.+++|++.|+|.. |+... ......++.....|....++++++...++++++|+|++++
T Consensus 172 ~e~~~~~~~~~~~~~~~~ir~~~v~g~p-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~ 246 (342)
T 2hrz_A 172 CELLLSDYSRRGFFDGIGIRLPTICIRP-----GKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLI 246 (342)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECEETTCC-----SSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceeEEeeeEEecC-----CCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHH
Confidence 99999887 346899999999999831 22111 1123345555666766556677778889999999999999
Q ss_pred HHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.++.........+++||++ + .++|+.|+++.+.+.++..+
T Consensus 247 ~~~~~~~~~~~~~~~~ni~-g--~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 247 HGAMIDVEKVGPRRNLSMP-G--LSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp HHHHSCHHHHCSCCEEECC-C--EEEEHHHHHHHHHHHHCHHH
T ss_pred HHHhccccccCCccEEEcC-C--CCCCHHHHHHHHHHHcCccc
Confidence 9886322100125799995 4 67999999999999887653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-27 Score=244.79 Aligned_cols=244 Identities=23% Similarity=0.245 Sum_probs=180.8
Q ss_pred chhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 5 SVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 5 ~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+....+++|+|||||||||||++|+++|++.|+ +|+++.|...... +.+. . .
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~--~~l~---------------------~--~ 65 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGD---KVVGIDNFATGRR--EHLK---------------------D--H 65 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCG--GGSC---------------------C--C
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCCccch--hhHh---------------------h--c
Confidence 345567899999999999999999999999985 5688898754321 0000 0 1
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
.++.++.+|+++ .+..+.++++ +|+|||+||..... +.+. +++|+.|+.+++++|.+. ++++||++
T Consensus 66 ~~~~~~~~Dl~d-------~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~ 135 (333)
T 2q1w_A 66 PNLTFVEGSIAD-------HALVNQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYF 135 (333)
T ss_dssp TTEEEEECCTTC-------HHHHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEE
T ss_pred CCceEEEEeCCC-------HHHHHHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEE
Confidence 468899999994 4444577776 99999999987552 2222 899999999999999987 78999999
Q ss_pred ecccccC----CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC-chHHHHH
Q 008315 161 STAYVAG----ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP-NTYVFTK 235 (570)
Q Consensus 161 STa~v~~----~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-n~Y~~sK 235 (570)
||.++++ ...+ +++|++ .+. +.|+.||
T Consensus 136 SS~~~~g~~~~~~~~-----~~~E~~-------------------------------------------~p~~~~Y~~sK 167 (333)
T 2q1w_A 136 QTALCYGVKPIQQPV-----RLDHPR-------------------------------------------NPANSSYAISK 167 (333)
T ss_dssp EEGGGGCSCCCSSSB-----CTTSCC-------------------------------------------CCTTCHHHHHH
T ss_pred CcHHHhCCCcccCCC-----CcCCCC-------------------------------------------CCCCCchHHHH
Confidence 9999997 3321 222211 123 7899999
Q ss_pred HHHHHHHHH-hcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 236 TMGEMIMQQ-SKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 236 ~~aE~~v~~-~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
+.+|+++.. +. +++++||+.|||+... .+ ....++..+..|. .+++ ++...++++++|+|++++.
T Consensus 168 ~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--~~------~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~ 233 (333)
T 2q1w_A 168 SANEDYLEYSGL---DFVTFRLANVVGPRNV--SG------PLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR 233 (333)
T ss_dssp HHHHHHHHHHTC---CEEEEEESEEESTTCC--SS------HHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHhhhC---CeEEEeeceEECcCCc--Cc------HHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence 999999988 65 8999999999997621 11 1223444555565 3445 6778999999999999998
Q ss_pred HHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++.. +. +++||++++ .++++.|+++.+.+.++..
T Consensus 234 ~~~~----~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 234 AVDG----VG-HGAYHFSSG--TDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HHTT----CC-CEEEECSCS--CCEEHHHHHHHHHHHTTCS
T ss_pred HHhc----CC-CCEEEeCCC--CCccHHHHHHHHHHHhCCC
Confidence 8852 22 689999998 8999999999999998875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=239.75 Aligned_cols=225 Identities=19% Similarity=0.242 Sum_probs=175.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ +|+++.|. .+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------------------------~~ 40 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY---DIYPFDKK------------------------------------------LL 40 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE---EEEEECTT------------------------------------------TS
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC---EEEEeccc------------------------------------------cc
Confidence 3899999999999999999999885 45777761 25
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|++ +.+..+.+++ ++|+|||+||..... +.+...+++|+.|+.+++++|++. ++ +|||+||.++|+
T Consensus 41 D~~-------d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~ 111 (287)
T 3sc6_A 41 DIT-------NISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQ 111 (287)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSC
T ss_pred CCC-------CHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcC
Confidence 777 3444456666 699999999987654 467888999999999999999998 55 699999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
... ..+++|+++. .+.+.|+.||+.+|++++.+..
T Consensus 112 ~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 112 GDR----PEGYDEFHNP-----------------------------------------APINIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp CCC----SSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHCS
T ss_pred CCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHhCC
Confidence 653 2334333332 3467899999999999998644
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++||+.|||+... + ....++.....|....+.+ +...++++++|+|++++.++... . ++
T Consensus 147 --~~~ilR~~~v~G~~~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~----~-~~ 208 (287)
T 3sc6_A 147 --KYFIVRTSWLYGKYGN---N------FVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTS----L-YG 208 (287)
T ss_dssp --SEEEEEECSEECSSSC---C------HHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSC----C-CE
T ss_pred --CcEEEeeeeecCCCCC---c------HHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCC----C-CC
Confidence 7899999999997542 1 2234455555565444554 48899999999999999988622 2 57
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||++++ .++|+.|+++.+.+.+|..+
T Consensus 209 ~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 235 (287)
T 3sc6_A 209 TYHVSNT--GSCSWFEFAKKIFSYANMKV 235 (287)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHTCCC
T ss_pred eEEEcCC--CcccHHHHHHHHHHHcCCCc
Confidence 9999998 89999999999999998764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=244.14 Aligned_cols=240 Identities=18% Similarity=0.108 Sum_probs=157.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|+++|+ +|+++.|+... ++ ++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~---------------------------------~~--~~~ 43 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW---HAVGCGFRRAR---------------------------------PK--FEQ 43 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEC---------------------------------------------
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC---eEEEEccCCCC---------------------------------CC--eEE
Confidence 58999999999999999999999985 45788875321 11 567
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+|++++ ++. +.+++ ++|+|||+||..... +.++..+++|+.|+.+++++|.+. +. +|||+||.+++
T Consensus 44 ~Dl~d~------~~~-~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~ 114 (315)
T 2ydy_A 44 VNLLDS------NAV-HHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVF 114 (315)
T ss_dssp --------------C-HHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGS
T ss_pred ecCCCH------HHH-HHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHc
Confidence 898853 232 35555 499999999986542 456778999999999999999987 55 89999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 246 (570)
+...+.++| +++. .+.+.|+.||+.+|+++..+
T Consensus 115 ~~~~~~~~E-----~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~- 147 (315)
T 2ydy_A 115 DGTNPPYRE-----EDIP-----------------------------------------APLNLYGKTKLDGEKAVLEN- 147 (315)
T ss_dssp CSSSCSBCT-----TSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH-
T ss_pred CCCCCCCCC-----CCCC-----------------------------------------CCcCHHHHHHHHHHHHHHHh-
Confidence 864333333 2222 24578999999999999985
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHh-cCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASA-QGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~-~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
+++++++||+.|||+...+..+++. .++.... .|....+. ++...++++++|+|++++.++.........
T Consensus 148 -~~~~~~lR~~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ 218 (315)
T 2ydy_A 148 -NLGAAVLRIPILYGEVEKLEESAVT------VMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSI 218 (315)
T ss_dssp -CTTCEEEEECSEECSCSSGGGSTTG------GGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTC
T ss_pred -CCCeEEEeeeeeeCCCCcccccHHH------HHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCC
Confidence 4678999999999987643222222 2233333 45433333 467889999999999999988754111123
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 219 ~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 247 (315)
T 2ydy_A 219 KGTFHWSGN--EQMTKYEMACAIADAFNLPS 247 (315)
T ss_dssp CEEEECCCS--CCBCHHHHHHHHHHHTTCCC
T ss_pred CCeEEEcCC--CcccHHHHHHHHHHHhCCCh
Confidence 689999998 89999999999999988764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-27 Score=239.41 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=170.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|++| ++++|++... + +..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V---~~l~R~~~~~---------------------------------~---~~~ 41 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEV---TLVSRKPGPG---------------------------------R---ITW 41 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE---EEEESSCCTT---------------------------------E---EEH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEE---EEEECCCCcC---------------------------------e---eec
Confidence 689999999999999999999999755 7888864321 1 111
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC------ccc-CHHHHHHHHHHHHHHHHHHHHHcc-CceEEEEEeccc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK------FDE-RYDVAFGINTLGAIHLVNFAKKCV-KLKVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~------f~~-~~~~~~~~Nv~gt~~ll~~a~~~~-~lk~fV~vSTa~ 164 (570)
| +.....++++|+|||+|+..- +++ ..+..++.|+.||.+++++++..+ +.+.||++||++
T Consensus 42 ~-----------~~~~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~ 110 (298)
T 4b4o_A 42 D-----------ELAASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA 110 (298)
T ss_dssp H-----------HHHHHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG
T ss_pred c-----------hhhHhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee
Confidence 1 111245578999999998531 122 234567899999999999999873 345699999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+|++..+ .+..|+++. ...+.|..+|...|.....
T Consensus 111 vyg~~~~----~~~~E~~p~-----------------------------------------~~~~~~~~~~~~~e~~~~~ 145 (298)
T 4b4o_A 111 YYQPSLT----AEYDEDSPG-----------------------------------------GDFDFFSNLVTKWEAAARL 145 (298)
T ss_dssp GSCCCSS----CCBCTTCCC-----------------------------------------SCSSHHHHHHHHHHHHHCC
T ss_pred eecCCCC----CcccccCCc-----------------------------------------cccchhHHHHHHHHHHHHh
Confidence 9997642 223332322 2345678888888876555
Q ss_pred hcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 245 SKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 245 ~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
...+++++++||+.|||+.. |+ ...++.....|.. ...++++...++|||||+|++++.++....
T Consensus 146 ~~~~~~~~~~r~~~v~g~~~----~~------~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~---- 210 (298)
T 4b4o_A 146 PGDSTRQVVVRSGVVLGRGG----GA------MGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANH---- 210 (298)
T ss_dssp SSSSSEEEEEEECEEECTTS----HH------HHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTT----
T ss_pred hccCCceeeeeeeeEEcCCC----Cc------hhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCC----
Confidence 56789999999999999753 22 2233444444543 455899999999999999999999887322
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
...+||++++ +++|+.|+++.+.+.++++.
T Consensus 211 ~~g~yn~~~~--~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 211 VHGVLNGVAP--SSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp CCEEEEESCS--CCCBHHHHHHHHHHHHTCCC
T ss_pred CCCeEEEECC--CccCHHHHHHHHHHHhCcCC
Confidence 2469999998 99999999999999998753
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=236.19 Aligned_cols=224 Identities=16% Similarity=0.158 Sum_probs=173.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||| ||||++|+++|+++|+ +|++++|+.... +.+. ..+++++.+
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~---~V~~~~r~~~~~---~~~~------------------------~~~~~~~~~ 54 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGW---RIIGTSRNPDQM---EAIR------------------------ASGAEPLLW 54 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTC---EEEEEESCGGGH---HHHH------------------------HTTEEEEES
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCC---EEEEEEcChhhh---hhHh------------------------hCCCeEEEe
Confidence 79999998 9999999999999986 468899975432 1111 256899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEEecccccCCCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g 171 (570)
|+++. + ++++|+|||+||.....++ .+.+++++|++. .++++|||+||+++|+...+
T Consensus 55 D~~d~-------~-----~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~ 112 (286)
T 3ius_A 55 PGEEP-------S-----LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDG 112 (286)
T ss_dssp SSSCC-------C-----CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTT
T ss_pred ccccc-------c-----cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecceecCCCCC
Confidence 99952 1 5789999999998765432 357889999884 38899999999999987543
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcE
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~ 251 (570)
.+++|+.+. .+.+.|+.||+.+|+++.++ .++++
T Consensus 113 ----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~-~~~~~ 146 (286)
T 3ius_A 113 ----AWVDETTPL-----------------------------------------TPTAARGRWRVMAEQQWQAV-PNLPL 146 (286)
T ss_dssp ----CEECTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHS-TTCCE
T ss_pred ----CCcCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHhh-cCCCE
Confidence 223332322 34578999999999999997 68999
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
+|+||+.|||+...++. .+..|....+.++ +...++|+++|+|++++.++.... .+++||+
T Consensus 147 ~ilRp~~v~G~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~~i 207 (286)
T 3ius_A 147 HVFRLAGIYGPGRGPFS--------------KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD----PGAVYNV 207 (286)
T ss_dssp EEEEECEEEBTTBSSST--------------TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC----TTCEEEE
T ss_pred EEEeccceECCCchHHH--------------HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC----CCCEEEE
Confidence 99999999998764422 1223444455544 578899999999999999987332 3679999
Q ss_pred ccCCCCcccHHhHHHHHhhhcccCC
Q 008315 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 332 ~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++ .++|+.|+++.+.+.+|..+
T Consensus 208 ~~~--~~~s~~e~~~~i~~~~g~~~ 230 (286)
T 3ius_A 208 CDD--EPVPPQDVIAYAAELQGLPL 230 (286)
T ss_dssp CCS--CCBCHHHHHHHHHHHHTCCC
T ss_pred eCC--CCccHHHHHHHHHHHcCCCC
Confidence 998 88999999999999998764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=241.09 Aligned_cols=233 Identities=20% Similarity=0.168 Sum_probs=177.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+ +|+ +|+++.|+.. .+.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~---~V~~~~r~~~--------------------------------------~~~~ 38 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVG---NLIALDVHSK--------------------------------------EFCG 38 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTS---EEEEECTTCS--------------------------------------SSCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCC---eEEEeccccc--------------------------------------cccc
Confidence 479999999999999999999 785 4578887531 2467
Q ss_pred cCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+..+.++++ +|+|||+||.... .+.+...+++|+.|+.+++++|++. ++ +|||+||.++|+
T Consensus 39 D~~d-------~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~ 109 (299)
T 1n2s_A 39 DFSN-------PKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFP 109 (299)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSC
T ss_pred cCCC-------HHHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEe
Confidence 8884 4434566665 9999999998764 3567888999999999999999987 55 799999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
...+ .+++|+++. .+.+.|+.||+.+|+++.++..
T Consensus 110 ~~~~----~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 144 (299)
T 1n2s_A 110 GTGD----IPWQETDAT-----------------------------------------SPLNVYGKTKLAGEKALQDNCP 144 (299)
T ss_dssp CCTT----CCBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHCS
T ss_pred CCCC----CCCCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHHhCC
Confidence 7532 233332222 3457899999999999998643
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++||+.|||+... + ....++..+..|......+ +...++++++|+|++++.++.........++
T Consensus 145 --~~~ilRp~~v~G~~~~---~------~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~ 211 (299)
T 1n2s_A 145 --KHLIFRTSWVYAGKGN---N------FAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (299)
T ss_dssp --SEEEEEECSEECSSSC---C------HHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred --CeEEEeeeeecCCCcC---c------HHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCc
Confidence 8999999999997542 1 1234445555565434444 4789999999999999998875421110257
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||++++ .++|+.|+++.+.+.+|..+
T Consensus 212 ~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 238 (299)
T 1n2s_A 212 LYHLVAG--GTTTWHDYAALVFDEARKAG 238 (299)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred eEEEeCC--CCCCHHHHHHHHHHHhCCCc
Confidence 9999998 89999999999999988763
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.6e-27 Score=243.91 Aligned_cols=261 Identities=15% Similarity=0.141 Sum_probs=186.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|++.|+ +|+++.|+..... .+++. ++. ++.. ....++.++.
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-~~~~~-~~~---------~~~~-----~~~~~~~~~~ 61 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGY---EVHGIKRRASSFN-TERVD-HIY---------QDPH-----TCNPKFHLHY 61 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECC-------------------------------------CCEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCCcccc-hHHHH-HHh---------hccc-----cCCCceEEEE
Confidence 47899999999999999999999985 5688888754311 11111 110 0000 0024688999
Q ss_pred ccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCc---eEEEEEecc
Q 008315 92 GDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKL---KVFVHVSTA 163 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~l---k~fV~vSTa 163 (570)
+|+++ .+..+.++++ +|+|||+||..... +.+...+++|+.|+.+++++|++. ++ ++||++||.
T Consensus 62 ~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~ 133 (372)
T 1db3_A 62 GDLSD-------TSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTS 133 (372)
T ss_dssp CCSSC-------HHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEG
T ss_pred CCCCC-------HHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCCh
Confidence 99994 3334466664 79999999986543 456778899999999999999987 66 799999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
++++...+ .+++|+.+. .+.+.|+.||+.+|.++.
T Consensus 134 ~v~g~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~ 168 (372)
T 1db3_A 134 ELYGLVQE----IPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITV 168 (372)
T ss_dssp GGGTTCCS----SSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred hhhCCCCC----CCCCccCCC-----------------------------------------CCCChHHHHHHHHHHHHH
Confidence 99986432 223322222 245789999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ....++++...+++||+|+|++++.++..
T Consensus 169 ~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~-- 242 (372)
T 1db3_A 169 NYRESYGMYACNGILFNHESPRRGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-- 242 (372)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS--
T ss_pred HHHHHhCCCeEEEEECCccCCCCCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc--
Confidence 76 348999999999999986532 1211 122344555566754 34568889999999999999999988742
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+ .+++||++++ .++|+.|+++.+.+.+|..
T Consensus 243 --~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 243 --E-QPEDFVIATG--VQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp --S-SCCCEEECCC--CCEEHHHHHHHHHHTTTEE
T ss_pred --C-CCceEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 1 1478999998 8999999999999988764
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=261.34 Aligned_cols=276 Identities=18% Similarity=0.190 Sum_probs=191.1
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES-AALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+...+++|+|||||||||||++|+++|+++|+ +|+++.|...... ..+++. .+ ..
T Consensus 5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~---~V~~~~r~~~~~~~~~~~l~-~~--------------------~~ 60 (699)
T 1z45_A 5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGY---DCVVADNLSNSTYDSVARLE-VL--------------------TK 60 (699)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSSCCTHHHHHHH-HH--------------------HT
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHHHCcC---EEEEEECCCcchHHHHHHHh-hc--------------------cC
Confidence 34456889999999999999999999999985 5678888754332 222221 00 02
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.++.++.+|+++ .+..+.+++ ++|+|||+||..... +.....+++|+.|+.+++++|++. ++++|||
T Consensus 61 ~~v~~v~~Dl~d-------~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~ 132 (699)
T 1z45_A 61 HHIPFYEVDLCD-------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVF 132 (699)
T ss_dssp SCCCEEECCTTC-------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CceEEEEcCCCC-------HHHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence 568899999994 343456666 899999999987642 345677999999999999999987 7899999
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||+++++.....-...+++|+.+. .+.+.|+.||+.+|
T Consensus 133 ~SS~~vyg~~~~~~~~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E 171 (699)
T 1z45_A 133 SSSATVYGDATRFPNMIPIPEECPL-----------------------------------------GPTNPYGHTKYAIE 171 (699)
T ss_dssp EEEGGGGCCGGGSTTCCSBCTTSCC-----------------------------------------CCCSHHHHHHHHHH
T ss_pred ECcHHHhCCCccccccCCccccCCC-----------------------------------------CCCChHHHHHHHHH
Confidence 9999999864210001122222221 24578999999999
Q ss_pred HHHHHhc----CCCcEEEEeccccccCCCCCCCCccc--cccchHHHHHHHhcC--CCceeec------CCCceeecchH
Q 008315 240 MIMQQSK----ENLSLVIIRPTIVSGTYKEPFPGWVE--DLKTINALFVASAQG--NLPCLVG------ETKTIMDVIPV 305 (570)
Q Consensus 240 ~~v~~~~----~~lp~~IvRPsiV~g~~~~p~~gw~~--~~~~~~~~i~~~~~G--~~~~~~~------~~~~~~d~VpV 305 (570)
+++..+. .+++++|+||+.|||+....+-|-.. .......++.....| ....+++ +++...++|||
T Consensus 172 ~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 251 (699)
T 1z45_A 172 NILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 251 (699)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEH
T ss_pred HHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEH
Confidence 9998762 68999999999999975321111100 011223344444443 2223344 67889999999
Q ss_pred HHHHHHHHHHHHHhcC---CCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 306 DMVVNAMIVAMVAHAK---QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 306 Ddva~aii~a~~~~~~---~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+|+|++++.++..... ....+++||++++ .++|+.|+++.+.+.++...
T Consensus 252 ~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~~~ 303 (699)
T 1z45_A 252 VDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDL 303 (699)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhhhhccccccCCceEEEECCC--CCCcHHHHHHHHHHHhCCCC
Confidence 9999999998874321 1122579999998 88999999999999988753
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-27 Score=264.64 Aligned_cols=271 Identities=20% Similarity=0.245 Sum_probs=197.0
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
..+++|+|||||||||||++|+++|++. |+ +|+++.|+..... ++. ...+
T Consensus 311 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~---~V~~~~r~~~~~~---~~~-----------------------~~~~ 361 (660)
T 1z7e_A 311 TARRRTRVLILGVNGFIGNHLTERLLREDHY---EVYGLDIGSDAIS---RFL-----------------------NHPH 361 (660)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHHHSSSE---EEEEEESCCTTTG---GGT-----------------------TCTT
T ss_pred hhccCceEEEEcCCcHHHHHHHHHHHhcCCC---EEEEEEcCchhhh---hhc-----------------------cCCc
Confidence 3467899999999999999999999997 64 5689999764321 000 0257
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
++++.+|++++ ++..+.+++++|+|||+||.... ..++...+++|+.|+.+++++|++. + ++|||+||.
T Consensus 362 v~~v~~Dl~d~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~ 433 (660)
T 1z7e_A 362 FHFVEGDISIH------SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTS 433 (660)
T ss_dssp EEEEECCTTTC------HHHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCG
T ss_pred eEEEECCCCCc------HHHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecH
Confidence 89999999953 33344677899999999998653 3567788999999999999999987 5 899999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
++++...+ .+++|+++... ......+.+.|+.||+.+|+++.
T Consensus 434 ~vyg~~~~----~~~~E~~~~~~----------------------------------~~p~~~p~~~Y~~sK~~~E~~~~ 475 (660)
T 1z7e_A 434 EVYGMCSD----KYFDEDHSNLI----------------------------------VGPVNKPRWIYSVSKQLLDRVIW 475 (660)
T ss_dssp GGGBTCCS----SSBCTTTCCEE----------------------------------ECCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHcCCCCC----cccCCCccccc----------------------------------cCcccCCCCCcHHHHHHHHHHHH
Confidence 99986432 12222221100 00001245689999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++||+.|||+...+..++.-+ -.....++..+..|....++++++...++++|+|+|++++.++....
T Consensus 476 ~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~ 555 (660)
T 1z7e_A 476 AYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG 555 (660)
T ss_dssp HHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGG
T ss_pred HHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcc
Confidence 76 3589999999999999876432110000 11234556666677766677888899999999999999999887432
Q ss_pred CCCCCCceEEeccCCCC-cccHHhHHHHHhhhcccCC
Q 008315 321 KQPSDANIYHVGSSLRN-PVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~-~it~~el~~~~~~~~~~~p 356 (570)
. ...+++||++++ . ++|+.|+++.+.+.++..+
T Consensus 556 ~-~~~g~~~ni~~~--~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 556 N-RCDGEIINIGNP--ENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp G-TTTTEEEEECCG--GGEEEHHHHHHHHHHHHHHCT
T ss_pred c-cCCCeEEEECCC--CCCcCHHHHHHHHHHHhcCCC
Confidence 1 113689999987 5 8999999999999988754
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=238.00 Aligned_cols=262 Identities=17% Similarity=0.181 Sum_probs=168.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR-AADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR-~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
||+|||||||||||++|+++|+++|++ |++++| +.......+.+. + .+ . ...++.++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~~-~-------------~~----~-~~~~~~~~ 58 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYS---VNTTIRADPERKRDVSFLT-N-------------LP----G-ASEKLHFF 58 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEECCCC----CCCHHHH-T-------------ST----T-HHHHEEEC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCE---EEEEEeCCccchhHHHHHH-h-------------hh----c-cCCceEEE
Confidence 689999999999999999999999964 578888 432110001111 0 00 0 01357889
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCccc--CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDE--RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~--~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
.+|+++ .+..+.+++++|+|||+|+.+.+.. +.+..+++|+.||.+++++|.+..++++|||+||..++..
T Consensus 59 ~~Dl~d-------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~ 131 (322)
T 2p4h_X 59 NADLSN-------PDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSF 131 (322)
T ss_dssp CCCTTC-------GGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSC
T ss_pred ecCCCC-------HHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHccc
Confidence 999995 3334578899999999998764432 2345789999999999999988646899999999875432
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc-hHHHHHHHHHHHHHHh--
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN-TYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~~v~~~-- 245 (570)
... .+.+++|+.+.+.+. ... + .+.+ .|+.||+++|+++.++
T Consensus 132 ~~~--~~~~~~e~~~~~~~~---------------------~~~-~-----------~p~~~~Y~~sK~~~e~~~~~~~~ 176 (322)
T 2p4h_X 132 NGK--DKDVLDESDWSDVDL---------------------LRS-V-----------KPFGWNYAVSKTLAEKAVLEFGE 176 (322)
T ss_dssp SSS--CCSEECTTCCCCHHH---------------------HHH-H-----------CCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCeecCCccccchhh---------------------hcc-c-----------CcccccHHHHHHHHHHHHHHHHH
Confidence 111 011223222222110 000 0 1222 6999999999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++++||+.|||+...+. . ......+.....|....+ ++ ...++++|+|+|++++.++... ...
T Consensus 177 ~~gi~~~~lrp~~v~g~~~~~~---~---~~~~~~~~~~~~g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~---~~~ 244 (322)
T 2p4h_X 177 QNGIDVVTLILPFIVGRFVCPK---L---PDSIEKALVLVLGKKEQI-GV--TRFHMVHVDDVARAHIYLLENS---VPG 244 (322)
T ss_dssp HTTCCEEEEEECEEESCCCSSS---C---CHHHHHHTHHHHSCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSC---CCC
T ss_pred hcCCcEEEEcCCceECCCCCCC---C---CchHHHHHHHHhCCCccC-cC--CCcCEEEHHHHHHHHHHHhhCc---CCC
Confidence 3589999999999999865321 1 111111112233432222 22 3448999999999999988531 112
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
+ .|| +++ .++|+.|+++.+.+.++
T Consensus 245 g-~~~-~~~--~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 245 G-RYN-CSP--FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp E-EEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred C-CEE-EcC--CCCCHHHHHHHHHHhCC
Confidence 3 599 455 78999999999987764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=233.06 Aligned_cols=226 Identities=17% Similarity=0.216 Sum_probs=174.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|||||||||||++|+++|+++|+ +|+++.|+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~------------------------------------------ 45 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNV---EVIPTDVQ------------------------------------------ 45 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSE---EEEEECTT------------------------------------------
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCC---eEEeccCc------------------------------------------
Confidence 468999999999999999999999885 45677763
Q ss_pred EccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
.+|+++ .+..+.+++ ++|+|||+||....+ +.+...+++|+.|+.+++++|++. ++ +|||+||.++
T Consensus 46 ~~Dl~d-------~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v 116 (292)
T 1vl0_A 46 DLDITN-------VLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYV 116 (292)
T ss_dssp TCCTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGG
T ss_pred cCCCCC-------HHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHe
Confidence 257763 333456666 799999999987643 567788999999999999999997 66 9999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
|+...+ .+++|+.+. .+.+.|+.||+.+|++++.+
T Consensus 117 ~~~~~~----~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~E~~~~~~ 151 (292)
T 1vl0_A 117 FDGEAK----EPITEFDEV-----------------------------------------NPQSAYGKTKLEGENFVKAL 151 (292)
T ss_dssp SCSCCS----SCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred ECCCCC----CCCCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHhh
Confidence 986431 233332222 24578999999999999986
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
. .+++++||+.|||+ .. ++ ...++..+..|......+ +...++++++|+|++++.++... .
T Consensus 152 ~--~~~~~lR~~~v~G~-~~---~~------~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-----~ 212 (292)
T 1vl0_A 152 N--PKYYIVRTAWLYGD-GN---NF------VKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-----N 212 (292)
T ss_dssp C--SSEEEEEECSEESS-SS---CH------HHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-----C
T ss_pred C--CCeEEEeeeeeeCC-Cc---Ch------HHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-----C
Confidence 4 37999999999997 21 21 223444444554434444 47899999999999999988753 3
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++||++++ .++|+.|+++.+.+.++..+
T Consensus 213 ~~~~~i~~~--~~~s~~e~~~~i~~~~g~~~ 241 (292)
T 1vl0_A 213 YGTFHCTCK--GICSWYDFAVEIFRLTGIDV 241 (292)
T ss_dssp CEEEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred CcEEEecCC--CCccHHHHHHHHHHHhCCCC
Confidence 689999998 89999999999999988653
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=241.77 Aligned_cols=259 Identities=16% Similarity=0.163 Sum_probs=188.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC-ceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE-KITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~-kv~~v~ 91 (570)
|+|||||||||||++|+++|++.|+ +|+++.|+...... +++. .+ ...+.. ... ++.++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~---~V~~~~r~~~~~~~-~~~~-~~-----~~~~~~---------~~~~~~~~~~ 89 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY---EVHGLIRRSSNFNT-QRIN-HI-----YIDPHN---------VNKALMKLHY 89 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCCSSCCC-TTTT-TT-----C-----------------CCEEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC---EEEEEecCCccccc-hhhh-hh-----hhcccc---------ccccceEEEE
Confidence 5899999999999999999999985 56889997643110 0000 00 000000 012 788999
Q ss_pred ccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCce-----EEEEEe
Q 008315 92 GDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLK-----VFVHVS 161 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-----~fV~vS 161 (570)
+|+++ .+....++++ +|+|||+||..... +.+...+++|+.|+.+++++|.+. +++ +|||+|
T Consensus 90 ~Dl~d-------~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~S 161 (381)
T 1n7h_A 90 ADLTD-------ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAG 161 (381)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEE
T ss_pred CCCCC-------HHHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeC
Confidence 99994 4434466664 69999999987653 457788999999999999999987 565 999999
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|.++|+...+ +++|+.+. .+.+.|+.||+.+|.+
T Consensus 162 S~~vyg~~~~-----~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~E~~ 195 (381)
T 1n7h_A 162 SSEMFGSTPP-----PQSETTPF-----------------------------------------HPRSPYAASKCAAHWY 195 (381)
T ss_dssp EGGGGTTSCS-----SBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHH
T ss_pred cHHHhCCCCC-----CCCCCCCC-----------------------------------------CCCCchHHHHHHHHHH
Confidence 9999987543 33332222 2457899999999999
Q ss_pred HHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHHH
Q 008315 242 MQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMVA 318 (570)
Q Consensus 242 v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~ 318 (570)
+..+ ..+++++++||+.+||+...+ .+.. .....++..+..|.. ....++++...++++|+|+|++++.++..
T Consensus 196 ~~~~~~~~~~~~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~ 271 (381)
T 1n7h_A 196 TVNYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ 271 (381)
T ss_dssp HHHHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCcEEEEEeCceeCCCCCC--cchh--HHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 9876 348999999999999975421 1111 112234444555653 34568888999999999999999988852
Q ss_pred hcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 319 HAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 319 ~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. . +++||++++ .++|+.|+++.+.+.++..
T Consensus 272 ~---~--~~~~~i~~~--~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 272 E---K--PDDYVVATE--EGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp S---S--CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred C---C--CCeEEeeCC--CCCcHHHHHHHHHHHcCCC
Confidence 1 1 479999998 8999999999999998864
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=225.78 Aligned_cols=221 Identities=17% Similarity=0.135 Sum_probs=160.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ +|+++.|+..... ....++.++.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~----------------------------~~~~~~~~~~~ 53 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPEKIK----------------------------IENEHLKVKKA 53 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGGGCC----------------------------CCCTTEEEECC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCcccch----------------------------hccCceEEEEe
Confidence 7999999999999999999999985 5689999754321 01267899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++ .+..+.+++++|+|||+|+....+ ...+++|+.++.+++++|++. ++++|||+||..++....+.
T Consensus 54 Dl~d-------~~~~~~~~~~~d~vi~~a~~~~~~---~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~ 122 (227)
T 3dhn_A 54 DVSS-------LDEVCEVCKGADAVISAFNPGWNN---PDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGL 122 (227)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTE
T ss_pred cCCC-------HHHHHHHhcCCCEEEEeCcCCCCC---hhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCC
Confidence 9994 444568889999999999875222 236788999999999999997 78999999999877544332
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCCCc
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KENLS 250 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~lp 250 (570)
..|. .+. .+.+.|+.+|+.+|.+++.+ ..+++
T Consensus 123 ~~~~-----~~~-----------------------------------------~p~~~Y~~sK~~~e~~~~~~~~~~~~~ 156 (227)
T 3dhn_A 123 RLMD-----SGE-----------------------------------------VPENILPGVKALGEFYLNFLMKEKEID 156 (227)
T ss_dssp EGGG-----TTC-----------------------------------------SCGGGHHHHHHHHHHHHHTGGGCCSSE
T ss_pred cccc-----CCc-----------------------------------------chHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 2221 110 23578999999999888776 46899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.|||+...+ +... ..+......+++ .++++++|+|++++.++... ...+++||
T Consensus 157 ~~ilrp~~v~g~~~~~--~~~~------------~~~~~~~~~~~~---~~~i~~~Dva~ai~~~l~~~---~~~g~~~~ 216 (227)
T 3dhn_A 157 WVFFSPAADMRPGVRT--GRYR------------LGKDDMIVDIVG---NSHISVEDYAAAMIDELEHP---KHHQERFT 216 (227)
T ss_dssp EEEEECCSEEESCCCC--CCCE------------EESSBCCCCTTS---CCEEEHHHHHHHHHHHHHSC---CCCSEEEE
T ss_pred EEEEeCCcccCCCccc--ccee------------ecCCCcccCCCC---CcEEeHHHHHHHHHHHHhCc---cccCcEEE
Confidence 9999999999986532 1111 011111222222 79999999999999999743 23479999
Q ss_pred eccCCCCcccHHh
Q 008315 331 VGSSLRNPVTLVS 343 (570)
Q Consensus 331 ~~s~~~~~it~~e 343 (570)
++++ ++.+|.+
T Consensus 217 ~~~~--~~~~~~~ 227 (227)
T 3dhn_A 217 IGYL--EHHHHHH 227 (227)
T ss_dssp EECC--SCCC---
T ss_pred EEee--hhcccCC
Confidence 9998 7777753
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-26 Score=238.73 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=183.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCC--CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQP--NVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~--~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+|+|||||||||||++|+++|+++|. .+.+|++++|+..... + ...++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~------------------------~~~~~~~ 52 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----H------------------------EDNPINY 52 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----C------------------------CSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----c------------------------ccCceEE
Confidence 57999999999999999999999881 1235789999765431 0 0257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCC---ccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc-cCceEEE-------
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNE---LDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC-VKLKVFV------- 158 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~---vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV------- 158 (570)
+.+|+++ .+....++++ +|+|||+||... .+....+++|+.|+.+++++|++. +++++||
T Consensus 53 ~~~Dl~d-------~~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i 123 (364)
T 2v6g_A 53 VQCDISD-------PDDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKH 123 (364)
T ss_dssp EECCTTS-------HHHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHH
T ss_pred EEeecCC-------HHHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceE
Confidence 9999994 4444577787 999999999863 467788999999999999999985 3689998
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
|+||..+||.... .+.+++|+.+.. ..++.| ..+
T Consensus 124 ~~Ss~~vyg~~~~--~~~~~~E~~~~~----------------------------------------~~~~~y----~~~ 157 (364)
T 2v6g_A 124 YMGPFESYGKIES--HDPPYTEDLPRL----------------------------------------KYMNFY----YDL 157 (364)
T ss_dssp HHCCGGGTTTSCC--CCSSBCTTSCCC----------------------------------------SSCCHH----HHH
T ss_pred EEechhhcccccc--CCCCCCccccCC----------------------------------------ccchhh----HHH
Confidence 8999999986420 112333322221 124667 458
Q ss_pred HHHHHHhc--CC-CcEEEEeccccccCCCCCCCCccccccchHH-HHHHH--hcCCCceeecCC---CceeecchHHHHH
Q 008315 239 EMIMQQSK--EN-LSLVIIRPTIVSGTYKEPFPGWVEDLKTINA-LFVAS--AQGNLPCLVGET---KTIMDVIPVDMVV 309 (570)
Q Consensus 239 E~~v~~~~--~~-lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~-~i~~~--~~G~~~~~~~~~---~~~~d~VpVDdva 309 (570)
|+++.++. .+ ++++|+||+.|||+...+... ..... ++..+ ..|....+++++ ....++++|||+|
T Consensus 158 E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva 232 (364)
T 2v6g_A 158 EDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMN-----LVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIA 232 (364)
T ss_dssp HHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSC-----HHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHH
T ss_pred HHHHHHHhhcCCCceEEEECCCceeCCCCCcccc-----hHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHH
Confidence 88888763 45 999999999999987642211 11112 23333 256554556766 4558899999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++++.++.... ..+++||++++ .++|+.|+++.+.+.+|..+
T Consensus 233 ~a~~~~~~~~~---~~g~~~ni~~~--~~~s~~e~~~~i~~~~g~~~ 274 (364)
T 2v6g_A 233 EHHIWAAVDPY---AKNEAFNVSNG--DVFKWKHFWKVLAEQFGVEC 274 (364)
T ss_dssp HHHHHHHHCGG---GTTEEEEECCS--CCBCHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHhCCC---CCCceEEecCC--CcCCHHHHHHHHHHHhCCCC
Confidence 99999987432 13679999998 78999999999999998754
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-27 Score=242.19 Aligned_cols=261 Identities=17% Similarity=0.198 Sum_probs=168.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|+++|+++|++ |++++|+.........+. ++ + ...+++++.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~---V~~~~r~~~~~~~~~~~~-~~-------------~------~~~~~~~~~ 65 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYA---VNTTVRDPDNQKKVSHLL-EL-------------Q------ELGDLKIFR 65 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCE---EEEEESCTTCTTTTHHHH-HH-------------G------GGSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCE---EEEEEcCcchhhhHHHHH-hc-------------C------CCCcEEEEe
Confidence 689999999999999999999999965 467888754322111111 00 0 024688999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc--cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc-cCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD--ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV-AGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~--~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v-~~~ 168 (570)
+|++++ ++ .+.+++++|+|||+||...+. ++.++.+++|+.||.+++++|++..++++|||+||+.+ ++.
T Consensus 66 ~Dl~d~------~~-~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~ 138 (338)
T 2rh8_A 66 ADLTDE------LS-FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN 138 (338)
T ss_dssp CCTTTS------SS-SHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred cCCCCh------HH-HHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence 999953 23 347778999999999987543 22344789999999999999998744899999999874 322
Q ss_pred C-C---CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc-hHHHHHHHHHHHHH
Q 008315 169 R-T---GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN-TYVFTKTMGEMIMQ 243 (570)
Q Consensus 169 ~-~---g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n-~Y~~sK~~aE~~v~ 243 (570)
. . ..++|....+.....+ . .+++ .|+.||+++|+++.
T Consensus 139 ~~~~~~~~~~E~~~~~~~~~~~-------------------------------------~-~~~~~~Y~~sK~~~E~~~~ 180 (338)
T 2rh8_A 139 QLDGTGLVVDEKNWTDIEFLTS-------------------------------------A-KPPTWGYPASKTLAEKAAW 180 (338)
T ss_dssp HHTCSCCCCCTTTTTCC---------------------------------------------CCCCCCTTSCCHHHHHHH
T ss_pred CcCCCCcccChhhccchhhccc-------------------------------------c-CCccchHHHHHHHHHHHHH
Confidence 1 0 1233432110000000 0 1122 59999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecC------CCceeecchHHHHHHHHHHH
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE------TKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~------~~~~~d~VpVDdva~aii~a 315 (570)
++ ..+++++++||+.|||+...+. . ......+.....|... ..+. +....++++|+|+|++++.+
T Consensus 181 ~~~~~~gi~~~~lrp~~v~Gp~~~~~---~---~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 253 (338)
T 2rh8_A 181 KFAEENNIDLITVIPTLMAGSSLTSD---V---PSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFV 253 (338)
T ss_dssp HHHHHHTCCEEEEEECEEESCCSSSS---C---CHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEeCCceECCCCCCC---C---CchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHH
Confidence 76 3589999999999999865331 1 1101111112223211 1110 11234899999999999998
Q ss_pred HHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 316 MVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 316 ~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
+... ....+||+++ ..+|+.|+++.+.+.++.
T Consensus 254 ~~~~----~~~~~~~~~~---~~~s~~e~~~~l~~~~~~ 285 (338)
T 2rh8_A 254 AEKE----SASGRYICCA---ANTSVPELAKFLSKRYPQ 285 (338)
T ss_dssp HHCT----TCCEEEEECS---EEECHHHHHHHHHHHCTT
T ss_pred HcCC----CcCCcEEEec---CCCCHHHHHHHHHHhCCC
Confidence 8531 1245798865 468999999999887653
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=231.86 Aligned_cols=262 Identities=14% Similarity=0.157 Sum_probs=170.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|||||||||||++|+++|+++|++ |++++|+.......+.+. + .+ . ...+++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~---V~~~~r~~~~~~~~~~~~----~----------~~----~-~~~~~~~~ 61 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYT---VRATVRDPTNVKKVKHLL----D----------LP----K-AETHLTLW 61 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCTTCHHHHHHHH----T----------ST----T-HHHHEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCE---EEEEECCcchhHHHHHHH----h----------cc----c-CCCeEEEE
Confidence 5789999999999999999999999964 577888754321111111 0 00 0 01358899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cC-HHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc-cC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ER-YDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV-AG 167 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~-~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v-~~ 167 (570)
.+|++++ ++ .+.+++++|+|||+||...+. .. .+..+++|+.||.+++++|.+..++++|||+||+.+ ++
T Consensus 62 ~~Dl~d~------~~-~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~ 134 (337)
T 2c29_D 62 KADLADE------GS-FDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI 134 (337)
T ss_dssp ECCTTST------TT-THHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSC
T ss_pred EcCCCCH------HH-HHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhccc
Confidence 9999953 33 357788999999999987543 22 345789999999999999998734899999999874 43
Q ss_pred CCC--CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 168 ERT--GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 168 ~~~--g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
... ..++|. .+.+.+.. .. ...+.+.|+.||+++|+++.++
T Consensus 135 ~~~~~~~~~E~-----~~~~~~~~---------------------~~-----------~~~~~~~Y~~sK~~~E~~~~~~ 177 (337)
T 2c29_D 135 QEHQLPVYDES-----CWSDMEFC---------------------RA-----------KKMTAWMYFVSKTLAEQAAWKY 177 (337)
T ss_dssp SSSCCSEECTT-----CCCCHHHH---------------------HH-----------HCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccCcc-----cCCchhhh---------------------cc-----------cCCccchHHHHHHHHHHHHHHH
Confidence 321 123333 22111100 00 0012357999999999999876
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..+++++++||+.|||+...+. +............|... ..+.. ....+++|+|+|++++.++...
T Consensus 178 ~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~---- 245 (337)
T 2c29_D 178 AKENNIDFITIIPTLVVGPFIMSS------MPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENP---- 245 (337)
T ss_dssp HHHHTCCEEEEEECEEESCCSCSS------CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCT----
T ss_pred HHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCc----
Confidence 3589999999999999865321 11000001011223211 11111 2345999999999999988631
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcc
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFT 353 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~ 353 (570)
....+|++++ ..+|+.|+++.+.+.++
T Consensus 246 ~~~~~~~~~~---~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 246 KAEGRYICSS---HDCIILDLAKMLREKYP 272 (337)
T ss_dssp TCCEEEEECC---EEEEHHHHHHHHHHHCT
T ss_pred ccCceEEEeC---CCCCHHHHHHHHHHHCC
Confidence 1245787755 46899999999998764
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=226.77 Aligned_cols=218 Identities=13% Similarity=0.215 Sum_probs=168.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV--QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~--g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|+|||||||||||++|+++|+++ |+ +|+++.|+..... .+. ..+++++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~---~l~------------------------~~~~~~~ 50 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS---QIIAIVRNVEKAS---TLA------------------------DQGVEVR 50 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTTH---HHH------------------------HTTCEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC---eEEEEEcCHHHHh---HHh------------------------hcCCeEE
Confidence 57999999999999999999998 65 4578999754321 111 1467899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+....+++++|+|||+||.. .. + ++|+.|+.+++++|++. ++++|||+||.+++.
T Consensus 51 ~~D~~d-------~~~l~~~~~~~d~vi~~a~~~-~~---~---~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~--- 112 (287)
T 2jl1_A 51 HGDYNQ-------PESLQKAFAGVSKLLFISGPH-YD---N---TLLIVQHANVVKAARDA-GVKHIAYTGYAFAEE--- 112 (287)
T ss_dssp ECCTTC-------HHHHHHHTTTCSEEEECCCCC-SC---H---HHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGG---
T ss_pred EeccCC-------HHHHHHHHhcCCEEEEcCCCC-cC---c---hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC---
Confidence 999994 444568889999999999963 21 1 67999999999999987 889999999988742
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
.+..|+.+|..+|+++++ .+++
T Consensus 113 --------------------------------------------------------~~~~y~~~K~~~E~~~~~--~~~~ 134 (287)
T 2jl1_A 113 --------------------------------------------------------SIIPLAHVHLATEYAIRT--TNIP 134 (287)
T ss_dssp --------------------------------------------------------CCSTHHHHHHHHHHHHHH--TTCC
T ss_pred --------------------------------------------------------CCCchHHHHHHHHHHHHH--cCCC
Confidence 124699999999999986 6899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.++++.. +.++ ... ...|.. ..+.++...++++++|+|++++.++... ...+++||
T Consensus 135 ~~ilrp~~~~~~~~---~~~~------~~~---~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~~~ 197 (287)
T 2jl1_A 135 YTFLRNALYTDFFV---NEGL------RAS---TESGAI--VTNAGSGIVNSVTRNELALAAATVLTEE---GHENKTYN 197 (287)
T ss_dssp EEEEEECCBHHHHS---SGGG------HHH---HHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTSS---SCTTEEEE
T ss_pred eEEEECCEeccccc---hhhH------HHH---hhCCce--eccCCCCccCccCHHHHHHHHHHHhcCC---CCCCcEEE
Confidence 99999999887531 1111 111 122332 2455677889999999999999988632 12368999
Q ss_pred eccCCCCcccHHhHHHHHhhhcccC
Q 008315 331 VGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 ~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++++ .++|+.|+++.+.+.+|..
T Consensus 198 i~~~--~~~s~~e~~~~i~~~~g~~ 220 (287)
T 2jl1_A 198 LVSN--QPWTFDELAQILSEVSGKK 220 (287)
T ss_dssp ECCS--SCBCHHHHHHHHHHHHSSC
T ss_pred ecCC--CcCCHHHHHHHHHHHHCCc
Confidence 9988 8999999999999999875
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.7e-26 Score=247.23 Aligned_cols=236 Identities=14% Similarity=0.113 Sum_probs=171.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|||||||||||++|++.|++.|+ +|++++|+.... ..+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~---~V~~l~R~~~~~-----------------------------------~~v~ 188 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH---EVIQLVRKEPKP-----------------------------------GKRF 188 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSSCCT-----------------------------------TCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCCCCc-----------------------------------ccee
Confidence 68999999999999999999999986 568999976431 1256
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
+|+.+. . ..+++++|+|||+||.... .+.....+++|+.|+.+++++|.+..++++|||+||+++|+
T Consensus 189 ~d~~~~-------~--~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 189 WDPLNP-------A--SDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCTTSC-------C--TTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred ecccch-------h--HHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 777632 1 2455799999999998633 24567789999999999999954545889999999999998
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-c
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-K 246 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~ 246 (570)
... ...+++|+.+. ..+.|+.+|..+|.++... .
T Consensus 260 ~~~---~~~~~~E~~~~------------------------------------------~~~~y~~~~~~~E~~~~~~~~ 294 (516)
T 3oh8_A 260 HDR---GDEILTEESES------------------------------------------GDDFLAEVCRDWEHATAPASD 294 (516)
T ss_dssp SEE---EEEEECTTSCC------------------------------------------CSSHHHHHHHHHHHTTHHHHH
T ss_pred CCC---CCCccCCCCCC------------------------------------------CcChHHHHHHHHHHHHHHHHh
Confidence 321 12233332221 3567999999999887654 5
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++|+||+.|||+.. +. ...++..+..|.. ...++++...++|+|+|+|++++.++.... ..
T Consensus 295 ~gi~~~ilRp~~v~Gp~~----~~------~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~----~~ 359 (516)
T 3oh8_A 295 AGKRVAFIRTGVALSGRG----GM------LPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ----IS 359 (516)
T ss_dssp TTCEEEEEEECEEEBTTB----SH------HHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTT----CC
T ss_pred CCCCEEEEEeeEEECCCC----Ch------HHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcc----cC
Confidence 789999999999999752 11 1122222333333 466888999999999999999999987322 24
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+||++++ +++|+.|+++.+.+.+|..+
T Consensus 360 g~~ni~~~--~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 360 GPINAVAP--NPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp EEEEESCS--CCEEHHHHHHHTTC------
T ss_pred CcEEEECC--CCCCHHHHHHHHHHHhCCCC
Confidence 68999998 89999999999999888653
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=241.29 Aligned_cols=215 Identities=17% Similarity=0.153 Sum_probs=170.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ ++++.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-------------------------------------------------~~v~~~ 31 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-------------------------------------------------HHIFEV 31 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-------------------------------------------------CEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-------------------------------------------------CEEEEE
Confidence 5899999999999999999999875 123344
Q ss_pred cC-CCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCce-EEEEEecccccCCCC
Q 008315 93 DI-SSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLK-VFVHVSTAYVAGERT 170 (570)
Q Consensus 93 Dl-~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-~fV~vSTa~v~~~~~ 170 (570)
|. + +.+..+.+++++|+|||+||..... .....+++|+.++.+++++|++. +++ +|||+||+++++
T Consensus 32 d~~~-------d~~~l~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~--- 99 (369)
T 3st7_A 32 HRQT-------KEEELESALLKADFIVHLAGVNRPE-HDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ--- 99 (369)
T ss_dssp CTTC-------CHHHHHHHHHHCSEEEECCCSBCTT-CSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS---
T ss_pred CCCC-------CHHHHHHHhccCCEEEECCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC---
Confidence 55 3 3344457788999999999987653 44556889999999999999987 666 999999999875
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCC
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KEN 248 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~ 248 (570)
.+.|+.||+.+|+++.++ ..+
T Consensus 100 ---------------------------------------------------------~~~Y~~sK~~~E~~~~~~~~~~g 122 (369)
T 3st7_A 100 ---------------------------------------------------------DNPYGESKLQGEQLLREYAEEYG 122 (369)
T ss_dssp ---------------------------------------------------------CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------------------------------------------CCCchHHHHHHHHHHHHHHHHhC
Confidence 257999999999999886 358
Q ss_pred CcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCce
Q 008315 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++|+||+.|||+...|.. . +....++..+..|.... .++++...+++|+||+|++++.++...... .+++
T Consensus 123 ~~~~i~R~~~v~G~~~~~~~---~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~--~~~~ 194 (369)
T 3st7_A 123 NTVYIYRWPNLFGKWCKPNY---N--SVIATFCYKIARNEEIQ-VNDRNVELTLNYVDDIVAEIKRAIEGTPTI--ENGV 194 (369)
T ss_dssp CCEEEEEECEEECTTCCTTS---S--CHHHHHHHHHHTTCCCC-CSCTTCEEEEEEHHHHHHHHHHHHHTCCCE--ETTE
T ss_pred CCEEEEECCceeCCCCCCCc---c--hHHHHHHHHHHcCCCeE-ecCCCeEEEEEEHHHHHHHHHHHHhCCccc--CCce
Confidence 99999999999998775421 0 22334455555665433 357899999999999999999998743211 1689
Q ss_pred EEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 329 YHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 329 yn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
||++++ .++|+.|+++.+.+.++..
T Consensus 195 ~~i~~~--~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 195 PTVPNV--FKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp ECCSCC--EEEEHHHHHHHHHHHHHHH
T ss_pred EEeCCC--CceeHHHHHHHHHHHhCCC
Confidence 999998 8999999999999998875
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=221.40 Aligned_cols=223 Identities=17% Similarity=0.146 Sum_probs=170.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|++.|+ +|+++.|+..... ..+++++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~---~V~~~~r~~~~~~------------------------------~~~~~~~ 48 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE---ILRLADLSPLDPA------------------------------GPNEECV 48 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE---EEEEEESSCCCCC------------------------------CTTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC---EEEEEecCCcccc------------------------------CCCCEEE
Confidence 468999999999999999999999985 5688898764321 2578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|++ +.+..+.+++++|+|||+||.. ..++++..+++|+.|+.+++++|++. +.++||++||..+++...
T Consensus 49 ~~Dl~-------d~~~~~~~~~~~D~vi~~Ag~~-~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~ 119 (267)
T 3rft_A 49 QCDLA-------DANAVNAMVAGCDGIVHLGGIS-VEKPFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYP 119 (267)
T ss_dssp ECCTT-------CHHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSB
T ss_pred EcCCC-------CHHHHHHHHcCCCEEEECCCCc-CcCCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCC
Confidence 99999 4444568889999999999984 45678889999999999999999887 789999999999987532
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCC
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KEN 248 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~ 248 (570)
. +.+++|+.+. .+.+.|+.||+.+|.+++.+ ..+
T Consensus 120 ~---~~~~~e~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~a~~~g 155 (267)
T 3rft_A 120 Q---TERLGPDVPA-----------------------------------------RPDGLYGVSKCFGENLARMYFDKFG 155 (267)
T ss_dssp T---TSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred C---CCCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHhC
Confidence 1 1222222221 34578999999999999865 458
Q ss_pred CcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCce
Q 008315 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
++++++||+.|+|+.. +++...++++++|+++++..++... .....+
T Consensus 156 ~~~~~vr~~~v~~~~~------------------------------~~~~~~~~~~~~d~a~~~~~~~~~~---~~~~~~ 202 (267)
T 3rft_A 156 QETALVRIGSCTPEPN------------------------------NYRMLSTWFSHDDFVSLIEAVFRAP---VLGCPV 202 (267)
T ss_dssp CCEEEEEECBCSSSCC------------------------------STTHHHHBCCHHHHHHHHHHHHHCS---CCCSCE
T ss_pred CeEEEEEeecccCCCC------------------------------CCCceeeEEcHHHHHHHHHHHHhCC---CCCceE
Confidence 9999999999998522 2344567899999999998887632 222457
Q ss_pred EEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 329 yn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++.++ ++.+|.++... +.+|..|
T Consensus 203 ~~~~s~--~~~~~~~~~~~--~~~g~~p 226 (267)
T 3rft_A 203 VWGASA--NDAGWWDNSHL--GFLGWKP 226 (267)
T ss_dssp EEECCC--CTTCCBCCGGG--GGGCCCC
T ss_pred EEEeCC--CCCCcccChhH--HHCCCCC
Confidence 888877 67777776433 4455544
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=218.07 Aligned_cols=217 Identities=16% Similarity=0.236 Sum_probs=164.2
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce-
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI- 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv- 87 (570)
.++||+|||||||||||++|+++|+++|+ +|+++.|+.... +.+. ..++
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~~~~---~~~~------------------------~~~~~ 67 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRNEEQG---PELR------------------------ERGAS 67 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSGGGH---HHHH------------------------HTTCS
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECChHHH---HHHH------------------------hCCCc
Confidence 46899999999999999999999999986 568899975432 1111 1467
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
+++.+|++ ++. ...++++|+|||+||.... +.++..+++|+.|+.+++++|++. ++++||++||.....
T Consensus 68 ~~~~~Dl~--------~~~-~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~ 136 (236)
T 3e8x_A 68 DIVVANLE--------EDF-SHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVD 136 (236)
T ss_dssp EEEECCTT--------SCC-GGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSC
T ss_pred eEEEcccH--------HHH-HHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCC
Confidence 89999998 122 2566899999999998654 567888999999999999999987 789999999944332
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
. |. ++ ...+.|+.+|+.+|.++++ .
T Consensus 137 ~------~~-----~~------------------------------------------~~~~~Y~~sK~~~e~~~~~--~ 161 (236)
T 3e8x_A 137 P------DQ-----GP------------------------------------------MNMRHYLVAKRLADDELKR--S 161 (236)
T ss_dssp G------GG-----SC------------------------------------------GGGHHHHHHHHHHHHHHHH--S
T ss_pred C------CC-----Ch------------------------------------------hhhhhHHHHHHHHHHHHHH--C
Confidence 1 10 00 1246899999999999985 7
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++++||+.|+|+... + .. ....+.....++++++|+|++++.++.... ..++
T Consensus 162 gi~~~~lrpg~v~~~~~~---~------------------~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~ 216 (236)
T 3e8x_A 162 SLDYTIVRPGPLSNEEST---G------------------KV-TVSPHFSEITRSITRHDVAKVIAELVDQQH---TIGK 216 (236)
T ss_dssp SSEEEEEEECSEECSCCC---S------------------EE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGG---GTTE
T ss_pred CCCEEEEeCCcccCCCCC---C------------------eE-EeccCCCcccCcEeHHHHHHHHHHHhcCcc---ccCC
Confidence 899999999999997431 1 11 122334456889999999999999886432 2378
Q ss_pred eEEeccCCCCcccHHhHHHHHh
Q 008315 328 IYHVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~ 349 (570)
+||++++ +.++.|+++.+.
T Consensus 217 ~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 217 TFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp EEEEEEC---SEEHHHHHHTC-
T ss_pred eEEEeCC---CcCHHHHHHHhc
Confidence 9999986 499999988764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-24 Score=215.35 Aligned_cols=224 Identities=19% Similarity=0.208 Sum_probs=170.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++++++|++ |+ +|+++.|+.... ++ +.+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~---~V~~~~r~~~~~--------------------------------~~---~~~ 41 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RH---EVIKVYNSSEIQ--------------------------------GG---YKL 41 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TS---CEEEEESSSCCT--------------------------------TC---EEC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CC---eEEEecCCCcCC--------------------------------CC---cee
Confidence 4799999999999999999995 74 457888875310 11 789
Q ss_pred cCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+..+.++++ +|+|||+||..... +.++..+++|+.|+.+++++|++. +. +|||+||..+++
T Consensus 42 Dl~~-------~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~ 112 (273)
T 2ggs_A 42 DLTD-------FPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFD 112 (273)
T ss_dssp CTTS-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSC
T ss_pred ccCC-------HHHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEc
Confidence 9984 4434566665 99999999987653 567888999999999999999987 55 899999999997
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
...+.+.|. .+. .+.+.|+.||+.+|++++.
T Consensus 113 ~~~~~~~e~-----~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~--- 143 (273)
T 2ggs_A 113 GEKGNYKEE-----DIP-----------------------------------------NPINYYGLSKLLGETFALQ--- 143 (273)
T ss_dssp SSSCSBCTT-----SCC-----------------------------------------CCSSHHHHHHHHHHHHHCC---
T ss_pred CCCCCcCCC-----CCC-----------------------------------------CCCCHHHHHHHHHHHHHhC---
Confidence 654333332 221 2457899999999999876
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
++++++||+.|+|. . ++ ...++.....|......++ ..++++++|+|++++.++.... .+
T Consensus 144 -~~~~~iR~~~v~G~--~---~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-----~g 203 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRN--K---GF------PIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-----TG 203 (273)
T ss_dssp -TTCEEEEECCCBSS--S---SH------HHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-----CE
T ss_pred -CCeEEEeccccccc--c---HH------HHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-----CC
Confidence 78899999999972 1 11 1223344455554444443 7899999999999999987431 35
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||+++ .++|+.|+++.+.+.+|..+
T Consensus 204 ~~~i~~---~~~s~~e~~~~~~~~~g~~~ 229 (273)
T 2ggs_A 204 IIHVAG---ERISRFELALKIKEKFNLPG 229 (273)
T ss_dssp EEECCC---CCEEHHHHHHHHHHHTTCCS
T ss_pred eEEECC---CcccHHHHHHHHHHHhCCCh
Confidence 999986 68999999999999988764
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.8e-25 Score=220.34 Aligned_cols=221 Identities=17% Similarity=0.166 Sum_probs=169.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.|+ +|+++.|+..... ..++.++.+
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~------------------------------~~~~~~~~~ 49 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAH---EVRLSDIVDLGAA------------------------------EAHEEIVAC 49 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEE---EEEECCSSCCCCC------------------------------CTTEEECCC
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCC---EEEEEeCCCcccc------------------------------CCCccEEEc
Confidence 6899999999999999999999884 5688888754310 135788999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++ .+....+++++|+|||+||.. ..+.++..+++|+.|+.+++++|++. ++++||++||..+++...+
T Consensus 50 Dl~d-------~~~~~~~~~~~d~vi~~a~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~- 119 (267)
T 3ay3_A 50 DLAD-------AQAVHDLVKDCDGIIHLGGVS-VERPWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPR- 119 (267)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCSCC-SCCCHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBT-
T ss_pred cCCC-------HHHHHHHHcCCCEEEECCcCC-CCCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCC-
Confidence 9994 444568889999999999986 34567888999999999999999987 7899999999999976421
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCCCc
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KENLS 250 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~lp 250 (570)
+.+++|+.+. .+.+.|+.||+.+|.++..+ ..+++
T Consensus 120 --~~~~~E~~~~-----------------------------------------~~~~~Y~~sK~~~e~~~~~~~~~~gi~ 156 (267)
T 3ay3_A 120 --TTRIDTEVPR-----------------------------------------RPDSLYGLSKCFGEDLASLYYHKFDIE 156 (267)
T ss_dssp --TSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred --CCCCCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHHHHHcCCC
Confidence 1233332222 24578999999999999875 46899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.||+. |. +++...++++++|+|++++.++... .....+||
T Consensus 157 ~~~lrp~~v~~~---~~---------------------------~~~~~~~~~~~~dva~~~~~~~~~~---~~~~~~~~ 203 (267)
T 3ay3_A 157 TLNIRIGSCFPK---PK---------------------------DARMMATWLSVDDFMRLMKRAFVAP---KLGCTVVY 203 (267)
T ss_dssp EEEEEECBCSSS---CC---------------------------SHHHHHHBCCHHHHHHHHHHHHHSS---CCCEEEEE
T ss_pred EEEEeceeecCC---CC---------------------------CCCeeeccccHHHHHHHHHHHHhCC---CCCceeEe
Confidence 999999999843 11 1123457899999999999988632 11247899
Q ss_pred eccCCCCcccHHhHHHHHhhhcccCC
Q 008315 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 331 ~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+.++ .+.++.++.+. +.+|..|
T Consensus 204 ~~~~--~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 204 GASA--NTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp ECCS--CSSCCBCCGGG--GGGCCCC
T ss_pred cCCC--ccccccCHHHH--HHcCCCC
Confidence 9877 67888888777 6666554
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=214.14 Aligned_cols=211 Identities=16% Similarity=0.229 Sum_probs=161.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++++++|+++|+ +|+++.|+..... . ..+++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~~---------------------------~--~~~~~~~~~ 48 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDY---QIYAGARKVEQVP---------------------------Q--YNNVKAVHF 48 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSC---EEEEEESSGGGSC---------------------------C--CTTEEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCccchh---------------------------h--cCCceEEEe
Confidence 5799999999999999999999985 5689999753221 0 157899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|++++ .+....+++++|+|||+||.... ..+++|+.|+.+++++|++. ++++||++||.+++...
T Consensus 49 D~~d~------~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~--- 113 (219)
T 3dqp_A 49 DVDWT------PEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE--- 113 (219)
T ss_dssp CTTSC------HHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGG---
T ss_pred cccCC------HHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCC---
Confidence 99940 45556888999999999998652 25788999999999999987 88999999998876532
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
++.| ++. .+.+.|+.+|+.+|++++ ...+++++
T Consensus 114 ----~~~e----~~~--------------------------------------~~~~~Y~~sK~~~e~~~~-~~~~i~~~ 146 (219)
T 3dqp_A 114 ----KWIG----AGF--------------------------------------DALKDYYIAKHFADLYLT-KETNLDYT 146 (219)
T ss_dssp ----GCCS----HHH--------------------------------------HHTHHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred ----cccc----ccc--------------------------------------ccccHHHHHHHHHHHHHH-hccCCcEE
Confidence 1111 000 235789999999999996 34789999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
++||+.++|+... +.. .. ++...++++++|+|++++.++.... ..+++||++
T Consensus 147 ilrp~~v~g~~~~---~~~--------------------~~--~~~~~~~i~~~Dva~~i~~~l~~~~---~~g~~~~i~ 198 (219)
T 3dqp_A 147 IIQPGALTEEEAT---GLI--------------------DI--NDEVSASNTIGDVADTIKELVMTDH---SIGKVISMH 198 (219)
T ss_dssp EEEECSEECSCCC---SEE--------------------EE--SSSCCCCEEHHHHHHHHHHHHTCGG---GTTEEEEEE
T ss_pred EEeCceEecCCCC---Ccc--------------------cc--CCCcCCcccHHHHHHHHHHHHhCcc---ccCcEEEeC
Confidence 9999999997431 111 01 2567899999999999999986432 237899998
Q ss_pred cCCCCcccHHhHHHHH
Q 008315 333 SSLRNPVTLVSILDYG 348 (570)
Q Consensus 333 s~~~~~it~~el~~~~ 348 (570)
++ +.++.|+...-
T Consensus 199 ~g---~~~~~e~~~~~ 211 (219)
T 3dqp_A 199 NG---KTAIKEALESL 211 (219)
T ss_dssp EC---SEEHHHHHHTT
T ss_pred CC---CccHHHHHHHH
Confidence 86 48888887543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-24 Score=217.46 Aligned_cols=214 Identities=14% Similarity=0.161 Sum_probs=160.9
Q ss_pred EEEEECCccHhHHHHHHHHHHh--CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 14 IILVSGVTGFVAKVFIEKILRV--QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~--g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|||||||||||++++++|+++ |+ +|+++.|+..... .+. ..++.++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~---~V~~~~r~~~~~~---~~~------------------------~~~~~~~~ 50 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS---QIVAIVRNPAKAQ---ALA------------------------AQGITVRQ 50 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG---GEEEEESCTTTCH---HHH------------------------HTTCEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc---eEEEEEcChHhhh---hhh------------------------cCCCeEEE
Confidence 4899999999999999999998 65 4578899764321 111 14578999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g 171 (570)
+|+++ .+..+.+++++|+|||+||.. . ..|+.++++++++|++. ++++|||+||..++.
T Consensus 51 ~D~~d-------~~~~~~~~~~~d~vi~~a~~~-~--------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~---- 109 (286)
T 2zcu_A 51 ADYGD-------EAALTSALQGVEKLLLISSSE-V--------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADT---- 109 (286)
T ss_dssp CCTTC-------HHHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHHH-TCCEEEEEEETTTTT----
T ss_pred cCCCC-------HHHHHHHHhCCCEEEEeCCCC-c--------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCC----
Confidence 99994 444568889999999999962 1 25899999999999987 789999999987751
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcE
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~ 251 (570)
.+..|+.+|..+|+++.+ .++++
T Consensus 110 -------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~~~ 132 (286)
T 2zcu_A 110 -------------------------------------------------------SPLGLADEHIETEKMLAD--SGIVY 132 (286)
T ss_dssp -------------------------------------------------------CCSTTHHHHHHHHHHHHH--HCSEE
T ss_pred -------------------------------------------------------CcchhHHHHHHHHHHHHH--cCCCe
Confidence 134699999999999987 68999
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
+++||+.++++.. .++ .. ....|.. ..++++...++++++|+|++++.++.... ..+++||+
T Consensus 133 ~ilrp~~~~~~~~----~~~------~~---~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~i 194 (286)
T 2zcu_A 133 TLLRNGWYSENYL----ASA------PA---ALEHGVF--IGAAGDGKIASATRADYAAAAARVISEAG---HEGKVYEL 194 (286)
T ss_dssp EEEEECCBHHHHH----TTH------HH---HHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHHSSS---CTTCEEEE
T ss_pred EEEeChHHhhhhH----HHh------HH---hhcCCce--eccCCCCccccccHHHHHHHHHHHhcCCC---CCCceEEE
Confidence 9999988766421 111 11 1122332 24566788999999999999999886321 23689999
Q ss_pred ccCCCCcccHHhHHHHHhhhcccC
Q 008315 332 GSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 332 ~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
+++ .++|+.|+++.+.+.+|..
T Consensus 195 ~~~--~~~s~~e~~~~i~~~~g~~ 216 (286)
T 2zcu_A 195 AGD--SAWTLTQLAAELTKQSGKQ 216 (286)
T ss_dssp CCS--SCBCHHHHHHHHHHHHSSC
T ss_pred eCC--CcCCHHHHHHHHHHHHCCC
Confidence 987 7999999999999999875
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=221.59 Aligned_cols=235 Identities=14% Similarity=0.134 Sum_probs=170.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES-AALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++.++|||||||||+|++|++.|++.|++ |++++|+..... ..+++. ++ . ..+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~~~~~~-~l---------~-----------~~~v~ 63 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRP---TYILARPGPRSPSKAKIFK-AL---------E-----------DKGAI 63 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCC---EEEEECSSCCCHHHHHHHH-HH---------H-----------HTTCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCC---EEEEECCCCCChhHHHHHH-HH---------H-----------hCCcE
Confidence 56789999999999999999999999854 589999874322 111111 11 0 25789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
++.||+++ .+.+..+++ ++|+|||+||.. |+.++.+++++|++.+++++||+ |+ +
T Consensus 64 ~~~~Dl~d-------~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~ 120 (346)
T 3i6i_A 64 IVYGLINE-------QEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-SE---F 120 (346)
T ss_dssp EEECCTTC-------HHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-SC---C
T ss_pred EEEeecCC-------HHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-cc---c
Confidence 99999994 444568888 999999999973 88999999999999833999986 42 3
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 246 (570)
|.. ++|. .+. .+.+.|..+|+.+|+++++
T Consensus 121 g~~---~~e~-----~~~-----------------------------------------~p~~~y~~sK~~~e~~l~~-- 149 (346)
T 3i6i_A 121 GHD---VNRA-----DPV-----------------------------------------EPGLNMYREKRRVRQLVEE-- 149 (346)
T ss_dssp SSC---TTTC-----CCC-----------------------------------------TTHHHHHHHHHHHHHHHHH--
T ss_pred CCC---CCcc-----CcC-----------------------------------------CCcchHHHHHHHHHHHHHH--
Confidence 321 1121 111 2346899999999999988
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.++|.... ++... ......+....++++++...++++++|+|++++.++.... ..+
T Consensus 150 ~g~~~tivrpg~~~g~~~~---~~~~~-------~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~---~~~ 216 (346)
T 3i6i_A 150 SGIPFTYICCNSIASWPYY---NNIHP-------SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR---TLN 216 (346)
T ss_dssp TTCCBEEEECCEESSCCCS---CC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG---GTT
T ss_pred cCCCEEEEEecccccccCc---ccccc-------ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc---ccC
Confidence 6899999999999996432 21110 0011123344678899999999999999999999886432 125
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++||++++ .+++|+.|+++.+.+.+|+..
T Consensus 217 ~~~~i~g~-~~~~s~~e~~~~~~~~~g~~~ 245 (346)
T 3i6i_A 217 KSVHFRPS-CNCLNINELASVWEKKIGRTL 245 (346)
T ss_dssp EEEECCCG-GGEECHHHHHHHHHHHHTSCC
T ss_pred eEEEEeCC-CCCCCHHHHHHHHHHHHCCCC
Confidence 78888732 279999999999999998763
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=203.02 Aligned_cols=219 Identities=11% Similarity=0.005 Sum_probs=149.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ +|++++|+... +. ++ ...+++++.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~------~~-~~--------------------~~~~~~~~~~ 50 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGH---EVLAVVRDPQK------AA-DR--------------------LGATVATLVK 50 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH------HH-HH--------------------TCTTSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCC---EEEEEEecccc------cc-cc--------------------cCCCceEEec
Confidence 5799999999999999999999985 56889986422 11 11 1257899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|++++ +. ..++++|+|||+||...... ...+|+.++++++++|++. + ++||++||+.++....+.
T Consensus 51 D~~d~-------~~--~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~ 115 (224)
T 3h2s_A 51 EPLVL-------TE--ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGAD 115 (224)
T ss_dssp CGGGC-------CH--HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCS
T ss_pred ccccc-------cH--hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCC
Confidence 99954 32 56689999999999862212 2467999999999999998 6 999999998665432210
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-cCCCcE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-KENLSL 251 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-~~~lp~ 251 (570)
...++.++. ...+.+.|+.+|+.+|.+.... ..++++
T Consensus 116 -~~~~~~~~~-----------------------------------------~~~~~~~y~~sK~~~e~~~~~~~~~~i~~ 153 (224)
T 3h2s_A 116 -HPMILDFPE-----------------------------------------SAASQPWYDGALYQYYEYQFLQMNANVNW 153 (224)
T ss_dssp -SCGGGGCCG-----------------------------------------GGGGSTTHHHHHHHHHHHHHHTTCTTSCE
T ss_pred -ccccccCCC-----------------------------------------CCccchhhHHHHHHHHHHHHHHhcCCCcE
Confidence 000110000 0023578999999999653332 578999
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
+++||+.|+|+.. ..++... .. .++ .+....++++++|+|++++.++... ...+++|++
T Consensus 154 ~ivrp~~v~g~~~--~~~~~~~--------------~~-~~~-~~~~~~~~i~~~DvA~~~~~~l~~~---~~~g~~~~~ 212 (224)
T 3h2s_A 154 IGISPSEAFPSGP--ATSYVAG--------------KD-TLL-VGEDGQSHITTGNMALAILDQLEHP---TAIRDRIVV 212 (224)
T ss_dssp EEEEECSBCCCCC--CCCEEEE--------------SS-BCC-CCTTSCCBCCHHHHHHHHHHHHHSC---CCTTSEEEE
T ss_pred EEEcCccccCCCc--ccCceec--------------cc-ccc-cCCCCCceEeHHHHHHHHHHHhcCc---cccCCEEEE
Confidence 9999999999832 2222210 00 111 1334568999999999999999743 233789999
Q ss_pred ccCCCCcccH
Q 008315 332 GSSLRNPVTL 341 (570)
Q Consensus 332 ~s~~~~~it~ 341 (570)
++. ++.++
T Consensus 213 ~~~--~~~~~ 220 (224)
T 3h2s_A 213 RDA--DLEHH 220 (224)
T ss_dssp EEC--C----
T ss_pred ecC--cchhc
Confidence 986 44443
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=206.74 Aligned_cols=233 Identities=14% Similarity=0.107 Sum_probs=166.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++++++|++.++. .+|+++.|+.. ++. ++ ..++.++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g-~~V~~~~r~~~------~~~-~~---------------------~~~~~~~ 53 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSAQ------GKE-KI---------------------GGEADVF 53 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT-CEEEEEESCHH------HHH-HT---------------------TCCTTEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC-cEEEEEEcCCC------chh-hc---------------------CCCeeEE
Confidence 5789999999999999999999998322 35688888631 111 00 1457789
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc----------------cCHHHHHHHHHHHHHHHHHHHHHccCc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD----------------ERYDVAFGINTLGAIHLVNFAKKCVKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (570)
.+|+++ .+..+.+++++|+|||+||..... +.....+++|+.++.+++++|++. ++
T Consensus 54 ~~D~~d-------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~ 125 (253)
T 1xq6_A 54 IGDITD-------ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GV 125 (253)
T ss_dssp ECCTTS-------HHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TC
T ss_pred EecCCC-------HHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CC
Confidence 999994 444568889999999999975321 112345799999999999999987 78
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
++||++||..++.... +..+ .....|..+
T Consensus 126 ~~iv~~SS~~~~~~~~------------~~~~---------------------------------------~~~~~y~~s 154 (253)
T 1xq6_A 126 KHIVVVGSMGGTNPDH------------PLNK---------------------------------------LGNGNILVW 154 (253)
T ss_dssp SEEEEEEETTTTCTTC------------GGGG---------------------------------------GGGCCHHHH
T ss_pred CEEEEEcCccCCCCCC------------cccc---------------------------------------ccchhHHHH
Confidence 9999999998643210 0000 012458899
Q ss_pred HHHHHHHHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 235 KTMGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 235 K~~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
|+.+|.++++ .+++++++||+.|+|+..... .... + ....+.++ ..++++++|+|++++.
T Consensus 155 K~~~e~~~~~--~~i~~~~vrpg~v~~~~~~~~-~~~~---~-----------~~~~~~~~---~~~~~~~~Dva~~~~~ 214 (253)
T 1xq6_A 155 KRKAEQYLAD--SGTPYTIIRAGGLLDKEGGVR-ELLV---G-----------KDDELLQT---DTKTVPRADVAEVCIQ 214 (253)
T ss_dssp HHHHHHHHHT--SSSCEEEEEECEEECSCSSSS-CEEE---E-----------STTGGGGS---SCCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCceEEEecceeecCCcchh-hhhc---c-----------CCcCCcCC---CCcEEcHHHHHHHHHH
Confidence 9999999986 789999999999999754211 1111 0 00111111 2458999999999998
Q ss_pred HHHHhcCCCCCCceEEeccCCC-CcccHHhHHHHHhhhccc
Q 008315 315 AMVAHAKQPSDANIYHVGSSLR-NPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~~~-~~it~~el~~~~~~~~~~ 354 (570)
++.... ..+++||++++.. .++++.|+++.+.+.+|+
T Consensus 215 ~~~~~~---~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 215 ALLFEE---AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp HTTCGG---GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred HHcCcc---ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 886322 1368999998631 469999999999988775
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-23 Score=210.81 Aligned_cols=230 Identities=12% Similarity=0.027 Sum_probs=170.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+|+|||||||||+|++++++|++.| + +|+++.|+...... +.+. ..+++++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~---~V~~~~R~~~~~~~-~~l~------------------------~~~~~~~ 56 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF---KVRVVTRNPRKKAA-KELR------------------------LQGAEVV 56 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS---EEEEEESCTTSHHH-HHHH------------------------HTTCEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc---eEEEEEcCCCCHHH-HHHH------------------------HCCCEEE
Confidence 5899999999999999999999988 4 46789997654321 1111 1468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+..+.+++++|+|||+|+..... ....|+.++.+++++|++. ++++||++||..+++...
T Consensus 57 ~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~ 123 (299)
T 2wm3_A 57 QGDQDD-------QVIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTA 123 (299)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTT
T ss_pred EecCCC-------HHHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCC
Confidence 999994 444568889999999999853111 2457899999999999987 899999998877664211
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
. .+++.|..+|+.+|+++++ .+++
T Consensus 124 -----~-------------------------------------------------~~~~~y~~sK~~~e~~~~~--~gi~ 147 (299)
T 2wm3_A 124 -----G-------------------------------------------------RLAAAHFDGKGEVEEYFRD--IGVP 147 (299)
T ss_dssp -----T-------------------------------------------------SCCCHHHHHHHHHHHHHHH--HTCC
T ss_pred -----C-------------------------------------------------cccCchhhHHHHHHHHHHH--CCCC
Confidence 0 1357899999999999987 5899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCce-eecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPC-LVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~-~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
++++||+.++|+... .|.... ...|.... ....++...++++++|+|++++.++...... .+++|
T Consensus 148 ~~ilrp~~~~~~~~~---~~~~~~---------~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~--~g~~~ 213 (299)
T 2wm3_A 148 MTSVRLPCYFENLLS---HFLPQK---------APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKY--VGQNI 213 (299)
T ss_dssp EEEEECCEEGGGGGT---TTCCEE---------CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHH--TTCEE
T ss_pred EEEEeecHHhhhchh---hcCCcc---------cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhh--CCeEE
Confidence 999999999996432 122110 01221111 1234677899999999999999988643111 25799
Q ss_pred EeccCCCCcccHHhHHHHHhhhcccC
Q 008315 330 HVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
|+++ .++|+.|+++.+.+.+|+.
T Consensus 214 ~~~g---~~~s~~e~~~~~~~~~g~~ 236 (299)
T 2wm3_A 214 GLST---CRHTAEEYAALLTKHTRKV 236 (299)
T ss_dssp ECCS---EEECHHHHHHHHHHHHSSC
T ss_pred Eeee---ccCCHHHHHHHHHHHHCCC
Confidence 9975 4799999999999999875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=208.68 Aligned_cols=216 Identities=10% Similarity=0.068 Sum_probs=160.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++++++|++. |++ |++++|+...... ....+++++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~---V~~~~R~~~~~~~---------------------------~~~~~v~~~~ 50 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDH---FHIGVRNVEKVPD---------------------------DWRGKVSVRQ 50 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTT---EEEEESSGGGSCG---------------------------GGBTTBEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCc---EEEEECCHHHHHH---------------------------hhhCCCEEEE
Confidence 47999999999999999999887 755 5789997543211 1136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g 171 (570)
+|+++ .+..+.+++++|+|||+|+..... ..|+.++++++++|++. ++++||++||... ..
T Consensus 51 ~D~~d-------~~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~---~~- 111 (289)
T 3e48_A 51 LDYFN-------QESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQS-GVAHIIFIGYYAD---QH- 111 (289)
T ss_dssp CCTTC-------HHHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHHT-TCCEEEEEEESCC---ST-
T ss_pred cCCCC-------HHHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHHc-CCCEEEEEcccCC---CC-
Confidence 99994 444568889999999999976432 34899999999999997 8999999999432 11
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcE
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~ 251 (570)
.. +..+...+..+|..+.+ .++++
T Consensus 112 ---~~---------------------------------------------------~~~~~~~~~~~e~~~~~--~g~~~ 135 (289)
T 3e48_A 112 ---NN---------------------------------------------------PFHMSPYFGYASRLLST--SGIDY 135 (289)
T ss_dssp ---TC---------------------------------------------------CSTTHHHHHHHHHHHHH--HCCEE
T ss_pred ---CC---------------------------------------------------CCccchhHHHHHHHHHH--cCCCE
Confidence 00 11122223455666655 68999
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHH-hcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVAS-AQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
+++||+.++|+.. .| +... ..+. ...+.++...++++++|+|++++.++..... .+++||
T Consensus 136 ~ilrp~~~~~~~~----~~----------~~~~~~~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~g~~~~ 196 (289)
T 3e48_A 136 TYVRMAMYMDPLK----PY----------LPELMNMHK--LIYPAGDGRINYITRNDIARGVIAIIKNPDT---WGKRYL 196 (289)
T ss_dssp EEEEECEESTTHH----HH----------HHHHHHHTE--ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG---TTCEEE
T ss_pred EEEeccccccccH----HH----------HHHHHHCCC--EecCCCCceeeeEEHHHHHHHHHHHHcCCCc---CCceEE
Confidence 9999999998521 11 1111 1222 3345678899999999999999999874332 267999
Q ss_pred eccCCCCcccHHhHHHHHhhhcccC
Q 008315 331 VGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 331 ~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
++ + .++|+.|+++.+.+.+|+.
T Consensus 197 ~~-~--~~~s~~e~~~~~~~~~g~~ 218 (289)
T 3e48_A 197 LS-G--YSYDMKELAAILSEASGTE 218 (289)
T ss_dssp EC-C--EEEEHHHHHHHHHHHHTSC
T ss_pred eC-C--CcCCHHHHHHHHHHHHCCc
Confidence 99 7 8999999999999999875
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=202.40 Aligned_cols=207 Identities=16% Similarity=0.117 Sum_probs=156.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+|||||||||++++++|+++|+ +.+|+++.|+.... ..+++++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r~~~~~-------------------------------~~~~~~~ 51 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPARKALAE-------------------------------HPRLDNP 51 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBSSCCCC-------------------------------CTTEECC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeCCCccc-------------------------------CCCceEE
Confidence 468999999999999999999999885 12678888876431 2467888
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
.+|+++ .+..+.++ +|+|||+||.... .+.++..+++|+.++.+++++|++. ++++||++||..+++.
T Consensus 52 ~~D~~~-------~~~~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~- 120 (215)
T 2a35_A 52 VGPLAE-------LLPQLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK- 120 (215)
T ss_dssp BSCHHH-------HGGGCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred eccccC-------HHHHHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCC-
Confidence 999884 33333444 9999999997653 2567788999999999999999987 7899999999887642
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
+.+.|+.+|+.+|+++++ .++
T Consensus 121 ---------------------------------------------------------~~~~y~~sK~~~e~~~~~--~~~ 141 (215)
T 2a35_A 121 ---------------------------------------------------------SSIFYNRVKGELEQALQE--QGW 141 (215)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCC
T ss_pred ---------------------------------------------------------CccHHHHHHHHHHHHHHH--cCC
Confidence 246899999999999987 589
Q ss_pred c-EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCce
Q 008315 250 S-LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 250 p-~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
+ ++++||+.++|+... +.+...+. +....+ ++ ...++++++|+|++++.++... .+++
T Consensus 142 ~~~~~vrp~~v~g~~~~--~~~~~~~~-----------~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~-----~~~~ 200 (215)
T 2a35_A 142 PQLTIARPSLLFGPREE--FRLAEILA-----------APIARI-LP--GKYHGIEACDLARALWRLALEE-----GKGV 200 (215)
T ss_dssp SEEEEEECCSEESTTSC--EEGGGGTT-----------CCCC-------CHHHHHHHHHHHHHHHHHHTCC-----CSEE
T ss_pred CeEEEEeCceeeCCCCc--chHHHHHH-----------Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcC-----CCCc
Confidence 9 999999999998653 12222111 111111 12 2678999999999999988522 1679
Q ss_pred EEeccCCCCcccHH
Q 008315 329 YHVGSSLRNPVTLV 342 (570)
Q Consensus 329 yn~~s~~~~~it~~ 342 (570)
||++++ +++++.
T Consensus 201 ~~i~~~--~~~~~~ 212 (215)
T 2a35_A 201 RFVESD--ELRKLG 212 (215)
T ss_dssp EEEEHH--HHHHHH
T ss_pred eEEcHH--HHHHhh
Confidence 999987 555553
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=211.01 Aligned_cols=233 Identities=12% Similarity=0.071 Sum_probs=166.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|+++|++ |++++|+...... +.+. . ..+++++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~-~~l~-------------~----------~~~v~~v 56 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHH---VRAQVHSLKGLIA-EELQ-------------A----------IPNVTLF 56 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCSCSHHH-HHHH-------------T----------STTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCE---EEEEECCCChhhH-HHHh-------------h----------cCCcEEE
Confidence 4689999999999999999999998865 5788997654311 1111 0 1468899
Q ss_pred Ecc-CCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccC-ceEEEEEecccccCC
Q 008315 91 AGD-ISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVK-LKVFVHVSTAYVAGE 168 (570)
Q Consensus 91 ~gD-l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~-lk~fV~vSTa~v~~~ 168 (570)
.+| +++ .+....+++++|+|||+|+.... ..|+.+ ++++++|++. + +++|||+||.++..
T Consensus 57 ~~D~l~d-------~~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~- 118 (352)
T 1xgk_A 57 QGPLLNN-------VPLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSL- 118 (352)
T ss_dssp ESCCTTC-------HHHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGG-
T ss_pred ECCccCC-------HHHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCccccc-
Confidence 999 984 44456888999999999986421 347777 9999999987 6 89999999986310
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCC
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKEN 248 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~ 248 (570)
+.+ ..++.|..||+.+|+++++ .+
T Consensus 119 ---------~~~---------------------------------------------~~~~~y~~sK~~~E~~~~~--~g 142 (352)
T 1xgk_A 119 ---------YGP---------------------------------------------WPAVPMWAPKFTVENYVRQ--LG 142 (352)
T ss_dssp ---------TSS---------------------------------------------CCCCTTTHHHHHHHHHHHT--SS
T ss_pred ---------cCC---------------------------------------------CCCccHHHHHHHHHHHHHH--cC
Confidence 000 1246799999999999987 48
Q ss_pred CcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCc-eeecCCCceeecchH-HHHHHHHHHHHHHhcCCCCCC
Q 008315 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLP-CLVGETKTIMDVIPV-DMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 249 lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpV-Ddva~aii~a~~~~~~~~~~~ 326 (570)
++++|+||+ +||+...... ..-+.. .....|... .++++++...+++++ +|+|++++.++...... ..+
T Consensus 143 i~~~ivrpg-~~g~~~~~~~--~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~-~~g 213 (352)
T 1xgk_A 143 LPSTFVYAG-IYNNNFTSLP--YPLFQM-----ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNG 213 (352)
T ss_dssp SCEEEEEEC-EEGGGCBSSS--CSSCBE-----EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTT
T ss_pred CCEEEEecc-eecCCchhcc--cccccc-----cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh-hCC
Confidence 999999987 4665432110 000000 001123322 346778889999999 99999999998743110 126
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++||+++ .++|+.|+++.+.+.+|+.+
T Consensus 214 ~~~~l~~---~~~s~~e~~~~i~~~~G~~~ 240 (352)
T 1xgk_A 214 HRIALTF---ETLSPVQVCAAFSRALNRRV 240 (352)
T ss_dssp CEEEECS---EEECHHHHHHHHHHHHTSCE
T ss_pred eEEEEec---CCCCHHHHHHHHHHHHCCCC
Confidence 7999995 56999999999999998764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-23 Score=199.00 Aligned_cols=218 Identities=14% Similarity=0.096 Sum_probs=138.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ +|+++.|+.... . ++ ..+++++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~~~~------~-~~---------------------~~~~~~~~~ 49 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH---EVTAIVRNAGKI------T-QT---------------------HKDINILQK 49 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCSHHH------H-HH---------------------CSSSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC---EEEEEEcCchhh------h-hc---------------------cCCCeEEec
Confidence 5799999999999999999999985 568999975321 1 00 156899999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|++++ +. ..++++|+|||+||....+ ..+|+.++++++++|++. +.+++|++||..++....+
T Consensus 50 D~~d~-------~~--~~~~~~d~vi~~ag~~~~~------~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~- 112 (221)
T 3ew7_A 50 DIFDL-------TL--SDLSDQNVVVDAYGISPDE------AEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDED- 112 (221)
T ss_dssp CGGGC-------CH--HHHTTCSEEEECCCSSTTT------TTSHHHHHHHHHHHHCSC-CSSEEEEECCCC--------
T ss_pred cccCh-------hh--hhhcCCCEEEECCcCCccc------cchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCC-
Confidence 99954 32 5568999999999985322 456999999999999987 7899999999876543221
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCCCc
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KENLS 250 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~lp 250 (570)
..+..++.+. .+.+.|+.+|+.+|.+..-. ..+++
T Consensus 113 --~~~~~~~~~~-----------------------------------------~~~~~y~~~k~~~e~~~~~~~~~~gi~ 149 (221)
T 3ew7_A 113 --GNTLLESKGL-----------------------------------------REAPYYPTARAQAKQLEHLKSHQAEFS 149 (221)
T ss_dssp -------------------------------------------------------CCCSCCHHHHHHHHHHHHTTTTTSC
T ss_pred --CccccccCCC-----------------------------------------CCHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 0011000000 23467999999999973322 57899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.|+|+.. ..+.. . .. +....+.+++ .++++++|+|++++.++... ...+++||
T Consensus 150 ~~ivrp~~v~g~~~--~~~~~---~--------~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~---~~~g~~~~ 209 (221)
T 3ew7_A 150 WTYISPSAMFEPGE--RTGDY---Q--------IG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERP---NHLNEHFT 209 (221)
T ss_dssp EEEEECSSCCCCC--------------------------------------CCCHHHHHHHHHHHHHSC---SCTTSEEE
T ss_pred EEEEeCcceecCCC--ccCce---E--------ec-cccceecCCC---CceEeHHHHHHHHHHHHhCc---cccCCEEE
Confidence 99999999999722 11110 0 00 1111122222 26899999999999999743 23478999
Q ss_pred eccCCCCcccHHh
Q 008315 331 VGSSLRNPVTLVS 343 (570)
Q Consensus 331 ~~s~~~~~it~~e 343 (570)
++++ .+.+..|
T Consensus 210 ~~~~--~~~~~~~ 220 (221)
T 3ew7_A 210 VAGK--LEHHHHH 220 (221)
T ss_dssp CCC----------
T ss_pred ECCC--Ccccccc
Confidence 9987 5555543
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=197.37 Aligned_cols=211 Identities=18% Similarity=0.139 Sum_probs=153.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||||++++++|+++|+. .+|+++.|+....... ...++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~-~~V~~~~r~~~~~~~~---------------------------~~~~~~~ 67 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF-SKVTLIGRRKLTFDEE---------------------------AYKNVNQ 67 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC-SEEEEEESSCCCCCSG---------------------------GGGGCEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC-CEEEEEEcCCCCcccc---------------------------ccCCceE
Confidence 57899999999999999999999999961 2568899976542110 0146788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
+.+|+++ .+..+.+++++|+|||+||.......++..+++|+.|+.+++++|++. ++++||++||..+++.
T Consensus 68 ~~~D~~d-------~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~- 138 (242)
T 2bka_A 68 EVVDFEK-------LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 138 (242)
T ss_dssp EECCGGG-------GGGGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred EecCcCC-------HHHHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCC-
Confidence 9999994 343457788999999999986555556778899999999999999987 7889999999987642
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
..+.|+.||+.+|.+++. .++
T Consensus 139 ---------------------------------------------------------~~~~Y~~sK~~~e~~~~~--~~~ 159 (242)
T 2bka_A 139 ---------------------------------------------------------SNFLYLQVKGEVEAKVEE--LKF 159 (242)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHHT--TCC
T ss_pred ---------------------------------------------------------CcchHHHHHHHHHHHHHh--cCC
Confidence 135799999999999987 467
Q ss_pred -cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCce
Q 008315 250 -SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 250 -p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
+++++||+.|+|+...+. ....+..... +..+...+ ...+++++|+|++++.++... ....+
T Consensus 160 ~~~~~vrpg~v~~~~~~~~--------~~~~~~~~~~-~~~~~~~~----~~~~~~~~dva~~~~~~~~~~----~~~~~ 222 (242)
T 2bka_A 160 DRYSVFRPGVLLCDRQESR--------PGEWLVRKFF-GSLPDSWA----SGHSVPVVTVVRAMLNNVVRP----RDKQM 222 (242)
T ss_dssp SEEEEEECCEEECTTGGGS--------HHHHHHHHHH-CSCCTTGG----GGTEEEHHHHHHHHHHHHTSC----CCSSE
T ss_pred CCeEEEcCceecCCCCCCc--------HHHHHHHHhh-cccCcccc----CCcccCHHHHHHHHHHHHhCc----cccCe
Confidence 599999999999754220 0111112221 22211111 234899999999999988532 12356
Q ss_pred EEecc
Q 008315 329 YHVGS 333 (570)
Q Consensus 329 yn~~s 333 (570)
|++.+
T Consensus 223 ~~~~~ 227 (242)
T 2bka_A 223 ELLEN 227 (242)
T ss_dssp EEEEH
T ss_pred eEeeH
Confidence 66644
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-22 Score=188.22 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=149.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+|||||||||++++++|+++|+ +|+++.|++.... .....+++++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~~~~~---------------------------~~~~~~~~~~ 51 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDSSRLP---------------------------SEGPRPAHVV 51 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCGGGSC---------------------------SSSCCCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeChhhcc---------------------------cccCCceEEE
Confidence 358999999999999999999999985 5688998753221 0012578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+..+.+++++|+|||+|+.....+. .++|+.++.+++++|++. ++++||++||..+++...
T Consensus 52 ~~D~~~-------~~~~~~~~~~~d~vi~~a~~~~~~~~----~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 52 VGDVLQ-------AADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPT 119 (206)
T ss_dssp ESCTTS-------HHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTT
T ss_pred EecCCC-------HHHHHHHHcCCCEEEECccCCCCCCc----cchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcc
Confidence 999994 44456888999999999997654222 248999999999999987 789999999999886532
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
+ . + ...+.|..+|+.+|+++++ .+++
T Consensus 120 ~----~------~------------------------------------------~~~~~y~~~K~~~e~~~~~--~~i~ 145 (206)
T 1hdo_A 120 K----V------P------------------------------------------PRLQAVTDDHIRMHKVLRE--SGLK 145 (206)
T ss_dssp C----S------C------------------------------------------GGGHHHHHHHHHHHHHHHH--TCSE
T ss_pred c----c------c------------------------------------------ccchhHHHHHHHHHHHHHh--CCCC
Confidence 1 0 0 0246799999999999976 6899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.++... ..+.... .+.+.+. .++++++|+|++++.++... ...+++||
T Consensus 146 ~~~lrp~~~~~~~---~~~~~~~-----------------~~~~~~~--~~~i~~~Dva~~~~~~~~~~---~~~g~~~~ 200 (206)
T 1hdo_A 146 YVAVMPPHIGDQP---LTGAYTV-----------------TLDGRGP--SRVISKHDLGHFMLRCLTTD---EYDGHSTY 200 (206)
T ss_dssp EEEECCSEEECCC---CCSCCEE-----------------ESSSCSS--CSEEEHHHHHHHHHHTTSCS---TTTTCEEE
T ss_pred EEEEeCCcccCCC---CCcceEe-----------------cccCCCC--CCccCHHHHHHHHHHHhcCc---ccccccee
Confidence 9999999984321 1111100 0001111 48999999999999888532 22478999
Q ss_pred eccC
Q 008315 331 VGSS 334 (570)
Q Consensus 331 ~~s~ 334 (570)
++++
T Consensus 201 i~~g 204 (206)
T 1hdo_A 201 PSHQ 204 (206)
T ss_dssp EECC
T ss_pred eecc
Confidence 9886
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.7e-22 Score=200.52 Aligned_cols=239 Identities=12% Similarity=0.144 Sum_probs=165.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHH--HHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAA--LRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~--~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|||||||+|++++++|+++|++ |++++|+.....+. +.+. + + ...++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~~-~---------~-----------~~~~~~~ 59 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHP---TYVLFRPEVVSNIDKVQMLL-Y---------F-----------KQLGAKL 59 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCSCCSSCHHHHHHHH-H---------H-----------HTTTCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCc---EEEEECCCcccchhHHHHHH-H---------H-----------HhCCeEE
Confidence 478999999999999999999999865 57899986543221 1111 0 0 0256899
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
+.+|+++ .+.+..+++++|+|||+|+..... .|+.++.+++++|++.+++++||+ |+ ++..
T Consensus 60 ~~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~ 120 (313)
T 1qyd_A 60 IEASLDD-------HQRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMD 120 (313)
T ss_dssp ECCCSSC-------HHHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSC
T ss_pred EeCCCCC-------HHHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCC
Confidence 9999994 444568889999999999976542 278899999999999833999985 42 3321
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
.... + .+.. ...+.| .+|+.+|+++++ .++
T Consensus 121 ~~~~-~------~~~~----------------------------------------p~~~~y-~sK~~~e~~~~~--~g~ 150 (313)
T 1qyd_A 121 PDIM-E------HALQ----------------------------------------PGSITF-IDKRKVRRAIEA--ASI 150 (313)
T ss_dssp TTSC-C------CCCS----------------------------------------STTHHH-HHHHHHHHHHHH--TTC
T ss_pred cccc-c------cCCC----------------------------------------CCcchH-HHHHHHHHHHHh--cCC
Confidence 1000 0 0100 113568 999999999986 689
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++++||+.+++.....+..... .....+....++++++...++++++|+|++++.++..... .+++|
T Consensus 151 ~~~ilrp~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~ 218 (313)
T 1qyd_A 151 PYTYVSSNMFAGYFAGSLAQLDG---------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT---LNKTM 218 (313)
T ss_dssp CBCEEECCEEHHHHTTTSSCTTC---------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG---SSSEE
T ss_pred CeEEEEeceeccccccccccccc---------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc---CCceE
Confidence 99999999998854321111100 0000111223557788999999999999999988863321 25677
Q ss_pred EeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 330 HVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 330 n~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++++ .+++|+.|+++.+.+.+|+..
T Consensus 219 ~~~g~-~~~~s~~e~~~~~~~~~g~~~ 244 (313)
T 1qyd_A 219 YIRPP-MNILSQKEVIQIWERLSEQNL 244 (313)
T ss_dssp ECCCG-GGEEEHHHHHHHHHHHHTCCC
T ss_pred EEeCC-CCccCHHHHHHHHHHhcCCCC
Confidence 77643 168999999999999998753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-21 Score=194.67 Aligned_cols=236 Identities=13% Similarity=0.133 Sum_probs=160.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-CcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-DTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+++|+|||||||+|++++++|+++|++ |++++|+. ....+.++.. .+. .+. ..+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~-~~~------~l~-----------~~~v~~v 60 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNP---TYALVRKTITAANPETKEE-LID------NYQ-----------SLGVILL 60 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCC---EEEEECCSCCSSCHHHHHH-HHH------HHH-----------HTTCEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCc---EEEEECCCcccCChHHHHH-HHH------HHH-----------hCCCEEE
Confidence 578999999999999999999999965 47899986 2222201111 000 010 1468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 61 ~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~ 117 (307)
T 2gas_A 61 EGDIND-------HETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV 117 (307)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT
T ss_pred EeCCCC-------HHHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-cc---cccCc
Confidence 999994 4445688899999999999754 4578899999998833999984 32 33211
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
+|. .+..+ ..+.| .+|+.+|+++++ .+++
T Consensus 118 ---~~~-----~~~~p----------------------------------------~~~~y-~sK~~~e~~~~~--~~i~ 146 (307)
T 2gas_A 118 ---DRH-----DAVEP----------------------------------------VRQVF-EEKASIRRVIEA--EGVP 146 (307)
T ss_dssp ---TSC-----CCCTT----------------------------------------HHHHH-HHHHHHHHHHHH--HTCC
T ss_pred ---ccc-----cCCCc----------------------------------------chhHH-HHHHHHHHHHHH--cCCC
Confidence 110 01100 12478 999999999986 5899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.+++.... .+.... .....+....++++++...++++++|+|++++.++..... .+++|+
T Consensus 147 ~~~lrp~~~~~~~~~---~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~ 213 (307)
T 2gas_A 147 YTYLCCHAFTGYFLR---NLAQLD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT---LNKAVH 213 (307)
T ss_dssp BEEEECCEETTTTGG---GTTCTT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG---TTEEEE
T ss_pred eEEEEcceeeccccc---cccccc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc---cCceEE
Confidence 999999999875431 111100 0000111224567888899999999999999998863321 256677
Q ss_pred eccCCCCcccHHhHHHHHhhhcccCC
Q 008315 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 331 ~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+.++ .+.+|+.|+++.+.+..|+..
T Consensus 214 ~~~~-~~~~s~~e~~~~~~~~~g~~~ 238 (307)
T 2gas_A 214 IRLP-KNYLTQNEVIALWEKKIGKTL 238 (307)
T ss_dssp CCCG-GGEEEHHHHHHHHHHHHTSCC
T ss_pred EeCC-CCcCCHHHHHHHHHHHhCCCC
Confidence 6542 168999999999999998753
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.4e-21 Score=195.21 Aligned_cols=226 Identities=15% Similarity=0.171 Sum_probs=158.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|||||||+|++++++|+++|++ |++++|+..... +.+. ++ . ..+++++.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~--~~~~-~l---------~-----------~~~v~~v~~ 65 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHP---TYVFTRPNSSKT--TLLD-EF---------Q-----------SLGAIIVKG 65 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECTTCSCH--HHHH-HH---------H-----------HTTCEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCc---EEEEECCCCchh--hHHH-Hh---------h-----------cCCCEEEEe
Confidence 58999999999999999999999865 578999865221 1111 00 0 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCCe
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGL 172 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g~ 172 (570)
|+++ .+.+..+++++|+|||+|+... +.++++++++|++.+++++||+ |+ +|...
T Consensus 66 Dl~d-------~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~-- 120 (318)
T 2r6j_A 66 ELDE-------HEKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVEE-- 120 (318)
T ss_dssp CTTC-------HHHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSCT--
T ss_pred cCCC-------HHHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccCc--
Confidence 9994 4445688899999999999642 5678999999999833999985 43 33211
Q ss_pred eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcEE
Q 008315 173 ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSLV 252 (570)
Q Consensus 173 i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~~ 252 (570)
+|. .+..+ ..+.| .+|+.+|+++++ .+++++
T Consensus 121 -~~~-----~~~~p----------------------------------------~~~~y-~sK~~~e~~~~~--~~~~~~ 151 (318)
T 2r6j_A 121 -DRI-----NALPP----------------------------------------FEALI-ERKRMIRRAIEE--ANIPYT 151 (318)
T ss_dssp -TTC-----CCCHH----------------------------------------HHHHH-HHHHHHHHHHHH--TTCCBE
T ss_pred -ccc-----cCCCC----------------------------------------cchhH-HHHHHHHHHHHh--cCCCeE
Confidence 110 11100 02468 999999999987 689999
Q ss_pred EEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 253 IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
++||+.+++... . .++.....+....++++++...++++++|+|++++.++..... .+++|+++
T Consensus 152 ~lr~~~~~~~~~-------~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~~~ 215 (318)
T 2r6j_A 152 YVSANCFASYFI-------N------YLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA---LNRVVIYR 215 (318)
T ss_dssp EEECCEEHHHHH-------H------HHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG---TTEEEECC
T ss_pred EEEcceehhhhh-------h------hhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc---cCeEEEec
Confidence 999998876311 1 1111111222334567888999999999999999988863321 25677765
Q ss_pred c-CCCCcccHHhHHHHHhhhcccCC
Q 008315 333 S-SLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 333 s-~~~~~it~~el~~~~~~~~~~~p 356 (570)
+ + +.+|+.|+++.+.+.+|+..
T Consensus 216 g~~--~~~s~~e~~~~~~~~~g~~~ 238 (318)
T 2r6j_A 216 PST--NIITQLELISRWEKKIGKKF 238 (318)
T ss_dssp CGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred CCC--CccCHHHHHHHHHHHhCCCC
Confidence 4 4 68999999999999998753
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.8e-21 Score=195.65 Aligned_cols=230 Identities=13% Similarity=0.154 Sum_probs=161.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-CcccH--HHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-DTESA--ALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-~~~~~--~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..|+|+|||||||+|+++++.|+++|++ |+++.|+. ....+ .+.+. + +. ..++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~R~~~~~~~~~~~~~l~-~---------~~-----------~~~v 58 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHP---TFIYARPLTPDSTPSSVQLRE-E---------FR-----------SMGV 58 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCC---EEEEECCCCTTCCHHHHHHHH-H---------HH-----------HTTC
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCc---EEEEECCcccccChHHHHHHH-H---------hh-----------cCCc
Confidence 3578999999999999999999999865 57899986 32211 11111 0 00 2568
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccC-ceEEEEEeccccc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVK-LKVFVHVSTAYVA 166 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~-lk~fV~vSTa~v~ 166 (570)
+++.+|+++ .+.+..+++++|+|||+|+... +.++.+++++|++. + +++||+ |+ +
T Consensus 59 ~~v~~D~~d-------~~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~-g~v~~~v~-S~---~ 114 (321)
T 3c1o_A 59 TIIEGEMEE-------HEKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAA-GNIKRFLP-SD---F 114 (321)
T ss_dssp EEEECCTTC-------HHHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHH-CCCCEEEC-SC---C
T ss_pred EEEEecCCC-------HHHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHh-CCccEEec-cc---c
Confidence 999999994 4445688899999999999742 56789999999998 6 999983 32 3
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhc
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSK 246 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~ 246 (570)
+... +|. .+..+ ..+.| .+|+.+|+++++
T Consensus 115 g~~~---~~~-----~~~~p----------------------------------------~~~~y-~sK~~~e~~~~~-- 143 (321)
T 3c1o_A 115 GCEE---DRI-----KPLPP----------------------------------------FESVL-EKKRIIRRAIEA-- 143 (321)
T ss_dssp SSCG---GGC-----CCCHH----------------------------------------HHHHH-HHHHHHHHHHHH--
T ss_pred ccCc---ccc-----ccCCC----------------------------------------cchHH-HHHHHHHHHHHH--
Confidence 3211 111 11100 12469 999999999986
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHH---HHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFV---ASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~---~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
.+++++++||+.+++.... .+.. ....+.....+++++...++++++|+|++++.++.....
T Consensus 144 ~~~~~~~lrp~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-- 208 (321)
T 3c1o_A 144 AALPYTYVSANCFGAYFVN-------------YLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC-- 208 (321)
T ss_dssp HTCCBEEEECCEEHHHHHH-------------HHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG--
T ss_pred cCCCeEEEEeceecccccc-------------ccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc--
Confidence 5799999999998874210 1100 001222234567888999999999999999998874321
Q ss_pred CCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 324 SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 324 ~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++|+++++ ..++|+.|+++.+.+.+|+..
T Consensus 209 -~g~~~~~~g~-~~~~t~~e~~~~~~~~~g~~~ 239 (321)
T 3c1o_A 209 -CNRIVIYRPP-KNIISQNELISLWEAKSGLSF 239 (321)
T ss_dssp -TTEEEECCCG-GGEEEHHHHHHHHHHHHTSCC
T ss_pred -cCeEEEEeCC-CCcccHHHHHHHHHHHcCCcc
Confidence 2577777642 168999999999999998753
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-20 Score=184.83 Aligned_cols=240 Identities=16% Similarity=0.161 Sum_probs=167.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+.+ +.+. ..++.+
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~-------------~~~~------~~~~~~ 68 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADDH---GQKVCN-------------NIGS------PDVISF 68 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH-------------HHCC------TTTEEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCChhH---HHHHHH-------------HhCC------CCceEE
Confidence 5899999999999999999999999996 45677775321 111111 1110 136899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc---------cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD---------ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~---------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++...
T Consensus 69 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 141 (278)
T 2bgk_A 69 VHCDVTK-------DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMI 141 (278)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHG
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 9999995 333345544 799999999975321 346778999999999999988763
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||..++.... +....
T Consensus 142 ~~~~~~iv~isS~~~~~~~~-------------------------------------------------------~~~~~ 166 (278)
T 2bgk_A 142 PAKKGSIVFTASISSFTAGE-------------------------------------------------------GVSHV 166 (278)
T ss_dssp GGTCEEEEEECCGGGTCCCT-------------------------------------------------------TSCHH
T ss_pred hcCCCeEEEEeeccccCCCC-------------------------------------------------------CCCcc
Confidence 2467999999988764321 12457
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.. ..+++++++||+.|+++......+ . .......+..+. +.....++++
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~---~~~~~~~~~~~~-------~~~~~~~~~~ 233 (278)
T 2bgk_A 167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG---V---DSSRVEELAHQA-------ANLKGTLLRA 233 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS---C---CHHHHHHHHHHT-------CSSCSCCCCH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc---c---chhHHHHhhhcc-------cccccccCCH
Confidence 999999999998765 358999999999999975432111 0 011111111110 1122357899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhc
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~ 352 (570)
+|+|++++.++.... ....+++|++.++ ..+++.|+++.+.+.+
T Consensus 234 ~dva~~~~~l~~~~~-~~~~G~~~~v~gg--~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 234 EDVADAVAYLAGDES-KYVSGLNLVIDGG--YTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHHHHHHHSGGG-TTCCSCEEEESTT--GGGCCTHHHHHSCSCC
T ss_pred HHHHHHHHHHcCccc-ccCCCCEEEECCc--ccccCCccchhhhhhc
Confidence 999999998885432 2234789999998 7899999999887643
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.8e-21 Score=194.28 Aligned_cols=235 Identities=13% Similarity=0.159 Sum_probs=161.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE-SAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~-~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++|+|||||||+|+++++.|+++|+. |++++|+.... .+ ++.. .+. .+ ...+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~---V~~l~R~~~~~~~~-~~~~-~~~------~l-----------~~~~v~~v 61 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHP---TFLLVRESTASSNS-EKAQ-LLE------SF-----------KASGANIV 61 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCC---EEEECCCCCTTTTH-HHHH-HHH------HH-----------HTTTCEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCC---EEEEECCcccccCH-HHHH-HHH------HH-----------HhCCCEEE
Confidence 478999999999999999999999865 57899986543 11 1111 000 00 02568999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+.+..+++++|+|||+|+... +.++.+++++|++.+++++||+ |+ +|...
T Consensus 62 ~~D~~d-------~~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~ 118 (308)
T 1qyc_A 62 HGSIDD-------HASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV 118 (308)
T ss_dssp CCCTTC-------HHHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT
T ss_pred EeccCC-------HHHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc
Confidence 999994 4445688889999999999742 5577899999999833999984 43 23211
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
+|. .+..+ ..+.| .+|+.+|+++++ .+++
T Consensus 119 ---~~~-----~~~~p----------------------------------------~~~~y-~sK~~~e~~~~~--~~~~ 147 (308)
T 1qyc_A 119 ---DNV-----HAVEP----------------------------------------AKSVF-EVKAKVRRAIEA--EGIP 147 (308)
T ss_dssp ---TSC-----CCCTT----------------------------------------HHHHH-HHHHHHHHHHHH--HTCC
T ss_pred ---ccc-----ccCCc----------------------------------------chhHH-HHHHHHHHHHHh--cCCC
Confidence 110 11100 12468 999999999987 5799
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.+++.....+..+.. ....+....++++++...++++++|+|++++.++.... ..+++|+
T Consensus 148 ~~~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~ 214 (308)
T 1qyc_A 148 YTYVSSNCFAGYFLRSLAQAGL----------TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR---TLNKTLY 214 (308)
T ss_dssp BEEEECCEEHHHHTTTTTCTTC----------SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG---GTTEEEE
T ss_pred eEEEEeceeccccccccccccc----------cCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc---ccCeEEE
Confidence 9999999998854321111000 00012223566788899999999999999988775321 1256777
Q ss_pred eccCCCCcccHHhHHHHHhhhcccCC
Q 008315 331 VGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 331 ~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
++++ .+++|+.|+++.+.+.+|+..
T Consensus 215 ~~g~-~~~~s~~e~~~~~~~~~g~~~ 239 (308)
T 1qyc_A 215 LRLP-ANTLSLNELVALWEKKIDKTL 239 (308)
T ss_dssp CCCG-GGEEEHHHHHHHHHHHTTSCC
T ss_pred EeCC-CCccCHHHHHHHHHHHhCCCC
Confidence 7643 168999999999999998753
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=184.61 Aligned_cols=239 Identities=11% Similarity=0.084 Sum_probs=154.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++++++|++.|+ +|+++.|+..... . .+.+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------------------------------~---~~~~ 44 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH---TVIGIDRGQADIE-------------------------------A---DLST 44 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSEE-------------------------------C---CTTS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEeCChhHcc-------------------------------c---cccC
Confidence 5899999999999999999999985 4678888754311 1 1456
Q ss_pred cCCCCCCCCChhhhHHHHhC----CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc---cCceEEEEEecccc
Q 008315 93 DISSEDLGLKDSNLKEELWN----ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC---VKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~----~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV~vSTa~v 165 (570)
|++ +.+..+.+++ ++|+|||+||.....++++..+++|+.|+.+++++|.+. .+.+++|++||..+
T Consensus 45 D~~-------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 45 PGG-------RETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp HHH-------HHHHHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred Ccc-------cHHHHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 776 3443445554 899999999987655678889999999999999988764 24589999999998
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
++..... .+ ..+.. . ..+++........ .....+.|+.||+.+|.+++.+
T Consensus 118 ~~~~~~~---~~--------~~~~~--~----------~~~~~~~~~~~~~-------~~~~~~~Y~~sK~a~~~~~~~~ 167 (255)
T 2dkn_A 118 TQPGAAE---LP--------MVEAM--L----------AGDEARAIELAEQ-------QGQTHLAYAGSKYAVTCLARRN 167 (255)
T ss_dssp GSTTGGG---CH--------HHHHH--H----------HTCHHHHHHHHHH-------HCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccc---cc--------hhhhh--c----------ccchhhhhhhccc-------cCCcchhHHHHHHHHHHHHHHH
Confidence 8653210 00 00000 0 0111111100000 0013468999999999998875
Q ss_pred -----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 246 -----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 246 -----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..+++++++||+.|+++.... +..... .... .. .+. + ...++++++|+|++++.++....
T Consensus 168 ~~~~~~~gi~v~~v~pg~v~~~~~~~---~~~~~~-~~~~----~~----~~~--~-~~~~~~~~~dva~~~~~l~~~~~ 232 (255)
T 2dkn_A 168 VVDWAGRGVRLNVVAPGAVETPLLQA---SKADPR-YGES----TR----RFV--A-PLGRGSEPREVAEAIAFLLGPQA 232 (255)
T ss_dssp HHHHHHTTCEEEEEEECCBCSHHHHH---HHHCTT-THHH----HH----SCC--C-TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhcCcEEEEEcCCcccchhhhh---cccchh-hHHH----HH----HHH--H-HhcCCCCHHHHHHHHHHHhCCCc
Confidence 258999999999998863211 000000 0000 00 000 1 33478999999999999886432
Q ss_pred CCCCCCceEEeccCCCCcccHHh
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVS 343 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~e 343 (570)
. ...+++|+++++ ..++..|
T Consensus 233 ~-~~~G~~~~v~gg--~~~~~~e 252 (255)
T 2dkn_A 233 S-FIHGSVLFVDGG--MDALMRA 252 (255)
T ss_dssp T-TCCSCEEEESTT--HHHHHCT
T ss_pred c-cceeeEEEecCC--eEeeeec
Confidence 1 224789999987 5555543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-19 Score=180.83 Aligned_cols=239 Identities=13% Similarity=0.098 Sum_probs=155.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+||||||+|+||++++++|++.|+ +|+++.|+..... .+. ++. ..++.++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~---~~~-------------~~~--------~~~~~~~ 56 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD---TVIGTARRTEALD---DLV-------------AAY--------PDRAEAI 56 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGGH---HHH-------------HHC--------TTTEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHHHH---HHH-------------Hhc--------cCCceEE
Confidence 689999999999999999999999995 4578888754321 111 111 2578999
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHH----HHHHHHcc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHL----VNFAKKCV 152 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~l----l~~a~~~~ 152 (570)
.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+..+ +..+++.
T Consensus 57 ~~Dv~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~- 128 (281)
T 3m1a_A 57 SLDVTD-------GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER- 128 (281)
T ss_dssp ECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred EeeCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 999995 333345444 78999999997532 134677899999995544 4444544
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... ...+.|+
T Consensus 129 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (281)
T 3m1a_A 129 GSGSVVNISSFGGQLSF--------------------------------------------------------AGFSAYS 152 (281)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------CCchHHH
Confidence 56899999997765321 1346899
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCc-cccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGW-VEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw-~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..|.+++.+ ..+++++++||+.|.++...+.... ................ . ........+++++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~ 226 (281)
T 3m1a_A 153 ATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ----L--VQGSDGSQPGDPA 226 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH----H--HHC-----CBCHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH----H--HhhccCCCCCCHH
Confidence 9999999998765 3589999999999988754332211 1111111010100000 0 0112234567899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhc
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYF 352 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~ 352 (570)
|+|++++.++... ..+..|+++++ ......+....+.+.+
T Consensus 227 dva~a~~~~~~~~----~~~~~~~l~s~--~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 227 KAAAAIRLALDTE----KTPLRLALGGD--AVDFLTGHLDSVRAEL 266 (281)
T ss_dssp HHHHHHHHHHHSS----SCCSEEEESHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC----CCCeEEecCch--HHHHHHHHHHHHHHHH
Confidence 9999999998632 22568999886 5555555555555443
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-19 Score=175.86 Aligned_cols=224 Identities=15% Similarity=0.134 Sum_probs=154.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 64 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA---SVVVSDINADA---ANHVVDE---------IQQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHHHH---------HHHh---------CCceEE
Confidence 6899999999999999999999999985 46788886421 1111111 1111 246888
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc------ccCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF------DERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 65 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~ 137 (255)
T 1fmc_A 65 CRCDITS-------EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 9999995 333345544 79999999997543 1346778999999999999988531 25
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..+||++||...+... ...+.|+.
T Consensus 138 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 161 (255)
T 1fmc_A 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEEcchhhcCCC--------------------------------------------------------CCCcccHH
Confidence 6899999998776421 12467999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+++.+ ..++++.++||+.|+++.... +. ...+......+. ....+++++|+
T Consensus 162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~---~~-----~~~~~~~~~~~~---------~~~~~~~~~dv 224 (255)
T 1fmc_A 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VI-----TPEIEQKMLQHT---------PIRRLGQPQDI 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TC-----CHHHHHHHHHTC---------SSCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh---cc-----ChHHHHHHHhcC---------CcccCCCHHHH
Confidence 999999988765 348999999999998864321 10 011222222221 12346789999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccCCCCccc
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT 340 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~~~~~it 340 (570)
|++++.++..... ...+++|+++++ ...|
T Consensus 225 a~~~~~l~~~~~~-~~~G~~~~v~gg--~~~s 253 (255)
T 1fmc_A 225 ANAALFLCSPAAS-WVSGQILTVSGG--GVQE 253 (255)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT--SCCC
T ss_pred HHHHHHHhCCccc-cCCCcEEEECCc--eecc
Confidence 9999988753322 123789999988 5554
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=5.5e-19 Score=173.67 Aligned_cols=217 Identities=16% Similarity=0.179 Sum_probs=151.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+|||||||||++++++|++.|+ +|+++.|+... .+.+. ++ ..++++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA---KVVAVTRTNSD---LVSLA-------------KE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------Hh---------ccCCCc
Confidence 5789999999999999999999999996 45788886421 11111 11 134677
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC-ce
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK-LK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~-lk 155 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++... .+ ..
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~ 129 (244)
T 1cyd_A 57 VCVDLGD-------WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 129 (244)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEecCCC-------HHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCe
Confidence 8999994 443456665 489999999975431 346678999999999999988653 13 57
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||..++... .....|+.||
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 153 (244)
T 1cyd_A 130 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 153 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEcchhhcCCC--------------------------------------------------------CCcchhHHHH
Confidence 99999998776432 1235799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..|.+++.+ ..++++.++||+.|+++..... + ....++..+..+. ...++++++|+|+
T Consensus 154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~-----~~~~~~~~~~~~~---------~~~~~~~~~dva~ 217 (244)
T 1cyd_A 154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--S-----ADPEFARKLKERH---------PLRKFAEVEDVVN 217 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--T-----CCHHHHHHHHHHS---------TTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--c-----cCHHHHHHHHhcC---------CccCCCCHHHHHH
Confidence 9999998765 2589999999999988643110 0 0011222222211 1257899999999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++.++..... ...++++++.++
T Consensus 218 ~~~~l~~~~~~-~~~G~~~~v~gG 240 (244)
T 1cyd_A 218 SILFLLSDRSA-STSGGGILVDAG 240 (244)
T ss_dssp HHHHHHSGGGT-TCCSSEEEESTT
T ss_pred HHHHHhCchhh-cccCCEEEECCC
Confidence 99988864322 223778888776
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=171.74 Aligned_cols=217 Identities=17% Similarity=0.227 Sum_probs=150.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 56 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA---RVVAVSRTQAD---LDSLV-------------RE---------CPGIEP 56 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------STTCEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH---------cCCCCE
Confidence 5899999999999999999999999986 46788886321 11111 11 124567
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC-ce
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK-LK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~-lk 155 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++... .+ ..
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~ 129 (244)
T 3d3w_A 57 VCVDLGD-------WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPG 129 (244)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCC-------HHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCc
Confidence 7999994 443456665 589999999975432 346778999999999999988653 13 57
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+... .....|+.||
T Consensus 130 ~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 153 (244)
T 3d3w_A 130 AIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCSTK 153 (244)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEeCchhhccCC--------------------------------------------------------CCCchHHHHH
Confidence 89999998765321 1246799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..|.+++.+ ..+++++++||+.|+++.... .+.+. .....+..+. ...++++++|+|+
T Consensus 154 ~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~-----~~~~~~~~~~---------~~~~~~~~~dva~ 217 (244)
T 3d3w_A 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA--TWSDP-----HKAKTMLNRI---------PLGKFAEVEHVVN 217 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHH--HSCST-----THHHHHHHTC---------TTCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhh--hccCh-----HHHHHHHhhC---------CCCCCcCHHHHHH
Confidence 9999998765 357999999999998864321 01000 0111111111 1236789999999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++.++..... ...+++|++.++
T Consensus 218 ~~~~l~~~~~~-~~~G~~~~v~gG 240 (244)
T 3d3w_A 218 AILFLLSDRSG-MTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHcCcccc-CCCCCEEEECCC
Confidence 99988864322 224789999876
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.1e-19 Score=178.71 Aligned_cols=241 Identities=11% Similarity=0.072 Sum_probs=162.8
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. +.+++.. ..++.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~--------~~~~~ 79 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMDV---LKATA---------EQISSQT--------GNKVH 79 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHH--------SSCEE
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHhc--------CCceE
Confidence 36889999999999999999999999996 46788886421 11111 1122211 25689
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 80 ~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 152 (302)
T 1w6u_A 80 AIQCDVRD-------PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 152 (302)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999995 333334443 56999999996432 1346778999999999998888542
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||.+.+... .....
T Consensus 153 ~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (302)
T 1w6u_A 153 AQKGAAFLSITTIYAETGS--------------------------------------------------------GFVVP 176 (302)
T ss_dssp TTCCEEEEEECCTHHHHCC--------------------------------------------------------TTCHH
T ss_pred hcCCCEEEEEcccccccCC--------------------------------------------------------CCcch
Confidence 245799999998765321 12467
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCC-CCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK-EPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~-~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..|.+++.+ ..+++++++||+.|.++.. ... ... . .....+..+. ....+++
T Consensus 177 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~--~--~~~~~~~~~~---------p~~~~~~ 240 (302)
T 1w6u_A 177 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL---DPT--G--TFEKEMIGRI---------PCGRLGT 240 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C---CTT--S--HHHHHHHTTC---------TTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhc---ccc--h--hhHHHHHhcC---------CcCCCCC
Confidence 999999999998765 3589999999999987621 111 000 0 0011111111 1124678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
++|+|++++.++.... ....+++|++.++ ..+++.++++.+.+..++
T Consensus 241 ~~dva~~~~~l~~~~~-~~~~G~~~~v~gg--~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 241 VEELANLAAFLCSDYA-SWINGAVIKFDGG--EEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp HHHHHHHHHHHTSGGG-TTCCSCEEEESTT--HHHHHHSTTGGGGGCCHH
T ss_pred HHHHHHHHHHHcCCcc-cccCCCEEEECCC--eeeccCCccccchhhccc
Confidence 9999999998875332 2224789999998 778888888777766543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.81 E-value=6.9e-19 Score=172.50 Aligned_cols=203 Identities=13% Similarity=0.144 Sum_probs=135.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..|+||||||||+||++++++|++.|. .+|+++.|+..... .....++.++
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~--~~V~~~~R~~~~~~---------------------------~~~~~~~~~~ 72 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQT--IKQTLFARQPAKIH---------------------------KPYPTNSQII 72 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT--EEEEEEESSGGGSC---------------------------SSCCTTEEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCC--ceEEEEEcChhhhc---------------------------ccccCCcEEE
Confidence 357999999999999999999999882 25678898754321 1113578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+..+.+++++|+|||+|+...+. .+++++++++++. ++++||++||..+++...
T Consensus 73 ~~Dl~d-------~~~~~~~~~~~D~vv~~a~~~~~~-----------~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~ 133 (236)
T 3qvo_A 73 MGDVLN-------HAALKQAMQGQDIVYANLTGEDLD-----------IQANSVIAAMKAC-DVKRLIFVLSLGIYDEVP 133 (236)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEEECCSTTHH-----------HHHHHHHHHHHHT-TCCEEEEECCCCC-----
T ss_pred EecCCC-------HHHHHHHhcCCCEEEEcCCCCchh-----------HHHHHHHHHHHHc-CCCEEEEEecceecCCCC
Confidence 999994 444568889999999999863321 3567899999887 789999999999887543
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
+... .+.+ ..+..+...|..+|..+.+ .+++
T Consensus 134 ~~~~--~~~~---------------------------------------------~~~~~~~~~~~~~~~~l~~--~gi~ 164 (236)
T 3qvo_A 134 GKFV--EWNN---------------------------------------------AVIGEPLKPFRRAADAIEA--SGLE 164 (236)
T ss_dssp ----------------------------------------------------------CGGGHHHHHHHHHHHT--SCSE
T ss_pred cccc--cchh---------------------------------------------hcccchHHHHHHHHHHHHH--CCCC
Confidence 1100 0000 0122334445556666654 7899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEE
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYH 330 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn 330 (570)
++++||+.+++...... ............+++++|||++++.++..... ..+++|+
T Consensus 165 ~~~vrPg~i~~~~~~~~----------------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~--~~g~~~~ 220 (236)
T 3qvo_A 165 YTILRPAWLTDEDIIDY----------------------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEK--HIGENIG 220 (236)
T ss_dssp EEEEEECEEECCSCCCC----------------------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTT--TTTEEEE
T ss_pred EEEEeCCcccCCCCcce----------------------EEeccCCCCCCcEECHHHHHHHHHHHHcCccc--ccCeeEE
Confidence 99999999988643211 01111111123579999999999999974332 2378999
Q ss_pred eccC
Q 008315 331 VGSS 334 (570)
Q Consensus 331 ~~s~ 334 (570)
++++
T Consensus 221 i~~~ 224 (236)
T 3qvo_A 221 INQP 224 (236)
T ss_dssp EECS
T ss_pred ecCC
Confidence 9886
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=5.9e-19 Score=170.95 Aligned_cols=202 Identities=16% Similarity=0.187 Sum_probs=139.7
Q ss_pred CEEEEECCccHhHHHHHHHHH-HhCCCccEEEEEEecCC-cccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLLIRAAD-TESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll-~~g~~V~~i~~lvR~~~-~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
|+|+||||||+||++++++|+ +.|+ +|+++.|+.. ... . +. . ...++.++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~~~~~~~---~----~~---------~---------~~~~~~~~ 57 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQLKTRIP---P----EI---------I---------DHERVTVI 57 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESSHHHHSC---H----HH---------H---------TSTTEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecCccccch---h----hc---------c---------CCCceEEE
Confidence 679999999999999999999 7885 5678888643 211 1 10 0 12578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.+|+++ .+..+.+++++|+|||+||.. |+. ++++++++++. ++++||++||..+++...
T Consensus 58 ~~D~~d-------~~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~ 116 (221)
T 3r6d_A 58 EGSFQN-------PGXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFP 116 (221)
T ss_dssp ECCTTC-------HHHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSC
T ss_pred ECCCCC-------HHHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCC
Confidence 999994 444568889999999999964 445 89999999887 789999999999876432
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
+...+ .. .. ...+.|..+|..+|.++++ .+++
T Consensus 117 ~~~~~----------------~~-----------------~~-------------~~~~~y~~~K~~~e~~~~~--~~i~ 148 (221)
T 3r6d_A 117 VALEK----------------WT-----------------FD-------------NLPISYVQGERQARNVLRE--SNLN 148 (221)
T ss_dssp HHHHH----------------HH-----------------HH-------------TSCHHHHHHHHHHHHHHHH--SCSE
T ss_pred ccccc----------------cc-----------------cc-------------ccccHHHHHHHHHHHHHHh--CCCC
Confidence 10000 00 00 1234899999999999987 7899
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHH--HHhcCCCCCCce
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM--VAHAKQPSDANI 328 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~--~~~~~~~~~~~i 328 (570)
++++||+.|+++.. .+ ..............+++.+|+|++++.++ ..... ..++.
T Consensus 149 ~~~vrpg~v~~~~~---~~------------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~--~~~~~ 205 (221)
T 3r6d_A 149 YTILRLTWLYNDPE---XT------------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADETP--FHRTS 205 (221)
T ss_dssp EEEEEECEEECCTT---CC------------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGG--GTTEE
T ss_pred EEEEechhhcCCCC---Cc------------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhh--hhcce
Confidence 99999999988621 11 01111111111123789999999999998 53321 12456
Q ss_pred EEeccC
Q 008315 329 YHVGSS 334 (570)
Q Consensus 329 yn~~s~ 334 (570)
+.++.+
T Consensus 206 ~~i~~~ 211 (221)
T 3r6d_A 206 IGVGEP 211 (221)
T ss_dssp EEEECT
T ss_pred eeecCC
Confidence 666654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-18 Score=168.06 Aligned_cols=223 Identities=14% Similarity=0.145 Sum_probs=152.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+. +.++.. ..++.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~---------~~~~~~ 66 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA---RVIIADLDEAM---ATKAV---------EDLRME---------GHDVSS 66 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHhc---------CCceEE
Confidence 5789999999999999999999999985 46788886421 11111 112111 246899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC-c---c----cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK-F---D----ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~-f---~----~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... . . +.++..+++|+.|+.++++++...
T Consensus 67 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 139 (260)
T 3awd_A 67 VVMDVTN-------TESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLE 139 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence 9999995 333334443 7999999999654 1 1 235677999999999999988652
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||.+.+....+ .+...|
T Consensus 140 ~~~~~iv~~sS~~~~~~~~~------------------------------------------------------~~~~~Y 165 (260)
T 3awd_A 140 QKQGVIVAIGSMSGLIVNRP------------------------------------------------------QQQAAY 165 (260)
T ss_dssp HTCEEEEEECCGGGTSCCSS------------------------------------------------------SCCHHH
T ss_pred cCCCEEEEEecchhcccCCC------------------------------------------------------CCcccc
Confidence 25689999999876532110 112679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|+++...+ .... ..+...+..+. ....+++++
T Consensus 166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~------~~~~-~~~~~~~~~~~---------~~~~~~~~~ 229 (260)
T 3awd_A 166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF------GMEK-PELYDAWIAGT---------PMGRVGQPD 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH------HHTC-HHHHHHHHHTC---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc------ccCC-hHHHHHHHhcC---------CcCCCCCHH
Confidence 99999999998765 258999999999999875420 0000 11222222221 112478899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... ...+++|++.++
T Consensus 230 dva~~~~~l~~~~~~-~~~G~~~~v~gg 256 (260)
T 3awd_A 230 EVASVVQFLASDAAS-LMTGAIVNVDAG 256 (260)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-cCCCcEEEECCc
Confidence 999999988754322 224789999886
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-18 Score=171.87 Aligned_cols=246 Identities=13% Similarity=0.100 Sum_probs=150.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+.+++ ..... ...++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~~~------~~~~~~~ 62 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA---KVTITGRHAER---LEETRQQI---------LAAGV------SEQNVNS 62 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhccc------CCCceeE
Confidence 5789999999999999999999999996 45788886321 11221111 10000 0246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 135 (278)
T 1spx_A 63 VVADVTT-------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 135 (278)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EecccCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999995 333345554 79999999997532 2335677999999999999988653
Q ss_pred ---cCceEEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 152 ---VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 152 ---~~lk~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+ .++|++||... +... ..
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~--------------------------------------------------------~~ 158 (278)
T 1spx_A 136 LSSTK-GEIVNISSIASGLHAT--------------------------------------------------------PD 158 (278)
T ss_dssp HHHHT-CEEEEECCTTSSSSCC--------------------------------------------------------TT
T ss_pred HhhcC-CeEEEEecccccccCC--------------------------------------------------------CC
Confidence 14 79999999875 3221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+.+.. ..+++++++||+.|.++.......-................. .+ ...+
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~p-----~~~~ 229 (278)
T 1spx_A 159 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----VP-----AGVM 229 (278)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----CT-----TSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc----CC-----CcCC
Confidence 357999999999988764 358999999999998864321100000000000001111110 01 1246
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhh
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVY 351 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~ 351 (570)
++++|+|++++.++......-..++++++.++ ..+++.++++.+.+.
T Consensus 230 ~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG--~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 230 GQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG--SSLIMGLHCQDFAKL 276 (278)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT--GGGC-----------
T ss_pred CCHHHHHHHHHHHcCccccCcccCcEEEECCC--cccccCcccccHHHH
Confidence 88999999999887543221023789999988 789999999887654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-19 Score=171.59 Aligned_cols=182 Identities=15% Similarity=0.127 Sum_probs=136.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|+++ +|+++.|+... .+.+. ++. .. .++.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-----~V~~~~r~~~~---~~~~~-------------~~~---------~~-~~~~~ 49 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-----DLLLSGRRAGA---LAELA-------------REV---------GA-RALPA 49 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-----EEEEECSCHHH---HHHHH-------------HHH---------TC-EECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-----CEEEEECCHHH---HHHHH-------------Hhc---------cC-cEEEe
Confidence 68999999999999999999985 67888885321 11111 111 12 78889
Q ss_pred cCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 93 DISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++++. +..+||++||
T Consensus 50 D~~~-------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS 121 (207)
T 2yut_A 50 DLAD-------ELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGA 121 (207)
T ss_dssp CTTS-------HHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECC
T ss_pred eCCC-------HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcC
Confidence 9994 443456666 899999999976431 346778999999999999999554 6789999999
Q ss_pred ccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHH
Q 008315 163 AYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIM 242 (570)
Q Consensus 163 a~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v 242 (570)
..++... ...+.|+.||+..|.++
T Consensus 122 ~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~~~~~ 145 (207)
T 2yut_A 122 YPRYVQV--------------------------------------------------------PGFAAYAAAKGALEAYL 145 (207)
T ss_dssp CHHHHSS--------------------------------------------------------TTBHHHHHHHHHHHHHH
T ss_pred hhhccCC--------------------------------------------------------CCcchHHHHHHHHHHHH
Confidence 8876321 12468999999999998
Q ss_pred HHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 243 QQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 243 ~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
+.+ ..+++++++||+.|+++... +.+....++++++|+|++++.++.
T Consensus 146 ~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------------------------~~~~~~~~~~~~~dva~~~~~~~~ 197 (207)
T 2yut_A 146 EAARKELLREGVHLVLVRLPAVATGLWA----------------------------PLGGPPKGALSPEEAARKVLEGLF 197 (207)
T ss_dssp HHHHHHHHTTTCEEEEECCCCBCSGGGG----------------------------GGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhCCEEEEEecCcccCCCcc----------------------------ccCCCCCCCCCHHHHHHHHHHHHh
Confidence 765 25899999999999875310 011223578999999999998885
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-19 Score=176.64 Aligned_cols=224 Identities=20% Similarity=0.247 Sum_probs=151.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|+++|.. |+++.|+... .+.+. ++. ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 58 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGAT---VAIADIDIER---ARQAA-------------AEI--------GPAAYA 58 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-------------HHh--------CCCceE
Confidence 58999999999999999999999999964 5677775321 11111 111 256789
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++...
T Consensus 59 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (259)
T 4e6p_A 59 VQMDVTR-------QDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQ 131 (259)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 333345544 799999999975432 446778899999999999988653
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+.-.++|++||...+... .....|
T Consensus 132 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (259)
T 4e6p_A 132 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVAIY 155 (259)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred CCCeEEEEECChhhccCC--------------------------------------------------------CCChHH
Confidence 113589999998765321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhc---CCCceeecCCCceeecc
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ---GNLPCLVGETKTIMDVI 303 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~---G~~~~~~~~~~~~~d~V 303 (570)
+.||+..|.+.+.. ..++++.+++|+.|.++..+.. ..++..... +......++......+.
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 225 (259)
T 4e6p_A 156 CATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV----------DALFARYENRPRGEKKRLVGEAVPFGRMG 225 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH----------HHHHHHHHTCCTTHHHHHHHHHSTTSSCB
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh----------hhhhhhhccCChHHHHHHHhccCCCCCCc
Confidence 99999999998765 4589999999999988643211 011111100 00001111222345688
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++|+|++++.++..... .-.+++|++.+|
T Consensus 226 ~~~dva~~v~~L~s~~~~-~itG~~i~vdgG 255 (259)
T 4e6p_A 226 TAEDLTGMAIFLASAESD-YIVSQTYNVDGG 255 (259)
T ss_dssp CTHHHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCccC-CCCCCEEEECcC
Confidence 999999999887753322 234789999887
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=170.71 Aligned_cols=220 Identities=15% Similarity=0.164 Sum_probs=148.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+.++ +++.. ..++.+
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~ 61 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS---TVIITGTSGER---AKAVAEE---------IANKY--------GVKAHG 61 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH---------HHHHH--------CCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHH---------HHhhc--------CCceEE
Confidence 5789999999999999999999999985 46788885321 1122111 11111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+.+. .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (248)
T 2pnf_A 62 VEMNLLS-------EESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134 (248)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333345554 799999999976431 346678999999997777665321 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||....... .....|+
T Consensus 135 ~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (248)
T 2pnf_A 135 RWGRIVNISSVVGFTGN--------------------------------------------------------VGQVNYS 158 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhcCCC--------------------------------------------------------CCCchHH
Confidence 56899999997654221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..+++++++||+.|.++.....+ ......+..+. ....+++++|
T Consensus 159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~d 220 (248)
T 2pnf_A 159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS---------EEIKQKYKEQI---------PLGRFGSPEE 220 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---------HHHHHHHHHTC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc---------HHHHHHHHhcC---------CCCCccCHHH
Confidence 9999999888764 35899999999999876432111 11111111111 1134789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ....+++|++.++
T Consensus 221 va~~~~~l~~~~~-~~~~G~~~~v~gg 246 (248)
T 2pnf_A 221 VANVVLFLCSELA-SYITGEVIHVNGG 246 (248)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCchh-hcCCCcEEEeCCC
Confidence 9999998886432 2224789999876
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-18 Score=173.19 Aligned_cols=227 Identities=15% Similarity=0.127 Sum_probs=151.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|++.|+ +|+++.|... ...+.+.++ ++.. ..++.+
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~---~v~~~~r~~~--~~~~~~~~~---------l~~~---------~~~~~~ 75 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA---SVVVNYGSSS--KAAEEVVAE---------LKKL---------GAQGVA 75 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEcCCch--HHHHHHHHH---------HHhc---------CCcEEE
Confidence 5789999999999999999999999985 4577888321 111111111 1111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++... ++
T Consensus 76 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 148 (274)
T 1ja9_A 76 IQADISK-------PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 148 (274)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999995 333345554 799999999976431 335678999999999999998764 13
Q ss_pred ceEEEEEeccccc-CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 154 LKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 154 lk~fV~vSTa~v~-~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
.+||++||..++ ... .....|+
T Consensus 149 -~~iv~~sS~~~~~~~~--------------------------------------------------------~~~~~Y~ 171 (274)
T 1ja9_A 149 -GRIILTSSIAAVMTGI--------------------------------------------------------PNHALYA 171 (274)
T ss_dssp -EEEEEECCGGGTCCSC--------------------------------------------------------CSCHHHH
T ss_pred -CEEEEEcChHhccCCC--------------------------------------------------------CCCchHH
Confidence 699999998776 321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCC-----CCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEP-----FPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p-----~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
.||+..|.+++.+ ..++.++++||+.|.++.... .+....... .......+..+ ....++
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~ 241 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMP-QEKIDEGLANM---------NPLKRI 241 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCC-HHHHHHHHHHT---------STTSSC
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCc-hHHHHHHHHhc---------CCCCCc
Confidence 9999999998765 348999999999998753211 000000100 01111112211 123467
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++|+|++++.++..... ...+++|+++++
T Consensus 242 ~~~~dva~~i~~l~~~~~~-~~~G~~~~v~gG 272 (274)
T 1ja9_A 242 GYPADIGRAVSALCQEESE-WINGQVIKLTGG 272 (274)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCcccc-cccCcEEEecCC
Confidence 8999999999988864322 123789999876
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.2e-18 Score=167.70 Aligned_cols=220 Identities=12% Similarity=0.124 Sum_probs=148.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce-E
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI-T 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv-~ 88 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+ +. ..++ .
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 61 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA---RLILIDREAAA---LDRAAQ-------------EL--------GAAVAA 61 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH-------------HH--------GGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH-------------Hh--------ccccee
Confidence 5899999999999999999999999985 46788886421 111111 11 1345 8
Q ss_pred EEEccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
++.+|+++ .+..+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~~D~~~-------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (254)
T 2wsb_A 62 RIVADVTD-------AEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR 134 (254)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCC-------HHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 89999995 33333443 5799999999975432 335677899999988887766431 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||...+....+ .+.+.|+
T Consensus 135 ~~~~iv~isS~~~~~~~~~------------------------------------------------------~~~~~Y~ 160 (254)
T 2wsb_A 135 GAGAIVNLGSMSGTIVNRP------------------------------------------------------QFASSYM 160 (254)
T ss_dssp TCEEEEEECCGGGTSCCSS------------------------------------------------------SCBHHHH
T ss_pred CCcEEEEEecchhccCCCC------------------------------------------------------CcchHHH
Confidence 5689999999876542210 1236899
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..+++++++||+.|+++.....+ ........+..+. ....+++++|
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~d 224 (254)
T 2wsb_A 161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR-------ERPELFETWLDMT---------PMGRCGEPSE 224 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH-------TCHHHHHHHHHTS---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc-------cChHHHHHHHhcC---------CCCCCCCHHH
Confidence 9999999988764 34899999999999886432110 0011122222211 1134789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... ...++++++.++
T Consensus 225 va~~~~~l~~~~~~-~~~G~~~~v~gG 250 (254)
T 2wsb_A 225 IAAAALFLASPAAS-YVTGAILAVDGG 250 (254)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-cccCCEEEECCC
Confidence 99999988754322 224789999876
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-18 Score=171.95 Aligned_cols=232 Identities=12% Similarity=0.069 Sum_probs=147.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ ++..... ......++.+
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~~--~~~~~~~~~~ 67 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGA---TVAACDLDRAA---AQETVRL---------LGGPGSK--EGPPRGNHAA 67 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHT---------C--------------CCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHHHH---------HHhcCcc--ccccCcceEE
Confidence 5789999999999999999999999985 46788886422 1111111 1000000 0000146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhCC-------c-cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNE-------L-DVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~-------v-diVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~- 152 (570)
+.+|+++ .+..+.++++ + |+|||+||..... +.++..+++|+.|+.++++++... .
T Consensus 68 ~~~D~~~-------~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 140 (264)
T 2pd6_A 68 FQADVSE-------ARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVS 140 (264)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHh
Confidence 9999995 3333444443 4 9999999976431 346778999999999999988763 1
Q ss_pred -C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 153 -K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 153 -~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
+ ..+||++||....... .....
T Consensus 141 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 164 (264)
T 2pd6_A 141 NGCRGSIINISSIVGKVGN--------------------------------------------------------VGQTN 164 (264)
T ss_dssp HTCCEEEEEECCTHHHHCC--------------------------------------------------------TTBHH
T ss_pred cCCCceEEEECChhhccCC--------------------------------------------------------CCChh
Confidence 2 4689999998654221 12467
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.. ..+++++++||+.|+++.....+. .+...+..+ .....++++
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~---------~~~~~~~~~ 226 (264)
T 2pd6_A 165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ---------KVVDKITEM---------IPMGHLGDP 226 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGG---------CTTCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH---------HHHHHHHHh---------CCCCCCCCH
Confidence 999999999888764 358999999999999875422110 011001110 111246789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHH
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLV 342 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~ 342 (570)
+|+|++++.++.... ....++++++.++ ..+++.
T Consensus 227 ~dva~~~~~l~~~~~-~~~~G~~~~v~gg--~~~~~~ 260 (264)
T 2pd6_A 227 EDVADVVAFLASEDS-GYITGTSVEVTGG--LFMAEN 260 (264)
T ss_dssp HHHHHHHHHHHSGGG-TTCCSCEEEESTT--C-----
T ss_pred HHHHHHHHHHcCCcc-cCCCCCEEEECCC--ceeccc
Confidence 999999998876432 2234789999887 444443
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.5e-18 Score=168.81 Aligned_cols=207 Identities=17% Similarity=0.221 Sum_probs=148.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|. +|+++.|+..... ..++.+
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~------------------------------~~~~~~ 72 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNY---RVVATSRSIKPSA------------------------------DPDIHT 72 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSCCCCS------------------------------STTEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhhcc------------------------------cCceEE
Confidence 4789999999999999999999999996 4578888654321 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|++||+||..... +.++..+++|+.|+.++++++.. + .
T Consensus 73 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 145 (260)
T 3un1_A 73 VAGDISK-------PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ 145 (260)
T ss_dssp EESCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333345544 799999999975421 34677899999999999998742 1 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||..+.....+ .....|+
T Consensus 146 ~~g~iv~isS~~~~~~~~~------------------------------------------------------~~~~~Y~ 171 (260)
T 3un1_A 146 GSGHIVSITTSLVDQPMVG------------------------------------------------------MPSALAS 171 (260)
T ss_dssp TCEEEEEECCTTTTSCBTT------------------------------------------------------CCCHHHH
T ss_pred CCcEEEEEechhhccCCCC------------------------------------------------------CccHHHH
Confidence 5679999999876532210 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++++.+++|+.|.++...+ .. ...... ......+..++|
T Consensus 172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---------~~---~~~~~~---------~~p~~r~~~~~d 230 (260)
T 3un1_A 172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---------ET---HSTLAG---------LHPVGRMGEIRD 230 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---------GG---HHHHHT---------TSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---------HH---HHHHhc---------cCCCCCCcCHHH
Confidence 9999999988764 347999999999998865421 00 111111 112235678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.+.. ...-.|+++++.+|
T Consensus 231 va~av~~L~~---~~~itG~~i~vdGG 254 (260)
T 3un1_A 231 VVDAVLYLEH---AGFITGEILHVDGG 254 (260)
T ss_dssp HHHHHHHHHH---CTTCCSCEEEESTT
T ss_pred HHHHHHHhcc---cCCCCCcEEEECCC
Confidence 9999998832 22234889999887
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.4e-18 Score=166.76 Aligned_cols=221 Identities=14% Similarity=0.139 Sum_probs=151.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec-CCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA-ADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~-~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+ .... +.+.+++ +.. ..++.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~---~~~~~~~---------~~~---------~~~~~ 60 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA---KVGLHGRKAPANI---DETIASM---------RAD---------GGDAA 60 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCCTTH---HHHHHHH---------HHT---------TCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEECCCchhhH---HHHHHHH---------Hhc---------CCceE
Confidence 5889999999999999999999999986 46788887 3322 1111111 111 24688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCcc-CCc---c----cCHHHHHHHHHHHHHHHHHHHHHc-c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAI-TKF---D----ERYDVAFGINTLGAIHLVNFAKKC-V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~-v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (570)
++.+|+++ .+..+.+++ ++|+|||+||. ... . +.++..+++|+.|+.++++++... .
T Consensus 61 ~~~~D~~~-------~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 133 (258)
T 3afn_B 61 FFAADLAT-------SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLA 133 (258)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999995 333345554 79999999997 321 1 235677899999999999877532 1
Q ss_pred --C--c---eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 153 --K--L---KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 153 --~--l---k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
+ . .++|++||.+.+....
T Consensus 134 ~~~~~~~~~~~iv~~sS~~~~~~~~------------------------------------------------------- 158 (258)
T 3afn_B 134 AAAKASGQTSAVISTGSIAGHTGGG------------------------------------------------------- 158 (258)
T ss_dssp HHHHHHTSCEEEEEECCTHHHHCCC-------------------------------------------------------
T ss_pred hcccCCCCCcEEEEecchhhccCCC-------------------------------------------------------
Confidence 1 2 7899999987653100
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..|.+++.+ ..+++++++||+.|.++..... ...+...+..+. ...
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~---------~~~ 220 (258)
T 3afn_B 159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---------TQDVRDRISNGI---------PMG 220 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---------CHHHHHHHHTTC---------TTC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---------CHHHHHHHhccC---------CCC
Confidence 12467999999999998764 3489999999999988654321 012222222221 123
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++++|+|++++.++.......-.+++|++.++
T Consensus 221 ~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg 254 (258)
T 3afn_B 221 RFGTAEEMAPAFLFFASHLASGYITGQVLDINGG 254 (258)
T ss_dssp SCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred cCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence 6789999999999888643220123789999886
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-17 Score=166.80 Aligned_cols=230 Identities=17% Similarity=0.193 Sum_probs=151.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+.++ +++.. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~--------~~~~~~ 61 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA---HIVLVARQVDR---LHEAARS---------LKEKF--------GVRVLE 61 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHH--------CCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHHHH---------HHHhc--------CCceEE
Confidence 5789999999999999999999999996 45788886421 1111111 11111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 134 (263)
T 3ai3_A 62 VAVDVAT-------PEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR 134 (263)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333345444 79999999997542 1346778999999999999987542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 135 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (263)
T 3ai3_A 135 GGGAIIHNASICAVQPL--------------------------------------------------------WYEPIYN 158 (263)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------CCcchHH
Confidence 56899999998876432 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCccccccc-hHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVEDLKT-INALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~~~-~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..|.+.+.. ..+++++++||+.|.++..... +.+...... .......+..+. .....++.+
T Consensus 159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~ 230 (263)
T 3ai3_A 159 VTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------APIKRFASP 230 (263)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCBCH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCcCH
Confidence 9999999988764 3589999999999988642110 000000000 011111111110 012357899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++.... ....+++|++.++
T Consensus 231 ~dvA~~~~~l~s~~~-~~~~G~~~~vdgG 258 (263)
T 3ai3_A 231 EELANFFVFLCSERA-TYSVGSAYFVDGG 258 (263)
T ss_dssp HHHHHHHHHHTSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCccc-cCCCCcEEEECCC
Confidence 999999998875322 2224789999887
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.78 E-value=7.8e-18 Score=167.77 Aligned_cols=220 Identities=15% Similarity=0.142 Sum_probs=137.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 67 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEYE---LNECLSK---------WQKK---------GFQVTG 67 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCeeEE
Confidence 5789999999999999999999999996 45788885321 1111111 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 68 ~~~D~~~-------~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~ 140 (266)
T 1xq1_A 68 SVCDASL-------RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 140 (266)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 33333444 578999999997542 1346678999999999999988421
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 141 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 164 (266)
T 1xq1_A 141 SGCGNIIFMSSIAGVVSA--------------------------------------------------------SVGSIY 164 (266)
T ss_dssp HSSCEEEEEC------------------------------------------------------------------CCHH
T ss_pred cCCcEEEEEccchhccCC--------------------------------------------------------CCCchH
Confidence 256899999998765321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.. ..+++++++||+.|+++...... + ..+...... ......+++++
T Consensus 165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~-----~~~~~~~~~---------~~~~~~~~~~~ 227 (266)
T 1xq1_A 165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---D-----DEFKKVVIS---------RKPLGRFGEPE 227 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGG
T ss_pred HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---C-----HHHHHHHHh---------cCCCCCCcCHH
Confidence 99999999988764 34899999999999987542210 0 000000000 01122467899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... ...++++++.++
T Consensus 228 dva~~~~~l~~~~~~-~~~G~~~~v~gG 254 (266)
T 1xq1_A 228 EVSSLVAFLCMPAAS-YITGQTICVDGG 254 (266)
T ss_dssp GGHHHHHHHTSGGGT-TCCSCEEECCCC
T ss_pred HHHHHHHHHcCcccc-CccCcEEEEcCC
Confidence 999999888753322 224789999887
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.4e-18 Score=170.12 Aligned_cols=245 Identities=16% Similarity=0.158 Sum_probs=165.3
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-+++|+|+||||+|+||++++++|+++|. +|+++.|+... .+...++ +++..+ ...++.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~~------~~~~~~ 66 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA---SVMIVGRNPDK---LAGAVQE---------LEALGA------NGGAIR 66 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTTCC------SSCEEE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHHhCC------CCceEE
Confidence 36899999999999999999999999996 45777776422 1111111 111110 013789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||... +. +.++..+++|+.|+.++++++...
T Consensus 67 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 139 (281)
T 3svt_A 67 YEPTDITN-------EDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMV 139 (281)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999995 333334443 6899999999732 11 346778999999999999988653
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|++||...+... .....
T Consensus 140 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 163 (281)
T 3svt_A 140 RGGGGSFVGISSIAASNTH--------------------------------------------------------RWFGA 163 (281)
T ss_dssp HTTCEEEEEECCHHHHSCC--------------------------------------------------------TTCTH
T ss_pred hcCCcEEEEEeCHHHcCCC--------------------------------------------------------CCChh
Confidence 133489999998776322 12468
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.+ ..++.+.+++|+.|.++..... .........+..+. ....+..+
T Consensus 164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~~ 227 (281)
T 3svt_A 164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI-------TESAELSSDYAMCT---------PLPRQGEV 227 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHHHC---------SSSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-------ccCHHHHHHHHhcC---------CCCCCCCH
Confidence 999999999998764 4579999999999987643210 00111111121111 11245679
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccCCCCccc-HHhHHHHHhhhcccCC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVT-LVSILDYGFVYFTKKP 356 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it-~~el~~~~~~~~~~~p 356 (570)
+|+|++++.++..... .-.++++++.+| ..++ ..++.+.+.+.++..+
T Consensus 228 ~dva~~~~~l~s~~~~-~itG~~~~vdgG--~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 228 EDVANMAMFLLSDAAS-FVTGQVINVDGG--QMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT--GGGSCCCCCHHHHHHHHCTTG
T ss_pred HHHHHHHHHHhCcccC-CCCCCEEEeCCC--hhcccCCcchhccccccCCcc
Confidence 9999999988864332 224889999888 5555 6788888888777654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.5e-18 Score=168.18 Aligned_cols=219 Identities=15% Similarity=0.148 Sum_probs=140.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+||||||+||++++++|+++|++ |+++ .|+... .+.+.+++ +.. ..++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~---V~~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~ 58 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGAN---IVLNGSPASTS---LDATAEEF---------KAA---------GINVV 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECTTCSH---HHHHHHHH---------HHT---------TCCEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCcCHHH---HHHHHHHH---------Hhc---------CCcEE
Confidence 47899999999999999999999999964 5666 344322 11211111 110 25688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 59 ~~~~D~~~-------~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 131 (247)
T 2hq1_A 59 VAKGDVKN-------PEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLK 131 (247)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999995 333344444 79999999997542 2346778999999999988887642
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..+||++||....... .....|
T Consensus 132 ~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 155 (247)
T 2hq1_A 132 QKSGKIINITSIAGIIGN--------------------------------------------------------AGQANY 155 (247)
T ss_dssp HTCEEEEEECC-----------------------------------------------------------------CHHH
T ss_pred cCCcEEEEEcChhhccCC--------------------------------------------------------CCCcHh
Confidence 256899999997543211 123679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..++++.+++|+.|.++.....+ ......+..+. ....+++++
T Consensus 156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ 217 (247)
T 2hq1_A 156 AASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---------DKVKEMYLNNI---------PLKRFGTPE 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHTTS---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---------hHHHHHHHhhC---------CCCCCCCHH
Confidence 99999999988765 34799999999998764321111 11111222211 123578999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... ...+++|+++++
T Consensus 218 dva~~~~~l~~~~~~-~~~G~~~~v~gG 244 (247)
T 2hq1_A 218 EVANVVGFLASDDSN-YITGQVINIDGG 244 (247)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-cccCcEEEeCCC
Confidence 999999887753322 223789999876
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-17 Score=164.05 Aligned_cols=204 Identities=11% Similarity=0.113 Sum_probs=147.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|+++|++ |+++.|+.. . +++.++.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~---V~~~~r~~~-~--------------------------------~~~~~~~ 45 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRRE-G--------------------------------EDLIYVE 45 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCC-S--------------------------------SSSEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE---EEEEccCcc-c--------------------------------cceEEEe
Confidence 689999999999999999999999964 578888653 1 3457899
Q ss_pred ccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------c----CHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 92 GDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------E----RYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~----~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
+|+++ .+..+.+++ .+|+|||+||..... + .++..+++|+.|+.++++++... ..
T Consensus 46 ~D~~~-------~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 118 (242)
T 1uay_A 46 GDVTR-------EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRE 118 (242)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred CCCCC-------HHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99995 333445555 799999999975432 1 56788999999999999998763 11
Q ss_pred --------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 154 --------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 154 --------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
..+||++||...+...
T Consensus 119 ~~~~~~~~~~~iv~~sS~~~~~~~-------------------------------------------------------- 142 (242)
T 1uay_A 119 NPPDAEGQRGVIVNTASVAAFEGQ-------------------------------------------------------- 142 (242)
T ss_dssp CCCCTTSCSEEEEEECCTHHHHCC--------------------------------------------------------
T ss_pred cCCCCCCCCeEEEEeCChhhccCC--------------------------------------------------------
Confidence 1389999998876432
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..|.+++.. ..+++++++||+.|+++.....+ ..+...+..+.. + ..
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~~--~------~~ 205 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---------EKAKASLAAQVP--F------PP 205 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---------HHHHHHHHTTCC--S------SC
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---------hhHHHHHHhhCC--C------cc
Confidence 12467999999999887654 34899999999999886432111 111122222111 0 02
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+++++|+|++++.++.. ....+++|++.++
T Consensus 206 ~~~~~~dva~~~~~l~~~---~~~~G~~~~v~gG 236 (242)
T 1uay_A 206 RLGRPEEYAALVLHILEN---PMLNGEVVRLDGA 236 (242)
T ss_dssp SCCCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred cCCCHHHHHHHHHHHhcC---CCCCCcEEEEcCC
Confidence 467899999999998864 2234789999887
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=164.40 Aligned_cols=218 Identities=13% Similarity=0.159 Sum_probs=146.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
||+|+||||||+||++++++|+++|+. |+++ .|+... .+.+.++ ++.. ..++.++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~---v~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~ 56 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCK---VLVNYARSAKA---AEEVSKQ---------IEAY---------GGQAITF 56 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHHH---HHHHHHH---------HHHH---------TCEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHH---------HHhc---------CCcEEEE
Confidence 689999999999999999999999964 4554 564321 1122111 1111 2468899
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+.+. .+
T Consensus 57 ~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 129 (244)
T 1edo_A 57 GGDVSK-------EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR 129 (244)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence 999995 333345544 699999999976431 346778999999999999988653 25
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..+||++||...+... .....|+.
T Consensus 130 ~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~ 153 (244)
T 1edo_A 130 KGRIINIASVVGLIGN--------------------------------------------------------IGQANYAA 153 (244)
T ss_dssp CEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEECChhhcCCC--------------------------------------------------------CCCccchh
Confidence 6899999998654221 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.. ..+++++++||+.|.++...... .......... . ....+++++|+
T Consensus 154 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~-~--------~~~~~~~~~dv 215 (244)
T 1edo_A 154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG---------EDMEKKILGT-I--------PLGRTGQPENV 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---------HHHHHHHHTS-C--------TTCSCBCHHHH
T ss_pred hHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC---------hHHHHHHhhc-C--------CCCCCCCHHHH
Confidence 999888877654 35899999999999875432110 1111111111 1 11347889999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++.........+++|++.++
T Consensus 216 a~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 216 AGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 99999887432222224789999876
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.5e-18 Score=167.31 Aligned_cols=226 Identities=13% Similarity=0.170 Sum_probs=152.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+. .|+++.|+... ...+.+. +..+ ..++.+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~--~v~~~~r~~~~-~~~~~l~-------------~~~~-------~~~~~~ 59 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLK--NFVILDRVENP-TALAELK-------------AINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCS--EEEEEESSCCH-HHHHHHH-------------HHCT-------TSEEEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCc--EEEEEecCchH-HHHHHHH-------------HhCC-------CceEEE
Confidence 47899999999999999999999999964 35777887542 1122221 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc-c-C----ceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC-V-K----LKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~----lk~ 156 (570)
+.+|++++ .++ .+.++ .++|+|||+||... .+.++..+++|+.|+.++++++... . . -.+
T Consensus 60 ~~~D~~~~-----~~~-~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~ 132 (254)
T 1sby_A 60 HTYDVTVP-----VAE-SKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGI 132 (254)
T ss_dssp EECCTTSC-----HHH-HHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EEEecCCC-----hHH-HHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCE
Confidence 99999953 022 22333 37999999999764 4568889999999999999988653 1 1 357
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+... .....|+.||+
T Consensus 133 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~ 156 (254)
T 1sby_A 133 IANICSVTGFNAI--------------------------------------------------------HQVPVYSASKA 156 (254)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTSHHHHHHHH
T ss_pred EEEECchhhccCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998775321 12357999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..|.+++.. ..++.+++++|+.|.++.......|.+.... +...... ..+.+++++|++
T Consensus 157 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~dvA~~ 220 (254)
T 1sby_A 157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPR----VAELLLS------------HPTQTSEQCGQN 220 (254)
T ss_dssp HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTT----HHHHHTT------------SCCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHH----HHHHHhc------------CCCCCHHHHHHH
Confidence 999988765 2589999999999988643322223211000 1111110 122378999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccCCCCcccH
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~~~~~it~ 341 (570)
++.++.. ...+++|++.++...+++|
T Consensus 221 i~~~~~~----~~~G~~~~v~gG~~~~~~~ 246 (254)
T 1sby_A 221 FVKAIEA----NKNGAIWKLDLGTLEAIEW 246 (254)
T ss_dssp HHHHHHH----CCTTCEEEEETTEEEECCC
T ss_pred HHHHHHc----CCCCCEEEEeCCceeEecc
Confidence 9988752 2237899998873334443
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.4e-17 Score=161.75 Aligned_cols=222 Identities=14% Similarity=0.096 Sum_probs=148.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|++.|+ +|+++.|+.. ...+.+.++ ++.. ..++.+
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~--~~~~~~~~~---------l~~~---------~~~~~~ 61 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKE--DEANSVLEE---------IKKV---------GGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCH--HHHHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEcCCCh--HHHHHHHHH---------HHhc---------CCceEE
Confidence 5789999999999999999999999985 4678888321 111122111 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 134 (261)
T 1gee_A 62 VKGDVTV-------ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC
Confidence 9999995 333334444 799999999976431 346678999999999998887653 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ ..++|++||....... .....|
T Consensus 135 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T 1gee_A 135 DIKGTVINMSSVHEKIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEeCCHHhcCCC--------------------------------------------------------CCccHH
Confidence 2 5799999997654211 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.. ..+++++++||+.|.++.... ..........+.... ....+++++
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~ 222 (261)
T 1gee_A 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE-------KFADPEQRADVESMI---------PMGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHH-------HHHSHHHHHHHHTTC---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhh-------cccChhHHHHHHhcC---------CCCCCcCHH
Confidence 99998888877654 348999999999998864311 000011111111111 113478999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ....++++++.++
T Consensus 223 dva~~~~~l~~~~~-~~~~G~~~~v~gg 249 (261)
T 1gee_A 223 EIAAVAAWLASSEA-SYVTGITLFADGG 249 (261)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCccc-cCCCCcEEEEcCC
Confidence 99999998875332 2224789999887
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=164.59 Aligned_cols=220 Identities=15% Similarity=0.163 Sum_probs=150.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+++||||+|+||++++++|+++|.. |+++.|.... ..+.+.+++ +.. ..++.+
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~---------~~~---------~~~~~~ 58 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYN---VAVNYAGSKE--KAEAVVEEI---------KAK---------GVDSFA 58 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH---------HHT---------TSCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHH---------Hhc---------CCcEEE
Confidence 46799999999999999999999999964 4566664321 112222111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 59 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 131 (246)
T 3osu_A 59 IQANVAD-------ADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ 131 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333345444 78999999997642 1346778999999999999988331 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (246)
T 3osu_A 132 RSGAIINLSSVVGAVGN--------------------------------------------------------PGQANYV 155 (246)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCChHHH
Confidence 55799999997654321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++++..++|+.|.++...... ......+..+. ....+...+|
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~~---------p~~r~~~~~d 217 (246)
T 3osu_A 156 ATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---------DELKEQMLTQI---------PLARFGQDTD 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---------HHHHHHHHTTC---------TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---------HHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999888887654 45899999999999886543221 12222222221 1234567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.++++++.+|
T Consensus 218 va~~v~~l~s~~~~-~itG~~i~vdgG 243 (246)
T 3osu_A 218 IANTVAFLASDKAK-YITGQTIHVNGG 243 (246)
T ss_dssp HHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 99999988764332 234789999886
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-17 Score=165.09 Aligned_cols=211 Identities=15% Similarity=0.167 Sum_probs=147.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+. ++. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 57 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGA---KVVFGDILDEE---GKAMA-------------AEL--------ADAARY 57 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHT--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------hcCceE
Confidence 6789999999999999999999999996 45777786421 11111 111 134788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+.. + .
T Consensus 58 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (260)
T 1nff_A 58 VHLDVTQ-------PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 130 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333345554 799999999975431 34677899999999777666533 1 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (260)
T 1nff_A 131 GRGSIINISSIEGLAGT--------------------------------------------------------VACHGYT 154 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCCEEEEEeehhhcCCC--------------------------------------------------------CCchhHH
Confidence 56899999998775321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..+++++++||+.|.++... +... ... ......++.++|
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~--------------~~~-----~~~~~~~~~~~d 211 (260)
T 1nff_A 155 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----WVPE--------------DIF-----QTALGRAAEPVE 211 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----TSCT--------------TCS-----CCSSSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----cchh--------------hHH-----hCccCCCCCHHH
Confidence 9999999988764 35899999999999886432 1000 000 011234678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ....+++|++.++
T Consensus 212 vA~~v~~l~s~~~-~~~~G~~~~v~gG 237 (260)
T 1nff_A 212 VSNLVVYLASDES-SYSTGAEFVVDGG 237 (260)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCccc-cCCcCCEEEECCC
Confidence 9999998875432 2224789999887
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.77 E-value=4e-18 Score=162.62 Aligned_cols=183 Identities=14% Similarity=0.196 Sum_probs=133.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|||||||||++++++|+ +|+ +|+++.|+.. .+.+
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~---~V~~~~r~~~--------------------------------------~~~~ 41 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKA---EVITAGRHSG--------------------------------------DVTV 41 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTS---EEEEEESSSS--------------------------------------SEEC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCC---eEEEEecCcc--------------------------------------ceee
Confidence 389999999999999999999 885 4577777531 3678
Q ss_pred cCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEEe
Q 008315 93 DISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHVS 161 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~vS 161 (570)
|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++.+. .+-.+||++|
T Consensus 42 D~~~-------~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~s 114 (202)
T 3d7l_A 42 DITN-------IDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTT 114 (202)
T ss_dssp CTTC-------HHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEEC
T ss_pred ecCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEc
Confidence 9984 333445554 489999999965321 234667899999999999998764 1126899999
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|.+.+... .....|+.||+..|.+
T Consensus 115 S~~~~~~~--------------------------------------------------------~~~~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 115 GIMMEDPI--------------------------------------------------------VQGASAAMANGAVTAF 138 (202)
T ss_dssp CGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHHHH
T ss_pred chhhcCCC--------------------------------------------------------CccHHHHHHHHHHHHH
Confidence 98764321 1236799999999999
Q ss_pred HHHhc----CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 242 MQQSK----ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 242 v~~~~----~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
++.+. .+++++++||+.|+++... ... .....++++++|+|++++.++.
T Consensus 139 ~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------------~~~---------~~~~~~~~~~~dva~~~~~~~~ 191 (202)
T 3d7l_A 139 AKSAAIEMPRGIRINTVSPNVLEESWDK------------------LEP---------FFEGFLPVPAAKVARAFEKSVF 191 (202)
T ss_dssp HHHHTTSCSTTCEEEEEEECCBGGGHHH------------------HGG---------GSTTCCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCeEEEEEecCccCCchhh------------------hhh---------hccccCCCCHHHHHHHHHHhhh
Confidence 98763 4899999999999885320 011 1123468999999999888773
Q ss_pred HhcCCCCCCceEEe
Q 008315 318 AHAKQPSDANIYHV 331 (570)
Q Consensus 318 ~~~~~~~~~~iyn~ 331 (570)
. ...+++||+
T Consensus 192 ---~-~~~G~~~~v 201 (202)
T 3d7l_A 192 ---G-AQTGESYQV 201 (202)
T ss_dssp ---S-CCCSCEEEE
T ss_pred ---c-cccCceEec
Confidence 1 223678886
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.7e-17 Score=163.28 Aligned_cols=219 Identities=14% Similarity=0.092 Sum_probs=146.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|+++|+ +|+++.|+... +.+.+++ .+ .+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~----~~~~~~~----------------------~~-~~ 53 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEG----KEVAEAI----------------------GG-AF 53 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTH----HHHHHHH----------------------TC-EE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChhH----HHHHHHh----------------------hC-CE
Confidence 5789999999999999999999999996 46788887543 1111110 13 77
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||..... +.++..+++|+.|+.++++++... .
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 126 (256)
T 2d1y_A 54 FQVDLED-------ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 126 (256)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 8999995 33233443 3689999999976431 346778999999999999987542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 127 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 150 (256)
T 2d1y_A 127 GGGAIVNVASVQGLFAE--------------------------------------------------------QENAAYN 150 (256)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEccccccCCC--------------------------------------------------------CCChhHH
Confidence 56899999998654221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++.+.+++|+.|.++... .+.............+ ........+++++|
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d 218 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL---EAIALSPDPERTRRDW---------EDLHALRRLGKPEE 218 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HHHC--------CHHH---------HTTSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh---hccccccCCHHHHHHH---------HhcCCCCCCcCHHH
Confidence 9999999988764 35899999999998764211 0000000000000001 11112345789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... ...++++++.++
T Consensus 219 vA~~~~~l~s~~~~-~~~G~~~~v~gG 244 (256)
T 2d1y_A 219 VAEAVLFLASEKAS-FITGAILPVDGG 244 (256)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCCCCEEEECCC
Confidence 99999988864322 224789999887
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.6e-17 Score=158.89 Aligned_cols=220 Identities=13% Similarity=0.116 Sum_probs=148.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+++. +.. ..++.++.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~---------~~~--------~~~~~~~~ 58 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD---RVAALDLSAET---LEETARTHW---------HAY--------ADKVLRVR 58 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHS---------TTT--------GGGEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHH---------Hhc--------CCcEEEEE
Confidence 68999999999999999999999985 46788886421 112211110 000 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc----------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD----------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~----------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+...
T Consensus 59 ~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 131 (250)
T 2cfc_A 59 ADVAD-------EGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL 131 (250)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99995 333345544 799999999975421 246777899999998887766432
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 132 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (250)
T 2cfc_A 132 QGAGVIVNIASVASLVAF--------------------------------------------------------PGRSAY 155 (250)
T ss_dssp HTCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEECChhhccCC--------------------------------------------------------CCchhH
Confidence 256899999998765321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.+ ..+++++++||+.|+++.... ... ...+...+..+. ....+...+
T Consensus 156 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~----~~~~~~~~~~~~---------~~~~~~~~~ 219 (250)
T 2cfc_A 156 TTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW---RLD----QPELRDQVLARI---------PQKEIGTAA 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH---HHT----SHHHHHHHHTTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc---ccC----CHHHHHHHHhcC---------CCCCCcCHH
Confidence 99999999988765 348999999999999865321 000 011122222211 122467899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ....++++++.++
T Consensus 220 dva~~~~~l~~~~~-~~~~G~~~~v~gG 246 (250)
T 2cfc_A 220 QVADAVMFLAGEDA-TYVNGAALVMDGA 246 (250)
T ss_dssp HHHHHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHcCchh-hcccCCEEEECCc
Confidence 99999998875322 2224789998776
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=8.3e-18 Score=165.99 Aligned_cols=218 Identities=14% Similarity=0.124 Sum_probs=145.9
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++. ..++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~ 62 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS---KVIISGSNEEK---LKSLG-------------NAL--------KDNY 62 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------CSSE
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-------------HHh--------ccCc
Confidence 346899999999999999999999999995 45788885321 11111 111 2568
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++.+... .+.
T Consensus 63 ~~~~~D~~~-------~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~ 135 (249)
T 3f9i_A 63 TIEVCNLAN-------KEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRY 135 (249)
T ss_dssp EEEECCTTS-------HHHHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEcCCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 889999995 333445554 68999999997542 2567888999999999999887542 245
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+... .....|+.|
T Consensus 136 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 159 (249)
T 3f9i_A 136 GRIINISSIVGIAGN--------------------------------------------------------PGQANYCAS 159 (249)
T ss_dssp EEEEEECCCCC--CC--------------------------------------------------------SCSHHHHHH
T ss_pred cEEEEEccHHhccCC--------------------------------------------------------CCCchhHHH
Confidence 789999998765321 124679999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+++.. ..++.+.+++|+.|.++...... ......+..+ .....+..++|+|
T Consensus 160 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~~~~~~~~~~dva 221 (249)
T 3f9i_A 160 KAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN---------EKQREAIVQK---------IPLGTYGIPEDVA 221 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC---------HHHHHHHHHH---------CTTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC---------HHHHHHHHhc---------CCCCCCcCHHHHH
Confidence 99888887654 45899999999999876432211 0111111111 1223567899999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++..... .-.|+++++.+|
T Consensus 222 ~~~~~l~s~~~~-~~tG~~~~vdgG 245 (249)
T 3f9i_A 222 YAVAFLASNNAS-YITGQTLHVNGG 245 (249)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcCCccC-CccCcEEEECCC
Confidence 999988864432 234889999887
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-16 Score=161.04 Aligned_cols=235 Identities=12% Similarity=0.132 Sum_probs=153.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE------SAALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||++|||||+|+||++++++|++.|. +|+++.|+.... ...+++. +.. +.++. .
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~-~~~-----~~~~~-~-------- 69 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGA---DIAICDRCENSDVVGYPLATADDLA-ETV-----ALVEK-T-------- 69 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTCSSCCCCHHHHH-HHH-----HHHHH-T--------
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC---eEEEEeCCccccccccccccHHHHH-HHH-----HHHHh-c--------
Confidence 5899999999999999999999999996 457888864321 0111221 110 11111 1
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 70 ~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 142 (281)
T 3s55_A 70 GRRCISAKVDVKD-------RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVA 142 (281)
T ss_dssp TCCEEEEECCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2578999999995 333344443 79999999997642 14467789999999999999874
Q ss_pred H-c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 150 K-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 150 ~-~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
. + .+..++|++||...+... .
T Consensus 143 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~ 166 (281)
T 3s55_A 143 PGMIKRNYGRIVTVSSMLGHSAN--------------------------------------------------------F 166 (281)
T ss_dssp HHHHHHTCEEEEEECCGGGGSCC--------------------------------------------------------T
T ss_pred HHHHHcCCCEEEEECChhhcCCC--------------------------------------------------------C
Confidence 4 1 245789999998765321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC---Ccccccc--chHHHHHHHhcCCCceeecCC
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP---GWVEDLK--TINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~---gw~~~~~--~~~~~i~~~~~G~~~~~~~~~ 296 (570)
....|+.||+..+.+.+.. ..++++..++|+.|.++...... .+..... ......... ....
T Consensus 167 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 238 (281)
T 3s55_A 167 AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVF--------ASLH 238 (281)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHH--------HHHC
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHH--------Hhhh
Confidence 2457999999999988765 35899999999999987543200 0000000 000000000 0001
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.....+..++|+|++++.++..... .-.|+++++.+|
T Consensus 239 ~~~~~~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdgG 275 (281)
T 3s55_A 239 LQYAPFLKPEEVTRAVLFLVDEASS-HITGTVLPIDAG 275 (281)
T ss_dssp SSSCSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred ccCcCCCCHHHHHHHHHHHcCCccc-CCCCCEEEECCC
Confidence 1124678999999999988864332 234889999887
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-17 Score=163.23 Aligned_cols=215 Identities=11% Similarity=0.104 Sum_probs=147.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+..... .+.+++ ..++.+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~---~~~~~~---------------------~~~~~~ 62 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSGGE---AQAKKL---------------------GNNCVF 62 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSSHH---HHHHHH---------------------CTTEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCcHhHH---HHHHHh---------------------CCceEE
Confidence 5789999999999999999999999995 4678888764321 111111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------------ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------------DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~ 135 (265)
T 2o23_A 63 APADVTS-------EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 135 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999995 333345554 79999999997532 12367789999999999999887
Q ss_pred Hc-c--------CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccc
Q 008315 150 KC-V--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 150 ~~-~--------~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
.. . +..++|++||...+...
T Consensus 136 ~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------- 164 (265)
T 2o23_A 136 GEMGQNEPDQGGQRGVIINTASVAAFEGQ--------------------------------------------------- 164 (265)
T ss_dssp HHHTTSCCCTTSCCEEEEEECCTHHHHCC---------------------------------------------------
T ss_pred HHHHhcccccCCCCcEEEEeCChhhcCCC---------------------------------------------------
Confidence 64 1 45789999998775321
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecC
Q 008315 221 RAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~ 295 (570)
.....|+.||+..|.+++.. ..++++.+++|+.|.++.....+. . ....+... .+.
T Consensus 165 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~------~~~~~~~~----~~~- 225 (265)
T 2o23_A 165 -----VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE---K------VCNFLASQ----VPF- 225 (265)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHHT----CSS-
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH---H------HHHHHHHc----CCC-
Confidence 12357999999888887654 358999999999997754321110 0 00000110 000
Q ss_pred CCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...++.++|+|++++.++.. ....++++++.++
T Consensus 226 ---~~~~~~~~dva~~~~~l~~~---~~~~G~~i~vdgG 258 (265)
T 2o23_A 226 ---PSRLGDPAEYAHLVQAIIEN---PFLNGEVIRLDGA 258 (265)
T ss_dssp ---SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred ---cCCCCCHHHHHHHHHHHhhc---CccCceEEEECCC
Confidence 02367899999999988752 2234788998876
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-17 Score=162.77 Aligned_cols=227 Identities=12% Similarity=0.143 Sum_probs=151.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+..... +.+. + +.++. ..++.+
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~---~V~~~~r~~~~~~--~~~~-~---------l~~~~--------~~~~~~ 68 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAADAV--EVTE-K---------VGKEF--------GVKTKA 68 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTTHH--HHHH-H---------HHHHH--------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEeCcchhhH--HHHH-H---------HHHhc--------CCeeEE
Confidence 5789999999999999999999999985 5688888654321 1111 1 11111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++...
T Consensus 69 ~~~Dl~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 141 (265)
T 1h5q_A 69 YQCDVSN-------TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 141 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhc
Confidence 9999995 332334433 599999999975431 346677999999999999988653
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+...+||++||...+....+. .... .....|
T Consensus 142 ~~~~~iv~~sS~~~~~~~~~~--~~~~-----------------------------------------------~~~~~Y 172 (265)
T 1h5q_A 142 QQKGSIVVTSSMSSQIINQSS--LNGS-----------------------------------------------LTQVFY 172 (265)
T ss_dssp TCCEEEEEECCGGGTSCCEEE--TTEE-----------------------------------------------CSCHHH
T ss_pred CCCceEEEeCCchhhcccccc--cccc-----------------------------------------------cccccc
Confidence 124789999998765432100 0000 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.. ..+++++++||+.|.++..... . ........... ....+++++
T Consensus 173 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~------~~~~~~~~~~~---------~~~~~~~~~ 234 (265)
T 1h5q_A 173 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---D------KKIRDHQASNI---------PLNRFAQPE 234 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---C------HHHHHHHHHTC---------TTSSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---c------hhHHHHHHhcC---------cccCCCCHH
Confidence 99999999988765 3489999999999988643221 0 11111111111 112467899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... ...+++|++.++
T Consensus 235 dva~~~~~l~~~~~~-~~~G~~~~v~gG 261 (265)
T 1h5q_A 235 EMTGQAILLLSDHAT-YMTGGEYFIDGG 261 (265)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHHHHhhccCchh-cCcCcEEEecCC
Confidence 999999988764322 234789999886
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-17 Score=161.77 Aligned_cols=214 Identities=11% Similarity=0.136 Sum_probs=145.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|. +|+++.|+...... ..++ ...++.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~~---~~~~---------------------~~~~~~~ 57 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGA---TVLGLDLKPPAGEE---PAAE---------------------LGAAVRF 57 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSCC------------------------------------CEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHHHH---HHHH---------------------hCCceEE
Confidence 5899999999999999999999999996 45788887654321 1101 0246789
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+++++...
T Consensus 58 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 130 (257)
T 3tpc_A 58 RNADVTN-------EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEV 130 (257)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999995 333345444 79999999997632 1446778999999999999998753
Q ss_pred -c--------CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 152 -V--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 152 -~--------~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
. +-.++|++||...+...
T Consensus 131 m~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------------- 157 (257)
T 3tpc_A 131 MSQGEPDADGERGVIVNTASIAAFDGQ----------------------------------------------------- 157 (257)
T ss_dssp HTTSCCCTTSCCEEEEEECCTHHHHCC-----------------------------------------------------
T ss_pred HHhccccCCCCCeEEEEEechhhccCC-----------------------------------------------------
Confidence 1 34679999998765321
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCC
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETK 297 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~ 297 (570)
.....|+.||+..+.+.+.. ..++++.+++|+.|.++.....+. ........ ..
T Consensus 158 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---------~~~~~~~~---------~~ 216 (257)
T 3tpc_A 158 ---IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ---------DVQDALAA---------SV 216 (257)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------------C---------CS
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH---------HHHHHHHh---------cC
Confidence 12467999999999887654 358999999999998764322111 00111111 11
Q ss_pred ce-eecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 298 TI-MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 298 ~~-~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.. ..+...+|+|++++.++.. ..-.|+++++.+|
T Consensus 217 p~~~r~~~~~dva~~v~~l~s~---~~itG~~i~vdGG 251 (257)
T 3tpc_A 217 PFPPRLGRAEEYAALVKHICEN---TMLNGEVIRLDGA 251 (257)
T ss_dssp SSSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred CCCCCCCCHHHHHHHHHHHccc---CCcCCcEEEECCC
Confidence 11 3467899999999988863 2334889999887
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-17 Score=162.82 Aligned_cols=221 Identities=16% Similarity=0.129 Sum_probs=149.8
Q ss_pred hcCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+++|+|+||||| |+||++++++|+++|. +|+++.|+... .+.+. + +.++. .+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-~---------l~~~~---------~~ 59 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA---EVALSYQAERL---RPEAE-K---------LAEAL---------GG 59 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC---EEEEEESCGGG---HHHHH-H---------HHHHT---------TC
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-H---------HHHhc---------CC
Confidence 3689999999999 9999999999999996 45788886531 11221 1 11111 23
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a 148 (570)
+.++.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 60 ~~~~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 132 (261)
T 2wyu_A 60 ALLFRADVTQ-------DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (261)
T ss_dssp CEEEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 6889999995 333334443 78999999997542 1346778999999999999999
Q ss_pred HHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
... .+-.++|++||...+... ..
T Consensus 133 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 156 (261)
T 2wyu_A 133 EPLLREGGGIVTLTYYASEKVV--------------------------------------------------------PK 156 (261)
T ss_dssp TTTEEEEEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHhccCCEEEEEecccccCCC--------------------------------------------------------CC
Confidence 764 112589999997654221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+++.. ..++.+.+++|+.|.++.....+. .......+..+. ....+
T Consensus 157 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~---------p~~~~ 220 (261)
T 2wyu_A 157 YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-------FTKMYDRVAQTA---------PLRRN 220 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT-------HHHHHHHHHHHS---------TTSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc-------cHHHHHHHHhcC---------CCCCC
Confidence 357999999999988764 348999999999998865322111 111111111111 01135
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..++|+|++++.++.... ....++++++.++
T Consensus 221 ~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG 251 (261)
T 2wyu_A 221 ITQEEVGNLGLFLLSPLA-SGITGEVVYVDAG 251 (261)
T ss_dssp CCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcChhh-cCCCCCEEEECCC
Confidence 679999999998885332 2234789999887
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=6.5e-17 Score=158.89 Aligned_cols=196 Identities=15% Similarity=0.185 Sum_probs=139.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCc----cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNV----KKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V----~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++|+|+||||||+||++++++|++.|+.. .+|+++.|+.. ..+.+.++ ++.. ..+
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~---~~~~~~~~---------~~~~---------~~~ 59 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAA---DLEKISLE---------CRAE---------GAL 59 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHH---HHHHHHHH---------HHTT---------TCE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHH---HHHHHHHH---------HHcc---------CCe
Confidence 36899999999999999999999998610 05678888532 11222211 1110 246
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++.+...
T Consensus 60 ~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 132 (244)
T 2bd0_A 60 TDTITADISD-------MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALM 132 (244)
T ss_dssp EEEEECCTTS-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eeEEEecCCC-------HHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 8899999995 333344443 699999999976432 346778999999999999988542
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||...+... ....
T Consensus 133 ~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~ 156 (244)
T 2bd0_A 133 ERQHSGHIFFITSVAATKAF--------------------------------------------------------RHSS 156 (244)
T ss_dssp HHHTCEEEEEECCGGGTSCC--------------------------------------------------------TTCH
T ss_pred HhCCCCEEEEEecchhcCCC--------------------------------------------------------CCCc
Confidence 256899999998776421 1246
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..+++++++||+.|.++.....+. . . ...+++
T Consensus 157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~-----------------------~-~~~~~~ 209 (244)
T 2bd0_A 157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---E-----------------------M-QALMMM 209 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---T-----------------------T-GGGSBC
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---c-----------------------c-cccCCC
Confidence 7999999999988543 458999999999998865422110 0 0 125789
Q ss_pred HHHHHHHHHHHHH
Q 008315 305 VDMVVNAMIVAMV 317 (570)
Q Consensus 305 VDdva~aii~a~~ 317 (570)
++|+|++++.++.
T Consensus 210 ~~dva~~~~~l~~ 222 (244)
T 2bd0_A 210 PEDIAAPVVQAYL 222 (244)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998885
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-17 Score=161.79 Aligned_cols=224 Identities=19% Similarity=0.189 Sum_probs=149.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 62 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA---SVYTCSRNQKE---LNDCLTQ---------WRSK---------GFKVEA 62 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 5799999999999999999999999996 45788886421 1111111 1111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 135 (260)
T 2ae2_A 63 SVCDLSS-------RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 135 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 33333444 579999999997542 1346778999999999999988531
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (260)
T 2ae2_A 136 SERGNVVFISSVSGALAV--------------------------------------------------------PYEAVY 159 (260)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------CCcchH
Confidence 256899999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++.+.+++|+.|.++... .+... ......+..+..+ .....++.++
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~ 226 (260)
T 2ae2_A 160 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE---MTIQD-PEQKENLNKLIDR---------CALRRMGEPK 226 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHH---HHTTS-HHHHHHHHHHHHT---------STTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchh---hhccC-hhhHHHHHHHHhc---------CCCCCCCCHH
Confidence 99999999998765 34899999999999765321 00000 0000111111111 1123478999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ....++++++.++
T Consensus 227 dvA~~v~~l~s~~~-~~~tG~~~~vdgG 253 (260)
T 2ae2_A 227 ELAAMVAFLCFPAA-SYVTGQIIYVDGG 253 (260)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHcCccc-cCCCCCEEEECCC
Confidence 99999988875332 2234789999887
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=163.78 Aligned_cols=219 Identities=14% Similarity=0.172 Sum_probs=147.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+ +... ..++.+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~-------------~~~~------~~~~~~ 58 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGA---KVMITGRHSDV---GEKAAK-------------SVGT------PDQIQF 58 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH-------------HHCC------TTTEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH-------------Hhhc------cCceEE
Confidence 5789999999999999999999999986 45788886321 111111 1100 146899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+..+.+.+.. + .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 131 (251)
T 1zk4_A 59 FQHDSSD-------EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 599999999975421 34577899999998888776643 2 1
Q ss_pred Cc-eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+. .+||++||...+... .....|
T Consensus 132 ~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (251)
T 1zk4_A 132 GLGASIINMSSIEGFVGD--------------------------------------------------------PSLGAY 155 (251)
T ss_dssp SSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCEEEEeCCchhccCC--------------------------------------------------------CCCccc
Confidence 44 799999998765422 123579
Q ss_pred HHHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+++.. ..+++++++||+.|.++.....+ . ........ .......+++
T Consensus 156 ~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~-------~--~~~~~~~~--------~~~~~~~~~~ 218 (251)
T 1zk4_A 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP-------G--AEEAMSQR--------TKTPMGHIGE 218 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST-------T--HHHHHTST--------TTCTTSSCBC
T ss_pred hHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC-------c--hhhhHHHh--------hcCCCCCCcC
Confidence 99999999988653 35799999999999886432111 0 00111000 0111234789
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++..... ...++++++.++
T Consensus 219 ~~dva~~~~~l~~~~~~-~~~G~~~~v~gG 247 (251)
T 1zk4_A 219 PNDIAYICVYLASNESK-FATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-cccCcEEEECCC
Confidence 99999999988864322 224789999886
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-17 Score=161.44 Aligned_cols=227 Identities=15% Similarity=0.100 Sum_probs=148.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+.. ....+ ++ ++ . ..++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~-~~~~~----~l---------~~-~--------~~~~~~ 55 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA---NIVLNGFGDP-APALA----EI---------AR-H--------GVKAVH 55 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEECSSCC-HHHHH----HH---------HT-T--------SCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCch-HHHHH----HH---------Hh-c--------CCceEE
Confidence 4789999999999999999999999996 4577888764 11111 11 10 0 246888
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++.+.+.. + .
T Consensus 56 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 128 (255)
T 2q2v_A 56 HPADLSD-------VAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR 128 (255)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333445555 79999999997542 134677899999988887776632 1 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 129 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (255)
T 2q2v_A 129 NWGRIINIASVHGLVGS--------------------------------------------------------TGKAAYV 152 (255)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEcCchhccCC--------------------------------------------------------CCchhHH
Confidence 56899999998765321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccc-hHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKT-INALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~-~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+.. ..+++++++||+.|.++.......-...... .......+. ........+++++
T Consensus 153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~p~~~~~~~~ 224 (255)
T 2q2v_A 153 AAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLL--------AEKQPSLAFVTPE 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHH--------TTTCTTCCCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHH--------hccCCCCCCcCHH
Confidence 9999999988764 3579999999999987532100000000000 000001110 1112233578999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... ...+++|++.++
T Consensus 225 dvA~~~~~l~s~~~~-~~tG~~~~vdgG 251 (255)
T 2q2v_A 225 HLGELVLFLCSEAGS-QVRGAAWNVDGG 251 (255)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCCccC-CCCCCEEEECCC
Confidence 999999988754322 224789999876
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.8e-17 Score=163.08 Aligned_cols=224 Identities=13% Similarity=0.080 Sum_probs=147.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe-cCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR-AADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR-~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
-+++|+|+||||+|+||++++++|++.|+ +|+++.| +.. ..+.+.++ +++.. ..++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~~~--------~~~~ 64 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEG---AAQRLVAE---------LNAAR--------AGSA 64 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH---HHHHHHHH---------HHHHS--------TTCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChH---HHHHHHHH---------HHHhc--------CCce
Confidence 36899999999999999999999999995 4578888 421 11222211 11111 1468
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc------------------cCHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD------------------ERYDVAFGINTLGAI 142 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~------------------~~~~~~~~~Nv~gt~ 142 (570)
.++.+|++++.- ..+..+.+++ .+|+|||+||..... +.++..+++|+.|+.
T Consensus 65 ~~~~~Dl~~~~~---~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 141 (276)
T 1mxh_A 65 VLCKGDLSLSSS---LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141 (276)
T ss_dssp EEEECCCSSSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH
T ss_pred EEEeccCCCccc---cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH
Confidence 899999995310 0022334433 799999999975322 445678999999999
Q ss_pred HHHHHHHHc--cCc------eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHH
Q 008315 143 HLVNFAKKC--VKL------KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFM 214 (570)
Q Consensus 143 ~ll~~a~~~--~~l------k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (570)
++++++... .+. .++|++||...+...
T Consensus 142 ~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------- 176 (276)
T 1mxh_A 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL--------------------------------------------- 176 (276)
T ss_dssp HHHHHHHHTC-------CCCEEEEEECCGGGGSCC---------------------------------------------
T ss_pred HHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC---------------------------------------------
Confidence 999998763 233 789999998765321
Q ss_pred hhccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC
Q 008315 215 KNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL 289 (570)
Q Consensus 215 ~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~ 289 (570)
.....|+.||+..|.+.+.. ..++.+.+++|+.|.++ . .+. ......+....
T Consensus 177 -----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~----~~~------~~~~~~~~~~~- 233 (276)
T 1mxh_A 177 -----------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P----AMP------QETQEEYRRKV- 233 (276)
T ss_dssp -----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S----SSC------HHHHHHHHTTC-
T ss_pred -----------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c----cCC------HHHHHHHHhcC-
Confidence 12357999999999988764 34899999999999887 2 111 11112222111
Q ss_pred ceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 290 PCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 290 ~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+. ..++..++|+|++++.++.... ..-.++++++.++
T Consensus 234 ---p~----~r~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG 270 (276)
T 1mxh_A 234 ---PL----GQSEASAAQIADAIAFLVSKDA-GYITGTTLKVDGG 270 (276)
T ss_dssp ---TT----TSCCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred ---CC----CCCCCCHHHHHHHHHHHhCccc-cCccCcEEEECCc
Confidence 10 1126889999999998886332 2224789999876
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.8e-17 Score=160.92 Aligned_cols=220 Identities=12% Similarity=0.130 Sum_probs=151.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|+++|.. |+++.|+... .+.+.+++ ++. ..++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 65 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGAS---VVVTDLKSEG---AEAVAAAI---------RQA---------GGKAIG 65 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCE---EEEEESSHHH---HHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 68999999999999999999999999964 5777775422 12222111 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc---c---cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF---D---ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+++ .+|++||+||.... + +.++..+++|+.|+.++++++... .+
T Consensus 66 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 138 (256)
T 3gaf_A 66 LECNVTD-------EQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG 138 (256)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 333344443 79999999997543 1 346778999999999999988542 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+... .....|+.
T Consensus 139 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 162 (256)
T 3gaf_A 139 GGAILNISSMAGENTN--------------------------------------------------------VRMASYGS 162 (256)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEEcCHHHcCCC--------------------------------------------------------CCchHHHH
Confidence 5799999998765321 12467999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.. ..++.+..++|+.|.++.... + . .......+... .....+..++|+
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~----~-~~~~~~~~~~~---------~p~~r~~~~~dv 225 (256)
T 3gaf_A 163 SKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT---V----L-TPEIERAMLKH---------TPLGRLGEAQDI 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH---H----C-CHHHHHHHHTT---------CTTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh---c----c-CHHHHHHHHhc---------CCCCCCCCHHHH
Confidence 999999988764 357999999999987753210 0 0 01112222221 122356789999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++..... --.|+++++.+|
T Consensus 226 a~~~~~L~s~~~~-~itG~~i~vdgG 250 (256)
T 3gaf_A 226 ANAALFLCSPAAA-WISGQVLTVSGG 250 (256)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHcCCccc-CccCCEEEECCC
Confidence 9999988864322 234889999988
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-16 Score=160.85 Aligned_cols=231 Identities=14% Similarity=0.115 Sum_probs=151.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC----------cccHHHHHHHHHhhhhhHHHHHhhhcccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD----------TESAALRFQNEVLAKDLFNVLKEKWGTRL 79 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~----------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~ 79 (570)
++||+|+||||+|+||++++++|++.|. +|+++.|... .....+.+.+++ +. .
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~---- 75 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA---DIIACDICAPVSASVTYAPASPEDLDETARLV---------ED-Q---- 75 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHH---------HT-T----
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeccccccccccccccCHHHHHHHHHHH---------Hh-c----
Confidence 6899999999999999999999999996 4577777421 122222222111 11 1
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHH
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLV 145 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll 145 (570)
..++.++.+|+++ ++..+.+++ .+|++||+||..... +.++..+++|+.|+.+++
T Consensus 76 ----~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~ 144 (280)
T 3pgx_A 76 ----GRKALTRVLDVRD-------DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTL 144 (280)
T ss_dssp ----TCCEEEEECCTTC-------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred ----CCeEEEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence 2578899999995 333344443 799999999986532 346778999999999999
Q ss_pred HHHHHc----cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccc
Q 008315 146 NFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 146 ~~a~~~----~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
+++... +.-.++|++||...+...
T Consensus 145 ~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------- 172 (280)
T 3pgx_A 145 RATVPAMIEAGNGGSIVVVSSSAGLKAT---------------------------------------------------- 172 (280)
T ss_dssp HHHHHHHHHHCSCEEEEEECCGGGTSCC----------------------------------------------------
T ss_pred HHHHHHHHhcCCCCEEEEEcchhhccCC----------------------------------------------------
Confidence 988542 124689999998765321
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCC
Q 008315 222 AKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
.....|+.||+..+.+.+.. ..++++..++|+.|.++..++ ......+.... .....+....
T Consensus 173 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~-~~~~~~~~~~ 239 (280)
T 3pgx_A 173 ----PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP--------EAMMEIFARHP-SFVHSFPPMP 239 (280)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH--------HHHHHHHHHCG-GGGGGSCCBT
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch--------hhhhhhhhcCc-hhhhhhhhcc
Confidence 12457999999999988764 358999999999998864321 00001110000 0000110111
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.....++.++|+|++++.++..... --.|+++++.+|
T Consensus 240 ~~~~r~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 276 (280)
T 3pgx_A 240 VQPNGFMTADEVADVVAWLAGDGSG-TLTGTQIPVDKG 276 (280)
T ss_dssp TBCSSCBCHHHHHHHHHHHHSGGGT-TCSSCEEEESTT
T ss_pred cCCCCCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 1112478999999999988864332 234789999876
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-17 Score=162.78 Aligned_cols=233 Identities=13% Similarity=0.109 Sum_probs=148.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+||||||+|+||++++++|++.|. +|+++.|+... ..+.+.+++ .+. ...++.+
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~---~V~~~~r~~~~--~~~~~~~~~---------~~~--------~~~~~~~ 80 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA---NIVLNGFGAPD--EIRTVTDEV---------AGL--------SSGTVLH 80 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEECCCCHH--HHHHHHHHH---------HTT--------CSSCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCChH--HHHHHHHHH---------hhc--------cCCcEEE
Confidence 5789999999999999999999999996 45677774321 112222111 111 1257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .
T Consensus 81 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 153 (281)
T 3v2h_A 81 HPADMTK-------PSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK 153 (281)
T ss_dssp ECCCTTC-------HHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344443 789999999985432 346778999999999999987432 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 154 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 177 (281)
T 3v2h_A 154 GWGRIINIASAHGLVAS--------------------------------------------------------PFKSAYV 177 (281)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECCcccccCC--------------------------------------------------------CCchHHH
Confidence 45789999998765321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++..++|+.|.++.............+ .. ..........+......++.++|
T Consensus 178 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~p~~r~~~~ed 251 (281)
T 3v2h_A 178 AAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRG---IT---EEQVINEVMLKGQPTKKFITVEQ 251 (281)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcC---CC---HHHHHHHHHHhcCCCCCccCHHH
Confidence 9999999988754 4589999999999988654211100000000 00 00000111223344567899999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 252 vA~~v~~L~s~~a~-~itG~~i~vdGG 277 (281)
T 3v2h_A 252 VASLALYLAGDDAA-QITGTHVSMDGG 277 (281)
T ss_dssp HHHHHHHHHSSGGG-GCCSCEEEESTT
T ss_pred HHHHHHHHcCCCcC-CCCCcEEEECCC
Confidence 99999988853322 224789999876
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=160.77 Aligned_cols=216 Identities=14% Similarity=0.143 Sum_probs=141.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE-
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF- 89 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~- 89 (570)
+|+|+||||||+||++++++|++.|+. |+++ .|+... .+.+.++ ++.. ..++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~---v~~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~ 56 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFA---LAIHYGQNREK---AEEVAEE---------ARRR---------GSPLVAV 56 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESSCHHH---HHHHHHH---------HHHT---------TCSCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH---HHHHHHH---------HHhc---------CCceEEE
Confidence 479999999999999999999999864 4565 564321 1122111 1111 134566
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHH----HHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++.+ ++.
T Consensus 57 ~~~D~~~-------~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~ 129 (245)
T 2ph3_A 57 LGANLLE-------AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA 129 (245)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EeccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc
Confidence 8999995 33333443 479999999997642 1346678999999966665544 333
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..+||++||...+... .....|
T Consensus 130 -~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y 152 (245)
T 2ph3_A 130 -RFGRIVNITSVVGILGN--------------------------------------------------------PGQANY 152 (245)
T ss_dssp -TCEEEEEECCTHHHHCC--------------------------------------------------------SSBHHH
T ss_pred -CCCEEEEEeChhhccCC--------------------------------------------------------CCCcch
Confidence 56899999997654221 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.. ..+++++++||+.|.++.....+ ......+..+. ....+++++
T Consensus 153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~ 214 (245)
T 2ph3_A 153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---------QEVKEAYLKQI---------PAGRFGRPE 214 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---------HHHHHHHHHTC---------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---------HHHHHHHHhcC---------CCCCCcCHH
Confidence 99999888887654 34899999999999876432111 11111121111 113578999
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ....+++|++.++
T Consensus 215 dva~~~~~l~~~~~-~~~~G~~~~v~gg 241 (245)
T 2ph3_A 215 EVAEAVAFLVSEKA-GYITGQTLCVDGG 241 (245)
T ss_dssp HHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCccc-ccccCCEEEECCC
Confidence 99999998875432 2224789999876
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-17 Score=160.81 Aligned_cols=219 Identities=14% Similarity=0.158 Sum_probs=150.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|. +|+++.|+... .+.+.+++ ++. ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~---~v~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 58 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA---TVVGTATSQAS---AEKFENSM---------KEK---------GFKARG 58 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCceEE
Confidence 4789999999999999999999999995 45778886422 12222111 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 131 (247)
T 3lyl_A 59 LVLNISD-------IESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK 131 (247)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 58999999998643 1346778999999999999987552 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (247)
T 3lyl_A 132 RWGRIISIGSVVGSAGN--------------------------------------------------------PGQTNYC 155 (247)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------CCcHHHH
Confidence 44689999998765321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++++.+++|+.|.++.....+. ........ ......+.+++|
T Consensus 156 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~---------~~~~~~~~~~~d 217 (247)
T 3lyl_A 156 AAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---------EQKSFIAT---------KIPSGQIGEPKD 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---------HHHHHHHT---------TSTTCCCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---------HHHHHHhh---------cCCCCCCcCHHH
Confidence 9999887777654 458999999999998765432211 11111111 112345789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 218 va~~i~~l~s~~~~-~~tG~~i~vdgG 243 (247)
T 3lyl_A 218 IAAAVAFLASEEAK-YITGQTLHVNGG 243 (247)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCCCcC-CccCCEEEECCC
Confidence 99999988754332 234889999887
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=165.57 Aligned_cols=222 Identities=15% Similarity=0.146 Sum_probs=149.4
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+.++ ++.. ..++.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~ 66 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA---HVVVSSRKQEN---VDRTVAT---------LQGE---------GLSVT 66 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCceE
Confidence 36899999999999999999999999996 45788886421 1111111 1111 14688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
.+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 67 ~~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 139 (260)
T 2zat_A 67 GTVCHVGK-------AEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEME 139 (260)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 89999995 332334443 79999999997531 1346778999999999999887531
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||...+... .....
T Consensus 140 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 163 (260)
T 2zat_A 140 KRGGGSVLIVSSVGAYHPF--------------------------------------------------------PNLGP 163 (260)
T ss_dssp HTTCEEEEEECCGGGTSCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEEechhhcCCC--------------------------------------------------------CCchh
Confidence 256899999998776421 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+.+.. ..++++.+++|+.|.++.... .|.+. ........+ .....++++
T Consensus 164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~-----~~~~~~~~~---------~~~~~~~~~ 227 (260)
T 2zat_A 164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV--LWMDK-----ARKEYMKES---------LRIRRLGNP 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH--HHSSH-----HHHHHHHHH---------HTCSSCBCG
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh--cccCh-----HHHHHHHhc---------CCCCCCCCH
Confidence 999999999988765 348999999999998754210 01110 000001100 011246789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|+++..++..... --.++++++.+|
T Consensus 228 ~dva~~v~~l~s~~~~-~~tG~~~~vdgG 255 (260)
T 2zat_A 228 EDCAGIVSFLCSEDAS-YITGETVVVGGG 255 (260)
T ss_dssp GGGHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCcccC-CccCCEEEECCC
Confidence 9999999888753322 224789999987
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-16 Score=158.54 Aligned_cols=218 Identities=16% Similarity=0.146 Sum_probs=152.5
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||+|+||++++++|+++|. +|+++.|+..... ...++ . ..++.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~~---~~~~~-------------~--------~~~~~ 60 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA---RVVLADLPETDLA---GAAAS-------------V--------GRGAV 60 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSCHH---HHHHH-------------H--------CTTCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEcCCHHHHH---HHHHH-------------h--------CCCeE
Confidence 46899999999999999999999999996 4578888764422 11111 1 25678
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc---------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF---------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f---------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 61 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 133 (271)
T 3tzq_B 61 HHVVDLTN-------EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRL 133 (271)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 89999995 333345544 79999999997632 1346778999999999999988321
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||...+... ....
T Consensus 134 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 157 (271)
T 3tzq_B 134 ISAGGGAIVNISSATAHAAY--------------------------------------------------------DMST 157 (271)
T ss_dssp HHTTCEEEEEECCGGGTSBC--------------------------------------------------------SSCH
T ss_pred HhcCCCEEEEECCHHHcCCC--------------------------------------------------------CCCh
Confidence 256799999998765321 1246
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..++.+.+++|+.|.++..+. .+ .......+.... ....+..
T Consensus 158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~------~~~~~~~~~~~~---------~~~r~~~ 220 (271)
T 3tzq_B 158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV--GL------PQPIVDIFATHH---------LAGRIGE 220 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTTS---------TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc--cC------CHHHHHHHHhcC---------CCCCCcC
Confidence 7999999999988765 358999999999998865421 11 112222222211 1123567
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++..... --.|+++++.+|
T Consensus 221 p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 249 (271)
T 3tzq_B 221 PHEIAELVCFLASDRAA-FITGQVIAADSG 249 (271)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCcccC-CcCCCEEEECCC
Confidence 89999999988864432 234889999876
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-17 Score=164.43 Aligned_cols=225 Identities=13% Similarity=0.087 Sum_probs=149.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ ...++.+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~--------~~~~~~~ 62 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGA---TVAIADLDVMA---AQAVV-------------AG--------LENGGFA 62 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HT--------CTTCCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH--------HhcCCeE
Confidence 5789999999999999999999999996 45777875321 11111 11 1136788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++... .
T Consensus 63 ~~~D~~d-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 135 (263)
T 3ak4_A 63 VEVDVTK-------RASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAS 135 (263)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333345554 799999999975431 346778999999999999988653 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ ..++|++||...+... .....|
T Consensus 136 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (263)
T 3ak4_A 136 NTKGVIVNTASLAAKVGA--------------------------------------------------------PLLAHY 159 (263)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCeEEEEecccccccCC--------------------------------------------------------CCchhH
Confidence 3 5799999998764321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcc--ccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWV--EDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~--~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+.+.. ..+++++++||+.|.++.......+. ..-.........+..+ .....++.
T Consensus 160 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~ 230 (263)
T 3ak4_A 160 SASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---------TPLGRIEE 230 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT---------CTTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc---------CCCCCCcC
Confidence 99999999888764 35899999999999875321100000 0000001111111111 11235789
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++..... ...+++|++.++
T Consensus 231 ~~dvA~~v~~l~s~~~~-~~tG~~~~vdgG 259 (263)
T 3ak4_A 231 PEDVADVVVFLASDAAR-FMTGQGINVTGG 259 (263)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHHhCcccc-CCCCCEEEECcC
Confidence 99999999988864322 224789999887
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-16 Score=159.52 Aligned_cols=239 Identities=14% Similarity=0.150 Sum_probs=154.4
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES------AALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
-++||+||||||+|+||++++++|++.|.. |+++.|+..... ..+++. +.. +.++. .
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~-~~~-----~~~~~-~------- 72 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGAD---IIAVDLCDQIASVPYPLATPEELA-ATV-----KLVED-I------- 72 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCSSCCCCHHHHH-HHH-----HHHHH-H-------
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEecccccccccccccchHHHH-HHH-----HHHHh-c-------
Confidence 468999999999999999999999999964 567777632100 011221 110 01111 1
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
..++.++.+|+++ ++..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 73 -~~~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 144 (278)
T 3sx2_A 73 -GSRIVARQADVRD-------RESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTL 144 (278)
T ss_dssp -TCCEEEEECCTTC-------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred -CCeEEEEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2578999999995 333345544 799999999986543 456788999999999999987552
Q ss_pred ---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 ---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+.-.++|++||........ . + .+ ..
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~~-----~------~-~~----------------------------------------~~ 172 (278)
T 3sx2_A 145 VKQGTGGSIVLISSSAGLAGVG-----S------A-DP----------------------------------------GS 172 (278)
T ss_dssp HHHCSCEEEEEECCGGGTSCCC-----C------S-SH----------------------------------------HH
T ss_pred HhCCCCcEEEEEccHHhcCCCc-----c------C-CC----------------------------------------Cc
Confidence 1246899999987653221 0 0 00 12
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHH-hcCCCceeecCCCceeec
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVAS-AQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~-~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..+.+.+.. ..++.+..++|+.|.++..... .....+... .........++... ..+
T Consensus 173 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p-~~~ 243 (278)
T 3sx2_A 173 VGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--------FTREWLAKMAAATDTPGAMGNAMP-VEV 243 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--------HHHHHHHHHHHHCC--CTTSCSSS-CSS
T ss_pred hHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--------hHHHHHhhccchhhhhhhhhhhcC-cCc
Confidence 46999999999988764 4579999999999988643210 000111111 11111111122222 578
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+.++|+|++++.++..... --.|+++++.+|
T Consensus 244 ~~p~dvA~~v~~l~s~~~~-~itG~~i~vdGG 274 (278)
T 3sx2_A 244 LAPEDVANAVAWLVSDQAR-YITGVTLPVDAG 274 (278)
T ss_dssp BCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCcccc-cccCCEEeECCC
Confidence 8999999999988764332 234789999887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-17 Score=161.29 Aligned_cols=217 Identities=19% Similarity=0.196 Sum_probs=125.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|+ +|+++.|+... .+.+.+++ ++. ..++.+
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 62 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA---AVVVADINAEA---AEAVAKQI---------VAD---------GGTAIS 62 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 5799999999999999999999999996 45777775322 12222111 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC---c-------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK---F-------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~---f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||... . .+.++..+++|+.|+.++.+.+...
T Consensus 63 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 135 (253)
T 3qiv_A 63 VAVDVSD-------PESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKM 135 (253)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 9999995 333345444 7999999999732 1 1346778999999977776665331
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||...+. ...
T Consensus 136 ~~~~~g~iv~isS~~~~~-----------------------------------------------------------~~~ 156 (253)
T 3qiv_A 136 TKRGGGAIVNQSSTAAWL-----------------------------------------------------------YSN 156 (253)
T ss_dssp HHHTCEEEEEECC-------------------------------------------------------------------
T ss_pred HhcCCCEEEEECCccccC-----------------------------------------------------------CCc
Confidence 1457899999987651 124
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.+ ..++.+.+++|+.|.++...... ...+...+..+ .....+..
T Consensus 157 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~---------~~~~~~~~ 219 (253)
T 3qiv_A 157 YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--------PKEMVDDIVKG---------LPLSRMGT 219 (253)
T ss_dssp ---CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--------cHHHHHHHhcc---------CCCCCCCC
Confidence 6999999998887754 34799999999999886442110 00111111111 12234456
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++..... .-.+++|++.+|
T Consensus 220 ~~dva~~~~~l~s~~~~-~~tG~~~~vdgG 248 (253)
T 3qiv_A 220 PDDLVGMCLFLLSDEAS-WITGQIFNVDGG 248 (253)
T ss_dssp CCHHHHHHHHHHSGGGT-TCCSCEEEC---
T ss_pred HHHHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 78999999988764322 224889999887
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.8e-17 Score=161.17 Aligned_cols=230 Identities=11% Similarity=0.082 Sum_probs=147.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+.++ ++...+ ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~-------~~~~~~ 62 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA---RLLLFSRNREK---LEAAASR---------IASLVS-------GAQVDI 62 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHST-------TCCEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhcCC-------CCeEEE
Confidence 5789999999999999999999999996 46788886421 1111111 111100 126889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+... .+
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 135 (260)
T 2z1n_A 63 VAGDIRE-------PGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG 135 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 333345544 499999999975321 346778999999998877766431 25
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 136 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 159 (260)
T 2z1n_A 136 WGRMVYIGSVTLLRPW--------------------------------------------------------QDLALSNI 159 (260)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECchhhcCCC--------------------------------------------------------CCCchhHH
Confidence 6899999998776421 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-CccccccchHHH-HHHHhcCCCceeecCCCceeecchHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVEDLKTINAL-FVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~~~~~~~~-i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
||+..+.+.+.. ..+++++++||+.|.++...... ............ ...+. .......+...+
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~~~ 230 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA---------SRIPMGRVGKPE 230 (260)
T ss_dssp HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------------CCTTSSCCCHH
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH---------hcCCCCCccCHH
Confidence 999999887654 34899999999999886532100 000000000000 00000 001112467899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... .-.++++++.++
T Consensus 231 dva~~v~~l~s~~~~-~~tG~~i~vdGG 257 (260)
T 2z1n_A 231 ELASVVAFLASEKAS-FITGAVIPVDGG 257 (260)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 999999988764322 234788998776
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.7e-17 Score=160.58 Aligned_cols=228 Identities=15% Similarity=0.068 Sum_probs=154.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|+++|. +|+++.|+... .+.+.++ +++. + ..++.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~-~-------~~~~~~ 64 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA---NVAVAGRSTAD---IDACVAD---------LDQL-G-------SGKVIG 64 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTT-S-------SSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhh-C-------CCcEEE
Confidence 5899999999999999999999999996 45777876422 1111111 1111 0 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .
T Consensus 65 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 137 (262)
T 3pk0_A 65 VQTDVSD-------RAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS 137 (262)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333344443 799999999975421 346778999999999999988653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... . .....|+
T Consensus 138 ~~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~ 162 (262)
T 3pk0_A 138 GSGRVVLTSSITGPITG--------Y-----------------------------------------------PGWSHYG 162 (262)
T ss_dssp SSCEEEEECCSBTTTBC--------C-----------------------------------------------TTCHHHH
T ss_pred CCcEEEEEechhhccCC--------C-----------------------------------------------CCChhhH
Confidence 55799999997643110 0 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++++..++|+.|.++..... .......+..... ...+...+|
T Consensus 163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~p---------~~r~~~p~d 224 (262)
T 3pk0_A 163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---------GEEYIASMARSIP---------AGALGTPED 224 (262)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---------CHHHHHHHHTTST---------TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---------CHHHHHHHHhcCC---------CCCCcCHHH
Confidence 9999999988765 3589999999999987532110 1122222222211 123567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccCCCCcccH
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTL 341 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~ 341 (570)
+|++++.++..... --.|+++++.+|..-+-++
T Consensus 225 va~~v~~L~s~~~~-~itG~~i~vdGG~~~~~~~ 257 (262)
T 3pk0_A 225 IGHLAAFLATKEAG-YITGQAIAVDGGQVLPESL 257 (262)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTTTTCCSSG
T ss_pred HHHHHHHHhCcccc-CCcCCEEEECCCeecCcch
Confidence 99999988864332 2348899998874333333
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=6.9e-17 Score=160.77 Aligned_cols=220 Identities=13% Similarity=0.136 Sum_probs=147.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||+|+||++++++|++.|+. |+++.|.... ..+.+. +..+ + ...++.++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~~~-~~~~---------~--------~~~~~~~~ 62 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYS---VTVTYHSDTT--AMETMK-ETYK---------D--------VEERLQFV 62 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHH-HHTG---------G--------GGGGEEEE
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCE---EEEEcCCChH--HHHHHH-HHHH---------h--------cCCceEEE
Confidence 5799999999999999999999999964 4666675432 122222 1111 1 12578999
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC-----c----ccCHHHHHHHHHHHHHHHHHHHH----H
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK-----F----DERYDVAFGINTLGAIHLVNFAK----K 150 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~----~ 150 (570)
.+|+++ .+..+.+++ .+|+|||+||... + .+.++..+++|+.|+.++++++. +
T Consensus 63 ~~Dl~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 135 (264)
T 3i4f_A 63 QADVTK-------KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK 135 (264)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 999995 333345444 7999999999421 1 13467789999999999999883 3
Q ss_pred ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 151 ~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
. +..++|++||..+.+... + .....
T Consensus 136 ~-~~g~iv~iss~~~~~~~~-------~-----------------------------------------------~~~~~ 160 (264)
T 3i4f_A 136 Q-NFGRIINYGFQGADSAPG-------W-----------------------------------------------IYRSA 160 (264)
T ss_dssp H-TCEEEEEECCTTGGGCCC-------C-----------------------------------------------TTCHH
T ss_pred c-CCCeEEEEeechhcccCC-------C-----------------------------------------------CCCch
Confidence 3 567899999875542211 0 12468
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.. ..++++.+++|+.|.++...... ...... . ........+..+
T Consensus 161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~----~-----~~~~p~~r~~~~ 222 (264)
T 3i4f_A 161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI---------QEARQL----K-----EHNTPIGRSGTG 222 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH---------HHHHHC-----------------CCCCH
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc---------HHHHHH----H-----hhcCCCCCCcCH
Confidence 999999999988754 35899999999999886543211 011100 0 111122346789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... .-.|+++++.+|
T Consensus 223 ~dva~~v~~l~s~~~~-~itG~~i~vdGG 250 (264)
T 3i4f_A 223 EDIARTISFLCEDDSD-MITGTIIEVTGA 250 (264)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESCS
T ss_pred HHHHHHHHHHcCcccC-CCCCcEEEEcCc
Confidence 9999999988864332 234899999887
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=5e-17 Score=166.98 Aligned_cols=239 Identities=13% Similarity=0.137 Sum_probs=159.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-------CcccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-------DTESAALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-------~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+. ......+.+.+++ ...
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~~-------- 84 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA---RVVVNDIGVGLDGSPASGGSAAQSVVDEI---------TAA-------- 84 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECCCBCTTSSBTCTTSHHHHHHHHH---------HHT--------
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCcccccccccccHHHHHHHHHHH---------Hhc--------
Confidence 6899999999999999999999999996 456777751 1122222322222 111
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHH
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a 148 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++
T Consensus 85 -~~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~ 156 (322)
T 3qlj_A 85 -GGEAVADGSNVAD-------WDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHA 156 (322)
T ss_dssp -TCEEEEECCCTTS-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 2568899999995 333344444 799999999986431 346778999999999999988
Q ss_pred HHc-cC--------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccc
Q 008315 149 KKC-VK--------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 149 ~~~-~~--------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
... .. -.++|++||.......
T Consensus 157 ~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------------------------- 186 (322)
T 3qlj_A 157 AAYWRGLSKAGKAVDGRIINTSSGAGLQGS-------------------------------------------------- 186 (322)
T ss_dssp HHHHHHHHHTTCCCCEEEEEECCHHHHHCB--------------------------------------------------
T ss_pred HHHHHHccccCCCCCcEEEEEcCHHHccCC--------------------------------------------------
Confidence 543 10 1489999997665321
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeec
Q 008315 220 ERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVG 294 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~ 294 (570)
.....|+.||+..+.+++.. ..++.+..|+|+ +..+..+. +... ...
T Consensus 187 ------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~---~~~~------------------~~~ 238 (322)
T 3qlj_A 187 ------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET---VFAE------------------MMA 238 (322)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC---SCCC---------------------
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh---hhhh------------------hhh
Confidence 12357999999999988764 358999999999 54432211 1111 000
Q ss_pred CCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCC---------------cccHHhHHHHHhhhcccC
Q 008315 295 ETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRN---------------PVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 295 ~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~---------------~it~~el~~~~~~~~~~~ 355 (570)
.+.....++.++|+|++++.++..... .-.|+++++.+|... ..+..|+++.+.+.++..
T Consensus 239 ~~~~~~~~~~pedva~~v~~L~s~~~~-~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 239 TQDQDFDAMAPENVSPLVVWLGSAEAR-DVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp -----CCTTCGGGTHHHHHHHTSGGGG-GCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred ccccccCCCCHHHHHHHHHHHhCcccc-CCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 111223456789999999988754332 224788998877211 236699999999888754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-17 Score=159.78 Aligned_cols=215 Identities=12% Similarity=0.064 Sum_probs=145.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 55 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLDEE---GAATA-------------REL--------GDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HTT--------GGGEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------CCceeE
Confidence 5789999999999999999999999996 45777775321 11111 111 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHH----HHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFA----KKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a----~~~ 151 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+..+.+.+ ++.
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 128 (254)
T 1hdc_A 56 QHLDVTI-------EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344444 79999999997543 1346778999999998666554 333
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+..++|++||...+... .....|
T Consensus 129 -~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 151 (254)
T 1hdc_A 129 -GGGSIVNISSAAGLMGL--------------------------------------------------------ALTSSY 151 (254)
T ss_dssp -TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred -CCCEEEEECchhhccCC--------------------------------------------------------CCchhH
Confidence 56899999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc-hH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI-PV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V-pV 305 (570)
+.||+..|.+.+.. ..++.+.++||+.|.++.....+ ......+. .......+. +.
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-----------------~~~~~~~~-~~~p~~~~~~~~ 213 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG-----------------IRQGEGNY-PNTPMGRVGNEP 213 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHT-----------------CCCSTTSC-TTSTTSSCB-CH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccc-----------------hhHHHHHH-hcCCCCCCCCCH
Confidence 99999999988764 45899999999999875321000 00000000 001112356 89
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... ...++++++.++
T Consensus 214 ~dvA~~v~~l~s~~~~-~~tG~~~~vdgG 241 (254)
T 1hdc_A 214 GEIAGAVVKLLSDTSS-YVTGAELAVDGG 241 (254)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CCCCCEEEECCC
Confidence 9999999988864322 234789999877
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-17 Score=163.69 Aligned_cols=225 Identities=15% Similarity=0.103 Sum_probs=149.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 75 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGL---RVFVCARGEEG---LRTTLKE---------LREA---------GVEADG 75 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 5789999999999999999999999995 45788886421 1111111 1111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++...
T Consensus 76 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~ 148 (277)
T 2rhc_B 76 RTCDVRS-------VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGML 148 (277)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHh
Confidence 9999995 333334443 699999999975421 346778999999999999988653
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||....... .....
T Consensus 149 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 172 (277)
T 2rhc_B 149 ERGTGRIVNIASTGGKQGV--------------------------------------------------------VHAAP 172 (277)
T ss_dssp HHTEEEEEEECCGGGTSCC--------------------------------------------------------TTCHH
T ss_pred hcCCeEEEEECccccccCC--------------------------------------------------------CCCcc
Confidence 245799999998654221 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccc-----hHHHHHHHhcCCCceeecCCCcee
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKT-----INALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~-----~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..|.+.+.. ..++++++++|+.|.++.... ....... .......+..+ ....
T Consensus 173 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~p~~ 240 (277)
T 2rhc_B 173 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS---VREHYSDIWEVSTEEAFDRITAR---------VPIG 240 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH---HHHHHHHHHTCCHHHHHHHHHHH---------STTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh---hhhhcccccccchHHHHHHHHhc---------CCCC
Confidence 999999999988764 347999999999998753210 0000000 00111111111 1123
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++.++|+|++++.++..... ...++++++.++
T Consensus 241 r~~~~~dvA~~v~~l~s~~~~-~~tG~~~~vdGG 273 (277)
T 2rhc_B 241 RYVQPSEVAEMVAYLIGPGAA-AVTAQALNVCGG 273 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhc-CCCCcEEEECCC
Confidence 478999999999988764322 234789999876
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-17 Score=161.93 Aligned_cols=220 Identities=17% Similarity=0.178 Sum_probs=142.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|+++|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 59 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA---KVVIVDRDKAG---AERVA-------------GEI--------GDAALA 59 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEcCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 5789999999999999999999999995 46788886422 11111 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHcc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKCV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~~-- 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++.+...-
T Consensus 60 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 132 (261)
T 3n74_A 60 VAADISK-------EADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKE 132 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 333344444 68999999997542 13466789999999999988875431
Q ss_pred -----CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 153 -----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 153 -----~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
+-.++|++||...+... ..
T Consensus 133 ~~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~ 156 (261)
T 3n74_A 133 NGAKGQECVILNVASTGAGRPR--------------------------------------------------------PN 156 (261)
T ss_dssp HHHTTCCEEEEEECCTTTTSCC--------------------------------------------------------TT
T ss_pred cCCCCCCeEEEEeCchhhcCCC--------------------------------------------------------CC
Confidence 13469999998765321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+++.. ..++.+..++|+.|.++......+ . ...... ....+......+
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~~---------~~~~~~~~~~~~ 222 (261)
T 3n74_A 157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMG---E--DSEEIR---------KKFRDSIPMGRL 222 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------CTTSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcc---c--CcHHHH---------HHHhhcCCcCCC
Confidence 357999999999988764 358999999999998764422110 0 000000 111112223457
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+.++|+|++++.++.... ..-.|+++++.+|
T Consensus 223 ~~~~dva~~~~~l~s~~~-~~itG~~i~vdgG 253 (261)
T 3n74_A 223 LKPDDLAEAAAFLCSPQA-SMITGVALDVDGG 253 (261)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCCcc-cCcCCcEEEecCC
Confidence 889999999998875332 2234889999887
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=6.2e-17 Score=163.23 Aligned_cols=219 Identities=14% Similarity=0.148 Sum_probs=145.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|. +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 97 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQKS---CDSVVDE---------IKSF---------GYESSG 97 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHHH---HHHHHHH---------HHTT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC---EEEEEcCCHHH---HHHHHHH---------HHhc---------CCceeE
Confidence 4689999999999999999999999985 45666665321 1121111 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 98 ~~~Dl~d-------~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 170 (285)
T 2c07_A 98 YAGDVSK-------KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 170 (285)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 9999995 33334444 3699999999976431 346778999999988888877532 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..+||++||...+... .....|+
T Consensus 171 ~~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 194 (285)
T 2c07_A 171 RYGRIINISSIVGLTGN--------------------------------------------------------VGQANYS 194 (285)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECChhhccCC--------------------------------------------------------CCCchHH
Confidence 56899999998654321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..+++++++||+.|.++.....+ ........... ....++.++|
T Consensus 195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~~~~~~~~~~---------~~~~~~~~~d 256 (285)
T 2c07_A 195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---------EQIKKNIISNI---------PAGRMGTPEE 256 (285)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---------HHHHHHHHTTC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---------HHHHHHHHhhC---------CCCCCCCHHH
Confidence 9999988887654 35899999999999876432111 11111121111 1124789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... ...++++++.++
T Consensus 257 vA~~~~~l~~~~~~-~~~G~~i~v~gG 282 (285)
T 2c07_A 257 VANLACFLSSDKSG-YINGRVFVIDGG 282 (285)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCCCcC-CCCCCEEEeCCC
Confidence 99999988764322 224789999876
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.1e-17 Score=161.19 Aligned_cols=222 Identities=17% Similarity=0.164 Sum_probs=142.5
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++|+|+||||+|+||++++++|++.|..| +++ .|+.. ..+.+.+++ .+. ..++
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V---~~~~~~~~~---~~~~~~~~~---------~~~---------~~~~ 78 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRV---GVNYAANRE---AADAVVAAI---------TES---------GGEA 78 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEE---EEEESSCHH---HHHHHHHHH---------HHT---------TCEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEE---EEEcCCChh---HHHHHHHHH---------Hhc---------CCcE
Confidence 3467899999999999999999999999654 444 33321 122222111 111 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
.++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+..+++++...
T Consensus 79 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 151 (272)
T 4e3z_A 79 VAIPGDVGN-------AADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRM 151 (272)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999995 333334443 689999999986531 346778999999999999988653
Q ss_pred c-----CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 152 V-----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 152 ~-----~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
. +-.++|++||........ .
T Consensus 152 ~~~~~~~~g~iv~isS~~~~~~~~-------------------------------------------------------~ 176 (272)
T 4e3z_A 152 SRLYSGQGGAIVNVSSMAAILGSA-------------------------------------------------------T 176 (272)
T ss_dssp CGGGTCCCEEEEEECCTHHHHCCT-------------------------------------------------------T
T ss_pred HHhccCCCCEEEEEcchHhccCCC-------------------------------------------------------C
Confidence 1 246899999977643211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceee
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..|.+++.. ..++++.+++|+.|.++..... .......... .......
T Consensus 177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~---------~~~~~~~ 239 (272)
T 4e3z_A 177 QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--------GLPDRAREMA---------PSVPMQR 239 (272)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------------CCTTSS
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--------CChHHHHHHh---------hcCCcCC
Confidence 2356999999999987654 3489999999999988643210 0000011111 1112223
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..++|+|++++.++..... .-.|++|++.+|
T Consensus 240 ~~~~edvA~~i~~l~s~~~~-~~tG~~i~vdgG 271 (272)
T 4e3z_A 240 AGMPEEVADAILYLLSPSAS-YVTGSILNVSGG 271 (272)
T ss_dssp CBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCCccc-cccCCEEeecCC
Confidence 56789999999998864332 234889999876
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-16 Score=157.63 Aligned_cols=210 Identities=12% Similarity=0.143 Sum_probs=145.5
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
...+++|+|+||||||+||++++++|++.|....+|+++.|+.......+.+. +. ..+
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~-------------~~---------~~~ 73 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HSN 73 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CTT
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhh-------------cc---------CCc
Confidence 34568999999999999999999999999843346789999866543222211 11 257
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC---------CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN---------ELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~---------~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
+.++.+|++++ +..+.+++ ++|+|||+||... + .+.++..+++|+.|+.++++++.
T Consensus 74 ~~~~~~Dl~~~-------~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (267)
T 1sny_A 74 IHILEIDLRNF-------DAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL 146 (267)
T ss_dssp EEEEECCTTCG-------GGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred eEEEEecCCCh-------HHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHH
Confidence 89999999953 33334444 7999999999765 1 13466789999999999999886
Q ss_pred Hcc---------C-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHh
Q 008315 150 KCV---------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMK 215 (570)
Q Consensus 150 ~~~---------~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (570)
..- + ..+||++||...+.... ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------~~------------------------------------- 183 (267)
T 1sny_A 147 PLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------TD------------------------------------- 183 (267)
T ss_dssp HHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC------CS-------------------------------------
T ss_pred HHHhhcccccccccccCCCceEEEEecccccccCC------CC-------------------------------------
Confidence 531 1 46899999987764321 00
Q ss_pred hccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCc
Q 008315 216 NLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLP 290 (570)
Q Consensus 216 ~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~ 290 (570)
.....|+.||+..|.+++.+ ..+++++++||+.|..+...+
T Consensus 184 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------ 229 (267)
T 1sny_A 184 ----------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------------------ 229 (267)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT------------------------
T ss_pred ----------CCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC------------------------
Confidence 12357999999999998764 358999999999986643210
Q ss_pred eeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEec
Q 008315 291 CLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 291 ~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
...+..+++|+.++.++...... ..+..+++.
T Consensus 230 ---------~~~~~~~~~a~~~~~~~~~~~~~-~~G~~~~~~ 261 (267)
T 1sny_A 230 ---------SAPLDVPTSTGQIVQTISKLGEK-QNGGFVNYD 261 (267)
T ss_dssp ---------TCSBCHHHHHHHHHHHHHHCCGG-GTTCEECTT
T ss_pred ---------CCCCCHHHHHHHHHHHHHhcCcC-CCCcEEccC
Confidence 02367899999999988753221 225555543
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.7e-17 Score=160.35 Aligned_cols=220 Identities=13% Similarity=0.120 Sum_probs=148.6
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+|+||||+ |+||++++++|++.|+ +|+++.|+.......+.+ .++. .+.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~l-------------~~~~---------~~~ 61 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA---ELAFTYQNDKLKGRVEEF-------------AAQL---------GSD 61 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSTTTHHHHHHH-------------HHHT---------TCC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC---EEEEEcCcHHHHHHHHHH-------------HHhc---------CCc
Confidence 678999999999 9999999999999995 467888876222221111 1111 234
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF------------DERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~a 148 (570)
.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 62 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 134 (265)
T 1qsg_A 62 IVLQCDVAE-------DASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKAC 134 (265)
T ss_dssp CEEECCTTC-------HHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred EEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 678999995 333334443 68999999997542 1345678999999999999999
Q ss_pred HHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
... .+-.++|++||...+... ..
T Consensus 135 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 158 (265)
T 1qsg_A 135 RSMLNPGSALLTLSYLGAERAI--------------------------------------------------------PN 158 (265)
T ss_dssp GGGEEEEEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHhccCCEEEEEcchhhccCC--------------------------------------------------------CC
Confidence 764 222589999997654221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+.+.. ..++++.+++|+.|.++.....+ ........+..+.. ...+
T Consensus 159 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~p---------~~~~ 222 (265)
T 1qsg_A 159 YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-------DFRKMLAHCEAVTP---------IRRT 222 (265)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-------THHHHHHHHHHHST---------TSSC
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-------ccHHHHHHHHhcCC---------CCCC
Confidence 357999999999988764 34899999999999886432211 11111211111110 1135
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..++|+|++++.++.... ..-.++++++.++
T Consensus 223 ~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG 253 (265)
T 1qsg_A 223 VTIEDVGNSAAFLCSDLS-AGISGEVVHVDGG 253 (265)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCchh-cCccCCEEEECCC
Confidence 789999999998875332 2224789999887
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-16 Score=158.16 Aligned_cols=221 Identities=16% Similarity=0.156 Sum_probs=150.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|+++|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 58 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA---EVLLTGRNESN---IARIR-------------EEF--------GPRVHA 58 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------GGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------CCcceE
Confidence 6899999999999999999999999996 45788886321 11211 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|+++ .+..+.++ ..+|++||+||..... +.++..+++|+.|+..+++++... .+-
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (255)
T 4eso_A 59 LRSDIAD-------LNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG 131 (255)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 9999995 33333333 3799999999986432 346778999999999999998763 233
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+... .....|+.|
T Consensus 132 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 155 (255)
T 4eso_A 132 GSIVFTSSVADEGGH--------------------------------------------------------PGMSVYSAS 155 (255)
T ss_dssp EEEEEECCGGGSSBC--------------------------------------------------------TTBHHHHHH
T ss_pred CEEEEECChhhcCCC--------------------------------------------------------CCchHHHHH
Confidence 589999998765321 124679999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++.+..++|+.|.++..... ++.+. ....+....... .....+...+|+|
T Consensus 156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~--~~~~~~~~~~~~---------~p~~r~~~pedvA 223 (255)
T 4eso_A 156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVA-GITEA--ERAEFKTLGDNI---------TPMKRNGTADEVA 223 (255)
T ss_dssp HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCT-TSCHH--HHHHHHHHHHHH---------STTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccc-cCChh--hHHHHHHHHhcc---------CCCCCCcCHHHHH
Confidence 99999888754 4489999999999988643211 11110 001111111110 1122356789999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++.. ...-.|+++++.+|
T Consensus 224 ~~v~~L~s~--~~~itG~~i~vdGG 246 (255)
T 4eso_A 224 RAVLFLAFE--ATFTTGAKLAVDGG 246 (255)
T ss_dssp HHHHHHHHT--CTTCCSCEEEESTT
T ss_pred HHHHHHcCc--CcCccCCEEEECCC
Confidence 999988864 22335889999988
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-16 Score=159.65 Aligned_cols=220 Identities=15% Similarity=0.127 Sum_probs=148.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|+++|. +|+++.|.... ..+.+.+++ ++ . ..++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~--~~~~~~~~~---------~~-~--------~~~~~~ 83 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL---KVWINYRSNAE--VADALKNEL---------EE-K--------GYKAAV 83 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHH---------HH-T--------TCCEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHHH---------Hh-c--------CCceEE
Confidence 5789999999999999999999999996 45778885422 122222111 11 1 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 84 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (271)
T 4iin_A 84 IKFDAAS-------ESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS 156 (271)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc
Confidence 9999995 333334443 799999999986432 346778999999999998887542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 157 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 180 (271)
T 4iin_A 157 RFGSVVNVASIIGERGN--------------------------------------------------------MGQTNYS 180 (271)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEechhhcCCC--------------------------------------------------------CCchHhH
Confidence 45789999997664321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+++.. ..++.+..++|+.|.++.....+. ... ...........+...+|
T Consensus 181 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~---------~~~~~~~~~~~~~~p~d 242 (271)
T 4iin_A 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD---------ELK---------ADYVKNIPLNRLGSAKE 242 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------------------CGGGCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH---------HHH---------HHHHhcCCcCCCcCHHH
Confidence 9999999988764 358999999999997754322111 000 00111112235778999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 243 vA~~i~~l~s~~~~-~itG~~i~vdGG 268 (271)
T 4iin_A 243 VAEAVAFLLSDHSS-YITGETLKVNGG 268 (271)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCCCcC-CCcCCEEEeCCC
Confidence 99999988864332 234889999876
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.5e-17 Score=165.01 Aligned_cols=169 Identities=18% Similarity=0.256 Sum_probs=120.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc--HHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES--AALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~--~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+||||||||+||++++++|++.|+ +|++.+|+..+.. ..+.+.+. ++. . ..++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~---~V~~~~r~~~~r~~~~~~~l~~~---------~~~-~--------~~~~ 61 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH---RVYASMRDIVGRNASNVEAIAGF---------ARD-N--------DVDL 61 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCTTTTTHHHHHHHHHH---------HHH-H--------TCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEecCcccccCHHHHHHHHHH---------HHh-c--------CCcE
Confidence 3579999999999999999999999996 4578888643322 22222211 111 1 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHH----
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAK---- 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~---- 149 (570)
.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++.
T Consensus 62 ~~~~~Dvtd-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~ 134 (324)
T 3u9l_A 62 RTLELDVQS-------QVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMR 134 (324)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999995 333345554 79999999997532 13467779999999999999983
Q ss_pred HccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 150 ~~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+. +..++|++||........ ....
T Consensus 135 ~~-~~g~iV~isS~~~~~~~~-------------------------------------------------------~~~~ 158 (324)
T 3u9l_A 135 RQ-KHGLLIWISSSSSAGGTP-------------------------------------------------------PYLA 158 (324)
T ss_dssp HH-TCEEEEEECCGGGTSCCC-------------------------------------------------------SSCH
T ss_pred hc-CCCEEEEEecchhccCCC-------------------------------------------------------Ccch
Confidence 33 568999999987653210 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.|+.||+..|.+.+.. ..++.+++|+|+.|.++
T Consensus 159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 7999999999988765 35899999999999754
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=157.53 Aligned_cols=220 Identities=15% Similarity=0.189 Sum_probs=146.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|.... ..+.+.++ ++.. ..++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~--~~~~~~~~---------~~~~---------~~~~~~ 58 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA---NVVVNYAGNEQ--KANEVVDE---------IKKL---------GSDAIA 58 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCCHH--HHHHHHHH---------HHhc---------CCcEEE
Confidence 4789999999999999999999999996 45677773211 11111111 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|++||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 59 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (246)
T 2uvd_A 59 VRADVAN-------AEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ 131 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344444 799999999975431 346778999999988877766431 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (246)
T 2uvd_A 132 RHGRIVNIASVVGVTGN--------------------------------------------------------PGQANYV 155 (246)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCHHhcCCC--------------------------------------------------------CCCchHH
Confidence 56899999998654221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++++++|+.|.++.....+ +. ....+.... + ...++..+|
T Consensus 156 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~------~~~~~~~~~----p-----~~~~~~~~d 217 (246)
T 2uvd_A 156 AAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD---EN------IKAEMLKLI----P-----AAQFGEAQD 217 (246)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC---TT------HHHHHHHTC----T-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC---HH------HHHHHHhcC----C-----CCCCcCHHH
Confidence 9999888877653 45899999999999876432211 10 011111111 1 124789999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ..-.++++++.++
T Consensus 218 vA~~~~~l~s~~~-~~~tG~~~~vdgG 243 (246)
T 2uvd_A 218 IANAVTFFASDQS-KYITGQTLNVDGG 243 (246)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHcCchh-cCCCCCEEEECcC
Confidence 9999998885332 2224788998876
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.4e-17 Score=161.03 Aligned_cols=218 Identities=14% Similarity=0.141 Sum_probs=148.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.|.. |+++.|.... ..+.+.+++ +.. ..++.+
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~~---------~~~---------~~~~~~ 82 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAK---VAVNYASSAG--AADEVVAAI---------AAA---------GGEAFA 82 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCCChH--HHHHHHHHH---------Hhc---------CCcEEE
Confidence 57999999999999999999999999964 4677774321 112222111 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .
T Consensus 83 ~~~D~~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 155 (269)
T 4dmm_A 83 VKADVSQ-------ESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ 155 (269)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344444 789999999986431 456778999999999999987542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 156 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 179 (269)
T 4dmm_A 156 RSGRIINIASVVGEMGN--------------------------------------------------------PGQANYS 179 (269)
T ss_dssp TCCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhcCCC--------------------------------------------------------CCchhHH
Confidence 45689999997654321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++.+++|+.|.++..... . . ...... .....+..++|
T Consensus 180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-------~---~--~~~~~~---------~p~~r~~~~~d 238 (269)
T 4dmm_A 180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-------A---A--EKLLEV---------IPLGRYGEAAE 238 (269)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-------H---H--HHHGGG---------CTTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-------c---H--HHHHhc---------CCCCCCCCHHH
Confidence 9999888777654 4589999999999987643210 0 0 111111 11224577899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..+...--.|+++++.+|
T Consensus 239 vA~~v~~l~s~~~~~~itG~~i~vdGG 265 (269)
T 4dmm_A 239 VAGVVRFLAADPAAAYITGQVINIDGG 265 (269)
T ss_dssp HHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred HHHHHHHHhCCcccCCCcCCEEEECCC
Confidence 999999988753222234789999887
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=160.44 Aligned_cols=220 Identities=12% Similarity=0.084 Sum_probs=149.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.|.. |+++.|+... +...+++. + ...++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~r~~~~----~~~~~~~~---------~---------~~~~~~~ 83 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAH---VLAWGRTDGV----KEVADEIA---------D---------GGGSAEA 83 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSTHH----HHHHHHHH---------T---------TTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCHHHH----HHHHHHHH---------h---------cCCcEEE
Confidence 57999999999999999999999999964 5666665321 12211111 1 0256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+. ..+|++||+||..... +.++..+++|+.|+.++++++... .+
T Consensus 84 ~~~Dv~d-------~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 156 (273)
T 3uf0_A 84 VVADLAD-------LEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG 156 (273)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCC-------HHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 33223333 3799999999986431 346778999999999999987432 25
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 157 ~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 180 (273)
T 3uf0_A 157 SGRIVTIASMLSFQGG--------------------------------------------------------RNVAAYAA 180 (273)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------SSCHHHHH
T ss_pred CCEEEEEcchHhcCCC--------------------------------------------------------CCChhHHH
Confidence 5789999998765321 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++++..++|+.|.++..... .........+..+. ....+..++|+
T Consensus 181 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~~pedv 244 (273)
T 3uf0_A 181 SKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-------RADDERAAEITARI---------PAGRWATPEDM 244 (273)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHHHS---------TTSSCBCGGGG
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-------ccCHHHHHHHHhcC---------CCCCCCCHHHH
Confidence 999999988765 3589999999999987543211 00111111111111 11245678999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++..... .-.|+++++.+|
T Consensus 245 a~~v~~L~s~~a~-~itG~~i~vdGG 269 (273)
T 3uf0_A 245 VGPAVFLASDAAS-YVHGQVLAVDGG 269 (273)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHhCchhc-CCcCCEEEECcC
Confidence 9999988864332 234889999887
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-16 Score=158.75 Aligned_cols=230 Identities=15% Similarity=0.166 Sum_probs=147.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.|.. |+++.|+... ..+.+.++ +++.. ..++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~--~~~~~~~~---------~~~~~--------~~~~~~ 59 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDAA--EIEKVRAG---------LAAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCHH--HHHHHHHH---------HHHHH--------TSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCcch--HHHHHHHH---------HHhcc--------CCcEEE
Confidence 57899999999999999999999999964 5777776432 01222211 11111 146788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 60 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 132 (260)
T 1x1t_A 60 DGADLSK-------GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 79999999997542 1346778999999999999988542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (260)
T 1x1t_A 133 GFGRIINIASAHGLVAS--------------------------------------------------------ANKSAYV 156 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECcHHhCcCC--------------------------------------------------------CCCchHH
Confidence 46899999998765321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCccccccch--HHHHHHHhcCCCceeecCCCceeecch
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVEDLKTI--NALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~~~~--~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+.+.. ..++.+.+++|+.|.++..... +.+... .+. ...... +.........+..
T Consensus 157 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~p~~~~~~ 227 (260)
T 1x1t_A 157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQETAARE--------LLSEKQPSLQFVT 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------CHHHHCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccc-cCCchHHHHHH--------HhhccCCCCCCcC
Confidence 9999999988754 3489999999999988643211 000000 000 000000 0000011234788
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++.... ....++++++.++
T Consensus 228 p~dva~~~~~l~s~~~-~~~tG~~~~vdgG 256 (260)
T 1x1t_A 228 PEQLGGTAVFLASDAA-AQITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhChhh-cCCCCCEEEECCC
Confidence 9999999998886432 2234789999876
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=8.9e-17 Score=161.81 Aligned_cols=223 Identities=14% Similarity=0.111 Sum_probs=151.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+... .+.+.+++.. ...++.+
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~~~~------------------~~~~~~~ 61 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA---KVVVTARNGNA---LAELTDEIAG------------------GGGEAAA 61 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECCSCHHH---HHHHHHHHTT------------------TTCCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHHHh------------------cCCcEEE
Confidence 5899999999999999999999999996 45677775321 2222211110 1257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 62 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 134 (280)
T 3tox_A 62 LAGDVGD-------EALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAA 134 (280)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999995 333344443 79999999996522 1346788999999999999988643
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||...+... + .....|
T Consensus 135 ~~~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y 159 (280)
T 3tox_A 135 LGGGSLTFTSSFVGHTAG--------F-----------------------------------------------AGVAPY 159 (280)
T ss_dssp TTCEEEEEECCSBTTTBC--------C-----------------------------------------------TTCHHH
T ss_pred cCCCEEEEEcChhhCcCC--------C-----------------------------------------------CCchhH
Confidence 134689999997765211 0 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCC-CCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEP-FPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p-~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+.+.. ..++.+..|+|+.|.++.... .++... .....+... .....+..+
T Consensus 160 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~~~---------~p~~r~~~p 224 (280)
T 3tox_A 160 AASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAP------ETRGFVEGL---------HALKRIARP 224 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCT------HHHHHHHTT---------STTSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCH------HHHHHHhcc---------CccCCCcCH
Confidence 99999999988764 458999999999998864321 111000 111111111 112346789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... --.|+++++.+|
T Consensus 225 edvA~~v~~L~s~~a~-~itG~~i~vdGG 252 (280)
T 3tox_A 225 EEIAEAALYLASDGAS-FVTGAALLADGG 252 (280)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccc-CCcCcEEEECCC
Confidence 9999999998864332 234889999887
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-17 Score=161.74 Aligned_cols=209 Identities=9% Similarity=0.141 Sum_probs=137.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.|.. .+|+++.|+..... .+. +. ...++.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~-~~V~~~~r~~~~~~---~l~-------------~~--------~~~~~~~ 55 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNI-RHIIATARDVEKAT---ELK-------------SI--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTC-CEEEEEESSGGGCH---HHH-------------TC--------CCTTEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCC-cEEEEEecCHHHHH---HHH-------------hc--------cCCceEE
Confidence 36799999999999999999999998821 24678888654321 111 00 0257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---------CccEEEEcCccCC-c-------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---------ELDVMVNSAAITK-F-------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---------~vdiVih~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||... . .+.++..+++|+.|+.++++++...
T Consensus 56 ~~~D~~~-------~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 128 (250)
T 1yo6_A 56 LPLTVTC-------DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLL 128 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999995 333345544 8999999999765 2 1346778999999999999887653
Q ss_pred --c------C-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcc
Q 008315 152 --V------K-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 152 --~------~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
. + ..+||++||...+..... +..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~~~~~--------------------------------------- 166 (250)
T 1yo6_A 129 KNAASKESGDQLSVSRAAVITISSGLGSITDNT---SGSAQ--------------------------------------- 166 (250)
T ss_dssp HHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC---STTSS---------------------------------------
T ss_pred hhcccccCCCcccCCCcEEEEeccCccccCCcc---ccccc---------------------------------------
Confidence 1 2 579999999876543210 00000
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceee
Q 008315 219 TERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLV 293 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~ 293 (570)
.....|+.||+..|.+++.+ ..++.+.++||+.|.++....
T Consensus 167 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------------- 212 (250)
T 1yo6_A 167 -------FPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------------- 212 (250)
T ss_dssp -------SCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC---------------------------
Confidence 13467999999999988764 348999999999986642210
Q ss_pred cCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEecc
Q 008315 294 GETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 294 ~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s 333 (570)
..+++.+++|++++.++..... ...+..+.+.+
T Consensus 213 ------~~~~~~~~~a~~~~~~~~~~~~-~~~G~~~~~~g 245 (250)
T 1yo6_A 213 ------NAALTVEQSTAELISSFNKLDN-SHNGRFFMRNL 245 (250)
T ss_dssp ------------HHHHHHHHHHHTTCCG-GGTTCEEETTE
T ss_pred ------CCCCCHHHHHHHHHHHHhcccc-cCCCeEEEECC
Confidence 1357889999999998864321 11245555543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.6e-16 Score=155.87 Aligned_cols=225 Identities=15% Similarity=0.132 Sum_probs=147.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 74 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA---RVYTCSRNEKE---LDECLEI---------WREK---------GLNVEG 74 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 5789999999999999999999999996 46788886421 1111111 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.++ ..+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 75 ~~~D~~~-------~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 147 (273)
T 1ae1_A 75 SVCDLLS-------RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 147 (273)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 33333444 5799999999975421 346778899999999999988431
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 148 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 171 (273)
T 1ae1_A 148 SQNGNVIFLSSIAGFSAL--------------------------------------------------------PSVSLY 171 (273)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcCHhhcCCC--------------------------------------------------------CCcchh
Confidence 245799999998876432 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++++.+++|+.|.++...... ............+.... + ...+...+
T Consensus 172 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~----p-----~~r~~~p~ 239 (273)
T 1ae1_A 172 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAI---KKNPHQKEEIDNFIVKT----P-----MGRAGKPQ 239 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHS----T-----TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhh---hcccCcHHHHHHHHhcC----C-----CCCCcCHH
Confidence 99999999988764 34899999999999886532110 00000011111111100 1 12367899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ..-.++++++.++
T Consensus 240 dvA~~v~~l~s~~~-~~~tG~~i~vdGG 266 (273)
T 1ae1_A 240 EVSALIAFLCFPAA-SYITGQIIWADGG 266 (273)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCccc-cCcCCCEEEECCC
Confidence 99999988875332 2224789999876
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=162.15 Aligned_cols=227 Identities=11% Similarity=0.158 Sum_probs=148.4
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.+ .++...+. ....++.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~~~~----~~~~~~~ 75 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLER---LKSAAD---------ELQANLPP----TKQARVI 75 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHTSCT----TCCCCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHH---------HHHhhccc----cCCccEE
Confidence 46889999999999999999999999996 46788886321 111111 12221110 0125789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 76 ~~~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 148 (303)
T 1yxm_A 76 PIQCNIRN-------EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK 148 (303)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH
T ss_pred EEecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999995 333344443 59999999996432 1345677999999999999998662
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....+. .....|
T Consensus 149 ~~~~~iv~isS~~~~~~---------------------------------------------------------~~~~~Y 171 (303)
T 1yxm_A 149 EHGGSIVNIIVPTKAGF---------------------------------------------------------PLAVHS 171 (303)
T ss_dssp HHCEEEEEECCCCTTCC---------------------------------------------------------TTCHHH
T ss_pred hcCCeEEEEEeecccCC---------------------------------------------------------Ccchhh
Confidence 13478999999872211 123568
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCC-CCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK-EPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~-~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+.+.. ..+++++++||+.|+++.. .....+... .+ ....... ....++.+
T Consensus 172 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~------~~----~~~~~~~-----p~~~~~~~ 236 (303)
T 1yxm_A 172 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS------FF----EGSFQKI-----PAKRIGVP 236 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG------GG----TTGGGGS-----TTSSCBCT
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchH------HH----HHHHhcC-----cccCCCCH
Confidence 88888888877654 3489999999999998731 111111110 00 0000011 11246789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++.... ....++++++.++
T Consensus 237 ~dvA~~i~~l~~~~~-~~~~G~~~~v~gG 264 (303)
T 1yxm_A 237 EEVSSVVCFLLSPAA-SFITGQSVDVDGG 264 (303)
T ss_dssp HHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCccc-ccCCCcEEEECCC
Confidence 999999998885332 2234789999887
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=160.03 Aligned_cols=220 Identities=19% Similarity=0.164 Sum_probs=148.4
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||| |+||++++++|++.|. +|+++.|+... .+.+. + +.++. .++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-~---------l~~~~---------~~~ 73 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGA---QLAFTYATPKL---EKRVR-E---------IAKGF---------GSD 73 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEESSGGG---HHHHH-H---------HHHHT---------TCC
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC---EEEEEeCCHHH---HHHHH-H---------HHHhc---------CCe
Confidence 578999999999 9999999999999995 46788887531 11221 1 11111 236
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------D---ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~---~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|+++ .+..+.+++ .+|+|||+||.... + +.++..+++|+.|+.++++++.
T Consensus 74 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 146 (285)
T 2p91_A 74 LVVKCDVSL-------DEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELL 146 (285)
T ss_dssp CEEECCTTC-------HHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 789999995 333334443 68999999997542 1 3466789999999999999987
Q ss_pred Hc-c-CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 150 KC-V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 150 ~~-~-~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.. . +-.++|++||...+... ..
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~ 170 (285)
T 2p91_A 147 PLMEGRNGAIVTLSYYGAEKVV--------------------------------------------------------PH 170 (285)
T ss_dssp GGGTTSCCEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHHHHcCCEEEEEccchhccCC--------------------------------------------------------CC
Confidence 64 1 23689999997654321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..|.+++.. ..++.+.+++|+.|.++.....+. ...+...+..... ...+
T Consensus 171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~p---------~~~~ 234 (285)
T 2p91_A 171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG-------FHLLMEHTTKVNP---------FGKP 234 (285)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT-------HHHHHHHHHHHST---------TSSC
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc-------hHHHHHHHHhcCC---------CCCC
Confidence 357999999999988764 358999999999998865422111 1111111111110 1135
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..++|+|++++.++.... ....+++|++.++
T Consensus 235 ~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgg 265 (285)
T 2p91_A 235 ITIEDVGDTAVFLCSDWA-RAITGEVVHVDNG 265 (285)
T ss_dssp CCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCCcc-cCCCCCEEEECCC
Confidence 679999999998875332 2224789999876
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=158.04 Aligned_cols=222 Identities=11% Similarity=0.095 Sum_probs=148.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|+++|. +|+++.|+... .+.+.+++.+ ...++.+
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~~------------------~~~~~~~ 59 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA---RVVITGRTKEK---LEEAKLEIEQ------------------FPGQILT 59 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHCC------------------STTCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHHh------------------cCCcEEE
Confidence 6899999999999999999999999995 45778876432 1222211110 1257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc----
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---- 151 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 60 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~ 132 (257)
T 3imf_A 60 VQMDVRN-------TDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK 132 (257)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 9999995 333344443 78999999996432 1346778999999999999988432
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||....... .....|
T Consensus 133 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (257)
T 3imf_A 133 GIKGNIINMVATYAWDAG--------------------------------------------------------PGVIHS 156 (257)
T ss_dssp TCCCEEEEECCGGGGSCC--------------------------------------------------------TTCHHH
T ss_pred CCCcEEEEECchhhccCC--------------------------------------------------------CCcHHH
Confidence 235789999998765321 123579
Q ss_pred HHHHHHHHHHHHHh------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 232 VFTKTMGEMIMQQS------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+.+.. ..++++..++|+.|.++..... .|... .. ....... .....+...
T Consensus 157 ~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~-~~----~~~~~~~---------~p~~r~~~p 221 (257)
T 3imf_A 157 AAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE-EM----AKRTIQS---------VPLGRLGTP 221 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CC----SHHHHTT---------STTCSCBCH
T ss_pred HHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh-cccCH-HH----HHHHHhc---------CCCCCCcCH
Confidence 99999988887653 2389999999999987643210 11110 00 0011111 112346789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... --.|+++++.+|
T Consensus 222 edvA~~v~~L~s~~~~-~itG~~i~vdGG 249 (257)
T 3imf_A 222 EEIAGLAYYLCSDEAA-YINGTCMTMDGG 249 (257)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCchhc-CccCCEEEECCC
Confidence 9999999988864332 234889999887
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=158.57 Aligned_cols=221 Identities=14% Similarity=0.146 Sum_probs=148.1
Q ss_pred cCCCEEEEECCccH-hHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGF-VAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+|+||||||+ ||++++++|+++|. +|+++.|+.... +...++ +++.. ..++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------l~~~~--------~~~~~ 76 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA---DVVISDYHERRL---GETRDQ---------LADLG--------LGRVE 76 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHHHH---------HHTTC--------SSCEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC---EEEEecCCHHHH---HHHHHH---------HHhcC--------CCceE
Confidence 68999999999985 99999999999995 457777764321 111111 11111 25789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++.+...
T Consensus 77 ~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 149 (266)
T 3o38_A 77 AVVCDVTS-------TEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRG 149 (266)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCC-------HHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 333334443 689999999975431 346778999999999999988653
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
++-.++|++||...+... .....
T Consensus 150 ~~~~~~iv~~sS~~~~~~~--------------------------------------------------------~~~~~ 173 (266)
T 3o38_A 150 VDHGGVIVNNASVLGWRAQ--------------------------------------------------------HSQSH 173 (266)
T ss_dssp SSCCEEEEEECCGGGTCCC--------------------------------------------------------TTCHH
T ss_pred cCCCeEEEEeCCHHHcCCC--------------------------------------------------------CCCch
Confidence 244689999998765321 12467
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..|.+++.. ..++.+..++|+.|.++..+.... .... ...........+..+
T Consensus 174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~---------~~~~~~~~~~r~~~~ 236 (266)
T 3o38_A 174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS--------SELL---------DRLASDEAFGRAAEP 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------CCTTSSCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc--------HHHH---------HHHHhcCCcCCCCCH
Confidence 999999999988754 358999999999998764321100 0000 011112223456789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... .-.|+++++.+|
T Consensus 237 ~dva~~i~~l~s~~~~-~~tG~~i~vdgG 264 (266)
T 3o38_A 237 WEVAATIAFLASDYSS-YMTGEVVSVSSQ 264 (266)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHHHHHHHcCcccc-CccCCEEEEcCC
Confidence 9999999988864332 234889999876
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.8e-16 Score=155.29 Aligned_cols=219 Identities=13% Similarity=0.103 Sum_probs=140.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+.... ...+.+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~~~-------------------------------~~~~~~ 50 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA---KVTGFDQAFTQE-------------------------------QYPFAT 50 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCCCSS-------------------------------CCSSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCchhhh-------------------------------cCCceE
Confidence 5789999999999999999999999995 457888865310 012678
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++... .
T Consensus 51 ~~~D~~d-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 123 (250)
T 2fwm_X 51 EVMDVAD-------AAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ 123 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc
Confidence 8999995 333345544 799999999975431 346788999999999999988321 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (250)
T 2fwm_X 124 RGGAIVTVASDAAHTPR--------------------------------------------------------IGMSAYG 147 (250)
T ss_dssp TCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEECchhhCCCC--------------------------------------------------------CCCchHH
Confidence 46799999998765321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++++.++||+.|.++....... .+.. ...-+...... .........+...+|
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~--~~~~~~~~~~~-----~~~~~p~~~~~~p~d 219 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDA--EEQRIRGFGEQ-----FKLGIPLGKIARPQE 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------------CHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhH--HHHHHhhhhhc-----ccccCCCCCCcCHHH
Confidence 9999999988764 358999999999998865321100 0000 00000000000 000011224678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.++++++.++
T Consensus 220 vA~~v~~l~s~~~~-~~tG~~i~vdGG 245 (250)
T 2fwm_X 220 IANTILFLASDLAS-HITLQDIVVDGG 245 (250)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 99999988864322 234788998876
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-16 Score=159.19 Aligned_cols=215 Identities=13% Similarity=0.137 Sum_probs=146.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|+++|. +|+++.|+... ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~--------------------------------~~~~~~ 50 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGS---KVIDLSIHDPG--------------------------------EAKYDH 50 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSCCC--------------------------------SCSSEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEecCccc--------------------------------CCceEE
Confidence 5899999999999999999999999996 45788886532 145788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++++... .
T Consensus 51 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 123 (264)
T 2dtx_A 51 IECDVTN-------PDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS 123 (264)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 699999999975432 346778999999999999988653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 124 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 147 (264)
T 2dtx_A 124 RDPSIVNISSVQASIIT--------------------------------------------------------KNASAYV 147 (264)
T ss_dssp SSCEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCchhccCC--------------------------------------------------------CCchhHH
Confidence 45799999998765321 1236799
Q ss_pred HHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchH----HHHHHHhcCCCceeecCCCceeecch
Q 008315 233 FTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTIN----ALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~----~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+.+.. ...+.+++++|+.|.++......... ..... .....+..+ .....++.
T Consensus 148 ~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~p~~~~~~ 216 (264)
T 2dtx_A 148 TSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELE--VGSDPMRIEKKISEWGHE---------HPMQRIGK 216 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHH--HCSCHHHHHHHHHHHHHH---------STTSSCBC
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcc--cccCchhhHHHHHHHHhc---------CCCCCCcC
Confidence 9999999988764 22389999999998664211000000 00000 111111111 01124789
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++.... ....++++++.++
T Consensus 217 p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG 245 (264)
T 2dtx_A 217 PQEVASAVAFLASREA-SFITGTCLYVDGG 245 (264)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchh-cCCCCcEEEECCC
Confidence 9999999998886432 2234789998876
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.73 E-value=6.6e-17 Score=159.73 Aligned_cols=216 Identities=13% Similarity=0.123 Sum_probs=148.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|+++|.. |+++.|+... .+.+.+ +. ..+...
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~---V~~~~r~~~~---~~~~~~-------------~~--------~~~~~~ 59 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAK---VIGTATSESG---AQAISD-------------YL--------GDNGKG 59 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHHH-------------HH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHH-------------Hh--------cccceE
Confidence 58999999999999999999999999964 5677775322 112111 11 145678
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 60 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 132 (248)
T 3op4_A 60 MALNVTN-------PESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK 132 (248)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333345444 79999999997643 1356778999999999999988542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 133 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (248)
T 3op4_A 133 RQGRIINVGSVVGTMGN--------------------------------------------------------AGQANYA 156 (248)
T ss_dssp TCEEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcchhhcCCC--------------------------------------------------------CCChHHH
Confidence 45789999997654221 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++..++|+.|..+.....+. ........+. ....+..++|
T Consensus 157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~~~---------p~~r~~~p~d 218 (248)
T 3op4_A 157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND---------EQRTATLAQV---------PAGRLGDPRE 218 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH---------HHHHHHHHTC---------TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH---------HHHHHHHhcC---------CCCCCcCHHH
Confidence 9999888777654 458999999999997764322110 1111111111 1234678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 219 va~~v~~L~s~~~~-~itG~~i~vdgG 244 (248)
T 3op4_A 219 IASAVAFLASPEAA-YITGETLHVNGG 244 (248)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHcCCccC-CccCcEEEECCC
Confidence 99999888764322 234789999876
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.7e-17 Score=163.60 Aligned_cols=221 Identities=13% Similarity=0.126 Sum_probs=151.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+.... .+...+ .. ++. ..++.+
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~--~~~~~~-~~---------~~~--------~~~~~~ 101 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA---NIAIAYLDEEGD--ANETKQ-YV---------EKE--------GVKCVL 101 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHHH--HHHHHH-HH---------HTT--------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchHH--HHHHHH-HH---------Hhc--------CCcEEE
Confidence 5789999999999999999999999996 457777765321 111111 10 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
+.+|+++ ++..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... ++
T Consensus 102 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 174 (291)
T 3ijr_A 102 LPGDLSD-------EQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ 174 (291)
T ss_dssp EESCTTS-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 9999995 333334443 68999999997532 1346788999999999999999763 33
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+... .....|+.
T Consensus 175 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 198 (291)
T 3ijr_A 175 GDVIINTASIVAYEGN--------------------------------------------------------ETLIDYSA 198 (291)
T ss_dssp TCEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHH
T ss_pred CCEEEEEechHhcCCC--------------------------------------------------------CCChhHHH
Confidence 4589999998765322 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.. ..++.+..++|+.|.++.... ..+ ......+.. ......+..++|+
T Consensus 199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~-----~~~~~~~~~---------~~p~~r~~~p~dv 261 (291)
T 3ijr_A 199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFD-----EKKVSQFGS---------NVPMQRPGQPYEL 261 (291)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---HSC-----HHHHHHTTT---------TSTTSSCBCGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---cCC-----HHHHHHHHc---------cCCCCCCcCHHHH
Confidence 999999988764 348999999999998753210 000 111111111 1223346778999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++..... .-.|+++++.+|
T Consensus 262 A~~v~~L~s~~~~-~itG~~i~vdGG 286 (291)
T 3ijr_A 262 APAYVYLASSDSS-YVTGQMIHVNGG 286 (291)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHhCCccC-CCcCCEEEECCC
Confidence 9999988864332 234889999887
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=157.15 Aligned_cols=218 Identities=15% Similarity=0.138 Sum_probs=143.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+.... ..+.+. +. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~-~~~~~~--------------~~--------~~~~~~ 58 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGA---DIAIADLVPAPE-AEAAIR--------------NL--------GRRVLT 58 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCHH-HHHHHH--------------HT--------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEcCCchhH-HHHHHH--------------hc--------CCcEEE
Confidence 6899999999999999999999999996 467888875211 111111 11 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.++ ..+|+|||+||..... +.++..+++|+.|+.++++++.. + .
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 131 (249)
T 2ew8_A 59 VKCDVSQ-------PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 131 (249)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 33333443 4799999999975421 34677899999999888887533 1 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (249)
T 2ew8_A 132 GWGRIINLTSTTYWLKI--------------------------------------------------------EAYTHYI 155 (249)
T ss_dssp TCEEEEEECCGGGGSCC--------------------------------------------------------SSCHHHH
T ss_pred CCeEEEEEcchhhccCC--------------------------------------------------------CCchhHH
Confidence 46899999998776421 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCC-CCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKE-PFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~-p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..|.+.+.. ..++++.+++|+.|.++... ... ... ... ..... .....+...+
T Consensus 156 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~---~~~----~~~~~-------~~~~~~~~p~ 218 (249)
T 2ew8_A 156 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL---SAM---FDV----LPNML-------QAIPRLQVPL 218 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------CTT-------SSSCSCCCTH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccc---cch---hhH----HHHhh-------CccCCCCCHH
Confidence 9999999988764 35899999999999876432 110 000 000 00000 1112467899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ..-.++++++.++
T Consensus 219 dva~~~~~l~s~~~-~~~tG~~~~vdGG 245 (249)
T 2ew8_A 219 DLTGAAAFLASDDA-SFITGQTLAVDGG 245 (249)
T ss_dssp HHHHHHHHHTSGGG-TTCCSCEEEESSS
T ss_pred HHHHHHHHHcCccc-CCCCCcEEEECCC
Confidence 99999998875332 2234788998876
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.4e-16 Score=156.92 Aligned_cols=210 Identities=12% Similarity=0.112 Sum_probs=142.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||+++++.|++.|.. |+++.|+.... .+.+. ..++.+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~~~~--~~~~~------------------------~~~~~~ 75 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHR---VIISYRTEHAS--VTELR------------------------QAGAVA 75 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESSCCHH--HHHHH------------------------HHTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEeCChHHH--HHHHH------------------------hcCCeE
Confidence 57899999999999999999999999965 47888876432 12211 023688
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .+
T Consensus 76 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~ 148 (260)
T 3gem_A 76 LYGDFSC-------ETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE 148 (260)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999995 333334443 689999999975422 335678999999999999988642 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 149 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 172 (260)
T 3gem_A 149 VADIVHISDDVTRKGS--------------------------------------------------------SKHIAYCA 172 (260)
T ss_dssp SCEEEEECCGGGGTCC--------------------------------------------------------SSCHHHHH
T ss_pred CcEEEEECChhhcCCC--------------------------------------------------------CCcHhHHH
Confidence 5689999998765321 12357999
Q ss_pred HHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 234 TKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 234 sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
||+..|.+.+.. ..++.+..++|+.|.++...+ +.+. ...... ....-+..++|+|
T Consensus 173 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~~~~----------~~~~~~---------~p~~r~~~~edva 232 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-AAYR----------ANALAK---------SALGIEPGAEVIY 232 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------------------------CCSCCCCCTHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-HHHH----------HHHHhc---------CCCCCCCCHHHHH
Confidence 999999887754 457999999999997653210 1111 111110 1112245689999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++. ...-.|+++++.+|
T Consensus 233 ~~v~~L~~---~~~itG~~i~vdGG 254 (260)
T 3gem_A 233 QSLRYLLD---STYVTGTTLTVNGG 254 (260)
T ss_dssp HHHHHHHH---CSSCCSCEEEESTT
T ss_pred HHHHHHhh---CCCCCCCEEEECCC
Confidence 99998873 22334889999887
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.3e-17 Score=162.43 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=146.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+..... .+.+++ + +. ..++.+
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~---~~~~~~---------~-~~--------~~~~~~ 87 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA---DVAIWYNSHPADE---KAEHLQ---------K-TY--------GVHSKA 87 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC---EEEEEESSSCCHH---HHHHHH---------H-HH--------CSCEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHHH---HHHHHH---------H-hc--------CCcceE
Confidence 5899999999999999999999999996 4678888764422 111111 1 11 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc------c---cCHHHHHHHHHHH----HHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF------D---ERYDVAFGINTLG----AIHLVNFAK 149 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f------~---~~~~~~~~~Nv~g----t~~ll~~a~ 149 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... + +.++..+++|+.| ++.+++.++
T Consensus 88 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 160 (279)
T 3ctm_A 88 YKCNISD-------PKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFK 160 (279)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999995 333334443 49999999997543 1 2356678999999 556666666
Q ss_pred HccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 150 KCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 150 ~~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+. +..+||++||...+.... . ....
T Consensus 161 ~~-~~~~iv~isS~~~~~~~~-------~-----------------------------------------------~~~~ 185 (279)
T 3ctm_A 161 KN-GKGSLIITSSISGKIVNI-------P-----------------------------------------------QLQA 185 (279)
T ss_dssp HH-TCCEEEEECCCTTSCC---------------------------------------------------------CCHH
T ss_pred hc-CCCeEEEECchHhccCCC-------C-----------------------------------------------CCcc
Confidence 54 668999999987542200 0 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..+ .+.+++|+.|.++..... + ......+... . ....+++
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~----~-----~~~~~~~~~~----~-----p~~~~~~ 246 (279)
T 3ctm_A 186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA----S-----KDMKAKWWQL----T-----PLGREGL 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC----C-----HHHHHHHHHH----S-----TTCSCBC
T ss_pred cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc----C-----hHHHHHHHHh----C-----CccCCcC
Confidence 7999999999998765 246 899999999987643211 0 1111111110 0 1124678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++|+|++++.++.... ....++++++.++
T Consensus 247 ~~dvA~~~~~l~s~~~-~~~tG~~i~vdgG 275 (279)
T 3ctm_A 247 TQELVGGYLYLASNAS-TFTTGSDVVIDGG 275 (279)
T ss_dssp GGGTHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCccc-cCccCCEEEECCC
Confidence 9999999998886432 2234789999886
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-16 Score=158.14 Aligned_cols=232 Identities=16% Similarity=0.206 Sum_probs=152.5
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+...++||++|||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +++. ..
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~ 60 (264)
T 3ucx_A 5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGA---DLVLAARTVER---LEDVAKQ---------VTDT---------GR 60 (264)
T ss_dssp --CTTTTCEEEEESCCTTHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TC
T ss_pred cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CC
Confidence 44567999999999999999999999999996 45777875321 1222211 1111 25
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
++.++.+|+++ .+..+.+++ .+|++||+||.... . +.++..+++|+.|+.++++++..
T Consensus 61 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (264)
T 3ucx_A 61 RALSVGTDITD-------DAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133 (264)
T ss_dssp CEEEEECCTTC-------HHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred cEEEEEcCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 78999999995 333344443 68999999987521 1 34677899999999999998754
Q ss_pred c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 151 ~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. ++-.++|++||....... ...
T Consensus 134 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 157 (264)
T 3ucx_A 134 ALEESKGAVVNVNSMVVRHSQ--------------------------------------------------------AKY 157 (264)
T ss_dssp HHHHHTCEEEEECCGGGGCCC--------------------------------------------------------TTC
T ss_pred HHHHcCCEEEEECcchhccCC--------------------------------------------------------Ccc
Confidence 3 112589999998765321 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccc-cc-cchHHHHHHHhcCCCceeecCCCceee
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVE-DL-KTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~-~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
..|+.||+..+.+.+.. ..++.+..++|+.|.++.......... .. .....+...... ......
T Consensus 158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r 228 (264)
T 3ucx_A 158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA---------GSDLKR 228 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT---------TSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc---------cCCccc
Confidence 57999999999988764 458999999999998753211000000 00 001111222222 122345
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..++|+|++++.++..... .-.|+++++.+|
T Consensus 229 ~~~p~dvA~~v~~L~s~~~~-~itG~~i~vdGG 260 (264)
T 3ucx_A 229 LPTEDEVASAILFMASDLAS-GITGQALDVNCG 260 (264)
T ss_dssp CCBHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 77899999999988864332 234889999887
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.2e-16 Score=158.61 Aligned_cols=222 Identities=16% Similarity=0.177 Sum_probs=149.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 77 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA---YVVVADVNEDA---AVRVA-------------NEI--------GSKAFG 77 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 5789999999999999999999999996 45777775321 11111 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++... .
T Consensus 78 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 150 (277)
T 4dqx_A 78 VRVDVSS-------AKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN 150 (277)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344443 799999999975321 346778899999999999988542 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 151 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 174 (277)
T 4dqx_A 151 GGGSIINTTSYTATSAI--------------------------------------------------------ADRTAYV 174 (277)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECchhhCcCC--------------------------------------------------------CCChhHH
Confidence 34699999998765321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++.+..++|+.|.++... ...............+.. ......+..++|
T Consensus 175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~---------~~~~~r~~~ped 242 (277)
T 4dqx_A 175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFT---KIFAEAKDPAKLRSDFNA---------RAVMDRMGTAEE 242 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HHHHTCSCHHHHHHHHHT---------TSTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhh---hhcccccchhHHHHHHHh---------cCcccCCcCHHH
Confidence 9999999988754 45799999999999765310 000000011111111111 112234678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... --.|+++++.+|
T Consensus 243 vA~~v~~L~s~~~~-~itG~~i~vdGG 268 (277)
T 4dqx_A 243 IAEAMLFLASDRSR-FATGSILTVDGG 268 (277)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHhCCccC-CCcCCEEEECCc
Confidence 99999988864332 234889999887
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.6e-17 Score=161.66 Aligned_cols=230 Identities=15% Similarity=0.187 Sum_probs=147.2
Q ss_pred CCccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
|.|+...+ ++||+|+||||+|+||++++++|++.|. +|+++.|........+.+.+++. ..
T Consensus 1 m~~~~~~~-l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~---------~~------ 61 (262)
T 3ksu_A 1 MSLTKYHD-LKNKVIVIAGGIKNLGALTAKTFALESV---NLVLHYHQAKDSDTANKLKDELE---------DQ------ 61 (262)
T ss_dssp ---CCCSC-CTTCEEEEETCSSHHHHHHHHHHTTSSC---EEEEEESCGGGHHHHHHHHHHHH---------TT------
T ss_pred CCCccccC-CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEecCccCHHHHHHHHHHHH---------hc------
Confidence 44433333 5899999999999999999999999996 45677776544433333332221 11
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHH
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~ 146 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+++
T Consensus 62 ---~~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 131 (262)
T 3ksu_A 62 ---GAKVALYQSDLSN-------EEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIK 131 (262)
T ss_dssp ---TCEEEEEECCCCS-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCcEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence 2578999999995 333345443 69999999997532 13467788999999999999
Q ss_pred HHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 147 FAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 147 ~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
++... .+-.++|++||.......
T Consensus 132 ~~~~~m~~~g~iv~isS~~~~~~~-------------------------------------------------------- 155 (262)
T 3ksu_A 132 QAAKHMNPNGHIITIATSLLAAYT-------------------------------------------------------- 155 (262)
T ss_dssp HHHTTEEEEEEEEEECCCHHHHHH--------------------------------------------------------
T ss_pred HHHHhhcCCCEEEEEechhhccCC--------------------------------------------------------
Confidence 98763 344689999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+.+.. ..++.+..+.|+.|..+...... + .... ..........
T Consensus 156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~-----~~~~---------~~~~~~~~~~ 218 (262)
T 3ksu_A 156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---T-----KEST---------AFHKSQAMGN 218 (262)
T ss_dssp CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------CCC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---c-----hHHH---------HHHHhcCccc
Confidence 12356999999999888764 35799999999998654221000 0 0000 0011111223
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+...+|+|++++.++.. . .--.|+++++.++
T Consensus 219 r~~~pedvA~~v~~L~s~-~-~~itG~~i~vdGg 250 (262)
T 3ksu_A 219 QLTKIEDIAPIIKFLTTD-G-WWINGQTIFANGG 250 (262)
T ss_dssp CSCCGGGTHHHHHHHHTT-T-TTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCC-C-CCccCCEEEECCC
Confidence 467789999999988864 2 2234889999887
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=159.00 Aligned_cols=232 Identities=15% Similarity=0.226 Sum_probs=150.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+...+++ .+.. ...++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~l---------~~~~-------~~~~~~~ 62 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLEA---GVQCKAAL---------HEQF-------EPQKTLF 62 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------TTTS-------CGGGEEE
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hhhc-------CCCceEE
Confidence 5789999999999999999999999996 45788886421 11111111 1110 0146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHH----Hcc--CceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAK----KCV--KLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~----~~~--~lk~ 156 (570)
+.+|+++ .+..+.+++ .+|+|||+||... .+.++..+++|+.|+..+.+.+. +.+ +..+
T Consensus 63 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~ 134 (267)
T 2gdz_A 63 IQCDVAD-------QQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGI 134 (267)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred EecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCE
Confidence 9999995 333334443 5799999999764 46688889999998776665543 221 1578
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+.... ....|+.||+
T Consensus 135 iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~~sK~ 158 (267)
T 2gdz_A 135 IINMSSLAGLMPVA--------------------------------------------------------QQPVYCASKH 158 (267)
T ss_dssp EEEECCGGGTSCCT--------------------------------------------------------TCHHHHHHHH
T ss_pred EEEeCCccccCCCC--------------------------------------------------------CCchHHHHHH
Confidence 99999987764311 2357999999
Q ss_pred HHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCC--ccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 237 MGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPG--WVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 237 ~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~g--w~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
..|.+.+.. ..++++.+++|+.|.++....... ...........+.. +.....+++++|
T Consensus 159 a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~d 226 (267)
T 2gdz_A 159 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD------------MIKYYGILDPPL 226 (267)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH------------HHHHHCCBCHHH
T ss_pred HHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH------------HhccccCCCHHH
Confidence 999887642 468999999999997653211100 00000000000000 001123678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhH
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSI 344 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el 344 (570)
+|++++.++... ...+++++++++ ..+++.|+
T Consensus 227 vA~~v~~l~s~~---~~~G~~~~v~gg--~~~~~~~~ 258 (267)
T 2gdz_A 227 IANGLITLIEDD---ALNGAIMKITTS--KGIHFQDY 258 (267)
T ss_dssp HHHHHHHHHHCT---TCSSCEEEEETT--TEEEECCC
T ss_pred HHHHHHHHhcCc---CCCCcEEEecCC--CcccccCc
Confidence 999999988633 234789999987 66776654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=159.45 Aligned_cols=233 Identities=15% Similarity=0.123 Sum_probs=155.4
Q ss_pred hhhhcCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 6 VVEFLENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 6 i~~~~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
....+++|+|+||||+ |+||++++++|++.|. +|+++.|+.+.....+.+ .++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~-------------~~~--------- 62 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGA---ELAFTYVGDRFKDRITEF-------------AAE--------- 62 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGHHHHHHH-------------HHH---------
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC---CEEEEecchhhHHHHHHH-------------HHH---------
Confidence 3456789999999999 9999999999999995 467888874332222221 111
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHH
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF------------DERYDVAFGINTLGAIHL 144 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f------------~~~~~~~~~~Nv~gt~~l 144 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++
T Consensus 63 ~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 135 (271)
T 3ek2_A 63 FGSELVFPCDVAD-------DAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPAL 135 (271)
T ss_dssp TTCCCEEECCTTC-------HHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHH
T ss_pred cCCcEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHH
Confidence 1347889999995 333345443 68999999997542 134677899999999999
Q ss_pred HHHHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccc
Q 008315 145 VNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 145 l~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
++++... .+-.++|++||.......
T Consensus 136 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 161 (271)
T 3ek2_A 136 AKAALPMLSDDASLLTLSYLGAERAI------------------------------------------------------ 161 (271)
T ss_dssp HHHHGGGEEEEEEEEEEECGGGTSBC------------------------------------------------------
T ss_pred HHHHHHHhccCceEEEEeccccccCC------------------------------------------------------
Confidence 9998763 223589999998765321
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCc
Q 008315 224 IHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKT 298 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
.....|+.||+..+.+.+.. ..++.+.+++|+.|.++..... .........+.... .
T Consensus 162 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------~ 223 (271)
T 3ek2_A 162 --PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-------KSFGKILDFVESNS---------P 223 (271)
T ss_dssp --TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-------HHHHHHHHHHHHHS---------T
T ss_pred --CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-------cchHHHHHHHHhcC---------C
Confidence 12468999999999988764 4589999999999987644221 11112222222111 1
Q ss_pred eeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHH
Q 008315 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSIL 345 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~ 345 (570)
...+...+++|++++.++.... ..-.|+++++.+| ..++..++.
T Consensus 224 ~~~~~~pedva~~i~~l~s~~~-~~~tG~~i~vdgG--~~~~~~~~~ 267 (271)
T 3ek2_A 224 LKRNVTIEQVGNAGAFLLSDLA-SGVTAEVMHVDSG--FNAVVGGMA 267 (271)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGG-TTCCSEEEEESTT--GGGBCCCC-
T ss_pred cCCCCCHHHHHHHHHHHcCccc-CCeeeeEEEECCC--eeeehhhhh
Confidence 1235678999999998886432 2234899999998 666665554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-16 Score=161.05 Aligned_cols=170 Identities=17% Similarity=0.185 Sum_probs=119.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|+++|+ +|++..|+... .+.+.++ ++...+ ..++.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~---~Vv~~~r~~~~---~~~~~~~---------l~~~~~-------~~~~~~ 63 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC---KVAIADIRQDS---IDKALAT---------LEAEGS-------GPEVMG 63 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHTC-------GGGEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhcCC-------CCeEEE
Confidence 5789999999999999999999999996 45788886432 1122111 111110 137899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHcc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCV--- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~--- 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++....
T Consensus 64 ~~~Dl~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 136 (319)
T 3ioy_A 64 VQLDVAS-------REGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVER 136 (319)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 9999995 333334443 689999999975321 3467789999999999999886531
Q ss_pred ------CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 153 ------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 153 ------~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+-.++|++||...+... .
T Consensus 137 ~~~~~~~~g~iV~isS~a~~~~~--------------------------------------------------------~ 160 (319)
T 3ioy_A 137 VKAGEQKGGHVVNTASMAAFLAA--------------------------------------------------------G 160 (319)
T ss_dssp HHTTSCCCCEEEEECCGGGTCCC--------------------------------------------------------S
T ss_pred hhccCCCCcEEEEecccccccCC--------------------------------------------------------C
Confidence 13479999998765432 1
Q ss_pred CCchHHHHHH----HHHHHHHHh-cCCCcEEEEeccccccCCC
Q 008315 227 WPNTYVFTKT----MGEMIMQQS-KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 227 ~~n~Y~~sK~----~aE~~v~~~-~~~lp~~IvRPsiV~g~~~ 264 (570)
....|..||+ ++|.+..++ ..++.+++++|+.|.++..
T Consensus 161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 203 (319)
T 3ioy_A 161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIY 203 (319)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcc
Confidence 2467999999 566555555 4589999999999987644
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=157.64 Aligned_cols=219 Identities=15% Similarity=0.132 Sum_probs=145.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+.. ..+.+.+ +. ..++.+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~---~~~~~~~-------------~~--------~~~~~~ 56 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGA---KVAFSDINEA---AGQQLAA-------------EL--------GERSMF 56 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEECSCHH---HHHHHHH-------------HH--------CTTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH---HHHHHHH-------------Hc--------CCceEE
Confidence 5789999999999999999999999996 4577777532 1111111 11 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+..+.+.+.. + .
T Consensus 57 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~ 129 (253)
T 1hxh_A 57 VRHDVSS-------EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET 129 (253)
T ss_dssp ECCCTTC-------HHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 579999999975431 34677899999998887776543 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+ .++|++||...+... .....|+
T Consensus 130 ~-g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (253)
T 1hxh_A 130 G-GSIINMASVSSWLPI--------------------------------------------------------EQYAGYS 152 (253)
T ss_dssp C-EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred C-CEEEEEcchhhcCCC--------------------------------------------------------CCCccHH
Confidence 4 899999998765321 1235799
Q ss_pred HHHHHHHHHHHHh-----cC--CCcEEEEeccccccCCCCC-CCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 233 FTKTMGEMIMQQS-----KE--NLSLVIIRPTIVSGTYKEP-FPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~--~lp~~IvRPsiV~g~~~~p-~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+++.. .. +++++++||+.|.++.... .+ +.. .... +... .. ......+..
T Consensus 153 ~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~--~~~~---~~~~-~~-----~~p~~~~~~ 218 (253)
T 1hxh_A 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP---KGV--SKEM---VLHD-PK-----LNRAGRAYM 218 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC---TTC--CHHH---HBCB-TT-----TBTTCCEEC
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc---hhh--hHHH---Hhhh-hc-----cCccCCCCC
Confidence 9999999988765 23 8999999999998864211 00 000 0000 0000 00 001124678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++..... ...++++++.++
T Consensus 219 ~~dvA~~~~~l~s~~~~-~~tG~~~~vdgG 247 (253)
T 1hxh_A 219 PERIAQLVLFLASDESS-VMSGSELHADNS 247 (253)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHHcCcccc-CCCCcEEEECCC
Confidence 99999999988864322 234789998876
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.72 E-value=6.7e-17 Score=161.46 Aligned_cols=216 Identities=14% Similarity=0.150 Sum_probs=143.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|+++|. +|+++.|+.. ++. ++ .++. ..++.+
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~------~~~-~~---------~~~~--------~~~~~~ 77 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGA---IVGLHGTRED------KLK-EI---------AADL--------GKDVFV 77 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HHHH--------CSSEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-HH---------HHHh--------CCceEE
Confidence 5799999999999999999999999996 4567777532 111 11 1111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 78 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 150 (266)
T 3grp_A 78 FSANLSD-------RKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR 150 (266)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999995 333344443 79999999997642 1456778999999977777766431 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 151 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 174 (266)
T 3grp_A 151 RYGRIINITSIVGVVGN--------------------------------------------------------PGQTNYC 174 (266)
T ss_dssp TCEEEEEECCC---------------------------------------------------------------CHHHHH
T ss_pred CCcEEEEECCHHHcCCC--------------------------------------------------------CCchhHH
Confidence 55799999997654221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++.+++|+.|.++.....+ ......+..+ .....+..++|
T Consensus 175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~p~~r~~~~ed 236 (266)
T 3grp_A 175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---------EKQKEAIMAM---------IPMKRMGIGEE 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---------HHHHHHHHTT---------CTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---------HHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999888877654 45899999999999775332110 1111222221 12234567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... --.|+++++.+|
T Consensus 237 vA~~v~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 3grp_A 237 IAFATVYLASDEAA-YLTGQTLHINGG 262 (266)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CccCCEEEECCC
Confidence 99999988864332 234889999876
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-15 Score=152.95 Aligned_cols=220 Identities=12% Similarity=0.069 Sum_probs=148.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|+++|.. |+++.|.... ..+.+.+++ ++ . ..++.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~l---------~~-~--------~~~~~~ 85 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAA---VALTYVNAAE--RAQAVVSEI---------EQ-A--------GGRAVA 85 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH---------HH-T--------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCCHH--HHHHHHHHH---------Hh-c--------CCcEEE
Confidence 57999999999999999999999999964 4565554321 112222111 11 1 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++... ++-
T Consensus 86 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 158 (271)
T 3v2g_A 86 IRADNRD-------AEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG 158 (271)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT
T ss_pred EECCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 9999995 333344444 799999999975431 346778999999999999998763 345
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... + .....|+.|
T Consensus 159 g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~as 183 (271)
T 3v2g_A 159 GRIITIGSNLAELVP--------W-----------------------------------------------PGISLYSAS 183 (271)
T ss_dssp CEEEEECCGGGTCCC--------S-----------------------------------------------TTCHHHHHH
T ss_pred CEEEEEeChhhccCC--------C-----------------------------------------------CCchHHHHH
Confidence 689999886442110 0 124679999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+.+.. ..++.+..++|+.|.++.....+.+. ..+ .... ....+...+|+|
T Consensus 184 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~------~~~----~~~~---------~~~r~~~pedvA 244 (271)
T 3v2g_A 184 KAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHA------EAQ----RERI---------ATGSYGEPQDIA 244 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSH------HHH----HHTC---------TTSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhH------HHH----HhcC---------CCCCCCCHHHHH
Confidence 99999887654 45899999999999887543221111 111 1111 112356789999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++..... --.|+++++.+|
T Consensus 245 ~~v~fL~s~~~~-~itG~~i~vdGG 268 (271)
T 3v2g_A 245 GLVAWLAGPQGK-FVTGASLTIDGG 268 (271)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCcccC-CccCCEEEeCcC
Confidence 999888754322 234789999876
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=159.44 Aligned_cols=221 Identities=12% Similarity=0.130 Sum_probs=150.1
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+.+++ ++. ..++
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~ 79 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGA---MVIGTATTEAG---AEGIGAAF---------KQA---------GLEG 79 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHH---------HHH---------TCCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCcE
Confidence 346899999999999999999999999996 45777875422 12222111 111 2467
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
..+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 80 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 152 (270)
T 3ftp_A 80 RGAVLNVND-------ATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMM 152 (270)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 889999995 333344444 799999999975432 346778999999999999988532
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|++||....... .....
T Consensus 153 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (270)
T 3ftp_A 153 KARGGRIVNITSVVGSAGN--------------------------------------------------------PGQVN 176 (270)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEECchhhCCCC--------------------------------------------------------CCchh
Confidence 244689999997664321 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++.+++|+.|.++.....+ .......... .....+..+
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~---------~p~~r~~~p 238 (270)
T 3ftp_A 177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP---------QEQQTALKTQ---------IPLGRLGSP 238 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC---------HHHHHHHHTT---------CTTCSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC---------HHHHHHHHhc---------CCCCCCCCH
Confidence 999999888877654 45899999999998765321110 1111111111 122346789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... .-.|+++++.+|
T Consensus 239 edvA~~v~~L~s~~~~-~itG~~i~vdGG 266 (270)
T 3ftp_A 239 EDIAHAVAFLASPQAG-YITGTTLHVNGG 266 (270)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCCCcC-CccCcEEEECCC
Confidence 9999999988753322 234889999887
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=160.27 Aligned_cols=222 Identities=11% Similarity=0.141 Sum_probs=149.9
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
....++||+||||||+|+||++++++|++.|. +|+++.|+.... ..
T Consensus 8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~-------------------------------~~ 53 (269)
T 3vtz_A 8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGA---KVVSVSLDEKSD-------------------------------VN 53 (269)
T ss_dssp --CTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCC--C-------------------------------TT
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhc-------------------------------cC
Confidence 34567899999999999999999999999996 457777765321 13
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+..+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++...
T Consensus 54 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 126 (269)
T 3vtz_A 54 VSDHFKIDVTN-------EEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126 (269)
T ss_dssp SSEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceeEEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46778999995 333344443 799999999975432 346677899999999999987652
Q ss_pred ---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 ---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+..++|++||...+... ...
T Consensus 127 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 150 (269)
T 3vtz_A 127 MLAIGHGSIINIASVQSYAAT--------------------------------------------------------KNA 150 (269)
T ss_dssp HHHHTCEEEEEECCGGGTSBC--------------------------------------------------------TTC
T ss_pred HHHcCCCEEEEECchhhccCC--------------------------------------------------------CCC
Confidence 245799999998776432 124
Q ss_pred chHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCcc--ccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 229 NTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWV--EDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~--~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..|.+.+.. ..++.+..++|+.|.++......... ............+..+ .....+
T Consensus 151 ~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~ 221 (269)
T 3vtz_A 151 AAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ---------HPMGRI 221 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH---------STTSSC
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc---------CCCCCC
Confidence 67999999999988764 44899999999999875321000000 0000001111111111 112346
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..++|+|++++.++..... .-.|+++++.+|
T Consensus 222 ~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 252 (269)
T 3vtz_A 222 GRPEEVAEVVAFLASDRSS-FITGACLTVDGG 252 (269)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCccC-CCcCcEEEECCC
Confidence 7899999999988864432 234889999887
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-16 Score=160.78 Aligned_cols=226 Identities=13% Similarity=0.106 Sum_probs=147.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||||+||++++++|+++|. +|+++.|+.... +.+. ++ ...++.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~---~V~~~~r~~~~~---~~~~-------------~~--------~~~~~~~ 66 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA---TVIMAVRDTRKG---EAAA-------------RT--------MAGQVEV 66 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH-------------TT--------SSSEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH-------------HH--------hcCCeeE
Confidence 5899999999999999999999999995 567888864221 1111 11 1257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCc-----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKF-----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
+.+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++++... ..+++|++|
T Consensus 67 ~~~Dl~d-------~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~is 138 (291)
T 3rd5_A 67 RELDLQD-------LSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVS 138 (291)
T ss_dssp EECCTTC-------HHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEEC
T ss_pred EEcCCCC-------HHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEee
Confidence 9999994 444456665 67999999997542 2456788999999999999999876 457999999
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|...+..... . +....+..+. .....|+.||+..+.+
T Consensus 139 S~~~~~~~~~-~-~~~~~~~~~~-----------------------------------------~~~~~Y~~sK~a~~~~ 175 (291)
T 3rd5_A 139 SMAHWPGRIN-L-EDLNWRSRRY-----------------------------------------SPWLAYSQSKLANLLF 175 (291)
T ss_dssp CGGGTTCCCC-S-SCTTCSSSCC-----------------------------------------CHHHHHHHHHHHHHHH
T ss_pred chhhccCCCC-c-ccccccccCC-----------------------------------------CCcchHHHHHHHHHHH
Confidence 9877643210 0 0000000000 1235799999999988
Q ss_pred HHHh-----cCC--CcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 242 MQQS-----KEN--LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 242 v~~~-----~~~--lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
++.. ..+ +.+..++|+.|..+.....+.. ..... . .. -...-..+.+++|++++.
T Consensus 176 ~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~---------~~~~~----~-~~----~~~~~~~~~~~~A~~~~~ 237 (291)
T 3rd5_A 176 TSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK---------LGDAL----M-SA----ATRVVATDADFGARQTLY 237 (291)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH---------HHHHH----H-HH----HHHHHhCCHHHHHHHHHH
Confidence 8764 234 9999999999977544221110 00000 0 00 011123468999999999
Q ss_pred HHHHhcCCCCCCceEEeccC
Q 008315 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~ 334 (570)
++... ...|+.+++.++
T Consensus 238 l~~~~---~~~G~~~~vdgG 254 (291)
T 3rd5_A 238 AASQD---LPGDSFVGPRFG 254 (291)
T ss_dssp HHHSC---CCTTCEEEETTS
T ss_pred HHcCC---CCCCceeCCccc
Confidence 98752 234778887665
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.8e-16 Score=155.11 Aligned_cols=229 Identities=13% Similarity=0.073 Sum_probs=147.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +++..+ ..++.+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~-------~~~~~~ 68 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSEG---LEASKAA---------VLETAP-------DAEVLT 68 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHCT-------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhhcC-------CceEEE
Confidence 6899999999999999999999999995 45788886421 1111111 111111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+..+++.+.. +
T Consensus 69 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 141 (267)
T 1iy8_A 69 TVADVSD-------EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 141 (267)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999995 333344443 68999999997543 134677899999999887776533 1
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 142 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 165 (267)
T 1iy8_A 142 QGSGMVVNTASVGGIRGI--------------------------------------------------------GNQSGY 165 (267)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------SSBHHH
T ss_pred cCCCEEEEEcchhhccCC--------------------------------------------------------CCCccH
Confidence 156799999998764321 124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++.+.+++|+.|.++...... ....-.........+... .....+...+
T Consensus 166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~ 235 (267)
T 1iy8_A 166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQV---------NPSKRYGEAP 235 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHTT---------CTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhcc---------CCCCCCcCHH
Confidence 99999999888754 35899999999999875321000 000000000000011111 0112467899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... .-.++++++.++
T Consensus 236 dvA~~v~~l~s~~~~-~~tG~~i~vdGG 262 (267)
T 1iy8_A 236 EIAAVVAFLLSDDAS-YVNATVVPIDGG 262 (267)
T ss_dssp HHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-CCCCCEEEECCC
Confidence 999999988753322 234789999876
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-16 Score=160.68 Aligned_cols=221 Identities=14% Similarity=0.031 Sum_probs=150.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+..... .+.+++. +. ...++.+
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~---~~~~~l~---------~~--------~~~~~~~ 95 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA---NVAVAARSPRELS---SVTAELG---------EL--------GAGNVIG 95 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSGGGGH---HHHHHHT---------TS--------SSSCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHHHH---HHHHHHH---------hh--------CCCcEEE
Confidence 5799999999999999999999999996 4578888754322 1111111 10 0257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH---cc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK---CV 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~---~~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++.. ..
T Consensus 96 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 168 (293)
T 3rih_A 96 VRLDVSD-------PGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS 168 (293)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH
T ss_pred EEEeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 33333443 368999999997543 134677899999999999998842 12
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... + .....|+
T Consensus 169 ~~g~iV~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~ 193 (293)
T 3rih_A 169 GRGRVILTSSITGPVTG--------Y-----------------------------------------------PGWSHYG 193 (293)
T ss_dssp SSCEEEEECCSBTTTBB--------C-----------------------------------------------TTCHHHH
T ss_pred CCCEEEEEeChhhccCC--------C-----------------------------------------------CCCHHHH
Confidence 56799999997643110 0 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++++.+++|+.|.++..... .......+..... ...+...+|
T Consensus 194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~p---------~~r~~~p~d 255 (293)
T 3rih_A 194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM---------GEEYISGMARSIP---------MGMLGSPVD 255 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT---------CHHHHHHHHTTST---------TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc---------cHHHHHHHHhcCC---------CCCCCCHHH
Confidence 9999999988754 4589999999999988532110 0122222222211 122456799
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 256 vA~~v~fL~s~~a~-~itG~~i~vdGG 281 (293)
T 3rih_A 256 IGHLAAFLATDEAG-YITGQAIVVDGG 281 (293)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 99999988864332 234889999887
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=161.95 Aligned_cols=220 Identities=14% Similarity=0.142 Sum_probs=149.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|+++|.. |++..|+.... ..+.+.+.+ ++. ..++.+
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~-~~~~~~~~~----------~~~--------~~~~~~ 104 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGAD---VAINYLPAEEE-DAQQVKALI----------EEC--------GRKAVL 104 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCGGGHH-HHHHHHHHH----------HHT--------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEeCCcchh-HHHHHHHHH----------HHc--------CCcEEE
Confidence 57999999999999999999999999964 45666653221 112222111 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 105 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 177 (294)
T 3r3s_A 105 LPGDLSD-------ESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK 177 (294)
T ss_dssp CCCCTTS-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence 9999995 33333443 379999999997431 1346788999999999999998764 22
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||...+.... ....|+.
T Consensus 178 ~g~Iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~a 201 (294)
T 3r3s_A 178 GASIITTSSIQAYQPSP--------------------------------------------------------HLLDYAA 201 (294)
T ss_dssp TCEEEEECCGGGTSCCT--------------------------------------------------------TCHHHHH
T ss_pred CCEEEEECChhhccCCC--------------------------------------------------------CchHHHH
Confidence 24899999988764321 2357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCC---CCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEP---FPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p---~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
||+..|.+.+.. ..++.+..++|+.|.++.... .+.+... + ........+...
T Consensus 202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~----------~---------~~~~p~~r~~~p 262 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQ----------F---------GQQTPMKRAGQP 262 (294)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTT----------T---------TTTSTTSSCBCG
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHH----------H---------HhcCCCCCCcCH
Confidence 999999988754 448999999999998754110 0011000 0 111122345678
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... --.|+++++.+|
T Consensus 263 ~dvA~~v~~L~s~~~~-~itG~~i~vdGG 290 (294)
T 3r3s_A 263 AELAPVYVYLASQESS-YVTAEVHGVCGG 290 (294)
T ss_dssp GGGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 9999999988864332 234889999887
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-16 Score=157.28 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=148.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 79 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC---HVLCADIDGDA---ADAAA-------------TKI--------GCGAAA 79 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHH-------------HHH--------CSSCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHc--------CCcceE
Confidence 6899999999999999999999999996 45777775321 11111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++... .
T Consensus 80 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 152 (277)
T 3gvc_A 80 CRVDVSD-------EQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER 152 (277)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334433 789999999986431 346778999999999999988652 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 153 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 176 (277)
T 3gvc_A 153 GGGAIVNLSSLAGQVAV--------------------------------------------------------GGTGAYG 176 (277)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEEcchhhccCC--------------------------------------------------------CCchhHH
Confidence 45689999997764321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccc-cc-cchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVE-DL-KTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~-~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..|.+.+.. ..++++.+++|+.|.++..+......+ .. ......... .....+..+
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~r~~~p 243 (277)
T 3gvc_A 177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIA-------------RLQGRMAAP 243 (277)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHH-------------HHHSSCBCH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhh-------------ccccCCCCH
Confidence 9999999988754 458999999999998753211000000 00 000000000 011246789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... --.|+++++.+|
T Consensus 244 edvA~~v~~L~s~~a~-~itG~~i~vdGG 271 (277)
T 3gvc_A 244 EEMAGIVVFLLSDDAS-MITGTTQIADGG 271 (277)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccC-CccCcEEEECCc
Confidence 9999999998864332 234789999887
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-16 Score=154.94 Aligned_cols=214 Identities=13% Similarity=0.045 Sum_probs=143.4
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
...-++||+|+||||||+||++++++|+++|. +|+++.|+. +.+. + ..
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~------~~~~-~----------------------~~ 60 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLK-R----------------------SG 60 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHH-H----------------------TC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCH------HHHH-h----------------------hC
Confidence 44557899999999999999999999999996 467888864 1111 0 12
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHH----HHccCc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFA----KKCVKL 154 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a----~~~~~l 154 (570)
++.++ +|+.+ + -+... ..+.++|+|||+||..... +.++..+++|+.|+.++.+.+ ++. +.
T Consensus 61 ~~~~~-~D~~~-~----~~~~~-~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~ 132 (249)
T 1o5i_A 61 HRYVV-CDLRK-D----LDLLF-EKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GW 132 (249)
T ss_dssp SEEEE-CCTTT-C----HHHHH-HHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred CeEEE-eeHHH-H----HHHHH-HHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CC
Confidence 45667 99831 1 22222 3334899999999975431 346778999999988776654 333 56
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||..++... .....|+.|
T Consensus 133 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~s 156 (249)
T 1o5i_A 133 GRIVAITSFSVISPI--------------------------------------------------------ENLYTSNSA 156 (249)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred cEEEEEcchHhcCCC--------------------------------------------------------CCCchHHHH
Confidence 899999998876432 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHH-HHhcCCCceeecCCCceeecchHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFV-ASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~-~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
|+..+.+.+.. ..+++++++||+.|.++.... +.+ .... .+.... ....++.++|+
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~------~~~~~~~~~~~---------p~~~~~~~~dv 218 (249)
T 1o5i_A 157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLS------EEKKKQVESQI---------PMRRMAKPEEI 218 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSC------HHHHHHHHTTS---------TTSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc---cch------hhHHHHHHhcC---------CCCCCcCHHHH
Confidence 99999887654 358999999999998864211 000 1111 111111 11346889999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++.... ....+++|++.++
T Consensus 219 A~~i~~l~s~~~-~~~tG~~~~vdgG 243 (249)
T 1o5i_A 219 ASVVAFLCSEKA-SYLTGQTIVVDGG 243 (249)
T ss_dssp HHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHcCccc-cCCCCCEEEECCC
Confidence 999998876432 2234789999876
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-16 Score=155.15 Aligned_cols=221 Identities=14% Similarity=0.126 Sum_probs=143.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|+++|.. |+++.|..... .+...+++ ++ . ..++.+
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~--~~~~~~~~---------~~-~--------~~~~~~ 62 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGAN---VVLTYNGAAEG--AATAVAEI---------EK-L--------GRSALA 62 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECSSCHH--HHHHHHHH---------HT-T--------TSCCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHHH--HHHHHHHH---------Hh-c--------CCceEE
Confidence 58999999999999999999999999964 45554543321 11111111 11 1 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
+.+|+++ .+..+.+++ .+|++||+||... + .+.++..+++|+.|+.++++++... ..
T Consensus 63 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (259)
T 3edm_A 63 IKADLTN-------AAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK 135 (259)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999995 333344443 7999999998651 1 1346778999999999999998764 22
Q ss_pred ceEEEEEeccccc-CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 154 LKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 154 lk~fV~vSTa~v~-~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
-.++|++||...+ ... .....|+
T Consensus 136 ~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~~Y~ 159 (259)
T 3edm_A 136 GGAIVTFSSQAGRDGGG--------------------------------------------------------PGALAYA 159 (259)
T ss_dssp EEEEEEECCHHHHHCCS--------------------------------------------------------TTCHHHH
T ss_pred CCEEEEEcCHHhccCCC--------------------------------------------------------CCcHHHH
Confidence 2489999998765 211 1235799
Q ss_pred HHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 233 FTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 233 ~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
.||+..+.+.+.. ..++.+..+.|+.|.++....... .... ...........+..++|+
T Consensus 160 asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--------~~~~---------~~~~~~~p~~r~~~pedv 222 (259)
T 3edm_A 160 TSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--------PEVR---------ERVAGATSLKREGSSEDV 222 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------------CCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--------hHHH---------HHHHhcCCCCCCcCHHHH
Confidence 9999999988754 445999999999997754321110 0000 011111223456789999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++..... .-.|+++++.++
T Consensus 223 a~~v~~L~s~~~~-~itG~~i~vdGg 247 (259)
T 3edm_A 223 AGLVAFLASDDAA-YVTGACYDINGG 247 (259)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESBC
T ss_pred HHHHHHHcCcccc-CccCCEEEECCC
Confidence 9999988864332 234889999887
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.72 E-value=5e-16 Score=154.17 Aligned_cols=225 Identities=14% Similarity=0.131 Sum_probs=148.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.|. +|+++.|+..... .+.+.+++ +.. ..++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~-~~~~~~~~---------~~~---------~~~~~~~~ 59 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF---DIAVADLPQQEEQ-AAETIKLI---------EAA---------DQKAVFVG 59 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC---EEEEEECGGGHHH-HHHHHHHH---------HTT---------TCCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcchHH-HHHHHHHH---------Hhc---------CCcEEEEE
Confidence 68999999999999999999999996 4577888653210 11111111 110 24688999
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .+.
T Consensus 60 ~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 132 (258)
T 3a28_C 60 LDVTD-------KANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGV 132 (258)
T ss_dssp CCTTC-------HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Confidence 99995 333334443 799999999975431 346778999999999999988653 245
Q ss_pred -eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 155 -KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 155 -k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.++|++||...+... .....|+.
T Consensus 133 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 156 (258)
T 3a28_C 133 KGKIINAASIAAIQGF--------------------------------------------------------PILSAYST 156 (258)
T ss_dssp CCEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECcchhccCC--------------------------------------------------------CCchhHHH
Confidence 799999998765321 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccc---cch--HHHHHHHhcCCCceeecCCCceeecc
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDL---KTI--NALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~---~~~--~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
||+..|.+.+.. ..++.+.+++|+.|.++.... +.... .+. ......+... .....+.
T Consensus 157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~ 224 (258)
T 3a28_C 157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ---IDAELSKINGKPIGENFKEYSSS---------IALGRPS 224 (258)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH---HHHHHHHHHCCCTTHHHHHHHTT---------CTTSSCB
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh---hhhhhccccCCchHHHHHHHHhc---------CCCCCcc
Confidence 999999988764 458999999999987642110 00000 000 0111111111 0112367
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++..... .-.++++++.++
T Consensus 225 ~p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 254 (258)
T 3a28_C 225 VPEDVAGLVSFLASENSN-YVTGQVMLVDGG 254 (258)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred CHHHHHHHHHHHhCcccC-CCCCCEEEECCC
Confidence 899999999988864322 234789998876
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=158.07 Aligned_cols=215 Identities=14% Similarity=0.175 Sum_probs=145.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+.... .....
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~~--------------------------------~~~~~ 70 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGA---RVAVADRAVAGI--------------------------------AADLH 70 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEECSSCCTTS--------------------------------CCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH--------------------------------Hhhhc
Confidence 5789999999999999999999999996 456777754321 12234
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 71 ~~~Dv~~-------~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 143 (266)
T 3uxy_A 71 LPGDLRE-------AAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA 143 (266)
T ss_dssp CCCCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 5788884 33333333 379999999998653 2346778899999999999988421 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 144 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 167 (266)
T 3uxy_A 144 GGGAIVNVASCWGLRPG--------------------------------------------------------PGHALYC 167 (266)
T ss_dssp TCEEEEEECCSBTTBCC--------------------------------------------------------TTBHHHH
T ss_pred CCcEEEEECCHHhCCCC--------------------------------------------------------CCChHHH
Confidence 46799999998765321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++.+.+++|+.|.++..... +.............+..+ .....+..++|
T Consensus 168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~---------~p~~r~~~ped 236 (266)
T 3uxy_A 168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG--FAKRGFDPDRAVAELGRT---------VPLGRIAEPED 236 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH--HHHTTCCHHHHHHHHHTT---------STTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh--hhcccccchHHHHHHHhc---------CCCCCCcCHHH
Confidence 9999999988764 3589999999999987532100 000000011111222221 12345678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... --.|+++++.+|
T Consensus 237 vA~~v~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 3uxy_A 237 IADVVLFLASDAAR-YLCGSLVEVNGG 262 (266)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCEEEECcC
Confidence 99999988864332 234789999887
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-16 Score=156.99 Aligned_cols=220 Identities=18% Similarity=0.179 Sum_probs=148.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|+||||||+|+||++++++|+++|..| +++ .|+... .+.+.+++ ++ ...++.+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~v---v~~~~r~~~~---~~~~~~~~---------~~---------~~~~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNI---VINYARSKKA---ALETAEEI---------EK---------LGVKVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEE---EEEESSCHHH---HHHHHHHH---------HT---------TTCCEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEE---EEEcCCCHHH---HHHHHHHH---------Hh---------cCCcEEE
Confidence 68999999999999999999999999654 454 454321 12222111 11 0257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~ 131 (258)
T 3oid_A 59 VKANVGQ-------PAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN 131 (258)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 333344443 579999999964321 346778999999999999988542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (258)
T 3oid_A 132 GGGHIVSISSLGSIRYL--------------------------------------------------------ENYTTVG 155 (258)
T ss_dssp TCEEEEEEEEGGGTSBC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEECchhhCCCC--------------------------------------------------------CCcHHHH
Confidence 45689999998765321 1246899
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..++|+.|.++.....+ ...........+. ....+..++|
T Consensus 156 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---------p~~r~~~~~d 219 (258)
T 3oid_A 156 VSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP-------NREDLLEDARQNT---------PAGRMVEIKD 219 (258)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT-------THHHHHHHHHHHC---------TTSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc-------cCHHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999988764 34799999999999876432211 1111222221111 1234678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... .--.|+++++.+|
T Consensus 220 va~~v~~L~s~~~-~~itG~~i~vdGG 245 (258)
T 3oid_A 220 MVDTVEFLVSSKA-DMIRGQTIIVDGG 245 (258)
T ss_dssp HHHHHHHHTSSTT-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCccc-CCccCCEEEECCC
Confidence 9999998875332 2234889999887
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-16 Score=158.07 Aligned_cols=221 Identities=11% Similarity=0.083 Sum_probs=148.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+.. ++. ++ . + ..++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~------~~~-~~---------~-~---------~~~~~~ 54 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGA---KVIATDINES------KLQ-EL---------E-K---------YPGIQT 54 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHG-GG---------G-G---------STTEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH------HHH-HH---------H-h---------ccCceE
Confidence 5789999999999999999999999995 4577787531 111 00 0 0 136889
Q ss_pred EEccCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceE
Q 008315 90 VAGDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~ 156 (570)
+.+|+++ .+..+.+ +..+|+|||+||..... +.++..+++|+.|+.++++++... .+..+
T Consensus 55 ~~~D~~~-------~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~ 127 (246)
T 2ag5_A 55 RVLDVTK-------KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (246)
T ss_dssp EECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEeeCCC-------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 9999995 3323344 35799999999976432 346778999999999999987542 25689
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+.... .....|+.||+
T Consensus 128 iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~~sK~ 152 (246)
T 2ag5_A 128 IINMSSVASSVKGV-------------------------------------------------------VNRCVYSTTKA 152 (246)
T ss_dssp EEEECCSBTTTBCC-------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEEechHhCcCCC-------------------------------------------------------CCCccHHHHHH
Confidence 99999976543210 02357999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..|.+++.. ..+++++++||+.|.++.... +...-.........+.... + ...++..+|+|++
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~dvA~~ 220 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKRQ----K-----TGRFATAEEIAML 220 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHTC----T-----TSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh---hhhcccCcHHHHHHHHhcC----C-----CCCCCCHHHHHHH
Confidence 999988765 348999999999998863211 0000000111111111111 1 1236789999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++..... .-.++++++.++
T Consensus 221 v~~l~s~~~~-~~tG~~i~vdgG 242 (246)
T 2ag5_A 221 CVYLASDESA-YVTGNPVIIDGG 242 (246)
T ss_dssp HHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHhCcccc-CCCCCEEEECCC
Confidence 9988754322 234788998776
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.9e-16 Score=157.68 Aligned_cols=220 Identities=11% Similarity=0.103 Sum_probs=151.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+.... +.+.+++ +. . ..++.+
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~---~~~~~~~---------~~-~--------~~~~~~ 85 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA---QVAVAARHSDAL---QVVADEI---------AG-V--------GGKALP 85 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESSGGGG---HHHHHHH---------HH-T--------TCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHHH---------Hh-c--------CCeEEE
Confidence 5899999999999999999999999996 467888865432 2222122 11 0 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++... .
T Consensus 86 ~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 158 (276)
T 3r1i_A 86 IRCDVTQ-------PDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQ 158 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999995 333345544 799999999986432 346777899999999999988653 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+.... + .....|
T Consensus 159 ~~~g~iv~isS~~~~~~~~------------~------------------------------------------~~~~~Y 184 (276)
T 3r1i_A 159 GLGGTIITTASMSGHIINI------------P------------------------------------------QQVSHY 184 (276)
T ss_dssp TSCEEEEEECCGGGTSCCC------------S------------------------------------------SCCHHH
T ss_pred CCCcEEEEECchHhcccCC------------C------------------------------------------CCcchH
Confidence 2 26799999987543210 0 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..++|+.|.++..++.+.+ ...+.... ....+...+
T Consensus 185 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~----------~~~~~~~~---------p~~r~~~pe 245 (276)
T 3r1i_A 185 CTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY----------HALWEPKI---------PLGRMGRPE 245 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG----------HHHHGGGS---------TTSSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH----------HHHHHhcC---------CCCCCcCHH
Confidence 99999999988764 3589999999999987654332211 11111111 112356789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... --.|+++++.+|
T Consensus 246 dvA~~v~fL~s~~~~-~itG~~i~vdGG 272 (276)
T 3r1i_A 246 ELTGLYLYLASAASS-YMTGSDIVIDGG 272 (276)
T ss_dssp GSHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCcccc-CccCcEEEECcC
Confidence 999999988864332 234789999876
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-16 Score=154.71 Aligned_cols=221 Identities=14% Similarity=0.161 Sum_probs=149.7
Q ss_pred CCccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
|.+++-...++||+|+||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +.+..
T Consensus 1 M~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~----- 60 (252)
T 3f1l_A 1 MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGA---TVILLGRNEEK---LRQVASH---------INEET----- 60 (252)
T ss_dssp CCCCCCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHH-----
T ss_pred CCcCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhhc-----
Confidence 5555556678999999999999999999999999996 45778876422 1122111 11111
Q ss_pred ccccCceEEEEccC--CCCCCCCChhhhHHHHhC-------CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHH
Q 008315 81 SFISEKITFVAGDI--SSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK----FD----ERYDVAFGINTLGAIH 143 (570)
Q Consensus 81 ~~~~~kv~~v~gDl--~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ 143 (570)
..++.++.+|+ ++ .+..+.+++ .+|++||+||... +. +.++..+++|+.|+..
T Consensus 61 ---~~~~~~~~~D~~~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 130 (252)
T 3f1l_A 61 ---GRQPQWFILDLLTCT-------SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFM 130 (252)
T ss_dssp ---SCCCEEEECCTTTCC-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHH
T ss_pred ---CCCceEEEEecccCC-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHH
Confidence 13678899999 63 332334433 6999999999742 11 3467789999999999
Q ss_pred HHHHHHHc---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccc
Q 008315 144 LVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 144 ll~~a~~~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
+++++... .+..++|++||...+...
T Consensus 131 ~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 159 (252)
T 3f1l_A 131 LTQALLPLLLKSDAGSLVFTSSSVGRQGR--------------------------------------------------- 159 (252)
T ss_dssp HHHHHHHHHHTSSSCEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCEEEEECChhhccCC---------------------------------------------------
Confidence 99988432 245789999998754321
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCC
Q 008315 221 RAKIHGWPNTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
.....|+.||+..+.+.+.. ...+.+..+.|+.|..+.. ......
T Consensus 160 -----~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~-----------------~~~~~~--------- 208 (252)
T 3f1l_A 160 -----ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR-----------------ASAFPT--------- 208 (252)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH-----------------HHHCTT---------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh-----------------hhhCCc---------
Confidence 12357999999999887764 3348899999988755321 111000
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.....+...+|+|++++.++..... .-.|+++++.+|
T Consensus 209 ~~~~~~~~p~dva~~~~~L~s~~~~-~itG~~i~vdgG 245 (252)
T 3f1l_A 209 EDPQKLKTPADIMPLYLWLMGDDSR-RKTGMTFDAQPG 245 (252)
T ss_dssp CCGGGSBCTGGGHHHHHHHHSGGGT-TCCSCEEESSCC
T ss_pred cchhccCCHHHHHHHHHHHcCcccc-CCCCCEEEeCCC
Confidence 1112356778999999988864432 234889999887
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.7e-16 Score=153.02 Aligned_cols=222 Identities=13% Similarity=0.112 Sum_probs=151.2
Q ss_pred cCCCEEEEECCccH--hHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTGF--VAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGF--lG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+|+ ||++++++|++.|.. |+++.|+.+.....+.+ .++.+ ..++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~---V~~~~r~~~~~~~~~~~-------------~~~~~-------~~~~ 61 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGAR---LIFTYAGERLEKSVHEL-------------AGTLD-------RNDS 61 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCE---EEEEESSGGGHHHHHHH-------------HHTSS-------SCCC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEecCchHHHHHHHHH-------------HHhcC-------CCCc
Confidence 58999999999999 999999999999964 57777764332222111 11111 1378
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC-------c----ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK-------F----DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ +..+.+++ .+|++||+||... + .+.+...+++|+.|+.++++++.
T Consensus 62 ~~~~~D~~~~-------~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 134 (266)
T 3oig_A 62 IILPCDVTND-------AEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR 134 (266)
T ss_dssp EEEECCCSSS-------HHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred eEEeCCCCCH-------HHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999963 22334433 6899999999754 1 13456778999999999999987
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|++||....... ...
T Consensus 135 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 158 (266)
T 3oig_A 135 PMMTEGGSIVTLTYLGGELVM--------------------------------------------------------PNY 158 (266)
T ss_dssp GGCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred hhcCCCceEEEEecccccccC--------------------------------------------------------CCc
Confidence 64 233589999998765321 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..++|+.|.++.....+. .......+.... ....+.
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~---------~~~~~~ 222 (266)
T 3oig_A 159 NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-------FNSILKDIEERA---------PLRRTT 222 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-------HHHHHHHHHHHS---------TTSSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-------hHHHHHHHHhcC---------CCCCCC
Confidence 57999999999988754 447999999999998764432211 112222221111 112356
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++..... ...++++++.+|
T Consensus 223 ~p~dva~~v~~l~s~~~~-~~tG~~i~vdGG 252 (266)
T 3oig_A 223 TPEEVGDTAAFLFSDMSR-GITGENLHVDSG 252 (266)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCchh-cCcCCEEEECCC
Confidence 789999999998864332 234889999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-16 Score=159.33 Aligned_cols=221 Identities=11% Similarity=0.136 Sum_probs=139.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|.. |+++.|.... ..+.+.+++ +.. ..++.+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~--~~~~~~~~~---------~~~---------~~~~~~ 83 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFD---IAITGIGDAE--GVAPVIAEL---------SGL---------GARVIF 83 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCCHH--HHHHHHHHH---------HHT---------TCCEEE
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCe---EEEEeCCCHH--HHHHHHHHH---------Hhc---------CCcEEE
Confidence 57899999999999999999999999964 5677653321 112222111 110 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC-----c----ccCHHHHHHHHHHHHHHHHHHHHHc-c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK-----F----DERYDVAFGINTLGAIHLVNFAKKC-V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~-----f----~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (570)
+.+|++++ +..+.+++ .+|++||+||... + .+.++..+++|+.|+.++++++... .
T Consensus 84 ~~~Dv~d~-------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 156 (280)
T 4da9_A 84 LRADLADL-------SSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAML 156 (280)
T ss_dssp EECCTTSG-------GGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 99999953 32334443 7999999999732 1 2446777899999999999987653 1
Q ss_pred --C---ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 153 --K---LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 153 --~---lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
+ -.++|++||....... ..
T Consensus 157 ~~~~~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~ 180 (280)
T 4da9_A 157 ASDARASRSIINITSVSAVMTS--------------------------------------------------------PE 180 (280)
T ss_dssp HHCCCCCEEEEEECCC---------------------------------------------------------------C
T ss_pred HhCCCCCCEEEEEcchhhccCC--------------------------------------------------------CC
Confidence 1 4589999997764221 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++.+..++|+.|.++........ ....... .......+
T Consensus 181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~--------~~~p~~r~ 243 (280)
T 4da9_A 181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK---------YDGLIES--------GLVPMRRW 243 (280)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------CC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh---------HHHHHhh--------cCCCcCCc
Confidence 357999999999988764 3579999999999987644221110 0000000 01122346
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..++|+|++++.++..... --.|+++++.+|
T Consensus 244 ~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 274 (280)
T 4da9_A 244 GEPEDIGNIVAGLAGGQFG-FATGSVIQADGG 274 (280)
T ss_dssp BCHHHHHHHHHHHHTSTTG-GGTTCEEEESTT
T ss_pred CCHHHHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 7889999999988753221 124789999887
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-16 Score=158.66 Aligned_cols=240 Identities=13% Similarity=0.152 Sum_probs=154.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|. +|+++.|+... .+.+.++ +++..+ ...++.+
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~~------~~~~~~~ 82 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNEDR---LEETKQQ---------ILKAGV------PAEKINA 82 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHTTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhcCC------CCceEEE
Confidence 5789999999999999999999999996 45788886421 1121111 111100 0126889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-----c----cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-----D----ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-----~----~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... . +.++..+++|+.|+.++++++...
T Consensus 83 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 155 (297)
T 1xhl_A 83 VVADVTE-------ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 155 (297)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EecCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 9999995 333334443 79999999996532 1 346778999999999999988653
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+ .++|++||...+.... .....
T Consensus 156 ~~~-g~IV~isS~~~~~~~~-------------------------------------------------------~~~~~ 179 (297)
T 1xhl_A 156 KTK-GEIVNVSSIVAGPQAH-------------------------------------------------------SGYPY 179 (297)
T ss_dssp HTT-CEEEEECCGGGSSSCC-------------------------------------------------------TTSHH
T ss_pred hcC-CEEEEEcCchhccCCC-------------------------------------------------------CCcch
Confidence 23 6999999987653210 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccccc-chHHHHHHHhcCCCceeecCCCceeecch
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
|+.||+..|.+.+.. ..++++++++|+.|.++....... .+... ........+... . ....+..
T Consensus 180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~----~-----p~~r~~~ 249 (297)
T 1xhl_A 180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL-PETASDKLYSFIGSRKEC----I-----PVGHCGK 249 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTC-CHHHHHHHHHHHHHCTTT----C-----TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccc-ccccccchHHHHHHHHhc----C-----CCCCCcC
Confidence 999999999988764 458999999999998753211000 00000 000111111111 1 1124788
Q ss_pred HHHHHHHHHHHHHHh-cCCCCCCceEEeccCCCCcccHHhHHH
Q 008315 305 VDMVVNAMIVAMVAH-AKQPSDANIYHVGSSLRNPVTLVSILD 346 (570)
Q Consensus 305 VDdva~aii~a~~~~-~~~~~~~~iyn~~s~~~~~it~~el~~ 346 (570)
.+|+|++++.++... .. .-.++++++.++ ..+...+...
T Consensus 250 pedvA~~v~~l~s~~~~~-~itG~~i~vdGG--~~~~~~~~~~ 289 (297)
T 1xhl_A 250 PEEIANIIVFLADRNLSS-YIIGQSIVADGG--STLVMGMQTH 289 (297)
T ss_dssp HHHHHHHHHHHHCHHHHT-TCCSCEEEESTT--GGGCCGGGGS
T ss_pred HHHHHHHHHHHhCCcccC-CccCcEEEECCC--cccccccccc
Confidence 999999999888643 22 224789999887 4555555433
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4e-16 Score=157.14 Aligned_cols=232 Identities=13% Similarity=0.122 Sum_probs=150.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|+++|. +|+++.|+.... .+.+.+++ ++. ..++.+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~--~~~~~~~~---------~~~---------~~~~~~ 83 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC---KVIVNYANSTES--AEEVVAAI---------KKN---------GSDAAC 83 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCHHH--HHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCchHH--HHHHHHHH---------HHh---------CCCeEE
Confidence 5799999999999999999999999996 457778864321 11111111 110 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 84 ~~~D~~~-------~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 156 (283)
T 1g0o_A 84 VKANVGV-------VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG 156 (283)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC
Confidence 9999995 33223333 379999999997643 2446778999999999999998764 345
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||........ .....|+.|
T Consensus 157 g~iv~isS~~~~~~~~-------------------------------------------------------~~~~~Y~as 181 (283)
T 1g0o_A 157 GRLILMGSITGQAKAV-------------------------------------------------------PKHAVYSGS 181 (283)
T ss_dssp CEEEEECCGGGTCSSC-------------------------------------------------------SSCHHHHHH
T ss_pred CeEEEEechhhccCCC-------------------------------------------------------CCCcchHHH
Confidence 7999999976542210 113579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCccccc-cchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWVEDL-KTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
|+..|.+.+.. ..++.+.+++|+.|.++..... ..+.... .........+..+. ......+...+|
T Consensus 182 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~p~d 254 (283)
T 1g0o_A 182 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRRVGLPID 254 (283)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCCCcCHHH
Confidence 99999988754 3589999999999987532110 0000000 00011111111100 001123678899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.|+++++.+|
T Consensus 255 vA~~v~~l~s~~~~-~itG~~i~vdgG 280 (283)
T 1g0o_A 255 IARVVCFLASNDGG-WVTGKVIGIDGG 280 (283)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CcCCCEEEeCCC
Confidence 99999988864332 234788988776
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=158.51 Aligned_cols=238 Identities=14% Similarity=0.125 Sum_probs=144.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHH-hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILR-VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~-~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|+|+|||||||||++++++|++ .|. +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 58 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG---DVVLTARDVTR---GQAAVQQ---------LQAE---------GLSPRF 58 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS---EEEEEESSHHH---HHHHHHH---------HHHT---------TCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC---eEEEEeCChHH---HHHHHHH---------HHhc---------CCeeEE
Confidence 689999999999999999999999 785 46788886321 1111111 1111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|+++ .+..+.+++ ++|+|||+||.... .+.++..+++|+.|+.++++++... .+.
T Consensus 59 ~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 131 (276)
T 1wma_A 59 HQLDIDD-------LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ 131 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC
Confidence 9999995 333345544 79999999997532 2446778999999999999999774 223
Q ss_pred eEEEEEecccccCCCCC--e-eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 155 KVFVHVSTAYVAGERTG--L-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g--~-i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.++|++||..++....+ . ..+. +.. .+++.+.............. .+... ..+.+.+.|
T Consensus 132 g~iv~~sS~~~~~~~~~~~~~~~~~-~~~-~~~~e~~~~~~~~~~~~~~~---------------~~~~~-~~~~~~~~Y 193 (276)
T 1wma_A 132 GRVVNVSSIMSVRALKSCSPELQQK-FRS-ETITEEELVGLMNKFVEDTK---------------KGVHQ-KEGWPSSAY 193 (276)
T ss_dssp EEEEEECCHHHHHHHHTSCHHHHHH-HHC-SSCCHHHHHHHHHHHHHHHH---------------TTCTT-TTTCCSCHH
T ss_pred CEEEEECChhhhcccccCChhHHhh-ccc-cccchhhhhhhhhhhhhhhc---------------ccccc-cCCCccchh
Confidence 58999999876532100 0 0000 000 01111111111000000000 00000 001123789
Q ss_pred HHHHHHHHHHHHHh-----c----CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 232 VFTKTMGEMIMQQS-----K----ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~----~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
+.||+..|.+++.+ . .++.+++++|+.|.++.... ..+
T Consensus 194 ~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---------------------------------~~~ 240 (276)
T 1wma_A 194 GVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---------------------------------KAT 240 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---------------------------------TCS
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---------------------------------ccc
Confidence 99999999888754 2 58999999999987643210 125
Q ss_pred chHHHHHHHHHHHHHHhc-CCCCCCceEE
Q 008315 303 IPVDMVVNAMIVAMVAHA-KQPSDANIYH 330 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~-~~~~~~~iyn 330 (570)
+..+++|++++.++.... .....|..++
T Consensus 241 ~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 241 KSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp BCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred CChhHhhhhHhhhhcCcccccccCceEec
Confidence 789999999998885331 1122355554
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-16 Score=157.54 Aligned_cols=221 Identities=14% Similarity=0.115 Sum_probs=149.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+... .+.+.+++ ++. ..++.+
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~l---------~~~---------~~~~~~ 79 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA---RILINGTDPSR---VAQTVQEF---------RNV---------GHDAEA 79 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEECCSCHHH---HHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hhc---------CCceEE
Confidence 5899999999999999999999999996 45666664321 12222111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 80 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 152 (271)
T 4ibo_A 80 VAFDVTS-------ESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR 152 (271)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 333345544 69999999997532 1346778999999999998887553 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 153 ~~g~iV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 176 (271)
T 4ibo_A 153 GYGKIVNIGSLTSELAR--------------------------------------------------------ATVAPYT 176 (271)
T ss_dssp TCEEEEEECCGGGTSBC--------------------------------------------------------TTCHHHH
T ss_pred CCcEEEEEccHHhCCCC--------------------------------------------------------CCchhHH
Confidence 44689999997654221 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+++.. ..++.+..++|+.|.++..... .+ .......+..+. ....+..++|
T Consensus 177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~----~~~~~~~~~~~~---------p~~r~~~ped 240 (271)
T 4ibo_A 177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL---ID----NPEFDAWVKART---------PAKRWGKPQE 240 (271)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---HH----CHHHHHHHHHHS---------TTCSCBCGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc---cc----CHHHHHHHHhcC---------CCCCCcCHHH
Confidence 9999999988764 4589999999999987543110 00 011111111111 1123567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... --.|+++++.+|
T Consensus 241 va~~v~~L~s~~~~-~itG~~i~vdGG 266 (271)
T 4ibo_A 241 LVGTAVFLSASASD-YVNGQIIYVDGG 266 (271)
T ss_dssp GHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCcccc-CCCCcEEEECCC
Confidence 99999988764332 234889999887
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-16 Score=156.78 Aligned_cols=246 Identities=16% Similarity=0.163 Sum_probs=154.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES------AALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+..... ..+++. +.. ..++. .
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~---------~ 69 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA---DIILFDICHDIETNEYPLATSRDLE-EAG-----LEVEK---------T 69 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECCSCCTTSCSCCCCHHHHH-HHH-----HHHHH---------T
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---eEEEEcccccccccccchhhhHHHH-HHH-----HHHHh---------c
Confidence 5899999999999999999999999996 4577777632211 011221 110 01111 1
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-----ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-----DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-----~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 70 ~~~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 142 (287)
T 3pxx_A 70 GRKAYTAEVDVRD-------RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPY 142 (287)
T ss_dssp TSCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CCceEEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 2578999999995 333334443 79999999998643 2457788999999999999998764
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|++||...+.... ..+..+..+. .....
T Consensus 143 ~~~~g~iv~isS~~~~~~~~----~~~~~~~~~~-----------------------------------------~~~~~ 177 (287)
T 3pxx_A 143 LTSGASIITTGSVAGLIAAA----QPPGAGGPQG-----------------------------------------PGGAG 177 (287)
T ss_dssp CCTTCEEEEECCHHHHHHHH----CCC-----CH-----------------------------------------HHHHH
T ss_pred hhcCcEEEEeccchhccccc----ccccccccCC-----------------------------------------Cccch
Confidence 3345899999987653211 0000000000 11357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCc---cccc--cchHHHHHHHhcCCCceeecCCCcee
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGW---VEDL--KTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw---~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..+.+.+.. ..++.+..++|+.|.++.....+.+ .... .......... ........
T Consensus 178 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 249 (287)
T 3pxx_A 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF--------PAMQAMPT 249 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG--------GGGCSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh--------hhhcccCC
Confidence 999999999988764 3489999999999988654321100 0000 0000000000 00011114
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+..++|+|++++.++..... --.|+++++.+|
T Consensus 250 ~~~~p~dva~~v~fL~s~~a~-~itG~~i~vdGG 282 (287)
T 3pxx_A 250 PYVEASDISNAVCFLASDESR-YVTGLQFKVDAG 282 (287)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCCCHHHHHhhHheecchhhc-CCCCceEeECch
Confidence 678999999999988864332 234889999887
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=7.9e-16 Score=155.90 Aligned_cols=221 Identities=12% Similarity=0.109 Sum_probs=149.3
Q ss_pred hcCCCEEEEECCccH--hHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVTGF--VAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTGF--lG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
-++||+|+||||+|+ ||++++++|++.|.. |+++.|+... .+.+. + +.++ ..+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~---V~~~~r~~~~---~~~~~-~---------~~~~---------~~~ 82 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAE---LAFTYQGDAL---KKRVE-P---------LAEE---------LGA 82 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE---EEEEECSHHH---HHHHH-H---------HHHH---------HTC
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE---EEEEcCCHHH---HHHHH-H---------HHHh---------cCC
Confidence 368999999999999 999999999999964 5677776321 12222 1 1111 145
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC-------c----ccCHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK-------F----DERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~-------f----~~~~~~~~~~Nv~gt~~ll~~a 148 (570)
+.++.+|+++ .+..+.+++ .+|++||+||... + .+.++..+++|+.|+..+++++
T Consensus 83 ~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 155 (293)
T 3grk_A 83 FVAGHCDVAD-------AASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRA 155 (293)
T ss_dssp EEEEECCTTC-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ceEEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999995 333344443 6899999999764 1 1346778999999999999998
Q ss_pred HHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
... .+-.++|++||....... ..
T Consensus 156 ~~~m~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~ 179 (293)
T 3grk_A 156 EKLMADGGSILTLTYYGAEKVM--------------------------------------------------------PN 179 (293)
T ss_dssp HHHTTTCEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred HHhccCCCEEEEEeehhhccCC--------------------------------------------------------Cc
Confidence 763 334689999998765321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.||+..+.+.+.. ..++.+..++|+.|.++...... ............. ....+
T Consensus 180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---------p~~r~ 243 (293)
T 3grk_A 180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG-------DFRYILKWNEYNA---------PLRRT 243 (293)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C-------CHHHHHHHHHHHS---------TTSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc-------chHHHHHHHHhcC---------CCCCC
Confidence 467999999999988764 45899999999999876432211 1111111111111 11235
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...+|+|++++.++..... --.|+++++.+|
T Consensus 244 ~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 274 (293)
T 3grk_A 244 VTIDEVGDVGLYFLSDLSR-SVTGEVHHADSG 274 (293)
T ss_dssp CCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcCcccc-CCcceEEEECCC
Confidence 6789999999988864332 234889999887
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-16 Score=154.04 Aligned_cols=202 Identities=10% Similarity=0.115 Sum_probs=141.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|+++|+ +|+++.|+.... .....+
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~-------------------------------~~~~~~ 46 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQ-------------------------------ADSNIL 46 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTT-------------------------------SSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEecCcccc-------------------------------ccccEE
Confidence 3689999999999999999999999985 567888875431 123567
Q ss_pred EEccCCCCCCCCChhhhHHHHh---------CCccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW---------NELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---------~~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|+++ .+..+.++ .++|+|||+||.... .+.++..+++|+.|+.++++++...
T Consensus 47 ~~~D~~~-------~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 119 (236)
T 1ooe_A 47 VDGNKNW-------TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL 119 (236)
T ss_dssp CCTTSCH-------HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 7899994 44333443 379999999996531 1345777999999999999988763
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||...+... .....|
T Consensus 120 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 143 (236)
T 1ooe_A 120 KPGGLLQLTGAAAAMGPT--------------------------------------------------------PSMIGY 143 (236)
T ss_dssp EEEEEEEEECCGGGGSCC--------------------------------------------------------TTBHHH
T ss_pred ccCCEEEEECchhhccCC--------------------------------------------------------CCcHHH
Confidence 223589999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+++.. ..++.+++++|+.|.++... ..... ......+|
T Consensus 144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------------~~~~~---------~~~~~~~~ 197 (236)
T 1ooe_A 144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------------KWMPN---------ADHSSWTP 197 (236)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------------HHSTT---------CCGGGCBC
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------------hcCCC---------ccccccCC
Confidence 99999999998765 23589999999988764210 00000 01124578
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++..+.......-.++++++.++
T Consensus 198 ~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg 227 (236)
T 1ooe_A 198 LSFISEHLLKWTTETSSRPSSGALLKITTE 227 (236)
T ss_dssp HHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccccccEEEEecC
Confidence 899999998666433333334778888765
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.1e-16 Score=156.79 Aligned_cols=230 Identities=12% Similarity=0.091 Sum_probs=148.1
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..+++|+||||||+|+||++++++|+++|. +|+++.|+... .+.+.++ +++. ..++
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~ 75 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGI---AVYGCARDAKN---VSAAVDG---------LRAA---------GHDV 75 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTT---------TCCE
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcE
Confidence 345789999999999999999999999996 45778886322 1121111 1111 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH---
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK--- 150 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~--- 150 (570)
.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++..
T Consensus 76 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 148 (279)
T 3sju_A 76 DGSSCDVTS-------TDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGG 148 (279)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSS
T ss_pred EEEECCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhh
Confidence 999999995 333334433 689999999976421 34677889999999999998865
Q ss_pred c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 151 ~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ .+..++|++||....... ...
T Consensus 149 ~~~~~~g~iV~isS~~~~~~~--------------------------------------------------------~~~ 172 (279)
T 3sju_A 149 MREAGWGRIVNIASTGGKQGV--------------------------------------------------------MYA 172 (279)
T ss_dssp HHHHTCEEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HhhcCCcEEEEECChhhccCC--------------------------------------------------------CCC
Confidence 2 245799999998765321 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-Ccccccc-chHHHHHHHhcCCCceeecCCCceee
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVEDLK-TINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
..|+.||+..+.+.+.. ..++.+..++|+.|.++...... .+..... ........+... .....
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r 243 (279)
T 3sju_A 173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAK---------IPLGR 243 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTT---------CTTSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhc---------CCCCC
Confidence 57999999888887654 35799999999999775321100 0000000 011222222221 12234
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..++|+|++++.++..... --.|+++++.+|
T Consensus 244 ~~~pedvA~~v~~L~s~~a~-~itG~~i~vdGG 275 (279)
T 3sju_A 244 YSTPEEVAGLVGYLVTDAAA-SITAQALNVCGG 275 (279)
T ss_dssp CBCHHHHHHHHHHHTSSGGG-GCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCcccc-CcCCcEEEECCC
Confidence 67899999999888753322 224789999887
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=8.7e-16 Score=152.27 Aligned_cols=223 Identities=14% Similarity=0.072 Sum_probs=145.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ ++.. ..++.++.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~~~ 57 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF---AVAIADYNDAT---AKAVASE---------INQA---------GGHAVAVK 57 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEEEE
Confidence 68999999999999999999999996 45788886421 1111111 1111 14688999
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---cC-
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---VK- 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~- 153 (570)
+|+++ .+..+.+++ ++|++||+||.... .+.++..+++|+.|+.++++.+... .+
T Consensus 58 ~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~ 130 (256)
T 1geg_A 58 VDVSD-------RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH 130 (256)
T ss_dssp CCTTS-------HHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred ecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 99995 333345544 79999999997542 1346678999999999998887652 13
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 131 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 154 (256)
T 1geg_A 131 GGKIINACSQAGHVGN--------------------------------------------------------PELAVYSS 154 (256)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CCEEEEECchhhcCCC--------------------------------------------------------CCchhHHH
Confidence 5799999997654221 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccc-----hHHHHHHHhcCCCceeecCCCceeecc
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKT-----INALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~-----~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
||+..|.+.+.. ..++.+++++|+.|.++.... ....+.. .......+... .....+.
T Consensus 155 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~ 222 (256)
T 1geg_A 155 SKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE---IDRQVSEAAGKPLGYGTAEFAKR---------ITLGRLS 222 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH---HHHHHHHHHTCCTTHHHHHHHTT---------CTTCSCB
T ss_pred HHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh---hhhhccccccCChHHHHHHHHhc---------CCCCCCc
Confidence 999999888764 358999999999997753210 0000000 00001111110 1112468
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++..... .-.++++++.+|
T Consensus 223 ~p~dvA~~v~~l~s~~~~-~~tG~~i~vdGG 252 (256)
T 1geg_A 223 EPEDVAACVSYLASPDSD-YMTGQSLLIDGG 252 (256)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred CHHHHHHHHHHHhCcccc-CCCCCEEEeCCC
Confidence 899999999988754322 224788998876
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-16 Score=155.87 Aligned_cols=220 Identities=10% Similarity=0.043 Sum_probs=146.3
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+.+|+|+||||+|+||++++++|+++|.. |+++.+.... ..+...++ +++. ..++.
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~---v~i~~~r~~~--~~~~~~~~---------l~~~---------~~~~~ 79 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFN---IGVHYHRDAA--GAQETLNA---------IVAN---------GGNGR 79 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHH---------HHHT---------TCCEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCchH--HHHHHHHH---------HHhc---------CCceE
Confidence 357899999999999999999999999964 4455543211 11111111 1111 25789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH----
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK---- 150 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~---- 150 (570)
++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++.+..
T Consensus 80 ~~~~Dl~~-------~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 152 (267)
T 4iiu_A 80 LLSFDVAN-------REQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIG 152 (267)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 99999995 333334443 799999999976421 34677899999999999998741
Q ss_pred ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 151 ~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
..+..++|++||...+... .....
T Consensus 153 ~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~ 176 (267)
T 4iiu_A 153 ARQGGRIITLSSVSGVMGN--------------------------------------------------------RGQVN 176 (267)
T ss_dssp HTSCEEEEEECCHHHHHCC--------------------------------------------------------TTCHH
T ss_pred cCCCcEEEEEcchHhccCC--------------------------------------------------------CCCch
Confidence 1255799999997654321 12467
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++++.+++|+.|.++..+.. ........... ....+..+
T Consensus 177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~---------p~~~~~~~ 237 (267)
T 4iiu_A 177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----------ESALKEAMSMI---------PMKRMGQA 237 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----------HHHHHHHHHTC---------TTCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----------HHHHHHHHhcC---------CCCCCcCH
Confidence 999999777766543 4589999999999987654221 11122222211 11245789
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... .-.|+++++.+|
T Consensus 238 edva~~~~~L~s~~~~-~itG~~i~vdGG 265 (267)
T 4iiu_A 238 EEVAGLASYLMSDIAG-YVTRQVISINGG 265 (267)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCCccc-CccCCEEEeCCC
Confidence 9999999988864332 234789999876
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.4e-16 Score=156.43 Aligned_cols=222 Identities=10% Similarity=0.092 Sum_probs=146.0
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|+||||+|+||++++++|++.|.. |+++.|.... ..+...+++ +. ...++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~--~~~~~~~~~---------~~---------~~~~~~ 78 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA---VAVSHSERND--HVSTWLMHE---------RD---------AGRDFK 78 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEECSCHH--HHHHHHHHH---------HT---------TTCCCE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCchH--HHHHHHHHH---------Hh---------cCCceE
Confidence 467899999999999999999999999964 4566543321 111111111 10 125789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++.+...
T Consensus 79 ~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~ 151 (269)
T 3gk3_A 79 AYAVDVAD-------FESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVE 151 (269)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 333334443 799999999976432 346778999999999999987542
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 152 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 175 (269)
T 3gk3_A 152 RRFGRIVNIGSVNGSRGA--------------------------------------------------------FGQANY 175 (269)
T ss_dssp HTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHHH
T ss_pred cCCCEEEEeCChhhccCC--------------------------------------------------------CCcchH
Confidence 245789999997654321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+++.. ..++++.+++|+.|.++.....+. ... .. ..........+..++
T Consensus 176 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------~~~----~~----~~~~~~~~~~~~~p~ 238 (269)
T 3gk3_A 176 ASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---------DVL----EA----KILPQIPVGRLGRPD 238 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------------C----CSGGGCTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---------hHH----HH----HhhhcCCcCCccCHH
Confidence 99999888877654 458999999999998765432111 000 00 000111223456799
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ..-.|+++++.+|
T Consensus 239 dvA~~v~~L~s~~~-~~itG~~i~vdgG 265 (269)
T 3gk3_A 239 EVAALIAFLCSDDA-GFVTGADLAINGG 265 (269)
T ss_dssp HHHHHHHHHTSTTC-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCCCc-CCeeCcEEEECCC
Confidence 99999988875332 2234889999887
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-15 Score=153.68 Aligned_cols=228 Identities=14% Similarity=0.093 Sum_probs=148.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+.+++.. ...++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~l~~------------------~~~~~~~ 81 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV---TVGALGRTRTE---VEEVADEIVG------------------AGGQAIA 81 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHHTT------------------TTCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHHHh------------------cCCcEEE
Confidence 4689999999999999999999999995 45777776422 2222212111 1257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.+++ .+|++||+||.... . +.++..+++|+.|+..+++++...
T Consensus 82 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 154 (283)
T 3v8b_A 82 LEADVSD-------ELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ 154 (283)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999995 333334443 79999999997532 1 346778999999999999988421
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||........ . .....|
T Consensus 155 ~~~g~Iv~isS~~~~~~~~-------~-----------------------------------------------~~~~~Y 180 (283)
T 3v8b_A 155 RGGGAIVVVSSINGTRTFT-------T-----------------------------------------------PGATAY 180 (283)
T ss_dssp HTCEEEEEECCSBTTTBCC-------S-----------------------------------------------TTCHHH
T ss_pred cCCceEEEEcChhhccCCC-------C-----------------------------------------------CCchHH
Confidence 2457999999976542110 0 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCce--eecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI--MDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~--~d~Vp 304 (570)
+.||+..+.+++.. ..++.+..++|+.|..+....... . ... .. ............. ..+..
T Consensus 181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~----~~~---~~--~~~~~~~~~~~p~~~~r~~~ 249 (283)
T 3v8b_A 181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKL--R----HEE---ET--AIPVEWPKGQVPITDGQPGR 249 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTB--C----CHH---HH--SCCCBCTTCSCGGGTTCCBC
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccc--c----cch---hh--hhhhhhhhhcCccccCCCCC
Confidence 99999999988765 357999999999998765432110 0 000 00 0000011111111 23567
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++..... --.|+++++.+|
T Consensus 250 pedvA~~v~fL~s~~a~-~itG~~i~vdGG 278 (283)
T 3v8b_A 250 SEDVAELIRFLVSERAR-HVTGSPVWIDGG 278 (283)
T ss_dssp HHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCcCCEEEECcC
Confidence 79999999988764332 234789998876
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-15 Score=149.18 Aligned_cols=211 Identities=17% Similarity=0.193 Sum_probs=142.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||+|+||++++++|+++|+. |+++.|+... .+.+.++ +.+.. ..++.++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~---V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~~~ 57 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYA---LALGARSVDR---LEKIAHE---------LMQEQ--------GVEVFYH 57 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHH---------HHHHH--------CCCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHHHH---------HHhhc--------CCeEEEE
Confidence 4789999999999999999999999964 5778886422 1111111 11111 2578999
Q ss_pred EccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cCc
Q 008315 91 AGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VKL 154 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~l 154 (570)
.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... .+-
T Consensus 58 ~~D~~~-------~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~ 130 (235)
T 3l77_A 58 HLDVSK-------AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTG 130 (235)
T ss_dssp ECCTTC-------HHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCC-------HHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999995 443445555 689999999976432 346778999999999999988653 123
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... .....|+.|
T Consensus 131 ~~ii~~sS~~~~~~~--------------------------------------------------------~~~~~Y~~s 154 (235)
T 3l77_A 131 GLALVTTSDVSARLI--------------------------------------------------------PYGGGYVST 154 (235)
T ss_dssp CEEEEECCGGGSSCC--------------------------------------------------------TTCHHHHHH
T ss_pred CcEEEEecchhcccC--------------------------------------------------------CCcchHHHH
Confidence 567777765543211 123579999
Q ss_pred HHHHHHHHHHh---cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 235 KTMGEMIMQQS---KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 235 K~~aE~~v~~~---~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
|+..+.+++.. ..++.+..++|+.|-.+.....++. .....++..+++|++
T Consensus 155 Kaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~~--------------------------~~~~~~~~p~dva~~ 208 (235)
T 3l77_A 155 KWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPGK--------------------------PKEKGYLKPDEIAEA 208 (235)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSCC--------------------------CGGGTCBCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCCc--------------------------ccccCCCCHHHHHHH
Confidence 99999998865 5689999999999876543221110 011146789999999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++...... ..+++.....+
T Consensus 209 v~~l~~~~~~~-~~~~~~~~~~~ 230 (235)
T 3l77_A 209 VRCLLKLPKDV-RVEELMLRSVY 230 (235)
T ss_dssp HHHHHTSCTTC-CCCEEEECCTT
T ss_pred HHHHHcCCCCC-ccceEEEeecc
Confidence 99988643321 22455544443
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.1e-16 Score=155.52 Aligned_cols=230 Identities=12% Similarity=0.138 Sum_probs=149.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|+++|+ +|+++.|+... .+.+.+++ +...+ ...++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~~~------~~~~~~~ 62 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSER---LEETRQII---------LKSGV------SEKQVNS 62 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HTTTC------CGGGEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------HHcCC------CCcceEE
Confidence 5789999999999999999999999996 45788886421 11111111 11100 0126889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------c----cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------D----ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~----~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... . +.++..+++|+.|+.++++++...
T Consensus 63 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 135 (280)
T 1xkq_A 63 VVADVTT-------EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135 (280)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999995 333334443 69999999997532 1 236778999999999999988653
Q ss_pred ---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 ---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+ .++|++||...+.... ...
T Consensus 136 ~~~~~-g~iv~isS~~~~~~~~-------------------------------------------------------~~~ 159 (280)
T 1xkq_A 136 LVASK-GEIVNVSSIVAGPQAQ-------------------------------------------------------PDF 159 (280)
T ss_dssp HHHHT-CEEEEECCGGGSSSCC-------------------------------------------------------CSS
T ss_pred hhcCC-CcEEEecCccccCCCC-------------------------------------------------------Ccc
Confidence 13 7999999987653210 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccccc-chHHHHHHHhcCCCceeecCCCceeec
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..|.+.+.. ..++++.+++|+.|.++.......+ .... ............ . ....+
T Consensus 160 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~----~-----p~~~~ 229 (280)
T 1xkq_A 160 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMP-DQASQKFYNFMASHKEC----I-----PIGAA 229 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCC-HHHHHHHHHHHHHCTTT----C-----TTSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccc-cccccchHHHHHHHHcC----C-----CCCCC
Confidence 57999999999988764 3589999999999987642111000 0000 000111111111 1 12347
Q ss_pred chHHHHHHHHHHHHHHh-cCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAH-AKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~-~~~~~~~~iyn~~s~ 334 (570)
..++|+|++++.++... .. ...++++++.++
T Consensus 230 ~~pedvA~~v~~l~s~~~~~-~~tG~~i~vdgG 261 (280)
T 1xkq_A 230 GKPEHIANIILFLADRNLSF-YILGQSIVADGG 261 (280)
T ss_dssp BCHHHHHHHHHHHHCHHHHT-TCCSCEEEESTT
T ss_pred CCHHHHHHHHHHhcCccccc-CccCCeEEECCC
Confidence 88999999999887543 22 224789999887
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.7e-16 Score=158.90 Aligned_cols=214 Identities=14% Similarity=0.093 Sum_probs=137.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||||+||++++++|+++|. +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 84 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA---RLVLSDVDQPA---LEQAVNG---------LRGQ---------GFDAHG 84 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 5789999999999999999999999995 46788886422 1121111 1111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 85 ~~~Dv~d-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~ 157 (301)
T 3tjr_A 85 VVCDVRH-------LDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQ 157 (301)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333344443 79999999997632 1346778999999999999987542 1
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -.++|++||...+... .....|
T Consensus 158 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 181 (301)
T 3tjr_A 158 GTGGHIAFTASFAGLVPN--------------------------------------------------------AGLGTY 181 (301)
T ss_dssp CSCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHH
T ss_pred CCCcEEEEeCchhhcCCC--------------------------------------------------------CCchHH
Confidence 2 4689999998765321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++.+.+++|+.|.++... +........... ........+......++++++
T Consensus 182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pe 253 (301)
T 3tjr_A 182 GVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS-------NSERIRGADYGM-SATPEGAFGPLPTQDESVSAD 253 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH-------HHHHHC-----------------------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc-------ccccccchhhcc-ccChhhhccccccccCCCCHH
Confidence 99999888877654 45799999999998764321 000000000000 000001112223345689999
Q ss_pred HHHHHHHHHHHH
Q 008315 307 MVVNAMIVAMVA 318 (570)
Q Consensus 307 dva~aii~a~~~ 318 (570)
+||++++.++..
T Consensus 254 dvA~~i~~~l~~ 265 (301)
T 3tjr_A 254 DVARLTADAILA 265 (301)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999873
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-15 Score=151.86 Aligned_cols=222 Identities=18% Similarity=0.152 Sum_probs=150.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|+++|. +|+++.|+.... +...++ +++.. ..++.+
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------l~~~~--------~~~~~~ 74 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA---RLVLSGRDVSEL---DAARRA---------LGEQF--------GTDVHT 74 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHHHH---------HHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHHhc--------CCcEEE
Confidence 5799999999999999999999999996 457888853221 111111 11111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|++++ +..+.++ ..+|++||+||..... +.++..+++|+.|+..+++++... .
T Consensus 75 ~~~Dv~~~-------~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (266)
T 4egf_A 75 VAIDLAEP-------DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAA 147 (266)
T ss_dssp EECCTTST-------THHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 99999964 2223333 3799999999976421 346778999999999999988543 1
Q ss_pred -CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 -~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.-.++|++||...+... .....|
T Consensus 148 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 171 (266)
T 4egf_A 148 GEGGAIITVASAAALAPL--------------------------------------------------------PDHYAY 171 (266)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCeEEEEEcchhhccCC--------------------------------------------------------CCChHH
Confidence 13589999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..++|+.|.++..... | ............. ....+...+
T Consensus 172 ~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~-----~~~~~~~~~~~~~---------p~~r~~~p~ 235 (266)
T 4egf_A 172 CTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV--W-----GDEAKSAPMIARI---------PLGRFAVPH 235 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH--T-----CSHHHHHHHHTTC---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh--c-----cChHHHHHHHhcC---------CCCCCcCHH
Confidence 99999999887754 3589999999999977532110 0 0011111222111 122456789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... --.++++++.+|
T Consensus 236 dva~~v~~L~s~~~~-~itG~~i~vdGG 262 (266)
T 4egf_A 236 EVSDAVVWLASDAAS-MINGVDIPVDGG 262 (266)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CccCcEEEECCC
Confidence 999999988864332 234889999887
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.8e-16 Score=155.06 Aligned_cols=208 Identities=13% Similarity=0.169 Sum_probs=142.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+.... +++..
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~--------------------------------~~~~~ 57 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGAP--------------------------------KGLFG 57 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------------TTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHH--------------------------------HHhcC
Confidence 6889999999999999999999999995 467888865321 12224
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 58 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 130 (247)
T 1uzm_A 58 VEVDVTD-------SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 130 (247)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred eeccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 7899995 333334433 68999999997543 1356788999999999999988642 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 131 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (247)
T 1uzm_A 131 KFGRMIFIGSVSGLWGI--------------------------------------------------------GNQANYA 154 (247)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------CCHHHH
T ss_pred CCCEEEEECCHhhccCC--------------------------------------------------------CCChhHH
Confidence 56899999997654211 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++.+.+++|+.|.++..... . .......... . ....+++++|
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~--~~~~~~~~~~----~-----p~~~~~~~~d 216 (247)
T 1uzm_A 155 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-------D--ERIQQGALQF----I-----PAKRVGTPAE 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-------C--HHHHHHHGGG----C-----TTCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-------C--HHHHHHHHhc----C-----CCCCCcCHHH
Confidence 9999888877654 3589999999999876432100 0 1111111110 1 1124689999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.... ..-.++++++.++
T Consensus 217 vA~~~~~l~s~~~-~~~~G~~i~vdgG 242 (247)
T 1uzm_A 217 VAGVVSFLASEDA-SYISGAVIPVDGG 242 (247)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHcCccc-cCCcCCEEEECCC
Confidence 9999998876332 2234789999876
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-16 Score=157.41 Aligned_cols=224 Identities=12% Similarity=0.114 Sum_probs=150.7
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||+|+||++++++|++.|. +|+++.|+.... +...++ +.+.. ..++.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~~~---------~~~~~--------~~~~~ 80 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC---HTVIASRSLPRV---LTAARK---------LAGAT--------GRRCL 80 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCHHHH---HHHHHH---------HHHHH--------SSCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHHHH---------HHHhc--------CCcEE
Confidence 36899999999999999999999999996 457777764221 111111 11111 25789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 153 (277)
T 4fc7_A 81 PLSMDVRA-------PPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFR 153 (277)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999995 333334443 79999999996432 1346778999999999999987531
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... .....|
T Consensus 154 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 177 (277)
T 4fc7_A 154 DHGGVIVNITATLGNRGQ--------------------------------------------------------ALQVHA 177 (277)
T ss_dssp HHCEEEEEECCSHHHHTC--------------------------------------------------------TTCHHH
T ss_pred cCCCEEEEECchhhCCCC--------------------------------------------------------CCcHHH
Confidence 134689999998665321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..++|+.|.++... ................. ....+...+
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~---------p~~r~~~p~ 242 (277)
T 4fc7_A 178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGL------RRLGGPQASLSTKVTAS---------PLQRLGNKT 242 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHH------HHHSCCHHHHHHHHHTS---------TTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhh------hhccCCHHHHHHHhccC---------CCCCCcCHH
Confidence 99999999988764 35899999999999875210 00011111122222111 112356789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... --.|+++++.+|
T Consensus 243 dvA~~v~fL~s~~~~-~itG~~i~vdGG 269 (277)
T 4fc7_A 243 EIAHSVLYLASPLAS-YVTGAVLVADGG 269 (277)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHcCCccC-CcCCCEEEECCC
Confidence 999999998864332 234889999887
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=6.7e-16 Score=152.90 Aligned_cols=223 Identities=10% Similarity=0.085 Sum_probs=145.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
....++|+||||||+|+||++++++|++.|.. |+++.|...... .+... ++ ++. ..+
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~---v~~~~~~~~~~~-~~~~~-~~---------~~~---------~~~ 64 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR---VVAGCGPNSPRR-VKWLE-DQ---------KAL---------GFD 64 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEE---EEEEECTTCSSH-HHHHH-HH---------HHT---------TCC
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCE---EEEEeCCCHHHH-HHHHH-HH---------Hhc---------CCe
Confidence 34568999999999999999999999999854 456664332221 11111 11 111 256
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++.+...
T Consensus 65 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 137 (256)
T 3ezl_A 65 FYASEGNVGD-------WDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGM 137 (256)
T ss_dssp CEEEECCTTC-------HHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEecCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 8899999995 333334443 689999999976421 446778999999988888876431
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||....... ....
T Consensus 138 ~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~ 161 (256)
T 3ezl_A 138 VERGWGRIINISSVNGQKGQ--------------------------------------------------------FGQT 161 (256)
T ss_dssp HHHTCEEEEEECCCCGGGSC--------------------------------------------------------SCCH
T ss_pred HhcCCCEEEEEcchhhccCC--------------------------------------------------------CCCc
Confidence 255789999997654321 1246
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+++.. ..++.+.+++|+.|.++..... .......+..+. ....+..
T Consensus 162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~---------~~~~~~~ 223 (256)
T 3ezl_A 162 NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---------RPDVLEKIVATI---------PVRRLGS 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---------CHHHHHHHHHHS---------TTSSCBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---------CHHHHHHHHhcC---------CCCCCcC
Confidence 7999999888877654 3579999999999976533211 011222221111 1124567
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++.... ....|+++++.+|
T Consensus 224 ~~dva~~~~~l~s~~~-~~~tG~~i~vdgG 252 (256)
T 3ezl_A 224 PDEIGSIVAWLASEES-GFSTGADFSLNGG 252 (256)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCCcc-cCCcCcEEEECCC
Confidence 8999999998875332 2234889999887
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.9e-16 Score=156.73 Aligned_cols=220 Identities=12% Similarity=0.132 Sum_probs=146.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+.+++ +. ..++.+
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~~---~~~~~~~l---------~~----------~~~~~~ 81 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA---RVFICARDAEA---CADTATRL---------SA----------YGDCQA 81 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHHH---HHHHHHHH---------TT----------SSCEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHHH---------Hh----------cCceEE
Confidence 5789999999999999999999999995 45777775421 11111111 00 126788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 82 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 154 (276)
T 2b4q_A 82 IPADLSS-------EAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRS 154 (276)
T ss_dssp CCCCTTS-------HHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 79999999997532 1346788999999998888877531 1
Q ss_pred Cc----eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 153 KL----KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 153 ~l----k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+. .++|++||...+.... +..
T Consensus 155 ~~~~~~g~iV~isS~~~~~~~~-------------------------------------------------------~~~ 179 (276)
T 2b4q_A 155 ASAENPARVINIGSVAGISAMG-------------------------------------------------------EQA 179 (276)
T ss_dssp CCSSSCEEEEEECCGGGTCCCC-------------------------------------------------------CSC
T ss_pred cCCCCCCEEEEECCHHHcCCCC-------------------------------------------------------CCc
Confidence 33 7999999987653211 112
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhc-CCCceeecCCCceeec
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQ-GNLPCLVGETKTIMDV 302 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~-G~~~~~~~~~~~~~d~ 302 (570)
..|+.||+..|.+.+.. ..++.+.+++|+.|.++... .+... ....+.. +.. ....+
T Consensus 180 ~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~~~------~~~~~~~~~~~--------p~~r~ 242 (276)
T 2b4q_A 180 YAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR---HIAND------PQALEADSASI--------PMGRW 242 (276)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH---HHHHC------HHHHHHHHHTS--------TTSSC
T ss_pred cccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh---hcchh------HHHHHHhhcCC--------CCCCc
Confidence 27999999999988764 35899999999999775321 11000 0011111 000 11236
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...+|+|++++.++.... ....++++++.++
T Consensus 243 ~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG 273 (276)
T 2b4q_A 243 GRPEEMAALAISLAGTAG-AYMTGNVIPIDGG 273 (276)
T ss_dssp CCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCccc-cCCCCCEEEeCCC
Confidence 789999999999886432 2234789998776
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-15 Score=151.29 Aligned_cols=235 Identities=12% Similarity=0.112 Sum_probs=150.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc-------cHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE-------SAALRFQNEVLAKDLFNVLKEKWGTRLNS 81 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~-------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
-++||+++||||+|+||++++++|+++|. +|+++.|..+.. ...+++. +.. +.+...
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~------- 71 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA---DIIAVDIAGKLPSCVPYDPASPDDLS-ETV-----RLVEAA------- 71 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEECCSCCCTTCCSCCCCHHHHH-HHH-----HHHHHT-------
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeccccccccccccccCHHHHH-HHH-----HHHHhc-------
Confidence 46899999999999999999999999996 457777743210 0112222 110 011111
Q ss_pred cccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHH
Q 008315 82 FISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~ 147 (570)
..++.++.+|+++ .+..+.++ ..+|++||+||..... +.++..+++|+.|+.+++++
T Consensus 72 --~~~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 142 (277)
T 3tsc_A 72 --NRRIVAAVVDTRD-------FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMA 142 (277)
T ss_dssp --TCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred --CCeEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHH
Confidence 2578999999995 33333444 3699999999986432 34677899999999999998
Q ss_pred HHHc----cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccc
Q 008315 148 AKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAK 223 (570)
Q Consensus 148 a~~~----~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 223 (570)
+... +.-.++|++||...+...
T Consensus 143 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------------ 168 (277)
T 3tsc_A 143 GAPRIIEGGRGGSIILISSAAGMKMQ------------------------------------------------------ 168 (277)
T ss_dssp HHHHHHHHTSCEEEEEECCGGGTSCC------------------------------------------------------
T ss_pred HHHHHHhcCCCCEEEEEccHhhCCCC------------------------------------------------------
Confidence 7542 124689999998765321
Q ss_pred cCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcC-CCceeecCCC
Q 008315 224 IHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG-NLPCLVGETK 297 (570)
Q Consensus 224 ~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~ 297 (570)
.....|+.||+..+.+.+.. ..++.+..++|+.|.++.... ............. ..........
T Consensus 169 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
T 3tsc_A 169 --PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHVLTPFL 238 (277)
T ss_dssp --SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTTTCCSS
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHHhhhcc
Confidence 12357999999999988764 457999999999997754311 0000111110000 0000011111
Q ss_pred ceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 298 TIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 298 ~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
. .-+...+|+|++++.++..... .-.|+++++.+|
T Consensus 239 p-~r~~~pedvA~~v~~L~s~~~~-~itG~~i~vdGG 273 (277)
T 3tsc_A 239 P-DWVAEPEDIADTVCWLASDESR-KVTAAQIPVDQG 273 (277)
T ss_dssp S-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred C-CCCCCHHHHHHHHHHHhCcccc-CCcCCEEeeCCC
Confidence 1 1378899999999998864432 234789999876
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-15 Score=151.39 Aligned_cols=224 Identities=14% Similarity=0.106 Sum_probs=148.2
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-+++|+||||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +.+.. ..++
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~~--------~~~~ 73 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC---SVVVASRNLEE---ASEAAQK---------LTEKY--------GVET 73 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHH--------CCCE
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHHhc--------CCeE
Confidence 346899999999999999999999999996 45788886421 1111111 11111 2467
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
.++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++.. +
T Consensus 74 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 146 (267)
T 1vl8_A 74 MAFRCDVSN-------YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLR 146 (267)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 889999995 333334443 799999999976432 34667899999999999988753 2
Q ss_pred -cCceEEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 -VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 -~~lk~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||..+ .... ....
T Consensus 147 ~~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~ 170 (267)
T 1vl8_A 147 ESDNPSIINIGSLTVEEVTM--------------------------------------------------------PNIS 170 (267)
T ss_dssp TCSSCEEEEECCGGGTCCCS--------------------------------------------------------SSCH
T ss_pred HcCCcEEEEECCcchhccCC--------------------------------------------------------CCCh
Confidence 24679999999763 2110 1235
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..|.+++.. ..++++.+++|+.|.++... .+.. . ......+.... + ...++.
T Consensus 171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~---~-~~~~~~~~~~~----p-----~~~~~~ 234 (267)
T 1vl8_A 171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE---AVFS---D-PEKLDYMLKRI----P-----LGRTGV 234 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH---HHHT---C-HHHHHHHHHTC----T-----TSSCBC
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc---cccc---C-hHHHHHHHhhC----C-----CCCCcC
Confidence 7999999999988764 35899999999999765321 1100 0 11111111111 0 123678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++..... .-.++++++.+|
T Consensus 235 p~dvA~~v~~l~s~~~~-~itG~~i~vdGG 263 (267)
T 1vl8_A 235 PEDLKGVAVFLASEEAK-YVTGQIIFVDGG 263 (267)
T ss_dssp GGGGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCcccc-CCcCCeEEECCC
Confidence 89999999988764322 224788888776
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-15 Score=149.26 Aligned_cols=213 Identities=14% Similarity=0.144 Sum_probs=144.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||||+||++++++|+++|+ +|+++.|+.. ++. ++. ++ ..+.+
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~---~V~~~~r~~~------~~~-~~~---------~~----------~~~~~ 53 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEEG------PLR-EAA---------EA----------VGAHP 53 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HHH---------HT----------TTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-HHH---------HH----------cCCEE
Confidence 4789999999999999999999999996 4577787532 111 110 00 12678
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.++++++... .
T Consensus 54 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 126 (245)
T 1uls_A 54 VVMDVAD-------PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (245)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 8999995 333334443 589999999975421 346778999999999999988653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...++.. ....|+
T Consensus 127 ~~g~iv~isS~~~~~~~---------------------------------------------------------~~~~Y~ 149 (245)
T 1uls_A 127 NPGSIVLTASRVYLGNL---------------------------------------------------------GQANYA 149 (245)
T ss_dssp CCEEEEEECCGGGGCCT---------------------------------------------------------TCHHHH
T ss_pred CCCEEEEEccchhcCCC---------------------------------------------------------CchhHH
Confidence 46799999998733211 135799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+.+++|+.|.++.....+ ........... + ...++..+|
T Consensus 150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~----p-----~~~~~~~~d 211 (245)
T 1uls_A 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---------EKVREKAIAAT----P-----LGRAGKPLE 211 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---------HHHHHHHHHTC----T-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcC---------HHHHHHHHhhC----C-----CCCCcCHHH
Confidence 9999888877654 45899999999999775432111 11111111111 1 113678999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.++++++.++
T Consensus 212 vA~~v~~l~s~~~~-~~tG~~~~vdgG 237 (245)
T 1uls_A 212 VAYAALFLLSDESS-FITGQVLFVDGG 237 (245)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCEEEECCC
Confidence 99999988864322 234788988776
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-15 Score=152.65 Aligned_cols=220 Identities=15% Similarity=0.115 Sum_probs=148.2
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+|+||||+ |+||++++++|++.|. +|+++.|+.......+.+ .++. .++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~~~~~l-------------~~~~---------~~~ 58 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA---TLAFTYLNESLEKRVRPI-------------AQEL---------NSP 58 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC---EEEEEESSTTTHHHHHHH-------------HHHT---------TCC
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHH-------------HHhc---------CCc
Confidence 578999999999 9999999999999995 467888876422121111 1111 236
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------c---cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------D---ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~---~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|+++ .+..+.+++ .+|++||+||.... + +.++..+++|+.|+.++++++.
T Consensus 59 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 131 (275)
T 2pd4_A 59 YVYELDVSK-------EEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLK 131 (275)
T ss_dssp CEEECCTTC-------HHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 789999995 333334443 68999999997542 1 3467789999999999999987
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|++||....... ...
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 155 (275)
T 2pd4_A 132 PLLNNGASVLTLSYLGSTKYM--------------------------------------------------------AHY 155 (275)
T ss_dssp GGEEEEEEEEEEECGGGTSBC--------------------------------------------------------TTC
T ss_pred HHhccCCEEEEEecchhcCCC--------------------------------------------------------CCc
Confidence 64 212589999997654211 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+.+++|+.|.++.....+. .......+.... + ...+.
T Consensus 156 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~----p-----~~~~~ 219 (275)
T 2pd4_A 156 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-------FRMILKWNEINA----P-----LRKNV 219 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-------HHHHHHHHHHHS----T-----TSSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-------cHHHHHHHHhcC----C-----cCCCC
Confidence 57999999999988764 348999999999998864322111 111111111111 0 11246
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++.... ....++++++.++
T Consensus 220 ~p~dva~~~~~l~s~~~-~~~tG~~~~vdgg 249 (275)
T 2pd4_A 220 SLEEVGNAGMYLLSSLS-SGVSGEVHFVDAG 249 (275)
T ss_dssp CHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccc-cCCCCCEEEECCC
Confidence 78999999998886432 2224788988876
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-16 Score=155.49 Aligned_cols=212 Identities=10% Similarity=0.144 Sum_probs=143.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|+++|. +|+++.|... ...+ + ...++.+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~~-------------~--------~~~~~~~ 56 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGA---QVVVLDIRGE------DVVA-------------D--------LGDRARF 56 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTC---EEEEEESSCH------HHHH-------------H--------TCTTEEE
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCchH------HHHH-------------h--------cCCceEE
Confidence 5789999999999999999999999996 4577777321 1110 0 1257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCC-----------cccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITK-----------FDERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~-----------f~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|+++ .+..+.+++ .+|++||+||... ..+.++..+++|+.|+..+++++...
T Consensus 57 ~~~D~~~-------~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 129 (257)
T 3tl3_A 57 AAADVTD-------EAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERI 129 (257)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 9999995 333344444 8999999999742 12447788999999999999988753
Q ss_pred ----------cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccc
Q 008315 152 ----------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 152 ----------~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
.+-.++|++||...+....
T Consensus 130 ~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------------------------------------------- 158 (257)
T 3tl3_A 130 AKTEPVGPNAEERGVIINTASVAAFDGQI--------------------------------------------------- 158 (257)
T ss_dssp TTSCCC--CCCCSEEEEEECCCC--CCHH---------------------------------------------------
T ss_pred HHhcccccccCCCcEEEEEcchhhcCCCC---------------------------------------------------
Confidence 1235899999987653210
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCC
Q 008315 222 AKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
....|+.||+..+.+.+.. ..++.+..++|+.|.++.....+ ............
T Consensus 159 -----~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~------- 217 (257)
T 3tl3_A 159 -----GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP---------EEARASLGKQVP------- 217 (257)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C---------HHHHHHHHHTSS-------
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc---------HHHHHHHHhcCC-------
Confidence 1257999999888877654 45899999999999775432111 111112221111
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
....+...+|+|++++.++.. ..-.|+++++.+|
T Consensus 218 -~~~r~~~p~dva~~v~~l~s~---~~itG~~i~vdGG 251 (257)
T 3tl3_A 218 -HPSRLGNPDEYGALAVHIIEN---PMLNGEVIRLDGA 251 (257)
T ss_dssp -SSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred -CCCCccCHHHHHHHHHHHhcC---CCCCCCEEEECCC
Confidence 012467889999999998863 2334889999887
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.6e-16 Score=157.51 Aligned_cols=193 Identities=13% Similarity=0.136 Sum_probs=136.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|. +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~~ 84 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKHG---LEETAAK---------CKGL---------GAKVHT 84 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEEcCHHH---HHHHHHH---------HHhc---------CCeEEE
Confidence 6789999999999999999999999995 46788886421 1111111 1111 246899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.|+.++++.+... .
T Consensus 85 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 157 (272)
T 1yb1_A 85 FVVDCSN-------REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 157 (272)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 789999999976432 345678999999988888877542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+.... ....|+
T Consensus 158 ~~~~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 181 (272)
T 1yb1_A 158 NHGHIVTVASAAGHVSVP--------------------------------------------------------FLLAYC 181 (272)
T ss_dssp TCEEEEEECCCC-CCCHH--------------------------------------------------------HHHHHH
T ss_pred CCCEEEEEechhhcCCCC--------------------------------------------------------CchhHH
Confidence 568999999987653210 125799
Q ss_pred HHHHHHHHHHHHh--------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 233 FTKTMGEMIMQQS--------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 233 ~sK~~aE~~v~~~--------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.||+..|.+++.. ..+++++++||+.|.++... .. . .....++.
T Consensus 182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~------~~---~-------------------~~~~~~~~ 233 (272)
T 1yb1_A 182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK------NP---S-------------------TSLGPTLE 233 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT------CT---H-------------------HHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc------cc---c-------------------ccccCCCC
Confidence 9999999988754 23799999999999875421 00 0 00124678
Q ss_pred HHHHHHHHHHHHH
Q 008315 305 VDMVVNAMIVAMV 317 (570)
Q Consensus 305 VDdva~aii~a~~ 317 (570)
++|+|++++.++.
T Consensus 234 ~~dva~~i~~~~~ 246 (272)
T 1yb1_A 234 PEEVVNRLMHGIL 246 (272)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999886
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-15 Score=153.90 Aligned_cols=219 Identities=15% Similarity=0.142 Sum_probs=150.6
Q ss_pred cCCCEEEEECCccH--hHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTGF--VAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGF--lG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+|+||||||+ ||++++++|++.|. +|+++.|+. .. +.++ + +.++ ..++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~---~V~~~~r~~-~~---~~~~-~---------l~~~---------~~~~ 77 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGA---ELAFTYVGQ-FK---DRVE-K---------LCAE---------FNPA 77 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTC---EEEEEECTT-CH---HHHH-H---------HHGG---------GCCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCC---EEEEeeCch-HH---HHHH-H---------HHHh---------cCCc
Confidence 57899999999988 99999999999995 467888876 22 2222 1 1122 1457
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc------------ccCHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF------------DERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f------------~~~~~~~~~~Nv~gt~~ll~~a 148 (570)
.++.+|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++
T Consensus 78 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 150 (280)
T 3nrc_A 78 AVLPCDVIS-------DQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEG 150 (280)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEeecCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999995 333334443 57999999998643 1345667999999999999998
Q ss_pred HHc--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 149 KKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 149 ~~~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
... ++-.++|++||....... .
T Consensus 151 ~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~ 174 (280)
T 3nrc_A 151 RSMMKNRNASMVALTYIGAEKAM--------------------------------------------------------P 174 (280)
T ss_dssp HHHHTTTTCEEEEEECGGGTSCC--------------------------------------------------------T
T ss_pred HHHhhcCCCeEEEEeccccccCC--------------------------------------------------------C
Confidence 764 134689999998765321 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceee
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|+.||+..+.+++.. ..++.+.+++|+.|.++...... ............. ....
T Consensus 175 ~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---------p~~~ 238 (280)
T 3nrc_A 175 SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-------NFKKMLDYNAMVS---------PLKK 238 (280)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-------THHHHHHHHHHHS---------TTCS
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-------chHHHHHHHHhcC---------CCCC
Confidence 2467999999999988754 45799999999999876442221 1112222221111 1123
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..++|+|++++.++..... .-.|+++++.+|
T Consensus 239 ~~~pedvA~~v~~l~s~~~~-~~tG~~i~vdgG 270 (280)
T 3nrc_A 239 NVDIMEVGNTVAFLCSDMAT-GITGEVVHVDAG 270 (280)
T ss_dssp CCCHHHHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCcccC-CcCCcEEEECCC
Confidence 56789999999988764322 234889999887
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.5e-15 Score=153.92 Aligned_cols=236 Identities=13% Similarity=0.136 Sum_probs=150.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc------HHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES------AALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~------~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+||||||+|+||++++++|++.|.. |+++.|...... ..+++. +.. +.+++ .
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~---Vv~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~-~-------- 105 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGAD---IVAIDLCRQQPNLDYAQGSPEELK-ETV-----RLVEE-Q-------- 105 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEECCCCCTTCCSCCCCHHHHH-HHH-----HHHHH-T--------
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCe---EEEEecccccccccccccCHHHHH-HHH-----HHHHh-c--------
Confidence 58999999999999999999999999964 567777532210 112222 111 11111 1
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+++++.
T Consensus 106 ~~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 178 (317)
T 3oec_A 106 GRRIIARQADVRD-------LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVL 178 (317)
T ss_dssp TCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCeEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 2578999999995 333344443 79999999997643 14467789999999999999885
Q ss_pred Hc----cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 150 KC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 150 ~~----~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.. +.-.++|++||...+...
T Consensus 179 ~~m~~~~~~g~Iv~isS~~~~~~~-------------------------------------------------------- 202 (317)
T 3oec_A 179 PSMIERGQGGSVIFVSSTVGLRGA-------------------------------------------------------- 202 (317)
T ss_dssp HHHHHTCSCEEEEEECCGGGSSCC--------------------------------------------------------
T ss_pred HHHHHcCCCCEEEEECcHHhcCCC--------------------------------------------------------
Confidence 42 124679999998765321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC---Cccccccch-HHHHHHHhcCCCceeecCC
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP---GWVEDLKTI-NALFVASAQGNLPCLVGET 296 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~---gw~~~~~~~-~~~i~~~~~G~~~~~~~~~ 296 (570)
.....|+.||+..+.+.+.. ..++.+..|+|+.|.++...... .+....... ..-...... .. .
T Consensus 203 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~ 275 (317)
T 3oec_A 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS-QL------T 275 (317)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHT-TT------C
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHh-hh------c
Confidence 12357999999999988765 35899999999999875321000 000000000 000000000 00 1
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.....++.++|||++++.++..... --.|+++++.+|
T Consensus 276 ~~p~~~~~pedvA~av~fL~s~~a~-~itG~~i~vdGG 312 (317)
T 3oec_A 276 LLPIPWVEPEDVSNAVAWLASDEAR-YIHGAAIPVDGG 312 (317)
T ss_dssp SSSSSSBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred cCCCCCCCHHHHHHHHHHHcCCccc-CCCCCEEEECcc
Confidence 1114678999999999888754322 234889999887
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-16 Score=154.78 Aligned_cols=217 Identities=15% Similarity=0.159 Sum_probs=146.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 56 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA---TVIVSDINAEG---AKAAA-------------ASI--------GKKARA 56 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEECSCHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------CCceEE
Confidence 6899999999999999999999999996 45677775321 11111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH----c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK----C 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~----~ 151 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++.. .
T Consensus 57 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 129 (247)
T 3rwb_A 57 IAADISD-------PGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAA 129 (247)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 9999995 333344444 799999999976432 34677899999999999988543 2
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+...++|++||....... .....|
T Consensus 130 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 153 (247)
T 3rwb_A 130 GKAGRVISIASNTFFAGT--------------------------------------------------------PNMAAY 153 (247)
T ss_dssp TCCEEEEEECCTHHHHTC--------------------------------------------------------TTCHHH
T ss_pred CCCcEEEEECchhhccCC--------------------------------------------------------CCchhh
Confidence 225789999997654321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..++|+.|.++.....+. . ....+.. ... ....+...+
T Consensus 154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~--~~~~~~~-~~~-----------~~~r~~~pe 216 (247)
T 3rwb_A 154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH---N--EAFGFVE-MLQ-----------AMKGKGQPE 216 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG---G--GGHHHHH-HHS-----------SSCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh---h--HHHHHHh-ccc-----------ccCCCcCHH
Confidence 99998888887654 358999999999997753321110 0 0011111 100 011245689
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|+++..++..... --.|+++++.+|
T Consensus 217 dva~~v~~L~s~~~~-~itG~~i~vdGG 243 (247)
T 3rwb_A 217 HIADVVSFLASDDAR-WITGQTLNVDAG 243 (247)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCCCCEEEECCC
Confidence 999999988864332 234789999876
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.2e-16 Score=152.22 Aligned_cols=214 Identities=11% Similarity=0.117 Sum_probs=146.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHH-hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILR-VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~-~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|+||||||+|+||++++++|++ .|. .|++..|..... .+++.+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~---~v~~~~~~~~~~-------------------------------~~~~~~ 48 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH---TVINIDIQQSFS-------------------------------AENLKF 48 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE---EEEEEESSCCCC-------------------------------CTTEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc---EEEEeccccccc-------------------------------cccceE
Confidence 678999999999999999999998 563 456666654311 256789
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-----CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-----ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-----~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~ 156 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... ..-.+
T Consensus 49 ~~~Dv~~-------~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~ 121 (244)
T 4e4y_A 49 IKADLTK-------QQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGAS 121 (244)
T ss_dssp EECCTTC-------HHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEE
T ss_pred EecCcCC-------HHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcE
Confidence 9999995 333345544 789999999985321 346778999999999999988764 22248
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+... .....|+.||+
T Consensus 122 iv~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 145 (244)
T 4e4y_A 122 IVFNGSDQCFIAK--------------------------------------------------------PNSFAYTLSKG 145 (244)
T ss_dssp EEEECCGGGTCCC--------------------------------------------------------TTBHHHHHHHH
T ss_pred EEEECCHHHccCC--------------------------------------------------------CCCchhHHHHH
Confidence 9999998765321 12357999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccccc-----chHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK-----TINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~-----~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
..|.+.+.. ..++.+.+++|+.|.++..... ..... ........... ......+..++
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~ 213 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL---IQKYANNVGISFDEAQKQEEK---------EFPLNRIAQPQ 213 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH---HHHHHHHHTCCHHHHHHHHHT---------TSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH---HHhhhhhcCCCHHHHHHHHhh---------cCCCCCCcCHH
Confidence 999988764 4589999999999976532100 00000 00001111111 11223567899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... .-.++++++.+|
T Consensus 214 dvA~~v~~l~s~~~~-~itG~~i~vdGG 240 (244)
T 4e4y_A 214 EIAELVIFLLSDKSK-FMTGGLIPIDGG 240 (244)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhcCccc-cccCCeEeECCC
Confidence 999999998864332 234789999876
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.6e-15 Score=153.09 Aligned_cols=226 Identities=14% Similarity=0.167 Sum_probs=149.9
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-++||+||||||+|+||++++++|++.|....+|++..|+... .+.+.+ .++...+ ..++
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~~ 89 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK---LEELKK---------TIDQEFP-------NAKV 89 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHH---HHHHHH---------HHHHHCT-------TCEE
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHH---HHHHHH---------HHHhhCC-------CCeE
Confidence 44689999999999999999999999998755577888886422 122221 1222211 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
.++.+|+++ .+..+.+++ .+|++||+||... + .+.++..+++|+.|+.++++++...
T Consensus 90 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 162 (287)
T 3rku_A 90 HVAQLDITQ-------AEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIF 162 (287)
T ss_dssp EEEECCTTC-------GGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEECCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999995 333345544 5899999999753 1 2446788999999999999988431
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||....... ....
T Consensus 163 ~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~ 186 (287)
T 3rku_A 163 QAKNSGDIVNLGSIAGRDAY--------------------------------------------------------PTGS 186 (287)
T ss_dssp HHHTCCEEEEECCGGGTSCC--------------------------------------------------------TTCH
T ss_pred HhcCCCeEEEECChhhcCCC--------------------------------------------------------CCCc
Confidence 255789999998764321 1246
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++.+..|+|+.|..+... .................. .+.
T Consensus 187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~------~~~~~~~~~~~~~~~~~~------------p~~ 248 (287)
T 3rku_A 187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL------VRYRGNEEQAKNVYKDTT------------PLM 248 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH------HHTTTCHHHHHHHHTTSC------------CEE
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc------ccccCcHHHHHHhhcccC------------CCC
Confidence 7999999999988764 45899999999999765310 000000111111111111 126
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|||++++.++..... --.++++.+.++
T Consensus 249 pedvA~~v~~l~s~~~~-~i~g~~i~v~~g 277 (287)
T 3rku_A 249 ADDVADLIVYATSRKQN-TVIADTLIFPTN 277 (287)
T ss_dssp HHHHHHHHHHHHTSCTT-EEEEEEEEEETT
T ss_pred HHHHHHHHHHHhCCCCC-eEecceEEeeCC
Confidence 89999999998863221 112567777765
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.4e-16 Score=152.03 Aligned_cols=198 Identities=13% Similarity=0.056 Sum_probs=141.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||+|+||++++++|+++|+ +|+++.|+.... .-..+.
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~~---------------------------------~~~~~~ 65 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSW---NTISIDFRENPN---------------------------------ADHSFT 65 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCTT---------------------------------SSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCcccc---------------------------------cccceE
Confidence 78999999999999999999999996 467888876432 113466
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-cCce
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-VKLK 155 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk 155 (570)
.|+++ .+..+.+++ .+|+|||+||.... .+.++..+++|+.|+.++++++... ..-.
T Consensus 66 ~d~~d-------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g 138 (251)
T 3orf_A 66 IKDSG-------EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGG 138 (251)
T ss_dssp CSCSS-------HHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred EEeCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCC
Confidence 77774 333334443 57999999996432 1346677899999999999998763 2224
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+... .....|+.||
T Consensus 139 ~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK 162 (251)
T 3orf_A 139 LFVLTGASAALNRT--------------------------------------------------------SGMIAYGATK 162 (251)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEEechhhccCC--------------------------------------------------------CCCchhHHHH
Confidence 89999998765321 1246799999
Q ss_pred HHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 236 TMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 236 ~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+..|.+++.. ..++.+.+++|+.|.++.. ..... ......+++++|+
T Consensus 163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-----------------~~~~~---------~~~~~~~~~~~dv 216 (251)
T 3orf_A 163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-----------------RKYMS---------DANFDDWTPLSEV 216 (251)
T ss_dssp HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-----------------HHHCT---------TSCGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-----------------hhhcc---------cccccccCCHHHH
Confidence 9999999865 2478999999998866421 11111 1123457889999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++..+......|+++++.++
T Consensus 217 a~~i~~l~~~~~~~~~tG~~i~v~~g 242 (251)
T 3orf_A 217 AEKLFEWSTNSDSRPTNGSLVKFETK 242 (251)
T ss_dssp HHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred HHHHHHHhcCccccCCcceEEEEecC
Confidence 99999998752223335789998876
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.3e-16 Score=153.22 Aligned_cols=209 Identities=14% Similarity=0.160 Sum_probs=142.8
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+|+||||||+||++++++|+++|. +|+++.|+.... +++.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~--------------------------------~~~~ 62 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGD---KVAITYRSGEPP--------------------------------EGFL 62 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSCCC--------------------------------TTSE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHhh--------------------------------ccce
Confidence 35789999999999999999999999995 457888864321 3367
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++...
T Consensus 63 ~~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 135 (253)
T 2nm0_A 63 AVKCDITD-------TEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLR 135 (253)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999995 333334443 47999999997542 2457888999999999999987542
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||........ ....|
T Consensus 136 ~~~g~iv~isS~~~~~~~~--------------------------------------------------------~~~~Y 159 (253)
T 2nm0_A 136 AKKGRVVLISSVVGLLGSA--------------------------------------------------------GQANY 159 (253)
T ss_dssp HTCEEEEEECCCCCCCCHH--------------------------------------------------------HHHHH
T ss_pred cCCCEEEEECchhhCCCCC--------------------------------------------------------CcHHH
Confidence 2567999999976542110 12479
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+.+.. ..++.+.+++|+.|.++..... .+. ....+... . ....++..+
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~------~~~~~~~~----~-----p~~~~~~p~ 221 (253)
T 2nm0_A 160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL---TDE------QRANIVSQ----V-----PLGRYARPE 221 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------------CHHHHHTT----C-----TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc---CHH------HHHHHHhc----C-----CCCCCcCHH
Confidence 99999999887754 4589999999999876532211 000 00111111 0 112468899
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... .-.++++++.++
T Consensus 222 dvA~~i~~l~s~~~~-~~tG~~i~vdGG 248 (253)
T 2nm0_A 222 EIAATVRFLASDDAS-YITGAVIPVDGG 248 (253)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCcccc-CCcCcEEEECCc
Confidence 999999988864322 224788988776
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-15 Score=152.85 Aligned_cols=220 Identities=14% Similarity=0.109 Sum_probs=146.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|+ +|+++.|+... .+.+. ++ ..++.+
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~ 58 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDESG---GRALE-------------QE---------LPGAVF 58 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------CTTEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HH---------hcCCeE
Confidence 6899999999999999999999999996 45777775321 11111 11 134788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~--~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... . +.++..+++|+.|+.++++++... .
T Consensus 59 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 131 (270)
T 1yde_A 59 ILCDVTQ-------EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 131 (270)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999995 333344443 78999999997532 1 236778999999999999988642 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||....... .....|+
T Consensus 132 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 155 (270)
T 1yde_A 132 SQGNVINISSLVGAIGQ--------------------------------------------------------AQAVPYV 155 (270)
T ss_dssp HTCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCEEEEEcCccccCCC--------------------------------------------------------CCCcccH
Confidence 34799999997643211 1135799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..|.+.+.. ..++++.++||+.|.++..+... .........+....... + ...+...+|
T Consensus 156 asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~----p-----~~r~~~p~d 223 (270)
T 1yde_A 156 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA---ALMPDPRASIREGMLAQ----P-----LGRMGQPAE 223 (270)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH---TTSSSHHHHHHHHHHTS----T-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh---hcccchHHHHHHHhhcC----C-----CCCCcCHHH
Confidence 9999999988765 35899999999999886321100 00000001111111100 0 113567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.. . .--.++++++.+|
T Consensus 224 va~~v~~L~s~-~-~~itG~~i~vdGG 248 (270)
T 1yde_A 224 VGAAAVFLASE-A-NFCTGIELLVTGG 248 (270)
T ss_dssp HHHHHHHHHHH-C-TTCCSCEEEESTT
T ss_pred HHHHHHHHccc-C-CCcCCCEEEECCC
Confidence 99999988864 2 2334789999887
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.69 E-value=6.3e-16 Score=150.90 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=125.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+|+|+||||||+||++++++|++.|+ +|+++.|+... .+.+. ++ ..++.++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~ 55 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY---RVGLMARDEKR---LQALA-------------AE---------LEGALPL 55 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------STTCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HH---------hhhceEE
Confidence 368999999999999999999999996 45788885321 11111 11 1367889
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cC
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VK 153 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~ 153 (570)
.+|+++ .+..+.++ .++|+|||+||..... +.++..+++|+.|+.++++.+.. + .+
T Consensus 56 ~~D~~~-------~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 128 (234)
T 2ehd_A 56 PGDVRE-------EGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG 128 (234)
T ss_dssp ECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred EecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 999995 33233433 3789999999975421 34677899999999877665532 1 25
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..+||++||...+... .....|+.
T Consensus 129 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~~ 152 (234)
T 2ehd_A 129 GGTIVNVGSLAGKNPF--------------------------------------------------------KGGAAYNA 152 (234)
T ss_dssp CEEEEEECCTTTTSCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECCchhcCCC--------------------------------------------------------CCCchhhH
Confidence 6899999998765321 12457999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..|.+.+.. ..+++++++||+.|.++..... . . . ...+..+|+
T Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~--------------~---~--------~~~~~~~dv 203 (234)
T 2ehd_A 153 SKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P--------------G---Q--------AWKLKPEDV 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------------------------CCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c--------------c---c--------cCCCCHHHH
Confidence 999888877654 3589999999998866422100 0 0 0 014689999
Q ss_pred HHHHHHHHHH
Q 008315 309 VNAMIVAMVA 318 (570)
Q Consensus 309 a~aii~a~~~ 318 (570)
|++++.++..
T Consensus 204 A~~~~~l~~~ 213 (234)
T 2ehd_A 204 AQAVLFALEM 213 (234)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHhCC
Confidence 9999998864
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=151.88 Aligned_cols=195 Identities=15% Similarity=0.195 Sum_probs=132.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+... .+.+.+++ .+. ..++.+
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~~---------~~~~~~ 82 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA---RVVLTARDVEK---LRAVEREI---------VAA---------GGEAES 82 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------HHh---------CCceeE
Confidence 5789999999999999999999999996 45788886422 11222111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC----c----ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK----F----DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~----f----~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||... + .+.++..+++|+.|+.++++.+...
T Consensus 83 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~ 155 (262)
T 3rkr_A 83 HACDLSH-------SDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIA 155 (262)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 9999995 333334433 5899999999732 1 1346778999999999999987542
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 156 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 179 (262)
T 3rkr_A 156 AKRGHIINISSLAGKNPV--------------------------------------------------------ADGAAY 179 (262)
T ss_dssp TTCCEEEEECSSCSSCCC--------------------------------------------------------TTCHHH
T ss_pred CCCceEEEEechhhcCCC--------------------------------------------------------CCCchH
Confidence 255789999998764321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..|.+++.. ..++++.+++|+.|..+...... .......++..+
T Consensus 180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------------------------~~~~~~~~~~p~ 233 (262)
T 3rkr_A 180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS--------------------------AKKSALGAIEPD 233 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------CCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc--------------------------cccccccCCCHH
Confidence 99999999988754 35899999999998764321100 001123457899
Q ss_pred HHHHHHHHHHH
Q 008315 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
|+|++++.++.
T Consensus 234 dvA~~v~~l~s 244 (262)
T 3rkr_A 234 DIADVVALLAT 244 (262)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999998885
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-15 Score=149.28 Aligned_cols=225 Identities=16% Similarity=0.196 Sum_probs=146.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
||+++||||+|+||++++++|++.|..+ .|++..|+... .+.+. ++. ..++.++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~ 56 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAP---LKKLK-------------EKY--------GDRFFYVV 56 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHH---HHHHH-------------HHH--------GGGEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHH---HHHHH-------------HHh--------CCceEEEE
Confidence 6899999999999999999999997653 56667775321 11221 111 25688999
Q ss_pred ccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 92 GDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++... .+
T Consensus 57 ~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~ 129 (254)
T 3kzv_A 57 GDITE-------DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN 129 (254)
T ss_dssp SCTTS-------HHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC-------HHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 99995 333344443 78999999997532 1346778999999999999988431 13
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.++|++||...+... .....|+.
T Consensus 130 -g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 152 (254)
T 3kzv_A 130 -GNVVFVSSDACNMYF--------------------------------------------------------SSWGAYGS 152 (254)
T ss_dssp -CEEEEECCSCCCCSS--------------------------------------------------------CCSHHHHH
T ss_pred -CeEEEEcCchhccCC--------------------------------------------------------CCcchHHH
Confidence 689999997755321 12457999
Q ss_pred HHHHHHHHHHHh---cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 234 TKTMGEMIMQQS---KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 234 sK~~aE~~v~~~---~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
||+..+.+.+.. ..++.+..++|+.|.++.....................+... .....+...+|+|+
T Consensus 153 sK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~r~~~p~dva~ 223 (254)
T 3kzv_A 153 SKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL---------KENNQLLDSSVPAT 223 (254)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH---------HTTC----CHHHHH
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH---------HhcCCcCCcccHHH
Confidence 999999988765 358999999999998876543322111000001111111110 01124678899999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++.++.......-.|+++++.++
T Consensus 224 ~v~~L~s~~~~~~itG~~i~vdg~ 247 (254)
T 3kzv_A 224 VYAKLALHGIPDGVNGQYLSYNDP 247 (254)
T ss_dssp HHHHHHHHCCCGGGTTCEEETTCG
T ss_pred HHHHHHhhcccCCCCccEEEecCc
Confidence 999888754212234788888765
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-15 Score=151.99 Aligned_cols=220 Identities=13% Similarity=0.088 Sum_probs=151.1
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+| +||++++++|++.|. +|+++.|+.... +.+. ++ .++. .++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~---~V~~~~r~~~~~---~~~~-~~---------~~~~---------~~~ 82 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA---EVALTYLSETFK---KRVD-PL---------AESL---------GVK 82 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC---EEEEEESSGGGH---HHHH-HH---------HHHH---------TCC
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC---EEEEEeCChHHH---HHHH-HH---------HHhc---------CCe
Confidence 5899999999998 999999999999996 457888874322 2222 11 1111 346
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+.++++++.
T Consensus 83 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 155 (296)
T 3k31_A 83 LTVPCDVSD-------AESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAE 155 (296)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999995 333344443 68999999997642 13467789999999999999987
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. ..-.++|++||....... ...
T Consensus 156 ~~m~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 179 (296)
T 3k31_A 156 PLMTNGGSILTLSYYGAEKVV--------------------------------------------------------PHY 179 (296)
T ss_dssp GGCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred HHhhcCCEEEEEEehhhccCC--------------------------------------------------------CCc
Confidence 63 234589999998765321 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..++|+.|.++..... .............. ....+.
T Consensus 180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~---------p~~r~~ 243 (296)
T 3k31_A 180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-------SDFHYILTWNKYNS---------PLRRNT 243 (296)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-------HHHHHHHHHHHHHS---------TTSSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-------cchHHHHHHHHhcC---------CCCCCC
Confidence 67999999999988764 4589999999999988654221 11111111111111 112346
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++..... --.|+++++.+|
T Consensus 244 ~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 273 (296)
T 3k31_A 244 TLDDVGGAALYLLSDLGR-GTTGETVHVDCG 273 (296)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccC-CccCCEEEECCC
Confidence 689999999998864332 234889999887
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=152.39 Aligned_cols=221 Identities=14% Similarity=0.120 Sum_probs=143.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|..| ++..+.... ..+.+.+++ +. . ..++.+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~V---v~~~~~~~~--~~~~~~~~~---------~~-~--------~~~~~~ 81 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTV---VINYAGKAA--AAEEVAGKI---------EA-A--------GGKALT 81 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEE---EEEESSCSH--HHHHHHHHH---------HH-T--------TCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEE---EEEcCCCHH--HHHHHHHHH---------Hh-c--------CCeEEE
Confidence 368999999999999999999999999654 455443322 122222111 11 1 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-ccCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++.+.. +..-
T Consensus 82 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 154 (267)
T 3u5t_A 82 AQADVSD-------PAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG 154 (267)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999995 333344443 799999999976431 34677789999999999988865 3333
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 155 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 178 (267)
T 3u5t_A 155 GRIINMSTSQVGLLH--------------------------------------------------------PSYGIYAAA 178 (267)
T ss_dssp EEEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHH
T ss_pred CeEEEEeChhhccCC--------------------------------------------------------CCchHHHHH
Confidence 589999987654321 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++.+..+.|+.|..+.... ...+ .....+... .....+..++|+|
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~------~~~~~~~~~---------~p~~r~~~pedvA 241 (267)
T 3u5t_A 179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE--GKSD------EVRDRFAKL---------APLERLGTPQDIA 241 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------------CHHHHHTS---------STTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc--cCCH------HHHHHHHhc---------CCCCCCcCHHHHH
Confidence 99999988765 358999999999997653211 0000 011111111 1223467789999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++.... .--.|+++++.+|
T Consensus 242 ~~v~~L~s~~~-~~itG~~i~vdGG 265 (267)
T 3u5t_A 242 GAVAFLAGPDG-AWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHSTTT-TTCCSEEEEESSS
T ss_pred HHHHHHhCccc-cCccCCEEEeCCC
Confidence 99998875322 2234789988775
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-15 Score=153.27 Aligned_cols=206 Identities=14% Similarity=0.175 Sum_probs=135.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+||||||||+||++++++|++.|. +|+++.|+... .+.+.+ .++... ...++.+
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~---------~~~~~~-------~~~~~~~ 87 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGL---KVVGCARTVGN---IEELAA---------ECKSAG-------YPGTLIP 87 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHH---------HHHHTT-------CSSEEEE
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEECChHH---HHHHHH---------HHHhcC-------CCceEEE
Confidence 6899999999999999999999999985 46788886421 112211 112111 0246888
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHH----HHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLG----AIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~g----t~~ll~~a~~~ 151 (570)
+.+|+++ .+..+.+++ ++|+|||+||..... +.++..+++|+.| ++.++..+++.
T Consensus 88 ~~~Dl~~-------~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~ 160 (279)
T 1xg5_A 88 YRCDLSN-------EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER 160 (279)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEecCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999995 333334443 799999999975421 3467789999999 66666666664
Q ss_pred cCc--eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 VKL--KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 ~~l--k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+. .++|++||...+.... . ....
T Consensus 161 -~~~~g~iv~isS~~~~~~~~-------~-----------------------------------------------~~~~ 185 (279)
T 1xg5_A 161 -NVDDGHIININSMSGHRVLP-------L-----------------------------------------------SVTH 185 (279)
T ss_dssp -TCCSCEEEEECCGGGTSCCS-------C-----------------------------------------------GGGH
T ss_pred -CCCCceEEEEcChhhcccCC-------C-----------------------------------------------CCCc
Confidence 44 7999999987753210 0 1235
Q ss_pred hHHHHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 230 TYVFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
.|+.||+..|.+++.. ..++++.+++|+.|.++.... .... .... +.... ....+
T Consensus 186 ~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~---~~~~--~~~~-~~~~~------------~~~~~ 247 (279)
T 1xg5_A 186 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK---LHDK--DPEK-AAATY------------EQMKC 247 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH---HTTT--CHHH-HHHHH------------C---C
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh---hccc--ChhH-Hhhhc------------ccccC
Confidence 7999999998877643 357999999999997653100 0000 0001 11000 11235
Q ss_pred chHHHHHHHHHHHHH
Q 008315 303 IPVDMVVNAMIVAMV 317 (570)
Q Consensus 303 VpVDdva~aii~a~~ 317 (570)
+.++|+|++++.++.
T Consensus 248 ~~~~dvA~~i~~l~~ 262 (279)
T 1xg5_A 248 LKPEDVAEAVIYVLS 262 (279)
T ss_dssp BCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhc
Confidence 789999999999886
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.8e-15 Score=149.95 Aligned_cols=231 Identities=14% Similarity=0.145 Sum_probs=149.4
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||++|||||+|+||++++++|++.|.. |+++.|.... ..+.+.+++ +. . ..++.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~---V~~~~~~~~~--~~~~~~~~~---------~~-~--------~~~~~ 71 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAK---VVVNYANSTK--DAEKVVSEI---------KA-L--------GSDAI 71 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH---------HH-T--------TCCEE
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCE---EEEEcCCCHH--HHHHHHHHH---------Hh-c--------CCcEE
Confidence 468999999999999999999999999964 4565554321 112222111 11 1 25789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VK 153 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~ 153 (570)
++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... ..
T Consensus 72 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 144 (270)
T 3is3_A 72 AIKADIRQ-------VPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE 144 (270)
T ss_dssp EEECCTTS-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc
Confidence 99999995 333334443 689999999986432 346778999999999999988764 22
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... . .....|+.
T Consensus 145 ~g~iv~isS~~~~~~~--------~-----------------------------------------------~~~~~Y~a 169 (270)
T 3is3_A 145 GGRIVLTSSNTSKDFS--------V-----------------------------------------------PKHSLYSG 169 (270)
T ss_dssp TCEEEEECCTTTTTCC--------C-----------------------------------------------TTCHHHHH
T ss_pred CCeEEEEeCchhccCC--------C-----------------------------------------------CCCchhHH
Confidence 3489999997632110 0 12467999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-Ccccc--ccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVED--LKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~--~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
||+..+.+.+.. ..++.+..++|+.|.++...... .+... .............. .....+...
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p 240 (270)
T 3is3_A 170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA---------SPLHRNGWP 240 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH---------STTCSCBCH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc---------CCCCCCCCH
Confidence 999999988764 35899999999999876432100 00000 00011111111111 112235678
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++..... --.|+++++.+|
T Consensus 241 ~dvA~~v~~L~s~~~~-~itG~~i~vdGG 268 (270)
T 3is3_A 241 QDVANVVGFLVSKEGE-WVNGKVLTLDGG 268 (270)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccC-CccCcEEEeCCC
Confidence 9999999988764322 234789999876
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-16 Score=158.68 Aligned_cols=215 Identities=13% Similarity=0.133 Sum_probs=146.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|++.|+ +|+++.|+.. ++. ++ .++. ..++.+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~---~V~~~~r~~~------~~~-~~---------~~~~--------~~~~~~ 56 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGA---SLVAVDREER------LLA-EA---------VAAL--------EAEAIA 56 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HHTC--------CSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCHH------HHH-HH---------HHHh--------cCceEE
Confidence 5789999999999999999999999996 4578888632 111 11 1111 146889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++... ++.
T Consensus 57 ~~~D~~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 129 (263)
T 2a4k_A 57 VVADVSD-------PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 129 (263)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC
Confidence 9999995 333334443 579999999975431 345677899999999999998764 223
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||...+ ... ....|+.|
T Consensus 130 g~iv~isS~~~~-~~~--------------------------------------------------------~~~~Y~as 152 (263)
T 2a4k_A 130 GSLVLTGSVAGL-GAF--------------------------------------------------------GLAHYAAG 152 (263)
T ss_dssp CEEEEECCCTTC-CHH--------------------------------------------------------HHHHHHHC
T ss_pred CEEEEEecchhc-CCC--------------------------------------------------------CcHHHHHH
Confidence 589999998765 110 12579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++.+.+++|+.|.++.....+ ........... + ...+...+|+|
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~----p-----~~~~~~p~dvA 214 (263)
T 2a4k_A 153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---------PWAWEQEVGAS----P-----LGRAGRPEEVA 214 (263)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---------HHHHHHHHHTS----T-----TCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---------HHHHHHHHhcC----C-----CCCCcCHHHHH
Confidence 99777776543 45899999999999876432211 11111111111 0 12367899999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++..... ...++++++.++
T Consensus 215 ~~v~~l~s~~~~-~~tG~~i~vdgG 238 (263)
T 2a4k_A 215 QAALFLLSEESA-YITGQALYVDGG 238 (263)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCcccc-CCcCCEEEECCC
Confidence 999988864322 234789999877
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-16 Score=155.36 Aligned_cols=234 Identities=11% Similarity=0.064 Sum_probs=141.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|++.|+ +|+++.|+..... . . +.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~~~~~-------------------------------~--~-~~~ 44 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH---QIVGIDIRDAEVI-------------------------------A--D-LST 44 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSSSSEE-------------------------------C--C-TTS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCchhhc-------------------------------c--c-ccc
Confidence 6899999999999999999999996 4678888653211 1 1 456
Q ss_pred cCCCCCCCCChhhhHHHHhC----CccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc---cCceEEEEEecccc
Q 008315 93 DISSEDLGLKDSNLKEELWN----ELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC---VKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~----~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV~vSTa~v 165 (570)
|++ +.+..+.+++ .+|+|||+||.....++++..+++|+.|+.++++++... .+..++|++||...
T Consensus 45 Dl~-------~~~~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 117 (257)
T 1fjh_A 45 AEG-------RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS 117 (257)
T ss_dssp HHH-------HHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CCC-------CHHHHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence 776 4444456654 469999999987645678999999999999999988642 24579999999887
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
+...... + +.+.. ... .+.+.......+.. .......|+.||+..|.+++..
T Consensus 118 ~~~~~~~----------~-~~~~~--~~~----------~~~~~~~~~~~~~~-----~~~~~~~Y~~sK~a~~~~~~~l 169 (257)
T 1fjh_A 118 AHLAFDK----------N-PLALA--LEA----------GEEAKARAIVEHAG-----EQGGNLAYAGSKNALTVAVRKR 169 (257)
T ss_dssp GSSCGGG----------C-TTHHH--HHH----------TCHHHHHHHHHTCC-----TTHHHHHHHHHHHHHHHHHHHT
T ss_pred hcccccc----------c-hhhhh--hcc----------cchhhhhhhhhccc-----CCCCccHHHHHHHHHHHHHHHH
Confidence 7422100 0 00000 000 01111111000000 0012357999999999998765
Q ss_pred -----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 246 -----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 246 -----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
..++.+++++|+.|.++..... ... ........ .+ ......+++++|+|++++.++....
T Consensus 170 a~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~-----~~~~~~~~----~~---~~~~~~~~~~~dvA~~~~~l~~~~~ 234 (257)
T 1fjh_A 170 AAAWGEAGVRLNTIAPGATETPLLQAG---LQD-----PRYGESIA----KF---VPPMGRRAEPSEMASVIAFLMSPAA 234 (257)
T ss_dssp HHHHHHTTCEEEEEEECC---------------------------------C---CCSTTSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHHhhcCeEEEEEeeCCCCCccchhh---ccc-----hhHHHHHH----hc---ccccCCCCCHHHHHHHHHHHhCchh
Confidence 3589999999999987643211 000 00000000 00 0111246889999999998886432
Q ss_pred CCCCCCceEEeccC
Q 008315 321 KQPSDANIYHVGSS 334 (570)
Q Consensus 321 ~~~~~~~iyn~~s~ 334 (570)
. ...++++++.++
T Consensus 235 ~-~~tG~~~~vdgG 247 (257)
T 1fjh_A 235 S-YVHGAQIVIDGG 247 (257)
T ss_dssp T-TCCSCEEEESTT
T ss_pred c-CCcCCEEEECCC
Confidence 2 234788998876
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=8.2e-15 Score=147.67 Aligned_cols=237 Identities=14% Similarity=0.117 Sum_probs=152.5
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc----------HHHHHHHHHhhhhhHHHHHhhhcc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES----------AALRFQNEVLAKDLFNVLKEKWGT 77 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~----------~~~rl~~~l~~~~~f~~l~~~~~~ 77 (570)
.-++||+++||||+|+||++++++|++.|.. |+++.|++.... ..+++. ++. +.++..
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~--- 74 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGAD---IIAVDICKPIRAGVVDTAIPASTPEDLA-ETA-----DLVKGH--- 74 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCSBTTBCCCSSCCCCHHHHH-HHH-----HHHHTT---
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCe---EEEEeccccccccccccccccCCHHHHH-HHH-----HHHhhc---
Confidence 3468999999999999999999999999964 577777632110 112222 111 111111
Q ss_pred cccccccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHH
Q 008315 78 RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD--------ERYDVAFGINTLGAI 142 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~ 142 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.
T Consensus 75 ------~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 141 (286)
T 3uve_A 75 ------NRRIVTAEVDVRD-------YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW 141 (286)
T ss_dssp ------TCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ------CCceEEEEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHH
Confidence 2578999999995 333344443 799999999975321 346778999999999
Q ss_pred HHHHHHHHc----cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcc
Q 008315 143 HLVNFAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 143 ~ll~~a~~~----~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
++++++... +.-.++|++||...+...
T Consensus 142 ~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------------------------------- 172 (286)
T 3uve_A 142 KTVKAGVPHMIAGGRGGSIILTSSVGGLKAY------------------------------------------------- 172 (286)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------------------------------------------------
T ss_pred HHHHHHHHHHHhCCCCcEEEEECchhhccCC-------------------------------------------------
Confidence 999988653 124589999998765321
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCC---ccccc--cchHHHHHHHhcCC
Q 008315 219 TERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPG---WVEDL--KTINALFVASAQGN 288 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~g---w~~~~--~~~~~~i~~~~~G~ 288 (570)
.....|+.||+..+.+.+.. ..++.+..++|+.|.++....... +.... ...... ..... .
T Consensus 173 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~ 243 (286)
T 3uve_A 173 -------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDM-APICQ-M 243 (286)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH-HHHHH-T
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhH-HHHHH-h
Confidence 12457999999999888754 457999999999998765421100 00000 000000 00000 0
Q ss_pred CceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 289 LPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 289 ~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.... . ..+...+|+|++++.++..... --.|+++++.+|
T Consensus 244 ~~~~-----p-~r~~~p~dvA~~v~fL~s~~a~-~itG~~i~vdGG 282 (286)
T 3uve_A 244 FHTL-----P-IPWVEPIDISNAVLFFASDEAR-YITGVTLPIDAG 282 (286)
T ss_dssp TCSS-----S-CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred hhcc-----C-CCcCCHHHHHHHHHHHcCcccc-CCcCCEEeECCc
Confidence 0011 1 3567899999999998864332 234889999887
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.9e-15 Score=149.53 Aligned_cols=201 Identities=16% Similarity=0.175 Sum_probs=138.1
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-+.+|+||||||+|+||++++++|+++|.. |+++.|+. ++++ .....++.
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~---V~~~~r~~------~~~~---------------------~~~~~~~~ 62 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHP---LLLLARRV------ERLK---------------------ALNLPNTL 62 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCH------HHHH---------------------TTCCTTEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHH---------------------HhhcCCce
Confidence 357899999999999999999999999975 46777753 1221 01124688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 63 ~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 135 (266)
T 3p19_A 63 CAQVDVTD-------KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA 135 (266)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 99999995 333344443 799999999976431 346778999999999988877431
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 136 ~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y 159 (266)
T 3p19_A 136 RNCGTIINISSIAGKKTF--------------------------------------------------------PDHAAY 159 (266)
T ss_dssp HTCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cCCcEEEEEcChhhCCCC--------------------------------------------------------CCCchH
Confidence 255799999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..++|+.|.++...... .. .......... . ....++.++
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~--~~~~~~~~~~------~-----~~~r~~~pe 223 (266)
T 3p19_A 160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT---SQ--QIKDGYDAWR------V-----DMGGVLAAD 223 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS---CH--HHHHHHHHHH------H-----HTTCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc---ch--hhhHHHHhhc------c-----cccCCCCHH
Confidence 99999999887754 45899999999999876432111 00 0001111100 0 112367899
Q ss_pred HHHHHHHHHHHH
Q 008315 307 MVVNAMIVAMVA 318 (570)
Q Consensus 307 dva~aii~a~~~ 318 (570)
|+|++++.++..
T Consensus 224 dvA~av~~l~~~ 235 (266)
T 3p19_A 224 DVARAVLFAYQQ 235 (266)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHcC
Confidence 999999998873
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-15 Score=147.38 Aligned_cols=216 Identities=13% Similarity=0.114 Sum_probs=144.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||||+||++++++|+++|. +|+++.|+... +.+++ .+.++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~---~V~~~~r~~~~------~~~~~-----------------------~~~~~~ 49 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY---RVAIASRNPEE------AAQSL-----------------------GAVPLP 49 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCHH------HHHHH-----------------------TCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH------HHHhh-----------------------CcEEEe
Confidence 68999999999999999999999995 46788886532 11110 257889
Q ss_pred ccCCCCCCCCChhhhHHH---HhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceEEE
Q 008315 92 GDISSEDLGLKDSNLKEE---LWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKVFV 158 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~---l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV 158 (570)
+|+++.+ .....+. ...++|++||+||..... +.++..+++|+.|+.++++.+... .+..++|
T Consensus 50 ~D~~~~~----~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv 125 (239)
T 2ekp_A 50 TDLEKDD----PKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVL 125 (239)
T ss_dssp CCTTTSC----HHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCchHH----HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 9999511 1122222 234799999999975321 346778999999999999988532 2568999
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||...+.... . .....|+.||+..
T Consensus 126 ~isS~~~~~~~~-------~-----------------------------------------------~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 126 FIGSVTTFTAGG-------P-----------------------------------------------VPIPAYTTAKTAL 151 (239)
T ss_dssp EECCGGGTSCCT-------T-----------------------------------------------SCCHHHHHHHHHH
T ss_pred EECchhhccCCC-------C-----------------------------------------------CCCccHHHHHHHH
Confidence 999987764320 0 1245799999999
Q ss_pred HHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 239 EMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
|.+.+.. ..+++++++||+.|.++..... .........+... . ....+...+|+|++++
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~-~--------p~~~~~~~~dvA~~~~ 215 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-------RQNPELYEPITAR-I--------PMGRWARPEEIARVAA 215 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHTT-C--------TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-------ccCHHHHHHHHhc-C--------CCCCCcCHHHHHHHHH
Confidence 9988764 3489999999999987543110 0001111111111 1 1123678999999999
Q ss_pred HHHHHhcCCCCCCceEEeccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++.... ..-.++++++.++
T Consensus 216 ~l~s~~~-~~~tG~~~~vdgG 235 (239)
T 2ekp_A 216 VLCGDEA-EYLTGQAVAVDGG 235 (239)
T ss_dssp HHTSGGG-TTCCSCEEEESTT
T ss_pred HHcCchh-cCCCCCEEEECCC
Confidence 8875332 2234788988776
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-14 Score=147.62 Aligned_cols=236 Identities=15% Similarity=0.141 Sum_probs=152.2
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc------cHHHHHHHHHhhhhhHHHHHhhhcccccc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE------SAALRFQNEVLAKDLFNVLKEKWGTRLNS 81 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~------~~~~rl~~~l~~~~~f~~l~~~~~~~~~~ 81 (570)
.-++||+++||||+|+||++++++|++.|.. |+++.|++... ...+++.+ .. +.++..
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~---V~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~------- 87 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGAD---IIAIDVCKQLDGVKLPMSTPDDLAE-TV-----RQVEAL------- 87 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEECCSCCTTCCSCCCCHHHHHH-HH-----HHHHHT-------
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEecccccccccccccCHHHHHH-HH-----HHHHhc-------
Confidence 3468999999999999999999999999964 57777763211 00122221 10 111111
Q ss_pred cccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHH
Q 008315 82 FISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~ 146 (570)
..++.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++
T Consensus 88 --~~~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 158 (299)
T 3t7c_A 88 --GRRIIASQVDVRD-------FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITAR 158 (299)
T ss_dssp --TCCEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred --CCceEEEECCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence 2578999999995 333344443 799999999975421 3467789999999999999
Q ss_pred HHHHc----cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 147 FAKKC----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 147 ~a~~~----~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++... ++-.++|++||...+...
T Consensus 159 ~~~~~~~~~~~~g~Iv~isS~~~~~~~----------------------------------------------------- 185 (299)
T 3t7c_A 159 VAIPHIMAGKRGGSIVFTSSIGGLRGA----------------------------------------------------- 185 (299)
T ss_dssp HHHHHHHHTTSCEEEEEECCGGGTSCC-----------------------------------------------------
T ss_pred HHHHHHHhcCCCcEEEEECChhhccCC-----------------------------------------------------
Confidence 87542 235789999998765321
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCc---cccc--cchHHHHHHH-hcCCCce
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGW---VEDL--KTINALFVAS-AQGNLPC 291 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw---~~~~--~~~~~~i~~~-~~G~~~~ 291 (570)
.....|+.||+..+.+.+.. ..++.+..|+|+.|.++.....+.+ .... .......... ....
T Consensus 186 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 259 (299)
T 3t7c_A 186 ---ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV--- 259 (299)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS---
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc---
Confidence 12457999999999888754 3489999999999987654211100 0000 0000000000 0000
Q ss_pred eecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 292 LVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+ ..+...+|+|++++.++..... --.|+++++.+|
T Consensus 260 ~p------~r~~~pedvA~~v~fL~s~~a~-~itG~~i~vdGG 295 (299)
T 3t7c_A 260 LP------IPYVEPADISNAILFLVSDDAR-YITGVSLPVDGG 295 (299)
T ss_dssp SS------CSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cC------cCCCCHHHHHHHHHHHhCcccc-cCcCCEEeeCCC
Confidence 11 2467899999999998864332 234889999887
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-15 Score=149.13 Aligned_cols=203 Identities=10% Similarity=0.052 Sum_probs=131.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|+++|. +|+++.|+..... .+.+++ ++. ..++.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~---~~~~~~---------~~~---------~~~~~~ 60 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF---TVFAGRRNGEKLA---PLVAEI---------EAA---------GGRIVA 60 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC---EEEEEESSGGGGH---HHHHHH---------HHT---------TCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHH---HHHHHH---------Hhc---------CCeEEE
Confidence 5799999999999999999999999996 4678888654322 122111 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++... .+
T Consensus 61 ~~~Dv~~-------~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 133 (252)
T 3h7a_A 61 RSLDARN-------EDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG 133 (252)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EECcCCC-------HHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 333345544 689999999975431 346778999999999999887432 14
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 134 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 157 (252)
T 3h7a_A 134 QGKIFFTGATASLRGG--------------------------------------------------------SGFAAFAS 157 (252)
T ss_dssp CEEEEEEEEGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred CcEEEEECCHHHcCCC--------------------------------------------------------CCCccHHH
Confidence 4689999998764321 12467999
Q ss_pred HHHHHHHHHHHh-----cCCCcE-EEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSL-VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~-~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
||+..+.+.+.. ..++.+ .++.|+.|..+..... .. .... . ........ ++..+|
T Consensus 158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~------~~~~--------~-~~~~~~~~-~~~ped 218 (252)
T 3h7a_A 158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---RE------QMFG--------K-DALANPDL-LMPPAA 218 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------------CCHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---ch------hhhh--------h-hhhcCCcc-CCCHHH
Confidence 999999888764 457899 8999999876533211 00 0000 0 01111122 789999
Q ss_pred HHHHHHHHHHH
Q 008315 308 VVNAMIVAMVA 318 (570)
Q Consensus 308 va~aii~a~~~ 318 (570)
+|++++.++..
T Consensus 219 vA~~~~~l~s~ 229 (252)
T 3h7a_A 219 VAGAYWQLYQQ 229 (252)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999998863
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=1e-15 Score=153.84 Aligned_cols=215 Identities=10% Similarity=0.057 Sum_probs=146.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|+||++++++|++.|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~---~Vi~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 80 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGL---GVVIADLAAEK---GKALA-------------DEL--------GNRAEF 80 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------CTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCChHH---HHHHH-------------HHh--------CCceEE
Confidence 5899999999999999999999999996 45777775321 11111 111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCC-c---------c---cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITK-F---------D---ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~-f---------~---~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
+.+|+++ .+..+.+++ .+|++||+||... . . +.++..+++|+.|+.++++++..
T Consensus 81 ~~~Dl~~-------~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 153 (281)
T 3ppi_A 81 VSTNVTS-------EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAA 153 (281)
T ss_dssp EECCTTC-------HHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999995 333344443 5899999955321 1 1 22678899999999999998864
Q ss_pred c---------cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccc
Q 008315 151 C---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTER 221 (570)
Q Consensus 151 ~---------~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 221 (570)
. .+-.++|++||...+...
T Consensus 154 ~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------------------------------------------- 181 (281)
T 3ppi_A 154 SIAAAEPRENGERGALVLTASIAGYEGQ---------------------------------------------------- 181 (281)
T ss_dssp HHHTSCCCTTSCCEEEEEECCGGGTSCC----------------------------------------------------
T ss_pred HHHhhcccccCCCeEEEEEecccccCCC----------------------------------------------------
Confidence 2 133589999998765321
Q ss_pred cccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCC
Q 008315 222 AKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 222 ~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~ 296 (570)
.....|+.||+..+.+.+.. ..++.+..++|+.|..+..... .......+..+..
T Consensus 182 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---------~~~~~~~~~~~~~------- 241 (281)
T 3ppi_A 182 ----IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---------GEEALAKFAANIP------- 241 (281)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---------CHHHHHHHHHTCC-------
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---------cHHHHHHHHhcCC-------
Confidence 12467999999888877654 4579999999999876432111 0111222222111
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
....++.++|+|++++.++.. ....|+++++.++
T Consensus 242 -~~~~~~~pedvA~~v~~l~s~---~~~tG~~i~vdGG 275 (281)
T 3ppi_A 242 -FPKRLGTPDEFADAAAFLLTN---GYINGEVMRLDGA 275 (281)
T ss_dssp -SSSSCBCHHHHHHHHHHHHHC---SSCCSCEEEESTT
T ss_pred -CCCCCCCHHHHHHHHHHHHcC---CCcCCcEEEECCC
Confidence 013467899999999998863 2334889999887
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-15 Score=148.87 Aligned_cols=234 Identities=15% Similarity=0.135 Sum_probs=150.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||+|+||++++++|++.|. +|+++.|+.... +... +.++...+ ..++.+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~~---~~~~---------~~l~~~~~-------~~~~~~ 65 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA---NVLINGRREENV---NETI---------KEIRAQYP-------DAILQP 65 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSHHHH---HHHH---------HHHHHHCT-------TCEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHhhCC-------CceEEE
Confidence 5899999999999999999999999996 457777764221 1111 12222221 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~ 156 (570)
+.+|+++ ++..+.+++ ++|++||+||..... +.++..+++|+.|+..+++.+... .+..+
T Consensus 66 ~~~D~~~-------~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~ 138 (267)
T 3t4x_A 66 VVADLGT-------EQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGR 138 (267)
T ss_dssp EECCTTS-------HHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEE
T ss_pred EecCCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCE
Confidence 9999995 333445544 799999999975431 346677999999988887776442 25578
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|++||...+... .....|+.||+
T Consensus 139 iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 162 (267)
T 3t4x_A 139 VIFIASEAAIMPS--------------------------------------------------------QEMAHYSATKT 162 (267)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred EEEEcchhhccCC--------------------------------------------------------CcchHHHHHHH
Confidence 9999998765321 12467999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-Cccccc-cchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVEDL-KTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
..+.+.+.. ..++.+..+.|+.|.++..+... ....+. ............... .......+..++|+|
T Consensus 163 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~r~~~pedvA 237 (267)
T 3t4x_A 163 MQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR-----PTSIIQRLIRPEEIA 237 (267)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC-----TTCSSCSCBCTHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC-----CcccccCccCHHHHH
Confidence 999988765 34799999999998764211000 000000 000011111111000 001223578899999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++..... --.|+++++.+|
T Consensus 238 ~~v~fL~s~~~~-~itG~~i~vdGG 261 (267)
T 3t4x_A 238 HLVTFLSSPLSS-AINGSALRIDGG 261 (267)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHcCcccc-CccCCeEEECCC
Confidence 999988764332 234889999887
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-15 Score=150.24 Aligned_cols=222 Identities=13% Similarity=0.138 Sum_probs=147.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++.|.. |+++.+..... .+...+++ ++. ..++.+
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~---v~~~~~~~~~~--~~~~~~~~---------~~~---------~~~~~~ 61 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGAL---VAIHYGNRKEE--AEETVYEI---------QSN---------GGSAFS 61 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCSHH--HHHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCchHH--HHHHHHHH---------Hhc---------CCceEE
Confidence 68999999999999999999999999964 45554443221 11111111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++.+.
T Consensus 62 ~~~D~~~-------~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 134 (255)
T 3icc_A 62 IGANLES-------LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQAL 134 (255)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred EecCcCC-------HHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHH
Confidence 9999995 332333332 399999999975321 3356778999999999999987
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|++||....... ...
T Consensus 135 ~~~~~~~~iv~isS~~~~~~~--------------------------------------------------------~~~ 158 (255)
T 3icc_A 135 SRLRDNSRIINISSAATRISL--------------------------------------------------------PDF 158 (255)
T ss_dssp TTEEEEEEEEEECCGGGTSCC--------------------------------------------------------TTB
T ss_pred HhhCCCCEEEEeCChhhccCC--------------------------------------------------------CCc
Confidence 53 234589999998765321 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..++|+.|..+....... . .......... .....+.
T Consensus 159 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~----~~~~~~~~~~---------~~~~~~~ 222 (255)
T 3icc_A 159 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS---D----PMMKQYATTI---------SAFNRLG 222 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT---S----HHHHHHHHHT---------STTSSCB
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc---c----HHHHHhhhcc---------CCcCCCC
Confidence 67999999999988754 458999999999998765432211 1 1111111111 1123456
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++|+|++++.++.... ..-.|+++++.+|
T Consensus 223 ~~~dva~~~~~l~s~~~-~~~tG~~i~vdgG 252 (255)
T 3icc_A 223 EVEDIADTAAFLASPDS-RWVTGQLIDVSGG 252 (255)
T ss_dssp CHHHHHHHHHHHHSGGG-TTCCSCEEEESSS
T ss_pred CHHHHHHHHHHHhCccc-CCccCCEEEecCC
Confidence 78999999988875332 2234889999876
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-15 Score=150.83 Aligned_cols=223 Identities=13% Similarity=0.116 Sum_probs=147.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|+++|. +|+++.|+...... +.+++. .. ..++.+
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~---~~~~~~---------~~---------~~~~~~ 86 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA---HVILHGVKPGSTAA---VQQRII---------AS---------GGTAQE 86 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSTTTTHH---HHHHHH---------HT---------TCCEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCHHHHHH---HHHHHH---------hc---------CCeEEE
Confidence 5899999999999999999999999996 46788887654322 111111 10 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|++++ +..+.++ ..+|++||+||..... +.++..+++|+.|+.++++++... .+
T Consensus 87 ~~~Dv~~~-------~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 159 (275)
T 4imr_A 87 LAGDLSEA-------GAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK 159 (275)
T ss_dssp EECCTTST-------THHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCH-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 99999964 2223333 3799999999975321 346778999999999999988432 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||...+... .....|+.
T Consensus 160 ~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 183 (275)
T 4imr_A 160 WGRVVSIGSINQLRPK--------------------------------------------------------SVVTAYAA 183 (275)
T ss_dssp CEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHH
T ss_pred CcEEEEECCHHhCCCC--------------------------------------------------------CCchhhHH
Confidence 5789999998765311 12356999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++.+..++|+.|..+..... . ............... ...-+...+|+
T Consensus 184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~---~~~~~~~~~~~~~~~--------p~~r~~~pedv 249 (275)
T 4imr_A 184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR---R---AQDPEGWDEYVRTLN--------WMGRAGRPEEM 249 (275)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH---H---HHCHHHHHHHHHHHS--------TTCSCBCGGGG
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc---c---ccChHHHHHHHhhcC--------ccCCCcCHHHH
Confidence 999999888754 3489999999999976432100 0 000011111111000 01124567899
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|++++.++..... --.|+++++.+|
T Consensus 250 A~~v~fL~s~~a~-~itG~~i~vdGG 274 (275)
T 4imr_A 250 VGAALFLASEACS-FMTGETIFLTGG 274 (275)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESSC
T ss_pred HHHHHHHcCcccC-CCCCCEEEeCCC
Confidence 9999988864332 234788988765
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-15 Score=148.81 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=141.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|+||||||+||++++++|+++|. +|+++.|+.... .....+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~-------------------------------~~~~~~ 50 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW---WVASIDVVENEE-------------------------------ASASVI 50 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSCCTT-------------------------------SSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC---EEEEEeCChhhc-------------------------------cCCcEE
Confidence 4689999999999999999999999985 467888875431 123567
Q ss_pred EEccCCCCCCCCChhhhHHHHh---------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW---------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|+++ .+..+.++ .++|++||+||.... . +.++..+++|+.|+..+++++...
T Consensus 51 ~~~D~~~-------~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 123 (241)
T 1dhr_A 51 VKMTDSF-------TEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 123 (241)
T ss_dssp CCCCSCH-------HHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 8899994 44333443 379999999997531 1 345677899999999999998763
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||...+... .....|
T Consensus 124 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 147 (241)
T 1dhr_A 124 KEGGLLTLAGAKAALDGT--------------------------------------------------------PGMIGY 147 (241)
T ss_dssp EEEEEEEEECCGGGGSCC--------------------------------------------------------TTBHHH
T ss_pred ccCCEEEEECCHHHccCC--------------------------------------------------------CCchHH
Confidence 222589999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+.+.. ..++.+++++|+.|-.+.. ...... ......+|
T Consensus 148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-----------------~~~~~~---------~~~~~~~~ 201 (241)
T 1dhr_A 148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------------RKSMPE---------ADFSSWTP 201 (241)
T ss_dssp HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------------HHHSTT---------SCGGGSEE
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-----------------cccCcc---------hhhccCCC
Confidence 99999999998865 2368999999998755311 000000 11124578
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+++|++++.++.... ....++++++.++
T Consensus 202 ~~~vA~~v~~l~~~~~-~~~~G~~~~v~g~ 230 (241)
T 1dhr_A 202 LEFLVETFHDWITGNK-RPNSGSLIQVVTT 230 (241)
T ss_dssp HHHHHHHHHHHHTTTT-CCCTTCEEEEEEE
T ss_pred HHHHHHHHHHHhcCCC-cCccceEEEEeCC
Confidence 8999999988875322 2234778888765
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=153.82 Aligned_cols=211 Identities=16% Similarity=0.184 Sum_probs=125.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|++ |. .|+++.|+... .+.+. + ..++.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~---~v~~~~r~~~~---~~~~~-------------~----------~~~~~~ 52 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DH---IVYALGRNPEH---LAALA-------------E----------IEGVEP 52 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TS---EEEEEESCHHH---HHHHH-------------T----------STTEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CC---eEEEEeCCHHH---HHHHH-------------h----------hcCCcc
Confidence 4689999999999999999999987 64 56788775321 11111 0 246888
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cCceEEEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VKLKVFVHV 160 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~lk~fV~v 160 (570)
+.+|++++..--...+.. .-..++|+|||+||..... +.++..+++|+.|+..+++.+... ++-.++|++
T Consensus 53 ~~~D~~~~~~~~~~~~~~-~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~i 131 (245)
T 3e9n_A 53 IESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYI 131 (245)
T ss_dssp EECCHHHHHHTSSSCGGG-TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred eecccchHHHHHHHHHHH-HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 999998531100000111 1123699999999986432 346677999999998888877542 112689999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||...+... .....|+.||+..|.
T Consensus 132 sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a~~~ 155 (245)
T 3e9n_A 132 NSGAGNGPH--------------------------------------------------------PGNTIYAASKHALRG 155 (245)
T ss_dssp C------------------------------------------------------------------CHHHHHHHHHHHH
T ss_pred cCcccccCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 998765421 124679999999999
Q ss_pred HHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHH
Q 008315 241 IMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVA 315 (570)
Q Consensus 241 ~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a 315 (570)
+++.. ..++.+.+++|+.|.++..... .+. .. .......++.++|+|++++.+
T Consensus 156 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~----------~~---------~~~~~~~~~~p~dvA~~i~~l 213 (245)
T 3e9n_A 156 LADAFRKEEANNGIRVSTVSPGPTNTPMLQGL---MDS----------QG---------TNFRPEIYIEPKEIANAIRFV 213 (245)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCeEEEEEecCCccCchhhhh---hhh----------hh---------cccccccCCCHHHHHHHHHHH
Confidence 88765 3579999999999987643211 000 00 001123467899999999998
Q ss_pred HHHhcCCCCCCceEEecc
Q 008315 316 MVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 316 ~~~~~~~~~~~~iyn~~s 333 (570)
+.. +..+.+||+.-
T Consensus 214 ~~~----~~~~~~~~i~~ 227 (245)
T 3e9n_A 214 IDA----GETTQITNVDV 227 (245)
T ss_dssp HTS----CTTEEEEEEEE
T ss_pred HcC----CCccceeeeEE
Confidence 852 22367888753
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-14 Score=144.16 Aligned_cols=232 Identities=10% Similarity=0.046 Sum_probs=149.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+. +.++.+.+ ..++.+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~---------~~l~~~~~-------~~~~~~ 63 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA---AVAFCARDGER---LRAAE---------SALRQRFP-------GARLFA 63 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH---------HHHHHHST-------TCCEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH---------HHHHHhcC-------CceEEE
Confidence 5799999999999999999999999996 45777875322 11111 11222221 235899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 64 ~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 136 (265)
T 3lf2_A 64 SVCDVLD-------ALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR 136 (265)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999995 33333443 368999999997543 1346778999999999999988652 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 137 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (265)
T 3lf2_A 137 ADAAIVCVNSLLASQPE--------------------------------------------------------PHMVATS 160 (265)
T ss_dssp TTEEEEEEEEGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred CCeEEEEECCcccCCCC--------------------------------------------------------CCchhhH
Confidence 34689999998765321 1246799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcc-ccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWV-EDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~-~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+.. ..++.+..++|+.|.++......... +.......+....... .......+...+
T Consensus 161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~p~~r~~~pe 233 (265)
T 3lf2_A 161 AARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN-------KQIPLGRLGKPI 233 (265)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH-------TTCTTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc-------cCCCcCCCcCHH
Confidence 9999999988754 45899999999999764321100000 0000011111111110 001122467789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... --.|+++++.+|
T Consensus 234 dvA~~v~fL~s~~~~-~itG~~i~vdGG 260 (265)
T 3lf2_A 234 EAARAILFLASPLSA-YTTGSHIDVSGG 260 (265)
T ss_dssp HHHHHHHHHHSGGGT-TCCSEEEEESSS
T ss_pred HHHHHHHHHhCchhc-CcCCCEEEECCC
Confidence 999999988864332 234889999876
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.6e-15 Score=150.47 Aligned_cols=201 Identities=13% Similarity=0.115 Sum_probs=131.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||+|+||++++++|+++|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 78 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY---GVALAGRRLDA---LQETA-------------AEI--------GDDALC 78 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------TSCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HHh--------CCCeEE
Confidence 4789999999999999999999999996 45777775321 11111 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~-~- 152 (570)
+.+|+++ .+..+.+++ .+|++||+||.... . +.++..+++|+.|+..+++++... .
T Consensus 79 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~ 151 (272)
T 4dyv_A 79 VPTDVTD-------PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKA 151 (272)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 9999995 333345544 79999999997532 1 346778999999999998877543 1
Q ss_pred -C--ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 153 -K--LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 153 -~--lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
+ -.++|++||...+... ....
T Consensus 152 ~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~ 175 (272)
T 4dyv_A 152 QEPRGGRIINNGSISATSPR--------------------------------------------------------PYSA 175 (272)
T ss_dssp SSSCCEEEEEECCSSTTSCC--------------------------------------------------------TTCH
T ss_pred CCCCCcEEEEECchhhcCCC--------------------------------------------------------CCch
Confidence 1 3689999998765321 1246
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++.+..++|+.|..+..+... +. ..... .......+..
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~--------------~~~~~--~~~~~~~~~~ 236 (272)
T 4dyv_A 176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK---AG--------------VPQAD--LSIKVEPVMD 236 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------------C
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc---cc--------------chhhh--hcccccCCCC
Confidence 7999999999988764 35899999999999875432111 00 00000 0011234678
Q ss_pred HHHHHHHHHHHHHHh
Q 008315 305 VDMVVNAMIVAMVAH 319 (570)
Q Consensus 305 VDdva~aii~a~~~~ 319 (570)
++|+|++++.++..+
T Consensus 237 pedvA~~v~fL~s~~ 251 (272)
T 4dyv_A 237 VAHVASAVVYMASLP 251 (272)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998744
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.7e-15 Score=146.98 Aligned_cols=191 Identities=10% Similarity=0.102 Sum_probs=130.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|++|+||||||+|+||++++++|++.|. +|+++.|+... .+.+. ++. ..++.+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~ 53 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGH---QVSMMGRRYQR---LQQQE-------------LLL--------GNAVIG 53 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------GGGEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------HHh--------cCCceE
Confidence 3579999999999999999999999995 46788886321 11111 111 135889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc--cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--~~ 153 (570)
+.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+++++... .+
T Consensus 54 ~~~D~~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 126 (235)
T 3l6e_A 54 IVADLAH-------HEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER 126 (235)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334443 68999999998543 1446778999999999999988543 11
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|++||....... .....|+.
T Consensus 127 ~~~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 150 (235)
T 3l6e_A 127 GGVLANVLSSAAQVGK--------------------------------------------------------ANESLYCA 150 (235)
T ss_dssp CEEEEEECCEECCSSC--------------------------------------------------------SSHHHHHH
T ss_pred CCEEEEEeCHHhcCCC--------------------------------------------------------CCCcHHHH
Confidence 2389999997654321 11357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++.+..++|+.|-.+..... .. .....+...+|+
T Consensus 151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~--------------------~~~~~~~~pedv 203 (235)
T 3l6e_A 151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT-------DH--------------------VDPSGFMTPEDA 203 (235)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc-------CC--------------------CCCcCCCCHHHH
Confidence 999999988764 4579999999999866432110 00 011146789999
Q ss_pred HHHHHHHHH
Q 008315 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 204 A~~v~~l~~ 212 (235)
T 3l6e_A 204 AAYMLDALE 212 (235)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998874
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-15 Score=162.28 Aligned_cols=223 Identities=20% Similarity=0.146 Sum_probs=151.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+-.+++||||||||+||.+++++|++.|. .+|+++.|+.......+.+.+++. . . ..++.
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l~---------~-~--------g~~v~ 282 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAELE---------A-L--------GARTT 282 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHHH---------H-T--------TCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCC--CEEEEEcCCCCCcHHHHHHHHHHH---------h-c--------CCEEE
Confidence 55789999999999999999999999986 357888897643322223222221 1 0 25789
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCC------ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCce
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNE------LDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKLK 155 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~------vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk 155 (570)
++.+|+++ .+..+.++++ +|+|||+||..... +.++..+++|+.|+.++.+++... ++.
T Consensus 283 ~~~~Dv~d-------~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~ 354 (486)
T 2fr1_A 283 VAACDVTD-------RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLT 354 (486)
T ss_dssp EEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCS
T ss_pred EEEeCCCC-------HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCC
Confidence 99999994 4444566655 59999999986431 345677899999999999999887 789
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
+||++||........ ....|+.+|
T Consensus 355 ~~V~~SS~a~~~g~~--------------------------------------------------------g~~~Yaaak 378 (486)
T 2fr1_A 355 AFVLFSSFASAFGAP--------------------------------------------------------GLGGYAPGN 378 (486)
T ss_dssp EEEEEEEHHHHTCCT--------------------------------------------------------TCTTTHHHH
T ss_pred EEEEEcChHhcCCCC--------------------------------------------------------CCHHHHHHH
Confidence 999999975532211 135799999
Q ss_pred HHHHHHHHHh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 236 TMGEMIMQQS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 236 ~~aE~~v~~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
+..+.+..+. ..++++++|+|+.+.+.. .... . . .. .+ ...-...++.+++++++..
T Consensus 379 a~l~~la~~~~~~gi~v~~i~pG~~~~~g------m~~~-----~-~----~~---~~---~~~g~~~i~~e~~a~~l~~ 436 (486)
T 2fr1_A 379 AYLDGLAQQRRSDGLPATAVAWGTWAGSG------MAEG-----P-V----AD---RF---RRHGVIEMPPETACRALQN 436 (486)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCBC-------------------------------C---TTTTEECBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEECCeeCCCc------ccch-----h-H----HH---HH---HhcCCCCCCHHHHHHHHHH
Confidence 9999988765 568999999999886541 1110 0 0 00 00 0122467999999999999
Q ss_pred HHHHhcCCCCCCceEEeccCCCCcccHHhHHHHH
Q 008315 315 AMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYG 348 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~ 348 (570)
++.... .. +.+ .++.|..+....
T Consensus 437 ~l~~~~-----~~-~~v-----~~~d~~~~~~~~ 459 (486)
T 2fr1_A 437 ALDRAE-----VC-PIV-----IDVRWDRFLLAY 459 (486)
T ss_dssp HHHTTC-----SS-CEE-----CEECHHHHHHHH
T ss_pred HHhCCC-----Ce-EEE-----EeCCHHHHhhhh
Confidence 886321 12 222 236787776544
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.66 E-value=8.4e-15 Score=147.58 Aligned_cols=198 Identities=15% Similarity=0.182 Sum_probs=135.1
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+|+||||||+||++++++|++.|+ +|+++.|+... .+.+.++ +++. + ..++
T Consensus 24 ~~~~~k~vlITGasggIG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~-~-------~~~~ 80 (286)
T 1xu9_A 24 EMLQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKET---LQKVVSH---------CLEL-G-------AASA 80 (286)
T ss_dssp GGGTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHH-T-------CSEE
T ss_pred hhcCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHHh-C-------CCce
Confidence 346899999999999999999999999995 46788886422 1121111 1111 1 1368
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEc-CccCCc------ccCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNS-AAITKF------DERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~-Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
.++.+|+++ .+..+.+++ ++|+|||+ |+.... .+.++..+++|+.|+.++++++...
T Consensus 81 ~~~~~Dl~d-------~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~ 153 (286)
T 1xu9_A 81 HYIAGTMED-------MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK 153 (286)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 899999995 332334433 79999999 454322 1335677999999999999988653
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++..++|++||...+... .....|
T Consensus 154 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 177 (286)
T 1xu9_A 154 QSNGSIVVVSSLAGKVAY--------------------------------------------------------PMVAAY 177 (286)
T ss_dssp HHTCEEEEEEEGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred HCCCEEEEECCcccccCC--------------------------------------------------------CCccHH
Confidence 123689999998765321 124679
Q ss_pred HHHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..|.+++.. ..++.+++++|+.|.++.. .....+ ......++
T Consensus 178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-----------------~~~~~~---------~~~~~~~~ 231 (286)
T 1xu9_A 178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-----------------MKAVSG---------IVHMQAAP 231 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-----------------HHHSCG---------GGGGGCBC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-----------------HHhccc---------cccCCCCC
Confidence 99999999887653 3478999999998865321 000001 11234688
Q ss_pred HHHHHHHHHHHHH
Q 008315 305 VDMVVNAMIVAMV 317 (570)
Q Consensus 305 VDdva~aii~a~~ 317 (570)
.+++|++++.++.
T Consensus 232 ~~~vA~~i~~~~~ 244 (286)
T 1xu9_A 232 KEECALEIIKGGA 244 (286)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998876
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-15 Score=152.52 Aligned_cols=225 Identities=15% Similarity=0.085 Sum_probs=147.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI-RAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+||||||+|+||+++++.|++.|+ +|+++. |+.. ..+.+.++ ++... ..++.
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~---~Vv~~~~r~~~---~~~~~~~~---------l~~~~--------~~~~~ 100 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAA---EANALSAT---------LNARR--------PNSAI 100 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH---HHHHHHHH---------HHHHS--------TTCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEcCCCHH---HHHHHHHH---------HHhhc--------CCeEE
Confidence 5789999999999999999999999996 456777 7532 11222211 21111 24688
Q ss_pred EEEccCCCCCC----------CCChhhhHHHHh-------CCccEEEEcCccCCc---------------------ccCH
Q 008315 89 FVAGDISSEDL----------GLKDSNLKEELW-------NELDVMVNSAAITKF---------------------DERY 130 (570)
Q Consensus 89 ~v~gDl~~~~l----------gls~~~~~~~l~-------~~vdiVih~Aa~v~f---------------------~~~~ 130 (570)
++.+|+++++- -..+....+.++ ..+|++||+||.... .+.+
T Consensus 101 ~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 180 (328)
T 2qhx_A 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 180 (328)
T ss_dssp EEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHH
T ss_pred EEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999997530 000000222333 379999999997532 2335
Q ss_pred HHHHHHHHHHHHHHHHHHHHc---cC------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhh
Q 008315 131 DVAFGINTLGAIHLVNFAKKC---VK------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELK 201 (570)
Q Consensus 131 ~~~~~~Nv~gt~~ll~~a~~~---~~------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~ 201 (570)
+..+++|+.|+..+++++... .+ ..++|++||...+...
T Consensus 181 ~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------- 228 (328)
T 2qhx_A 181 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 228 (328)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCC--------------------------------
Confidence 567899999999999988642 12 5789999998765321
Q ss_pred hcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccc
Q 008315 202 TKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKT 276 (570)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~ 276 (570)
.....|+.||+..+.+.+.. ..++.+.+|+|+.|.++. +..
T Consensus 229 ------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--------- 274 (328)
T 2qhx_A 229 ------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--------- 274 (328)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---------
T ss_pred ------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---------
Confidence 12357999999999988764 348999999999998764 211
Q ss_pred hHHHHHHHhcCCCceeecCCCcee-ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 277 INALFVASAQGNLPCLVGETKTIM-DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 277 ~~~~i~~~~~G~~~~~~~~~~~~~-d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
......+.... + .. -+...+|+|++++.++.... ..-.++++++.++
T Consensus 275 -~~~~~~~~~~~----p-----~~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG 322 (328)
T 2qhx_A 275 -PAVWEGHRSKV----P-----LYQRDSSAAEVSDVVIFLCSSKA-KYITGTCVKVDGG 322 (328)
T ss_dssp -HHHHHHHHTTC----T-----TTTSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred -HHHHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCccc-cCccCcEEEECCC
Confidence 11111221111 1 01 25678999999999886332 2234789998876
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.7e-15 Score=145.68 Aligned_cols=204 Identities=15% Similarity=0.193 Sum_probs=137.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.+++|+++||||||+||++++++|+++|+ +|+++.|+... .+.+.++ ++.. ..++.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------l~~~---------~~~~~ 59 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA---AVAIAARRVEK---LRALGDE---------LTAA---------GAKVH 59 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhc---------CCcEE
Confidence 36899999999999999999999999996 45788886321 1222211 1111 24688
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
++.+|+++ .+..+.++ ..+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 60 ~~~~Dv~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 132 (247)
T 2jah_A 60 VLELDVAD-------RQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR 132 (247)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999995 33333443 3799999999975321 346778999999999999988642
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+ .++|++||...+... .....|
T Consensus 133 ~~-g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (247)
T 2jah_A 133 SK-GTVVQMSSIAGRVNV--------------------------------------------------------RNAAVY 155 (247)
T ss_dssp HT-CEEEEECCGGGTCCC--------------------------------------------------------TTCHHH
T ss_pred CC-CEEEEEccHHhcCCC--------------------------------------------------------CCCcHH
Confidence 14 699999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++++.+++|+.|.++.... +... ......... ++ ...++..+
T Consensus 156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~--~~~~~~~~~--------~~----~~~~~~pe 218 (247)
T 2jah_A 156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH---ITHT--ATKEMYEQR--------IS----QIRKLQAQ 218 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG---CCCH--HHHHHHHHH--------TT----TSCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc---ccch--hhHHHHHhc--------cc----ccCCCCHH
Confidence 99999888877654 458999999999997754311 1110 000111110 10 01147899
Q ss_pred HHHHHHHHHHH
Q 008315 307 MVVNAMIVAMV 317 (570)
Q Consensus 307 dva~aii~a~~ 317 (570)
|+|++++.++.
T Consensus 219 dvA~~v~~l~s 229 (247)
T 2jah_A 219 DIAEAVRYAVT 229 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999998886
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.65 E-value=3e-15 Score=150.92 Aligned_cols=216 Identities=14% Similarity=0.184 Sum_probs=144.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc----HHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES----AALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~----~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+++|+++||||+|+||++++++|+++|. +|+++.|+..... ..+...+++ +.. ..
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~---------~~~---------~~ 65 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA---NVALVAKSAEPHPKLPGTIYTAAKEI---------EEA---------GG 65 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHHH---------HHH---------TS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECChhhhhhhhHHHHHHHHHH---------Hhc---------CC
Confidence 5899999999999999999999999995 5688889765321 111111111 111 25
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++...
T Consensus 66 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 138 (285)
T 3sc4_A 66 QALPIVGDIRD-------GDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH 138 (285)
T ss_dssp EEEEEECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cEEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 78999999995 333344443 799999999976431 346777899999999999988653
Q ss_pred -c--CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 -V--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 -~--~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. +..++|++||........ ...
T Consensus 139 m~~~~~g~iv~isS~~~~~~~~-------------------------------------------------------~~~ 163 (285)
T 3sc4_A 139 MKGRDNPHILTLSPPIRLEPKW-------------------------------------------------------LRP 163 (285)
T ss_dssp TTTSSSCEEEECCCCCCCSGGG-------------------------------------------------------SCS
T ss_pred HHHcCCcEEEEECChhhccCCC-------------------------------------------------------CCC
Confidence 1 346899999976432110 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.+..+ .+........ .....+.
T Consensus 164 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t----------------~~~~~~~~~~--------~~~~r~~ 219 (285)
T 3sc4_A 164 TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT----------------AAVQNLLGGD--------EAMARSR 219 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC----------------HHHHHHHTSC--------CCCTTCB
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc----------------HHHHhhcccc--------ccccCCC
Confidence 67999999999988764 45899999999843221 1111111111 1122356
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+++|++++.++.... .-.++++.+.++
T Consensus 220 ~pedvA~~~~~l~s~~~--~~tG~~i~~dgg 248 (285)
T 3sc4_A 220 KPEVYADAAYVVLNKPS--SYTGNTLLCEDV 248 (285)
T ss_dssp CTHHHHHHHHHHHTSCT--TCCSCEEEHHHH
T ss_pred CHHHHHHHHHHHhCCcc--cccceEEEEcCc
Confidence 78999999998886332 223566655543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.64 E-value=7.9e-15 Score=147.98 Aligned_cols=223 Identities=15% Similarity=0.126 Sum_probs=145.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|. +|+++.|+.. ...+.+.++ ++.+. ..++.+
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~---~V~~~~r~~~--~~~~~~~~~---------l~~~~--------~~~~~~ 78 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGY---RVVIHYHNSA--EAAVSLADE---------LNKER--------SNTAVV 78 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTC---EEEEEESSCH--HHHHHHHHH---------HHHHS--------TTCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---eEEEEeCCch--HHHHHHHHH---------HHhhc--------CCceEE
Confidence 6899999999999999999999999995 4678888651 111222211 11111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------c---------cCHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------D---------ERYDVAFGINTLGAIHLV 145 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~---------~~~~~~~~~Nv~gt~~ll 145 (570)
+.+|++++.. ..+..+.++ ..+|+|||+||.... . +.++..+++|+.|+..++
T Consensus 79 ~~~Dv~~~~~---~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 155 (288)
T 2x9g_A 79 CQADLTNSNV---LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLT 155 (288)
T ss_dssp EECCCSCSTT---HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHH
T ss_pred EEeecCCccC---CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHH
Confidence 9999995210 033333333 379999999997532 1 234567899999999999
Q ss_pred HHHHHc-c--C------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhh
Q 008315 146 NFAKKC-V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKN 216 (570)
Q Consensus 146 ~~a~~~-~--~------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (570)
+.+... . + ..++|++||...+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------------- 188 (288)
T 2x9g_A 156 MSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPC----------------------------------------------- 188 (288)
T ss_dssp HHHHHHC--------CCCEEEEEECCTTTTSCC-----------------------------------------------
T ss_pred HHHHHHHhhcCCCCCCCCeEEEEEecccccCCC-----------------------------------------------
Confidence 988653 1 1 4689999998765321
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCce
Q 008315 217 LGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPC 291 (570)
Q Consensus 217 ~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~ 291 (570)
.....|+.||+..+.+.+.. ..++.+.+|+|+.|.++. . . .+ .....+....
T Consensus 189 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~---~~------~~~~~~~~~~--- 245 (288)
T 2x9g_A 189 ---------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M---GE------EEKDKWRRKV--- 245 (288)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S---CH------HHHHHHHHTC---
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c---Ch------HHHHHHHhhC---
Confidence 12357999999888877654 348999999999998864 2 1 01 1111111111
Q ss_pred eecCCCceeec-chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 292 LVGETKTIMDV-IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~-VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+ ...+ ...+++|++++.++.... ..-.+.++++.++
T Consensus 246 -p-----~~r~~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG 282 (288)
T 2x9g_A 246 -P-----LGRREASAEQIADAVIFLVSGSA-QYITGSIIKVDGG 282 (288)
T ss_dssp -T-----TTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred -C-----CCCCCCCHHHHHHHHHHHhCccc-cCccCCEEEECcc
Confidence 0 0123 578999999999886432 2234788888776
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=2.9e-15 Score=150.78 Aligned_cols=226 Identities=15% Similarity=0.172 Sum_probs=145.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||+|+||++++++|+++|. +|+++.|+.. ++. ++ .++. ..++.+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~------~~~-~~---------~~~~--------~~~~~~ 55 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA---RVAVLDKSAE------RLR-EL---------EVAH--------GGNAVG 55 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HHHT--------BTTEEE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEeCCHH------HHH-HH---------HHHc--------CCcEEE
Confidence 4789999999999999999999999995 4577777532 111 11 1111 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc------------cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD------------ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
+.+|+++ .+..+.++ ..+|++||+||..... +.++..+++|+.|+..+++++..
T Consensus 56 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 128 (281)
T 3zv4_A 56 VVGDVRS-------LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLP 128 (281)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999995 33233433 3689999999975321 12667789999999999998865
Q ss_pred c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 151 C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 151 ~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
. ++-.++|++||...+... ...
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~ 152 (281)
T 3zv4_A 129 ALVSSRGSVVFTISNAGFYPN--------------------------------------------------------GGG 152 (281)
T ss_dssp HHHHHTCEEEEECCGGGTSSS--------------------------------------------------------SSC
T ss_pred HHHhcCCeEEEEecchhccCC--------------------------------------------------------CCC
Confidence 3 122589999997654321 123
Q ss_pred chHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCcccccc-chHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK-TINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~-~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. .+++.+..+.|+.|..+...+......... ........+... .....+.
T Consensus 153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~ 223 (281)
T 3zv4_A 153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV---------LPIGRMP 223 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT---------CTTSSCC
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc---------CCCCCCC
Confidence 57999999999988764 445999999999998764322110000000 000001111111 1112356
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++......--.|+++++.+|
T Consensus 224 ~pedvA~~v~fL~s~~~~~~itG~~i~vdGG 254 (281)
T 3zv4_A 224 ALEEYTGAYVFFATRGDSLPATGALLNYDGG 254 (281)
T ss_dssp CGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred CHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence 7789999999888522222235889999887
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=6.1e-15 Score=145.05 Aligned_cols=213 Identities=14% Similarity=0.132 Sum_probs=140.4
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-.+.++||+|+||||+|+||++++++|++.|+ +|+++.|+... .+.+.++ +++.. ..
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~ 64 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAHGA---SVVLLGRTEAS---LAEVSDQ---------IKSAG--------QP 64 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHTT--------SC
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEEecCHHH---HHHHHHH---------HHhcC--------CC
Confidence 34557999999999999999999999999996 45788886422 1222211 11111 24
Q ss_pred ceEEEEccC--CCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHH
Q 008315 86 KITFVAGDI--SSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 86 kv~~v~gDl--~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a 148 (570)
++.++.+|+ ++ .+..+.++ ..+|++||+||.... . +.++..+++|+.|+..+++.+
T Consensus 65 ~~~~~~~d~d~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 137 (247)
T 3i1j_A 65 QPLIIALNLENAT-------AQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRAL 137 (247)
T ss_dssp CCEEEECCTTTCC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEEeccccCC-------HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 567777777 53 33233333 379999999997532 1 346778999999999999988
Q ss_pred HHc---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 149 KKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 149 ~~~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
... .+..++|++||.......
T Consensus 138 ~~~~~~~~~~~iv~isS~~~~~~~-------------------------------------------------------- 161 (247)
T 3i1j_A 138 LPLLKRSEDASIAFTSSSVGRKGR-------------------------------------------------------- 161 (247)
T ss_dssp HHHHTTSSSEEEEEECCGGGTSCC--------------------------------------------------------
T ss_pred HHHHHhCCCCeEEEEcchhhcCCC--------------------------------------------------------
Confidence 532 245789999997654321
Q ss_pred CCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCce
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----K-ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI 299 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~-~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~ 299 (570)
.....|+.||+..|.+++.. . .++.+..+.|+.|..+.. ...... ...
T Consensus 162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~-----------------~~~~~~---------~~~ 215 (247)
T 3i1j_A 162 ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR-----------------AQAYPD---------ENP 215 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH-----------------HHHSTT---------SCG
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc-----------------hhcccc---------cCc
Confidence 12457999999999988754 2 578999999988755311 111000 111
Q ss_pred eecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 300 ~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
..+...+|+|++++.++..... .-.|+++++
T Consensus 216 ~~~~~p~dva~~~~~l~s~~~~-~itG~~i~~ 246 (247)
T 3i1j_A 216 LNNPAPEDIMPVYLYLMGPDST-GINGQALNA 246 (247)
T ss_dssp GGSCCGGGGTHHHHHHHSGGGT-TCCSCEEEC
T ss_pred cCCCCHHHHHHHHHHHhCchhc-cccCeeecC
Confidence 2345678999999888764322 223566654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-14 Score=144.45 Aligned_cols=203 Identities=13% Similarity=0.185 Sum_probs=132.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.+|+|+||||+|+||++++++|++.|. +|+++.|+... .+.+.+++ +.. ..++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~l---------~~~---------~~~~~~ 57 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA---KILLGARRQAR---IEAIATEI---------RDA---------GGTALA 57 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHHH---------HHT---------TCEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 4689999999999999999999999995 45777776422 12222111 111 256888
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++.+... .
T Consensus 58 ~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 130 (264)
T 3tfo_A 58 QVLDVTD-------RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ 130 (264)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 9999995 333334433 799999999986432 346778999999999998887542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 131 ~~g~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 154 (264)
T 3tfo_A 131 RSGQIINIGSIGALSVV--------------------------------------------------------PTAAVYC 154 (264)
T ss_dssp TCEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEEcCHHHcccC--------------------------------------------------------CCChhHH
Confidence 45789999998765321 1235799
Q ss_pred HHHHHHHHHHHHh---cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 233 FTKTMGEMIMQQS---KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 233 ~sK~~aE~~v~~~---~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
.||+..+.+.+.. .+++.+..|+|+.|..+...... .. . . . ..... ........+|+|
T Consensus 155 asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~---~~-~---~-~-----~~~~~------~~~~~~~pedvA 215 (264)
T 3tfo_A 155 ATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTIT---HE-E---T-M-----AAMDT------YRAIALQPADIA 215 (264)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------------------------CCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccccc---ch-h---H-H-----HHHHh------hhccCCCHHHHH
Confidence 9999999887654 24899999999998765432110 00 0 0 0 00000 001136789999
Q ss_pred HHHHHHHHH
Q 008315 310 NAMIVAMVA 318 (570)
Q Consensus 310 ~aii~a~~~ 318 (570)
++++.++..
T Consensus 216 ~~v~~l~s~ 224 (264)
T 3tfo_A 216 RAVRQVIEA 224 (264)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcC
Confidence 999998874
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.9e-15 Score=145.99 Aligned_cols=189 Identities=15% Similarity=0.164 Sum_probs=129.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+||||||+|+||++++++|+++|.. |+++.|+... .+.+. ++. ..++.++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~---V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~~ 54 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA---TYLTGRSESK---LSTVT-------------NCL--------SNNVGYRAR 54 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC---EEEEESCHHH---HHHHH-------------HTC--------SSCCCEEEC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE---EEEEeCCHHH---HHHHH-------------HHH--------hhccCeEee
Confidence 68999999999999999999999965 5788886321 11111 111 256889999
Q ss_pred cCCCCCCCCChhhhHHHHhCCc----cEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c-CceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNEL----DVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V-KLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~v----diVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~-~lk~fV~ 159 (570)
|+++ .+..+.+++++ |+|||+||..... +.++..+++|+.|+.++++.+... . +-.++|+
T Consensus 55 D~~~-------~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~ 127 (230)
T 3guy_A 55 DLAS-------HQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVM 127 (230)
T ss_dssp CTTC-------HHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred cCCC-------HHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 9995 44445666554 8999999975321 346778999999999999988653 1 1238999
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||...+... .....|+.||+..+
T Consensus 128 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa~~ 151 (230)
T 3guy_A 128 IMSTAAQQPK--------------------------------------------------------AQESTYCAVKWAVK 151 (230)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred EeecccCCCC--------------------------------------------------------CCCchhHHHHHHHH
Confidence 9998765321 12467999999999
Q ss_pred HHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 240 MIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.. ..++.+..++|+.|..+..... . .......+..++|+|++++.
T Consensus 152 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------------~---------~~~~~~~~~~~~dvA~~i~~ 205 (230)
T 3guy_A 152 GLIESVRLELKGKPMKIIAVYPGGMATEFWETS-----------------G---------KSLDTSSFMSAEDAALMIHG 205 (230)
T ss_dssp HHHHHHHHHTTTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCeEEEEEECCcccChHHHhc-----------------C---------CCCCcccCCCHHHHHHHHHH
Confidence 988764 3479999999999876432110 0 00113356889999999988
Q ss_pred HHH
Q 008315 315 AMV 317 (570)
Q Consensus 315 a~~ 317 (570)
++.
T Consensus 206 l~~ 208 (230)
T 3guy_A 206 ALA 208 (230)
T ss_dssp HCC
T ss_pred HHh
Confidence 774
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-14 Score=141.51 Aligned_cols=200 Identities=11% Similarity=0.062 Sum_probs=138.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|. +|+++.|+. +
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~---~V~~~~r~~-----------------------------------~---- 41 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHT---IVHVASRQT-----------------------------------G---- 41 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTE---EEEEESGGG-----------------------------------T----
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEecCCc-----------------------------------c----
Confidence 4789999999999999999999999985 456666532 1
Q ss_pred EEccCCCCCCCCChhhhHHHHh---CCccEEEEcCccCC-c-------ccCHHHHHHHHHHHHHHHHHHHHHc-cCceEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW---NELDVMVNSAAITK-F-------DERYDVAFGINTLGAIHLVNFAKKC-VKLKVF 157 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~---~~vdiVih~Aa~v~-f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~f 157 (570)
+|+++ ++..+.++ ..+|++||+||... . .+.++..+++|+.|+..+++++... .+-.++
T Consensus 42 --~D~~~-------~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~i 112 (223)
T 3uce_A 42 --LDISD-------EKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSI 112 (223)
T ss_dssp --CCTTC-------HHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred --cCCCC-------HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEE
Confidence 67774 33334544 47999999999752 1 1346778999999999999998764 223489
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||...+... .....|+.||+.
T Consensus 113 v~~sS~~~~~~~--------------------------------------------------------~~~~~Y~asK~a 136 (223)
T 3uce_A 113 TLTSGMLSRKVV--------------------------------------------------------ANTYVKAAINAA 136 (223)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EEecchhhccCC--------------------------------------------------------CCchHHHHHHHH
Confidence 999998765421 124679999999
Q ss_pred HHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 238 GEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 238 aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
.|.+.+.. .. +.+..++|+.|.++...... . .....+......+. ....+..++|+|++++
T Consensus 137 ~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~---~--~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~~~ 201 (223)
T 3uce_A 137 IEATTKVLAKELAP-IRVNAISPGLTKTEAYKGMN---A--DDRDAMYQRTQSHL---------PVGKVGEASDIAMAYL 201 (223)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSC---H--HHHHHHHHHHHHHS---------TTCSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcc---h--hhHHHHHHHHhhcC---------CCCCccCHHHHHHHHH
Confidence 99988765 33 99999999999876442211 1 01111111121111 1234678999999999
Q ss_pred HHHHHhcCCCCCCceEEeccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++.. ..-.++++++.+|
T Consensus 202 ~l~~~---~~~tG~~i~vdgG 219 (223)
T 3uce_A 202 FAIQN---SYMTGTVIDVDGG 219 (223)
T ss_dssp HHHHC---TTCCSCEEEESTT
T ss_pred HHccC---CCCCCcEEEecCC
Confidence 88862 2334889999887
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.4e-15 Score=146.17 Aligned_cols=198 Identities=12% Similarity=0.117 Sum_probs=134.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|++|||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +.+..+ ...++.+
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~~------~~~~~~~ 63 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY---RVVLIARSKQN---LEKVHDE---------IMRSNK------HVQEPIV 63 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC---EEEEEESCHHH---HHHHHHH---------HHHHCT------TSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHHhcc------ccCcceE
Confidence 5789999999999999999999999996 46788886422 1222211 122111 0156889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc---c---cCHHHHHHHHHHHHHHHHHHHHHc---cC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF---D---ERYDVAFGINTLGAIHLVNFAKKC---VK 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f---~---~~~~~~~~~Nv~gt~~ll~~a~~~---~~ 153 (570)
+.+|+++ .+..+.+++ .+|++||+||.... + +.++..+++|+.|+..+++++... .+
T Consensus 64 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~ 136 (250)
T 3nyw_A 64 LPLDITD-------CTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK 136 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EeccCCC-------HHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999995 333334433 69999999997532 1 346778999999999999988432 24
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
..++|++||....... .....|+.
T Consensus 137 ~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 160 (250)
T 3nyw_A 137 NGYIFNVASRAAKYGF--------------------------------------------------------ADGGIYGS 160 (250)
T ss_dssp CEEEEEECC---------------------------------------------------------------CCTTHHHH
T ss_pred CeEEEEEccHHhcCCC--------------------------------------------------------CCCcchHH
Confidence 5789999997654211 12467999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++.+..++|+.|..+.. ..... ......++..+|+
T Consensus 161 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~-----------------~~~~~---------~~~~~~~~~p~dv 214 (250)
T 3nyw_A 161 TKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA-----------------KKAGT---------PFKDEEMIQPDDL 214 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH-----------------HHTTC---------CSCGGGSBCHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh-----------------hhcCC---------CcccccCCCHHHH
Confidence 999999887754 4589999999998865321 11100 0112346889999
Q ss_pred HHHHHHHHH
Q 008315 309 VNAMIVAMV 317 (570)
Q Consensus 309 a~aii~a~~ 317 (570)
|++++.++.
T Consensus 215 a~~v~~l~s 223 (250)
T 3nyw_A 215 LNTIRCLLN 223 (250)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 999999886
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=9.2e-15 Score=145.40 Aligned_cols=166 Identities=15% Similarity=0.177 Sum_probs=119.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|+||||||+||++++++|+++|. +|+++.|+... .+.+.++ +++. ..++.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 60 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT---AIALLDMNREA---LEKAEAS---------VREK---------GVEARS 60 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHTT---------TSCEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHhc---------CCcEEE
Confidence 6899999999999999999999999995 45777776421 1222211 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccC-C---c----ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAIT-K---F----DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v-~---f----~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ .+..+.+++ .+|+|||+||.. . + .+.++..+++|+.|+.++++++...
T Consensus 61 ~~~D~~~-------~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~ 133 (262)
T 1zem_A 61 YVCDVTS-------EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT 133 (262)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 9999995 332333333 799999999975 2 1 1346778999999999999988653
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+..++|++||...+... .....|
T Consensus 134 ~~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 157 (262)
T 1zem_A 134 QNYGRIVNTASMAGVKGP--------------------------------------------------------PNMAAY 157 (262)
T ss_dssp HTCEEEEEECCHHHHSCC--------------------------------------------------------TTBHHH
T ss_pred cCCcEEEEEcchhhccCC--------------------------------------------------------CCCchH
Confidence 245799999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.||+..+.+.+.. ..++.+.+++|+.|..+
T Consensus 158 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 158 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 99998888877654 45899999999988654
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.5e-14 Score=143.88 Aligned_cols=205 Identities=15% Similarity=0.103 Sum_probs=133.7
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+||||||+|+||++++++|++.|. +|+++.|+... .+.+.++ +.+.. ...+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~~--------~~~~~ 86 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGY---SVVITGRRPDV---LDAAAGE---------IGGRT--------GNIVR 86 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhcC--------CCeEE
Confidence 35899999999999999999999999996 45788886422 1122111 11111 13468
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC-V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~-~ 152 (570)
++.+|+++ .+..+.+++ .+|++||+||.... .+.++..+++|+.|+..+++++... .
T Consensus 87 ~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 159 (281)
T 4dry_A 87 AVVCDVGD-------PDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMK 159 (281)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999995 333334443 68999999997532 1446778999999999988877543 1
Q ss_pred --C--ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 153 --K--LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 153 --~--lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ -.++|++||....... ...
T Consensus 160 ~~~~~~g~IV~isS~~~~~~~--------------------------------------------------------~~~ 183 (281)
T 4dry_A 160 AQTPRGGRIINNGSISAQTPR--------------------------------------------------------PNS 183 (281)
T ss_dssp HSSSCCEEEEEECCGGGTCCC--------------------------------------------------------TTC
T ss_pred hcCCCCcEEEEECCHHhCCCC--------------------------------------------------------CCC
Confidence 1 3689999997754321 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|+|+.|..+.....+. ... ...... ....++
T Consensus 184 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~---~~~-----------~~~~~~-----~~~~~~ 244 (281)
T 4dry_A 184 APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST---GVL-----------QANGEV-----AAEPTI 244 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C---EEE-----------CTTSCE-----EECCCB
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc---hhh-----------hhhhcc-----cccCCC
Confidence 67999999999988764 458999999999987754321110 000 000011 122367
Q ss_pred hHHHHHHHHHHHHHH
Q 008315 304 PVDMVVNAMIVAMVA 318 (570)
Q Consensus 304 pVDdva~aii~a~~~ 318 (570)
..+|+|++++.++..
T Consensus 245 ~pedvA~~v~fL~s~ 259 (281)
T 4dry_A 245 PIEHIAEAVVYMASL 259 (281)
T ss_dssp CHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHhCC
Confidence 899999999998863
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-15 Score=147.04 Aligned_cols=223 Identities=10% Similarity=0.054 Sum_probs=148.5
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+|+||||+ |+||++++++|++.|. +|+++.|+..... .+.+. + +.+.. ..++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~---~v~~~~~~~~~~~-~~~~~-~---------l~~~~--------~~~~ 75 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGA---AVAITYASRAQGA-EENVK-E---------LEKTY--------GIKA 75 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSC---EEEECBSSSSSHH-HHHHH-H---------HHHHH--------CCCE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCC---eEEEEeCCcchhH-HHHHH-H---------HHHhc--------CCce
Confidence 589999999999 8999999999999995 4567777654321 11111 1 12222 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 76 ~~~~~Dl~~-------~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 148 (267)
T 3gdg_A 76 KAYKCQVDS-------YESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFK 148 (267)
T ss_dssp ECCBCCTTC-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred eEEecCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 899999995 333334443 679999999976432 346778999999999999988432
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+..++|++||........ + .....
T Consensus 149 ~~~~g~iv~isS~~~~~~~~--------~----------------------------------------------~~~~~ 174 (267)
T 3gdg_A 149 ERGTGSLVITASMSGHIANF--------P----------------------------------------------QEQTS 174 (267)
T ss_dssp HHTCCEEEEECCGGGTSCCS--------S----------------------------------------------SCCHH
T ss_pred HcCCceEEEEccccccccCC--------C----------------------------------------------CCCCc
Confidence 1456899999976543210 0 12357
Q ss_pred HHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 231 YVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
|+.||+..+.+++.. ...+.+..+.|+.|..+.....+ ......+... .....+..++
T Consensus 175 Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~---------~~~~r~~~~~ 236 (267)
T 3gdg_A 175 YNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP---------KETQQLWHSM---------IPMGRDGLAK 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC---------HHHHHHHHTT---------STTSSCEETH
T ss_pred chHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC---------HHHHHHHHhc---------CCCCCCcCHH
Confidence 999999999988764 33488999999998765432111 1111112111 1223456789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.... ..-.|+++++.+|
T Consensus 237 dva~~~~~l~s~~~-~~itG~~i~vdgG 263 (267)
T 3gdg_A 237 ELKGAYVYFASDAS-TYTTGADLLIDGG 263 (267)
T ss_dssp HHHHHHHHHHSTTC-TTCCSCEEEESTT
T ss_pred HHHhHhheeecCcc-ccccCCEEEECCc
Confidence 99999998875322 2234789999876
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=5e-15 Score=160.99 Aligned_cols=223 Identities=16% Similarity=0.190 Sum_probs=152.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+-.+++||||||||+||.+++++|++.|. .+|+++.|+.......+.+.+++. . ...++.
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~--~~vvl~~R~~~~~~~~~~l~~~l~---------~---------~g~~v~ 315 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGA--ERLVLTSRRGPEAPGAAELAEELR---------G---------HGCEVV 315 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHHH---------T---------TTCEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC--cEEEEEecCCcccHHHHHHHHHHH---------h---------cCCEEE
Confidence 45689999999999999999999999885 357888887643322222221221 1 024689
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
++.+|+++ .+..+.++++ +|+|||+||..... +.++..+++|+.|+.++.+++..++++.+||+
T Consensus 316 ~~~~Dvtd-------~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~ 388 (511)
T 2z5l_A 316 HAACDVAE-------RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVL 388 (511)
T ss_dssp EEECCSSC-------HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEE
T ss_pred EEEeCCCC-------HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEE
Confidence 99999994 4444566654 99999999986542 34667789999999999999876646789999
Q ss_pred Eecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 160 VSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 160 vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
+||... ++.. ....|+.+|+..
T Consensus 389 ~SS~a~~~g~~---------------------------------------------------------g~~~YaaaKa~l 411 (511)
T 2z5l_A 389 FSSVTGTWGNA---------------------------------------------------------GQGAYAAANAAL 411 (511)
T ss_dssp EEEGGGTTCCT---------------------------------------------------------TBHHHHHHHHHH
T ss_pred EeCHHhcCCCC---------------------------------------------------------CCHHHHHHHHHH
Confidence 999754 3321 235799999999
Q ss_pred HHHHHHh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 239 EMIMQQS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 239 E~~v~~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
|.+..+. ..++++++++|+.+..+ |+..... . ..+. ..| ...++.+++++++..++.
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~~t------gm~~~~~-~-~~~~--~~g------------~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWGGG------GMAAGAG-E-ESLS--RRG------------LRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBCST------TCCCCHH-H-HHHH--HHT------------BCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEECCcccCC------ccccccc-H-HHHH--hcC------------CCCCCHHHHHHHHHHHHh
Confidence 9998876 56899999999987322 2222110 0 0011 111 235889999999999886
Q ss_pred HhcCCCCCCceEEeccCCCCcccHHhHHHHH
Q 008315 318 AHAKQPSDANIYHVGSSLRNPVTLVSILDYG 348 (570)
Q Consensus 318 ~~~~~~~~~~iyn~~s~~~~~it~~el~~~~ 348 (570)
... .. +.+. .+.|..+....
T Consensus 470 ~~~-----~~-v~v~-----~~d~~~~~~~~ 489 (511)
T 2z5l_A 470 RND-----VC-VTVV-----DVDWERFAPAT 489 (511)
T ss_dssp HTC-----SE-EEEC-----CBCHHHHHHHH
T ss_pred CCC-----CE-EEEE-----eCCHHHHHhhh
Confidence 321 12 2232 35677776544
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.3e-14 Score=142.85 Aligned_cols=225 Identities=16% Similarity=0.114 Sum_probs=146.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE-ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI-RAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv-R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++|+++||||+|+||++++++|++.|+ +|+++. |+... .+.+.+ .++... ..++.
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~~r~~~~---~~~~~~---------~l~~~~--------~~~~~ 63 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGY---AVCLHYHRSAAE---ANALSA---------TLNARR--------PNSAI 63 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH---HHHHHH---------HHHHHS--------TTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC---eEEEEcCCCHHH---HHHHHH---------HHhhhc--------CCeeE
Confidence 5899999999999999999999999996 457777 75321 122221 122111 25688
Q ss_pred EEEccCCCCCC-------CCC---hhhhHHHHh-------CCccEEEEcCccCCc---------------------ccCH
Q 008315 89 FVAGDISSEDL-------GLK---DSNLKEELW-------NELDVMVNSAAITKF---------------------DERY 130 (570)
Q Consensus 89 ~v~gDl~~~~l-------gls---~~~~~~~l~-------~~vdiVih~Aa~v~f---------------------~~~~ 130 (570)
++.+|+++++. |.. ..+..+.++ ..+|++||+||.... .+.+
T Consensus 64 ~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (291)
T 1e7w_A 64 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT 143 (291)
T ss_dssp EEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHH
T ss_pred EEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH
Confidence 99999997530 000 000122333 379999999997532 2335
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-c--C------ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhh
Q 008315 131 DVAFGINTLGAIHLVNFAKKC-V--K------LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELK 201 (570)
Q Consensus 131 ~~~~~~Nv~gt~~ll~~a~~~-~--~------lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~ 201 (570)
+..+++|+.|+..+++++... . + ..++|++||...+...
T Consensus 144 ~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------- 191 (291)
T 1e7w_A 144 ADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------- 191 (291)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC--------------------------------
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC--------------------------------
Confidence 677899999999999988642 1 2 4789999998765321
Q ss_pred hcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccc
Q 008315 202 TKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKT 276 (570)
Q Consensus 202 ~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~ 276 (570)
.....|+.||+..+.+.+.. ..++.+..|+|+.|..+. + .+
T Consensus 192 ------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~~-------- 237 (291)
T 1e7w_A 192 ------------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-MP-------- 237 (291)
T ss_dssp ------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-SC--------
T ss_pred ------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-CC--------
Confidence 12457999999999888754 458999999999986643 1 10
Q ss_pred hHHHHHHHhcCCCceeecCCCcee-ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 277 INALFVASAQGNLPCLVGETKTIM-DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 277 ~~~~i~~~~~G~~~~~~~~~~~~~-d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
......+.... + .. -+...+++|++++.++.... ..-.++++++.++
T Consensus 238 -~~~~~~~~~~~----p-----~~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdGG 285 (291)
T 1e7w_A 238 -PAVWEGHRSKV----P-----LYQRDSSAAEVSDVVIFLCSSKA-KYITGTCVKVDGG 285 (291)
T ss_dssp -HHHHHHHHTTC----T-----TTTSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred -HHHHHHHHhhC----C-----CCCCCCCHHHHHHHHHHHhCCcc-cCccCcEEEECCC
Confidence 11111111111 1 01 24678999999998886432 2234788888776
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=143.64 Aligned_cols=159 Identities=16% Similarity=0.224 Sum_probs=117.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+++||||+|+||++++++|++.|. +|+++.|+... .+.+. ++. ..++.++.+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~~~~ 53 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH---KVIATGRRQER---LQELK-------------DEL--------GDNLYIAQL 53 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HHH--------CTTEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHH-------------HHh--------cCceEEEEc
Confidence 6899999999999999999999995 45777775321 11111 111 146889999
Q ss_pred cCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHHc---cCc
Q 008315 93 DISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKKC---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~l 154 (570)
|+++ .+..+.+++ ++|++||+||... +. +.++..+++|+.|+.++++.+... .+.
T Consensus 54 Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~ 126 (248)
T 3asu_A 54 DVRN-------RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNH 126 (248)
T ss_dssp CTTC-------HHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCC-------HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 9995 333445544 6899999999752 21 346778999999999999888631 245
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|++||....... .....|+.|
T Consensus 127 g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 150 (248)
T 3asu_A 127 GHIINIGSTAGSWPY--------------------------------------------------------AGGNVYGAT 150 (248)
T ss_dssp CEEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHH
T ss_pred ceEEEEccchhccCC--------------------------------------------------------CCCchHHHH
Confidence 799999998765321 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEecccccc
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g 261 (570)
|+..|.+.+.. ..++.+.+++|+.|.|
T Consensus 151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 99999988764 3589999999999984
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=4.9e-14 Score=142.98 Aligned_cols=209 Identities=17% Similarity=0.176 Sum_probs=123.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
...++|+||||||+|+||++++++|++.|. +|+++.|+.... +... +.+++.. ..++
T Consensus 8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~---~V~~~~r~~~~~---~~~~---------~~l~~~~--------~~~~ 64 (311)
T 3o26_A 8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGI---MVVLTCRDVTKG---HEAV---------EKLKNSN--------HENV 64 (311)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH---------HHHHTTT--------CCSE
T ss_pred ccCCCcEEEEecCCchHHHHHHHHHHHCCC---EEEEEeCCHHHH---HHHH---------HHHHhcC--------CCce
Confidence 346899999999999999999999999995 568888864321 1111 1122221 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc----------------------------------
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF---------------------------------- 126 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f---------------------------------- 126 (570)
.++.+|++++ .+..+.++ ..+|+|||+||....
T Consensus 65 ~~~~~Dl~~~------~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (311)
T 3o26_A 65 VFHQLDVTDP------IATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELM 138 (311)
T ss_dssp EEEECCTTSC------HHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTE
T ss_pred EEEEccCCCc------HHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhccc
Confidence 9999999953 02222332 379999999998632
Q ss_pred ---ccCHHHHHHHHHHHHHHHHHHHHHc---cCceEEEEEecccccCCCC-CeeccccCCCCCCCChHHHHHHHHHHHHh
Q 008315 127 ---DERYDVAFGINTLGAIHLVNFAKKC---VKLKVFVHVSTAYVAGERT-GLILENPLDGASGLDFDAEMKVIDQKLNE 199 (570)
Q Consensus 127 ---~~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV~vSTa~v~~~~~-g~i~E~~~~e~~~~d~~~~~~~~~~~~~~ 199 (570)
.+.++..+++|+.|+..+++++... .+..++|++||........ ....+..+.....+...............
T Consensus 139 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (311)
T 3o26_A 139 SETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKD 218 (311)
T ss_dssp ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred ccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhh
Confidence 1234567899999999999988642 2456999999976543211 00000001000111111111111110000
Q ss_pred hhhcCCChHHHHHHHhhccccccccCCCC---chHHHHHHHHHHHHHHh---cCCCcEEEEeccccccC
Q 008315 200 LKTKGAPQKEITLFMKNLGTERAKIHGWP---NTYVFTKTMGEMIMQQS---KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---n~Y~~sK~~aE~~v~~~---~~~lp~~IvRPsiV~g~ 262 (570)
.. .......+++ ..|+.||+..+.+++.. ..++.+..+.||.|..+
T Consensus 219 ~~-----------------~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 219 FK-----------------ENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HH-----------------TTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred hh-----------------ccccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 00 0000111232 57999999999998765 34688999999988664
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-14 Score=149.48 Aligned_cols=215 Identities=14% Similarity=0.158 Sum_probs=143.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA----ALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~----~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
-++||+||||||+|+||++++++|++.|. +|+++.|+...... .+...+++ +. ..
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga---~Vvl~~r~~~~~~~l~~~l~~~~~~~---------~~---------~g 100 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA---NIVIAAKTAQPHPKLLGTIYTAAEEI---------EA---------VG 100 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESCCSCCSSSCCCHHHHHHHH---------HH---------TT
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC---EEEEEECChhhhhhhHHHHHHHHHHH---------Hh---------cC
Confidence 46899999999999999999999999995 56788887654211 11111111 11 12
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
.++.++.+|+++ ++..+.+++ .+|+|||+||..... +.++..+++|+.|+..+++++..
T Consensus 101 ~~~~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 173 (346)
T 3kvo_A 101 GKALPCIVDVRD-------EQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIP 173 (346)
T ss_dssp CEEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 578899999995 333344443 799999999975431 34677899999999999999854
Q ss_pred c---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 151 C---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 151 ~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
. .+..++|++||........ + ..
T Consensus 174 ~m~~~~~g~IV~iSS~~~~~~~~-------~-----------------------------------------------~~ 199 (346)
T 3kvo_A 174 YLKKSKVAHILNISPPLNLNPVW-------F-----------------------------------------------KQ 199 (346)
T ss_dssp HHTTCSSCEEEEECCCCCCCGGG-------T-----------------------------------------------SS
T ss_pred HHHHCCCCEEEEECCHHHcCCCC-------C-----------------------------------------------CC
Confidence 3 2456899999976543210 0 12
Q ss_pred CchHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 228 PNTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
...|+.||+..+.+++.. ..++.+..+.|+.+..+. +.... .+. .....+.
T Consensus 200 ~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~----------------~~~~~-~~~--------~~~~r~~ 254 (346)
T 3kvo_A 200 HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA----------------AMDML-GGP--------GIESQCR 254 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH----------------HHHHH-CC----------CGGGCB
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH----------------HHHhh-ccc--------cccccCC
Confidence 467999999999888754 457999999998533321 11111 110 1122356
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEecc
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s 333 (570)
..+|+|++++.++.. . ..-.|+++ +.+
T Consensus 255 ~pedvA~~v~~L~s~-~-~~itG~~i-vdg 281 (346)
T 3kvo_A 255 KVDIIADAAYSIFQK-P-KSFTGNFV-IDE 281 (346)
T ss_dssp CTHHHHHHHHHHHTS-C-TTCCSCEE-EHH
T ss_pred CHHHHHHHHHHHHhc-C-CCCCceEE-ECC
Confidence 789999999998864 2 22236666 544
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.3e-14 Score=142.40 Aligned_cols=211 Identities=12% Similarity=0.123 Sum_probs=139.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH----HHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA----ALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~----~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
++||+++||||+|+||++++++|+++|. +|+++.|+...... .+...++ ++.. ..
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~---------~~ 62 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA---NVAIAAKSAVANPKLPGTIHSAAAA---------VNAA---------GG 62 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCCSCCTTSCCCHHHHHHH---------HHHH---------TS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC---EEEEEeccchhhhhhHHHHHHHHHH---------HHhc---------CC
Confidence 5799999999999999999999999995 56888887653211 1111111 1111 25
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++.++.+|+++ .+..+.+++ .+|++||+||..... +.++..+++|+.|+..+++++...
T Consensus 63 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 135 (274)
T 3e03_A 63 QGLALKCDIRE-------EDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH 135 (274)
T ss_dssp EEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence 78999999995 333334433 799999999975321 346778999999999999988652
Q ss_pred ---cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 ---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 ---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+-.++|++||........ + ...
T Consensus 136 m~~~~~g~iv~isS~~~~~~~~-------~-----------------------------------------------~~~ 161 (274)
T 3e03_A 136 LLQAPNPHILTLAPPPSLNPAW-------W-----------------------------------------------GAH 161 (274)
T ss_dssp HTTSSSCEEEECCCCCCCCHHH-------H-----------------------------------------------HHC
T ss_pred HHhcCCceEEEECChHhcCCCC-------C-----------------------------------------------CCC
Confidence 2446899999976542100 0 113
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..+.|+.+..+.. . .. ... .....+.
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~---~---~~------------------~~~--~~~~~~~ 215 (274)
T 3e03_A 162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA---I---NM------------------LPG--VDAAACR 215 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------------------C--CCGGGSB
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch---h---hh------------------ccc--ccccccC
Confidence 57999999999888754 4579999999984333211 0 00 000 0111256
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
..+++|++++.++.... ..-.|+++
T Consensus 216 ~pedvA~~v~~l~s~~~-~~itG~~i 240 (274)
T 3e03_A 216 RPEIMADAAHAVLTREA-AGFHGQFL 240 (274)
T ss_dssp CTHHHHHHHHHHHTSCC-TTCCSCEE
T ss_pred CHHHHHHHHHHHhCccc-cccCCeEE
Confidence 78999999999885332 22235666
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-14 Score=148.78 Aligned_cols=172 Identities=10% Similarity=0.109 Sum_probs=120.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|+||||||+||++++++|++.|..| +++.|+........+..+++ .. .. ....++.++
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v---~~v~r~~~~~~~~~~~~~~~---------~~-~~-----~~~~~~~~~ 62 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQS---FKVYATLRDLKTQGRLWEAA---------RA-LA-----CPPGSLETL 62 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCC---EEEEEEESCGGGTHHHHHHH---------HH-TT-----CCTTSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCce---EEEEeecCcHHHHHHHHHHh---------hh-cc-----CCCCceEEE
Confidence 47899999999999999999999999765 56666544322111111010 00 00 002468899
Q ss_pred EccCCCCCCCCChhhhHHHHhCC-----ccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cCce
Q 008315 91 AGDISSEDLGLKDSNLKEELWNE-----LDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VKLK 155 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~-----vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk 155 (570)
.+|+++ .+..+.+++. +|++||+||..... +.++..+++|+.|+.++++++.. + .+..
T Consensus 63 ~~Dv~d-------~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g 135 (327)
T 1jtv_A 63 QLDVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG 135 (327)
T ss_dssp ECCTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred EecCCC-------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 999995 4434566554 89999999975321 34677899999999999998743 1 2568
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||...+... .....|+.||
T Consensus 136 ~IV~isS~~~~~~~--------------------------------------------------------~~~~~Y~aSK 159 (327)
T 1jtv_A 136 RVLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASK 159 (327)
T ss_dssp EEEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEECCcccccCC--------------------------------------------------------CCChHHHHHH
Confidence 99999998765321 1235799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
+..|.+.+.. ..++.+++|+|+.|.++.
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 9999988765 358999999999997764
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.3e-14 Score=142.35 Aligned_cols=167 Identities=11% Similarity=0.114 Sum_probs=116.6
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.-++ |+||||||+|+||++++++|++.|. +|+++.|+... .+.+.+++ . . ..++
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~---~V~~~~r~~~~---~~~~~~~~-------------~----~--~~~~ 71 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW---SLVLTGRREER---LQALAGEL-------------S----A--KTRV 71 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH-------------T----T--TSCE
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHh-------------h----c--CCcE
Confidence 3456 8999999999999999999999995 45788886321 11111111 0 0 1368
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCC-------ccEEEEcCccCCc--------ccCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNE-------LDVMVNSAAITKF--------DERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~-------vdiVih~Aa~v~f--------~~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
.++.+|+++ .+..+.++++ +|++||+||.... .+.++..+++|+.|+.++++.+...
T Consensus 72 ~~~~~Dv~d-------~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m 144 (272)
T 2nwq_A 72 LPLTLDVRD-------RAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRL 144 (272)
T ss_dssp EEEECCTTC-------HHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999995 4434455543 6999999997532 1346778999999988888777532
Q ss_pred --cCce-EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 --VKLK-VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 --~~lk-~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.+.. ++|++||...+... ...
T Consensus 145 ~~~~~g~~IV~isS~~~~~~~--------------------------------------------------------~~~ 168 (272)
T 2nwq_A 145 IAHGAGASIVNLGSVAGKWPY--------------------------------------------------------PGS 168 (272)
T ss_dssp HHHCTTCEEEEECCGGGTSCC--------------------------------------------------------TTC
T ss_pred HhcCCCcEEEEeCCchhccCC--------------------------------------------------------CCC
Confidence 1445 99999998765321 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
..|+.||+..|.+.+.. ..++++.+++|+.|.++.
T Consensus 169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 57999999999998765 347999999999997753
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=9.7e-14 Score=137.63 Aligned_cols=167 Identities=14% Similarity=0.180 Sum_probs=117.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHH---hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILR---VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~---~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++|+++||||+|+||++++++|++ .|. +|+++.|+... .+.+.+ .+++..+ ..+
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~---~V~~~~r~~~~---~~~~~~---------~l~~~~~-------~~~ 61 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS---VMLVSARSESM---LRQLKE---------ELGAQQP-------DLK 61 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC---EEEEEESCHHH---HHHHHH---------HHHHHCT-------TSE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC---eEEEEeCCHHH---HHHHHH---------HHHhhCC-------CCe
Confidence 5789999999999999999999998 785 56788885421 122211 1222111 246
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh----C-----Ccc--EEEEcCccCC-----c-----ccCHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW----N-----ELD--VMVNSAAITK-----F-----DERYDVAFGINTLGAIHLV 145 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~----~-----~vd--iVih~Aa~v~-----f-----~~~~~~~~~~Nv~gt~~ll 145 (570)
+.++.+|+++ .+..+.++ + .+| ++||+||... + .+.++..+++|+.|+.+++
T Consensus 62 ~~~~~~Dv~~-------~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 134 (259)
T 1oaa_A 62 VVLAAADLGT-------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLT 134 (259)
T ss_dssp EEEEECCTTS-------HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHH
T ss_pred EEEEecCCCC-------HHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999995 33223332 2 467 9999999742 1 1346778999999999999
Q ss_pred HHHHHc-c----CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccc
Q 008315 146 NFAKKC-V----KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 146 ~~a~~~-~----~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
+++... . +..++|++||...+...
T Consensus 135 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------------------------------------------- 163 (259)
T 1oaa_A 135 SGTLNAFQDSPGLSKTVVNISSLCALQPY--------------------------------------------------- 163 (259)
T ss_dssp HHHHHTSCCCTTCEEEEEEECCGGGTSCC---------------------------------------------------
T ss_pred HHHHHHHhhccCCCceEEEEcCchhcCCC---------------------------------------------------
Confidence 998753 1 23579999998765321
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh---cCCCcEEEEecccccc
Q 008315 221 RAKIHGWPNTYVFTKTMGEMIMQQS---KENLSLVIIRPTIVSG 261 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~~v~~~---~~~lp~~IvRPsiV~g 261 (570)
.....|+.||+..|.+.+.. ..++.+..+.|+.|-.
T Consensus 164 -----~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T 202 (259)
T 1oaa_A 164 -----KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred -----CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCc
Confidence 12457999999999988765 2348888899988754
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.56 E-value=5.2e-14 Score=150.95 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=141.5
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
..++||+++||||+|.||.++++.|.+.|. +|+++.|+... +.+. ++. ++ .++
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga---~Vvl~~r~~~~----~~l~-~~~---------~~----------~~~ 261 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGA---TVVAIDVDGAA----EDLK-RVA---------DK----------VGG 261 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEECGGGH----HHHH-HHH---------HH----------HTC
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCC---EEEEEeCCccH----HHHH-HHH---------HH----------cCC
Confidence 345899999999999999999999999985 46777775432 1221 110 01 235
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC--------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN--------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~--------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
.++.+|++++ +..+.+++ .+|+|||+||..... +.++..+++|+.|+.++.+++...
T Consensus 262 ~~~~~Dvtd~-------~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~ 334 (454)
T 3u0b_A 262 TALTLDVTAD-------DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNG 334 (454)
T ss_dssp EEEECCTTST-------THHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred eEEEEecCCH-------HHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6899999964 22233332 399999999986432 346778999999999999998764
Q ss_pred --cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 --VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 --~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..+||++||....... ....
T Consensus 335 ~~~~~g~iV~iSS~a~~~g~--------------------------------------------------------~g~~ 358 (454)
T 3u0b_A 335 TIGEGGRVIGLSSMAGIAGN--------------------------------------------------------RGQT 358 (454)
T ss_dssp SSCTTCEEEEECCHHHHHCC--------------------------------------------------------TTCH
T ss_pred hhcCCCEEEEEeChHhCCCC--------------------------------------------------------CCCH
Confidence 145789999997654321 1235
Q ss_pred hHHHHHHHHHHHHHH----h-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQ----S-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~----~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+. + ..++++..|.|+.|.++.....+.... .... . .. ....+..
T Consensus 359 ~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~------~~~~-~---~~--------~l~r~g~ 420 (454)
T 3u0b_A 359 NYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATR------EVGR-R---LN--------SLFQGGQ 420 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------C------HHHH-H---SB--------TTSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhH------HHHH-h---hc--------cccCCCC
Confidence 799999966555543 3 468999999999997754322211100 0000 0 00 0112346
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|+++..++.... ..-.++++++.++
T Consensus 421 pedvA~~v~fL~s~~a-~~itG~~i~vdGG 449 (454)
T 3u0b_A 421 PVDVAELIAYFASPAS-NAVTGNTIRVCGQ 449 (454)
T ss_dssp HHHHHHHHHHHHCGGG-TTCCSCEEEESSS
T ss_pred HHHHHHHHHHHhCCcc-CCCCCcEEEECCc
Confidence 7899999998876433 2334789998776
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.5e-13 Score=136.01 Aligned_cols=222 Identities=13% Similarity=0.119 Sum_probs=137.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+||||||+||++++++|+++|. +|+++.|+..... .+. + ++.. + .++..+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~---~~~-~---------l~~~-~--------~~~~~~-- 54 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH---TVACHDESFKQKD---ELE-A---------FAET-Y--------PQLKPM-- 54 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC---EEEECCGGGGSHH---HHH-H---------HHHH-C--------TTSEEC--
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHHHH---HHH-H---------HHhc-C--------CcEEEE--
Confidence 6899999999999999999999996 4577788654321 111 1 1111 1 233333
Q ss_pred cCCCCCCCCChhhhHHHH---hCCccEEEEcCccC-Cc---c----cCHHHHHHHHHHHHHHHHHHHHHc---cCceEEE
Q 008315 93 DISSEDLGLKDSNLKEEL---WNELDVMVNSAAIT-KF---D----ERYDVAFGINTLGAIHLVNFAKKC---VKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v-~f---~----~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV 158 (570)
|..+ -....+.+ ...+|++||+||.. .. . +.++..+++|+.|+.++++++... .+..++|
T Consensus 55 d~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv 128 (254)
T 1zmt_A 55 SEQE------PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHII 128 (254)
T ss_dssp CCCS------HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 3331 12222222 24799999999976 32 1 346778999999999999987532 1457999
Q ss_pred EEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 159 HVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 159 ~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
++||...+... .....|+.||+..
T Consensus 129 ~isS~~~~~~~--------------------------------------------------------~~~~~Y~~sK~a~ 152 (254)
T 1zmt_A 129 FITSATPFGPW--------------------------------------------------------KELSTYTSARAGA 152 (254)
T ss_dssp EECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHH
T ss_pred EECCcccccCC--------------------------------------------------------CCchHHHHHHHHH
Confidence 99998765321 1235799999999
Q ss_pred HHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 239 EMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 239 E~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+.+.+.. ..++.+++++|+.|+|+...... ..+............... .+ ...+...+|+|++++
T Consensus 153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~-~T~~~~~~~~~~~~~~~~----~p-----~~~~~~p~dvA~~v~ 222 (254)
T 1zmt_A 153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY-PTEPWKTNPEHVAHVKKV----TA-----LQRLGTQKELGELVA 222 (254)
T ss_dssp HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC-BHHHHTTCHHHHHHHHHH----SS-----SSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCccccccccccC-CCcccccChHHHHHHhcc----CC-----CCCCcCHHHHHHHHH
Confidence 9988764 34899999999999776431110 000000001111111110 00 113567899999999
Q ss_pred HHHHHhcCCCCCCceEEeccC
Q 008315 314 VAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.++.... ....++++++.++
T Consensus 223 ~l~s~~~-~~~tG~~~~vdgG 242 (254)
T 1zmt_A 223 FLASGSC-DYLTGQVFWLAGG 242 (254)
T ss_dssp HHHTTSC-GGGTTCEEEESTT
T ss_pred HHhCccc-CCccCCEEEECCC
Confidence 8875322 1124788998876
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.8e-13 Score=132.43 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=148.2
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+.|+||+++||||++.||+++++.|.+.|. +|++..|+...... ....+
T Consensus 6 ~dlf~GK~alVTGas~GIG~aia~~la~~Ga---~Vv~~~~~~~~~~~---------------------------~~~~~ 55 (242)
T 4b79_A 6 HDIYAGQQVLVTGGSSGIGAAIAMQFAELGA---EVVALGLDADGVHA---------------------------PRHPR 55 (242)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTSTTS---------------------------CCCTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCCHHHHhh---------------------------hhcCC
Confidence 4668999999999999999999999999995 45778887543211 11357
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh---CCccEEEEcCccCCcc-----cCHHHHHHHHHHHHHHHHHHHHHcc--CceE
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW---NELDVMVNSAAITKFD-----ERYDVAFGINTLGAIHLVNFAKKCV--KLKV 156 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~---~~vdiVih~Aa~v~f~-----~~~~~~~~~Nv~gt~~ll~~a~~~~--~lk~ 156 (570)
+..+.+|+++ ++..++++ ..+|++||+||..... +.|+..+++|+.|+..+.+++..+- +-.+
T Consensus 56 ~~~~~~Dv~~-------~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~ 128 (242)
T 4b79_A 56 IRREELDITD-------SQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGS 128 (242)
T ss_dssp EEEEECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEE
T ss_pred eEEEEecCCC-------HHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe
Confidence 8899999995 33344554 4699999999975432 4578889999999999998876541 2268
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... .....|..||+
T Consensus 129 IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asKa 152 (242)
T 4b79_A 129 ILNIASMYSTFGS--------------------------------------------------------ADRPAYSASKG 152 (242)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEeeccccCCC--------------------------------------------------------CCCHHHHHHHH
Confidence 9999998754321 12357999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+.+.+.. ..++.+..|-|+.|-.+..+... .+ ......+.... | ..-+.-.+|+|++
T Consensus 153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~---~~----~~~~~~~~~~~----P-----lgR~g~peeiA~~ 216 (242)
T 4b79_A 153 AIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK---AD----VEATRRIMQRT----P-----LARWGEAPEVASA 216 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C---CC----HHHHHHHHHTC----T-----TCSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc---CC----HHHHHHHHhcC----C-----CCCCcCHHHHHHH
Confidence 988887654 56899999999999765432211 11 11111121111 1 1123456899999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++.+... --.|+++.+.+|
T Consensus 217 v~fLaSd~a~-~iTG~~l~VDGG 238 (242)
T 4b79_A 217 AAFLCGPGAS-FVTGAVLAVDGG 238 (242)
T ss_dssp HHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHhCchhc-CccCceEEECcc
Confidence 9988764332 234788888765
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-13 Score=137.16 Aligned_cols=166 Identities=17% Similarity=0.210 Sum_probs=117.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+++||||+|+||++++++|++.|. +|+++.|+... .+.+.++ ++.. ..++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~~~---------~~~~---------~~~~~~ 58 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA---TVYITGRHLDT---LRVVAQE---------AQSL---------GGQCVP 58 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHH---------SSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC---EEEEEeCCHHH---HHHHHHH---------HHHc---------CCceEE
Confidence 5789999999999999999999999995 45777775321 1111111 1111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHH--------hCCccEEEEcCc--cC--------Cc----ccCHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEEL--------WNELDVMVNSAA--IT--------KF----DERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l--------~~~vdiVih~Aa--~v--------~f----~~~~~~~~~~Nv~gt~~ll~~ 147 (570)
+.+|+++ .+..+.+ ...+|++||+|| .. .+ .+.++..+++|+.|+..+.++
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 131 (260)
T 2qq5_A 59 VVCDSSQ-------ESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVY 131 (260)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHH
Confidence 9999995 3222232 346899999994 21 11 134677889999999888877
Q ss_pred HHH-c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccccc
Q 008315 148 AKK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKI 224 (570)
Q Consensus 148 a~~-~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
+.. + .+..++|++||...+..
T Consensus 132 ~~~~~~~~~~g~iv~isS~~~~~~-------------------------------------------------------- 155 (260)
T 2qq5_A 132 GARLMVPAGQGLIVVISSPGSLQY-------------------------------------------------------- 155 (260)
T ss_dssp HHHHHGGGTCCEEEEECCGGGTSC--------------------------------------------------------
T ss_pred HHHHHhhcCCcEEEEEcChhhcCC--------------------------------------------------------
Confidence 653 2 24578999999876421
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 225 HGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.+...|+.||+..|.+.+.. ..++++.+++|+.|..+.
T Consensus 156 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 -MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 11357999999999998764 358999999999997754
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=6.5e-13 Score=131.60 Aligned_cols=225 Identities=12% Similarity=0.190 Sum_probs=147.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|.++|. +|++..|+.......+.+. +. ..++.+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga---~Vv~~~r~~~~~~~~~~~~-------------~~---------~~~~~~ 59 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA---IPVVFARHAPDGAFLDALA-------------QR---------QPRATY 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSCCCHHHHHHHH-------------HH---------CTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCcccHHHHHHHH-------------hc---------CCCEEE
Confidence 6899999999999999999999999995 5578888766533222221 11 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc------ccCHHHHHHHHHHHHHHHHHHHHHc-c-Cc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF------DERYDVAFGINTLGAIHLVNFAKKC-V-KL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-~l 154 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+++... + +-
T Consensus 60 ~~~Dv~~-------~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~ 132 (258)
T 4gkb_A 60 LPVELQD-------DAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR 132 (258)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 9999995 33223333 369999999997432 2457788999999999998887542 1 22
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... .....|+.|
T Consensus 133 G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~as 156 (258)
T 4gkb_A 133 GAIVNISSKTAVTGQ--------------------------------------------------------GNTSGYCAS 156 (258)
T ss_dssp CEEEEECCTHHHHCC--------------------------------------------------------SSCHHHHHH
T ss_pred CeEEEEeehhhccCC--------------------------------------------------------CCchHHHHH
Confidence 589999998764321 123579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++.+..|-|+.|-.+..+ .|................... . + .-+...+|+|
T Consensus 157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~---~~~~~~~~~~~~~~~~~~~~p-l--g-----~R~g~peeiA 225 (258)
T 4gkb_A 157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYR---NWIATFEDPEAKLAEIAAKVP-L--G-----RRFTTPDEIA 225 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHTTCT-T--T-----TSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHh---hhhhcccChHHHHHHHHhcCC-C--C-----CCCcCHHHHH
Confidence 99888887654 56899999999999765432 111111111111111211110 0 0 1234568999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++.+... --.|+++.+.+|
T Consensus 226 ~~v~fLaS~~a~-~iTG~~i~VDGG 249 (258)
T 4gkb_A 226 DTAVFLLSPRAS-HTTGEWLFVDGG 249 (258)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCchhc-CccCCeEEECCC
Confidence 999988864332 234788988876
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.52 E-value=6.3e-14 Score=139.92 Aligned_cols=226 Identities=14% Similarity=0.049 Sum_probs=143.1
Q ss_pred cCCCEEEEECC--ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGV--TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
+++|+|+|||| +|+||++++++|++.|. +|+++.|+... ..+.+ .++. ..++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~---~V~~~~r~~~~--~~~~~-------------~~~~--------~~~~ 58 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRLR--LIQRI-------------TDRL--------PAKA 58 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTC---EEEEEECSCHH--HHHHH-------------HTTS--------SSCC
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCC---EEEEEecChHH--HHHHH-------------HHhc--------CCCc
Confidence 68999999999 99999999999999995 45777886421 11111 1111 2467
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC----------CccEEEEcCccCC--------c----ccCHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN----------ELDVMVNSAAITK--------F----DERYDVAFGINTLGAIHLV 145 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~----------~vdiVih~Aa~v~--------f----~~~~~~~~~~Nv~gt~~ll 145 (570)
.++.+|+++ .+..+.+++ .+|++||+||... + .+.++..+++|+.|+..++
T Consensus 59 ~~~~~Dv~~-------~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 131 (269)
T 2h7i_A 59 PLLELDVQN-------EEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMA 131 (269)
T ss_dssp CEEECCTTC-------HHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred eEEEccCCC-------HHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHH
Confidence 889999995 333334443 7999999999754 1 1346677999999999999
Q ss_pred HHHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccccc
Q 008315 146 NFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKI 224 (570)
Q Consensus 146 ~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
+++... ..-.++|++||....+.
T Consensus 132 ~~~~~~~~~~g~iv~iss~~~~~~-------------------------------------------------------- 155 (269)
T 2h7i_A 132 KALLPIMNPGGSIVGMDFDPSRAM-------------------------------------------------------- 155 (269)
T ss_dssp HHHGGGEEEEEEEEEEECCCSSCC--------------------------------------------------------
T ss_pred HHHHHhhccCCeEEEEcCcccccc--------------------------------------------------------
Confidence 998753 22258999998654211
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCcc-cccc-chHHHHHHHhcCCCceeecCC
Q 008315 225 HGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGWV-EDLK-TINALFVASAQGNLPCLVGET 296 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw~-~~~~-~~~~~i~~~~~G~~~~~~~~~ 296 (570)
.....|+.||+..+.+.+.. ..++.+..++|+.|..+..... .+.. +... ....+...+... .+.
T Consensus 156 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~-- 228 (269)
T 2h7i_A 156 -PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR----API-- 228 (269)
T ss_dssp -TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH----CTT--
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc----CCc--
Confidence 12357999999999888764 4589999999998865421000 0000 0000 000001111110 000
Q ss_pred CceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 297 KTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 297 ~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+.+...+|+|++++.++.... .--.|+++++.++
T Consensus 229 --~rr~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG 263 (269)
T 2h7i_A 229 --GWNMKDATPVAKTVCALLSDWL-PATTGDIIYADGG 263 (269)
T ss_dssp --CCCTTCCHHHHHHHHHHHSSSC-TTCCSEEEEESTT
T ss_pred --ccCCCCHHHHHHHHHHHhCchh-ccCcceEEEecCC
Confidence 0024567899999998885322 2234788888776
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-13 Score=148.25 Aligned_cols=167 Identities=16% Similarity=0.153 Sum_probs=125.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++||||||+|+||.++++.|++.|. .+|+++.|+.......+.+.+++.. . ..++.++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga--~~vvl~~R~~~~~~~~~~l~~~l~~----------~--------g~~v~~~~ 298 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGA--AHLVLTSRRGADAPGAAELRAELEQ----------L--------GVRVTIAA 298 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTC--SEEEEEESSGGGSTTHHHHHHHHHH----------T--------TCEEEEEE
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCC--cEEEEEeCCCCChHHHHHHHHHHHh----------c--------CCeEEEEE
Confidence 38999999999999999999999885 4677888875443333333322211 1 25789999
Q ss_pred ccCCCCCCCCChhhhHHHHhC------CccEEEEcCccC-Cc-------ccCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 92 GDISSEDLGLKDSNLKEELWN------ELDVMVNSAAIT-KF-------DERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v-~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
+|+++ .+..+.+++ .+|+|||+||.. .. .+.++..+++|+.|+.++.+++... .+.+|
T Consensus 299 ~Dvtd-------~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~i 370 (496)
T 3mje_A 299 CDAAD-------REALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAF 370 (496)
T ss_dssp CCTTC-------HHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEE
T ss_pred ccCCC-------HHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEE
Confidence 99995 443445554 489999999986 22 1346778999999999999999876 67899
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|++||....-... ....|+.+|+.
T Consensus 371 V~~SS~a~~~g~~--------------------------------------------------------g~~~YaAaKa~ 394 (496)
T 3mje_A 371 VLFSSGAAVWGSG--------------------------------------------------------GQPGYAAANAY 394 (496)
T ss_dssp EEEEEHHHHTTCT--------------------------------------------------------TCHHHHHHHHH
T ss_pred EEEeChHhcCCCC--------------------------------------------------------CcHHHHHHHHH
Confidence 9999976542211 23579999999
Q ss_pred HHHHHHHh-cCCCcEEEEeccccccC
Q 008315 238 GEMIMQQS-KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 238 aE~~v~~~-~~~lp~~IvRPsiV~g~ 262 (570)
.+.+..+. ..+++++.|.|+.+.++
T Consensus 395 ldala~~~~~~Gi~v~sV~pG~w~~~ 420 (496)
T 3mje_A 395 LDALAEHRRSLGLTASSVAWGTWGEV 420 (496)
T ss_dssp HHHHHHHHHHTTCCCEEEEECEESSS
T ss_pred HHHHHHHHHhcCCeEEEEECCcccCC
Confidence 99998876 67999999999988654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.1e-13 Score=138.45 Aligned_cols=211 Identities=16% Similarity=0.210 Sum_probs=133.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC------CcccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA------DTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~------~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+|+||||+|+||++++++|++.|.. |++..|.. +.....+.+.+++ +...
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~---Vv~~~~~~~~~~~~R~~~~~~~~~~~l---------~~~~-------- 66 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKGSSAADKVVEEI---------RRRG-------- 66 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCCSHHHHHHHHHH---------HHTT--------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEcCCcccccccCCHHHHHHHHHHH---------HhhC--------
Confidence 58999999999999999999999999964 45654421 1112222222111 1110
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
.. +.+|++++.- -....+.+ ...+|++||+||..... +.++..+++|+.|+.++++++...
T Consensus 67 -~~---~~~D~~~~~~---~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 139 (319)
T 1gz6_A 67 -GK---AVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 139 (319)
T ss_dssp -CE---EEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -Ce---EEEeCCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 11 2478885310 00111112 34799999999975431 346778999999999999887431
Q ss_pred -cCceEEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 -VKLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 -~~lk~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
.+..++|++||... ++.. ...
T Consensus 140 ~~~~grIV~vsS~~~~~~~~---------------------------------------------------------~~~ 162 (319)
T 1gz6_A 140 KQNYGRIIMTASASGIYGNF---------------------------------------------------------GQA 162 (319)
T ss_dssp HHTCEEEEEECCHHHHHCCT---------------------------------------------------------TCH
T ss_pred HcCCCEEEEECChhhccCCC---------------------------------------------------------CCH
Confidence 24579999999644 3321 135
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++.+.+++|+.+ .... .... ... ....+.
T Consensus 163 ~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~-------~~~~-~~~-------------------~~~~~~ 214 (319)
T 1gz6_A 163 NYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT-------ETVM-PED-------------------LVEALK 214 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT-------GGGS-CHH-------------------HHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc-------cccC-Chh-------------------hhccCC
Confidence 7999999999888764 35899999999987 2211 1000 000 112356
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+++|.+++.++... ....+++|++.++
T Consensus 215 p~dvA~~~~~l~s~~--~~~tG~~~~v~GG 242 (319)
T 1gz6_A 215 PEYVAPLVLWLCHES--CEENGGLFEVGAG 242 (319)
T ss_dssp GGGTHHHHHHHTSTT--CCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCch--hhcCCCEEEECCC
Confidence 789999988877532 1234788888776
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.49 E-value=9.7e-12 Score=122.68 Aligned_cols=223 Identities=15% Similarity=0.115 Sum_probs=145.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|.+.|. +|++..|++.. .+.+.+++ ++. ..++.+
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga---~Vv~~~~~~~~---~~~~~~~i---------~~~---------g~~~~~ 60 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS---IVVAVELLEDR---LNQIVQEL---------RGM---------GKEVLG 60 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 5899999999999999999999999995 45677775321 22222222 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
+.+|+++ ++..+.++ ..+|++||+||... +. +.|+..+++|+.|+..+.+.+.. |
T Consensus 61 ~~~Dvt~-------~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 133 (254)
T 4fn4_A 61 VKADVSK-------KKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLK 133 (254)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999995 33333443 36999999999643 22 45788899999999999888755 3
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... .....|
T Consensus 134 ~~~G~IVnisS~~g~~~~--------------------------------------------------------~~~~~Y 157 (254)
T 4fn4_A 134 QGKGVIVNTASIAGIRGG--------------------------------------------------------FAGAPY 157 (254)
T ss_dssp HTCEEEEEECCGGGTCSS--------------------------------------------------------SSCHHH
T ss_pred cCCcEEEEEechhhcCCC--------------------------------------------------------CCChHH
Confidence 234689999997754221 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
..||+....+.+.. ..++.+..|-|+.|-.+..... +.+.-.....+.... . . ..-+.-.+
T Consensus 158 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~~----~--~------~~R~g~pe 223 (254)
T 4fn4_A 158 TVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS--SKPSELGMRTLTKLM----S--L------SSRLAEPE 223 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC--SSCCHHHHHHHHHHH----T--T------CCCCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccc--cCCcHHHHHHHHhcC----C--C------CCCCcCHH
Confidence 99999888877654 5689999999999876532111 001100011111100 0 0 00123468
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.+... --.|+++.+.+|
T Consensus 224 diA~~v~fLaSd~a~-~iTG~~i~VDGG 250 (254)
T 4fn4_A 224 DIANVIVFLASDEAS-FVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCcCCEEEeCCC
Confidence 999999988864432 234788888776
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-12 Score=130.65 Aligned_cols=227 Identities=15% Similarity=0.126 Sum_probs=146.0
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+.+-++||+++||||++.||+++++.|+++|. +|++..|++. ++++ ..++. ..
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga---~V~i~~r~~~------~l~~----------~~~~~--------g~ 75 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGA---RVFITGRRKD------VLDA----------AIAEI--------GG 75 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCHH------HHHH----------HHHHH--------CT
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHHH----------HHHHc--------CC
Confidence 34457899999999999999999999999995 4577777632 2221 11122 25
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK- 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~- 150 (570)
++..+.+|+++ ++..+.++ ..+|++||+||.... .+.|+..+++|+.|+..+.+.+..
T Consensus 76 ~~~~~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~ 148 (273)
T 4fgs_A 76 GAVGIQADSAN-------LAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148 (273)
T ss_dssp TCEEEECCTTC-------HHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred CeEEEEecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 67889999995 33333443 368999999997543 245888899999999999998865
Q ss_pred ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 151 ~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
|++-.++|.+||....... .....
T Consensus 149 m~~~G~IInisS~~~~~~~--------------------------------------------------------~~~~~ 172 (273)
T 4fgs_A 149 LARGSSVVLTGSTAGSTGT--------------------------------------------------------PAFSV 172 (273)
T ss_dssp EEEEEEEEEECCGGGGSCC--------------------------------------------------------TTCHH
T ss_pred HhhCCeEEEEeehhhccCC--------------------------------------------------------CCchH
Confidence 3334579999887654221 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..++.+..|-|+.|-.+......+ ........+...+.... |- .-+.-.
T Consensus 173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~~~~~~~----Pl-----gR~g~p 241 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAG--KDPVQQQGLLNALAAQV----PM-----GRVGRA 241 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-----------CHHHHHHHHHHHHHHS----TT-----SSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhc--cCchhhHHHHHHHHhcC----CC-----CCCcCH
Confidence 999999998887754 568999999999986643211110 00001111222221111 10 113446
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++.+... --.|+++.+.+|
T Consensus 242 eeiA~~v~FLaSd~a~-~iTG~~i~VDGG 269 (273)
T 4fgs_A 242 EEVAAAALFLASDDSS-FVTGAELFVDGG 269 (273)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CccCCeEeECcC
Confidence 8999999988864432 234788888776
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-12 Score=128.41 Aligned_cols=221 Identities=15% Similarity=0.107 Sum_probs=144.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|.+.|.. |++..|+.. ..+...+++ ++. ..++.+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~---Vvi~~~~~~---~~~~~~~~l---------~~~---------g~~~~~ 62 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGAR---VILNDIRAT---LLAESVDTL---------TRK---------GYDAHG 62 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEECCSCHH---HHHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHH---------Hhc---------CCcEEE
Confidence 58999999999999999999999999964 566666432 122222122 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c---
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (570)
+.+|+++ ++..+.+++ .+|++||+||..... +.|+..+++|+.|+..+.+.+.. |
T Consensus 63 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~ 135 (255)
T 4g81_D 63 VAFDVTD-------ELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIAR 135 (255)
T ss_dssp CCCCTTC-------HHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 9999995 333334432 589999999976432 45788899999999999987643 3
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... .....|
T Consensus 136 ~~~G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y 159 (255)
T 4g81_D 136 NSGGKIINIGSLTSQAAR--------------------------------------------------------PTVAPY 159 (255)
T ss_dssp TCCEEEEEECCGGGTSBC--------------------------------------------------------TTCHHH
T ss_pred cCCCEEEEEeehhhcCCC--------------------------------------------------------CCchhH
Confidence 134689999998765321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|-|+.|..+..+. +.+. ..+...+.... |- .-+.-.+
T Consensus 160 ~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~----~~~~~~~~~~~----Pl-----~R~g~pe 223 (255)
T 4g81_D 160 TAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTA---LIED----KQFDSWVKSST----PS-----QRWGRPE 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHH---HHTC----HHHHHHHHHHS----TT-----CSCBCGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhc---ccCC----HHHHHHHHhCC----CC-----CCCcCHH
Confidence 99999888877654 568999999999987653211 0111 11111111111 00 0123457
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.+... --.|+++.+.+|
T Consensus 224 diA~~v~fL~S~~a~-~iTG~~i~VDGG 250 (255)
T 4g81_D 224 ELIGTAIFLSSKASD-YINGQIIYVDGG 250 (255)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhC-CCcCCEEEECCC
Confidence 899999888754332 234788888765
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-14 Score=148.48 Aligned_cols=177 Identities=15% Similarity=0.058 Sum_probs=113.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQP----NVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~----~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|+||||+||||++|+..|++.|. .+..|.++.+..... ..+....++.. ..+
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~-~~~g~~~dl~~--------------------~~~ 62 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMK-ALEGVVMELED--------------------CAF 62 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHT--------------------TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchh-hccchhhhhhc--------------------ccc
Confidence 46899999999999999999998774 223667776643111 00100001100 011
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCce-EEEEEeccc-
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLK-VFVHVSTAY- 164 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-~fV~vSTa~- 164 (570)
.++ +|+.. ..+ ....++++|+|||+||..+- .....+.++.|+.+|+++++++++..+.+ +++++|+..
T Consensus 63 ~~~-~di~~------~~~-~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~ 134 (327)
T 1y7t_A 63 PLL-AGLEA------TDD-PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPAN 134 (327)
T ss_dssp TTE-EEEEE------ESC-HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred ccc-CCeEe------ccC-hHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchh
Confidence 122 46552 123 23667899999999998653 34567789999999999999999872143 666666432
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
+.. .+.++.. +.. ++.+.|+.||..+|++...
T Consensus 135 ~~~----~~~~~~~---~~~-----------------------------------------~p~~~yg~tkl~~er~~~~ 166 (327)
T 1y7t_A 135 TNA----LIAYKNA---PGL-----------------------------------------NPRNFTAMTRLDHNRAKAQ 166 (327)
T ss_dssp HHH----HHHHHTC---TTS-----------------------------------------CGGGEEECCHHHHHHHHHH
T ss_pred hhH----HHHHHHc---CCC-----------------------------------------ChhheeccchHHHHHHHHH
Confidence 110 0111000 000 2345799999999998876
Q ss_pred h--cCCCcEEEEeccccccCCCC
Q 008315 245 S--KENLSLVIIRPTIVSGTYKE 265 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~~ 265 (570)
+ ..+++.+++||+.|||+..+
T Consensus 167 ~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 167 LAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp HHHHHTCCGGGEECCEEEBCSST
T ss_pred HHHHhCcChhheeeeEEEcCCCC
Confidence 5 44899999999999998653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-13 Score=144.94 Aligned_cols=226 Identities=13% Similarity=0.107 Sum_probs=148.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCc----------ccHHHHHHHHHhhhhhHHHHHhhhc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADT----------ESAALRFQNEVLAKDLFNVLKEKWG 76 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~----------~~~~~rl~~~l~~~~~f~~l~~~~~ 76 (570)
.+-.++++|||||+|.||.++++.|.+.|.. +|+++ .|+... ....+.+.++ ++..
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~--~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~---------l~~~-- 313 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAG--HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAE---------LADL-- 313 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCC--EEEEEECCCC---------------CHHHHHH---------HHHH--
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCC--EEEEEeCCCCCCccccccccccCHHHHHHHHH---------HHhc--
Confidence 4557899999999999999999999999864 35565 676432 1111111111 1111
Q ss_pred ccccccccCceEEEEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHH
Q 008315 77 TRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIH 143 (570)
Q Consensus 77 ~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ 143 (570)
..++.++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+.+
T Consensus 314 -------g~~v~~~~~Dvtd-------~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~ 379 (525)
T 3qp9_A 314 -------GATATVVTCDLTD-------AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALH 379 (525)
T ss_dssp -------TCEEEEEECCTTS-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEEEECCCCC-------HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHH
Confidence 2578999999994 444456654 479999999986431 3467789999999999
Q ss_pred HHHHHHHcc---C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccc
Q 008315 144 LVNFAKKCV---K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 144 ll~~a~~~~---~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
+.+++.... + ..+||++||........
T Consensus 380 L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~------------------------------------------------- 410 (525)
T 3qp9_A 380 LDRLLREAAAAGGRPPVLVLFSSVAAIWGGA------------------------------------------------- 410 (525)
T ss_dssp HHHHHHHTC----CCCEEEEEEEGGGTTCCT-------------------------------------------------
T ss_pred HHHHhccccccCCCCCEEEEECCHHHcCCCC-------------------------------------------------
Confidence 999998752 1 78999999976643211
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCc
Q 008315 220 ERAKIHGWPNTYVFTKTMGEMIMQQS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKT 298 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~~v~~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
....|+.+|+..+.+..+. ..+++++.|.|+.+ .+ |+... ......+. ..|
T Consensus 411 -------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~t------gm~~~-~~~~~~~~--~~g----------- 462 (525)
T 3qp9_A 411 -------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EG------SRVTE-GATGERLR--RLG----------- 462 (525)
T ss_dssp -------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TT------SGGGS-SHHHHHHH--HTT-----------
T ss_pred -------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-cc------ccccc-hhhHHHHH--hcC-----------
Confidence 2357999999999987765 56899999999998 22 11111 01111111 111
Q ss_pred eeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHh
Q 008315 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGF 349 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~ 349 (570)
...++.+++++++..++.... ..+ +. ..+.|..+.....
T Consensus 463 -~~~l~pee~a~~l~~~l~~~~-----~~v--~v----~~~dw~~~~~~~~ 501 (525)
T 3qp9_A 463 -LRPLAPATALTALDTALGHGD-----TAV--TI----ADVDWSSFAPGFT 501 (525)
T ss_dssp -BCCBCHHHHHHHHHHHHHHTC-----SEE--EE----CCBCHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHhCCC-----CeE--EE----EeCCHHHHHhhcc
Confidence 134778999999998886321 122 22 2467777765543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=3.6e-12 Score=125.27 Aligned_cols=207 Identities=12% Similarity=0.134 Sum_probs=140.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|+|+||||++.||++++++|++.|.. |++..|++. ++. ++. ++ ..++..+.
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~---V~~~~~~~~------~~~-~~~---------~~---------~~~~~~~~ 53 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDK---VCFIDIDEK------RSA-DFA---------KE---------RPNLFYFH 53 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHH-HHH---------TT---------CTTEEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE---EEEEeCCHH------HHH-HHH---------Hh---------cCCEEEEE
Confidence 489999999999999999999999964 567777531 222 111 11 25688999
Q ss_pred ccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc--cCce
Q 008315 92 GDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--VKLK 155 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--~~lk 155 (570)
+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+++... ++-.
T Consensus 54 ~Dv~~-------~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G 126 (247)
T 3ged_A 54 GDVAD-------PLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKG 126 (247)
T ss_dssp CCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 99995 33333433 3699999999975432 457888999999999998887543 1236
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... .....|+.||
T Consensus 127 ~IInisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 150 (247)
T 3ged_A 127 RIINIASTRAFQSE--------------------------------------------------------PDSEAYASAK 150 (247)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTCHHHHHHH
T ss_pred cEEEEeecccccCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999997664321 1235799999
Q ss_pred HHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 236 TMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 236 ~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
+..+.+.+.. .+++.+..|-|+.|-.+..+. +.+ ..... .| ..-+.-.+|+|++
T Consensus 151 aal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~---~~~------~~~~~--------~P-----l~R~g~pediA~~ 208 (247)
T 3ged_A 151 GGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE---FTQ------EDCAA--------IP-----AGKVGTPKDISNM 208 (247)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------CCH------HHHHT--------ST-----TSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH---HHH------HHHhc--------CC-----CCCCcCHHHHHHH
Confidence 9888877653 568999999999886543211 111 11111 11 0113456899999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++.. .--.|+++.+.+|
T Consensus 209 v~fL~s~---~~iTG~~i~VDGG 228 (247)
T 3ged_A 209 VLFLCQQ---DFITGETIIVDGG 228 (247)
T ss_dssp HHHHHHC---SSCCSCEEEESTT
T ss_pred HHHHHhC---CCCCCCeEEECcC
Confidence 9988852 2334789998877
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=8.7e-12 Score=126.12 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=138.0
Q ss_pred cCCCEEEEECCc--cHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVT--GFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaT--GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+ |+||++++++|++.|.. |+++.|+.......+... ..-.+.+ ++.... ...+..
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~---V~~~~r~~~~~~~~~~~~-----~~~~~~~-~~~~~~---~~~~~~ 73 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWVPALNIFETSLR-----RGKFDQS-RVLPDG---SLMEIK 73 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEHHHHHHHHHHHH-----TTTTTGG-GBCTTS---SBCCEE
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCe---EEEeeccccchhhhhhhh-----hhHhhhh-hhhccc---cccccc
Confidence 589999999999 99999999999999964 567766421000000000 0000000 000000 000112
Q ss_pred EEEEccCCCC---CCCC--------------ChhhhHHHH---hCCccEEEEcCccCC-----cc----cCHHHHHHHHH
Q 008315 88 TFVAGDISSE---DLGL--------------KDSNLKEEL---WNELDVMVNSAAITK-----FD----ERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl~~~---~lgl--------------s~~~~~~~l---~~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv 138 (570)
..+.+|+... ++.. +-....+.+ ...+|++||+||... +. +.++..+++|+
T Consensus 74 ~~~~~~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 153 (297)
T 1d7o_A 74 KVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASS 153 (297)
T ss_dssp EEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred cccccceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhh
Confidence 3344443110 0000 011112222 237999999998532 21 34677899999
Q ss_pred HHHHHHHHHHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhc
Q 008315 139 LGAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+..+++++... ..-.++|++||........
T Consensus 154 ~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------------------------------------------- 186 (297)
T 1d7o_A 154 YSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------------------------------------------- 186 (297)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------------------------------------------
T ss_pred hHHHHHHHHHHHHhccCceEEEEeccccccCCC-----------------------------------------------
Confidence 9999999999763 2226899999976543210
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCce
Q 008315 218 GTERAKIHGWPNTYVFTKTMGEMIMQQS----K--ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPC 291 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~ 291 (570)
++...|+.||+..+.+.+.. . .++.+..++|+.|.++..... .....+........
T Consensus 187 --------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~--- 248 (297)
T 1d7o_A 187 --------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA--- 248 (297)
T ss_dssp --------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS---
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-------cccHHHHHHhhccC---
Confidence 11247999999999887654 2 589999999999988654321 00111111111111
Q ss_pred eecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 292 LVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+ ...+...+|+|++++.++.... ..-.++++++.++
T Consensus 249 -p-----~~r~~~pedvA~~v~~l~s~~~-~~itG~~i~vdgG 284 (297)
T 1d7o_A 249 -P-----IQKTLTADEVGNAAAFLVSPLA-SAITGATIYVDNG 284 (297)
T ss_dssp -S-----SCCCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred -C-----CCCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCC
Confidence 0 1124678999999988875332 2224789999876
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.7e-12 Score=122.51 Aligned_cols=219 Identities=14% Similarity=0.098 Sum_probs=145.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||+++++.|.+.|. +|++..|+... ...+.+. +. ..++..
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga---~Vvi~~r~~~~-~~~~~~~-------------~~---------g~~~~~ 60 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA---EVVCAARRAPD-ETLDIIA-------------KD---------GGNASA 60 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSCCH-HHHHHHH-------------HT---------TCCEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC---EEEEEeCCcHH-HHHHHHH-------------Hh---------CCcEEE
Confidence 6899999999999999999999999995 45677776532 1111111 11 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-cc---CceE
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-CV---KLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~---~lk~ 156 (570)
+.+|++++. + .+.++ ..+|+++|+||.... .+.|+..+++|+.|+..+.+.+.. |. +-.+
T Consensus 61 ~~~Dv~d~~------~-v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~ 133 (247)
T 4hp8_A 61 LLIDFADPL------A-AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGK 133 (247)
T ss_dssp EECCTTSTT------T-TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred EEccCCCHH------H-HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcE
Confidence 999999653 1 22332 359999999998643 245888899999999999987643 41 2368
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... .....|..||+
T Consensus 134 IVnisS~~~~~g~--------------------------------------------------------~~~~~Y~asKa 157 (247)
T 4hp8_A 134 VVNIASLLSFQGG--------------------------------------------------------IRVPSYTAAKH 157 (247)
T ss_dssp EEEECCGGGTSCC--------------------------------------------------------SSCHHHHHHHH
T ss_pred EEEEechhhCCCC--------------------------------------------------------CCChHHHHHHH
Confidence 9999997654221 11357999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
....+.+.. ..++.+..|-|+.|-.+..+. ..........+.... | ..-+--.+|+|++
T Consensus 158 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~-------~~~~~~~~~~~~~~~----P-----lgR~g~peeiA~~ 221 (247)
T 4hp8_A 158 GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEA-------LRADAARNKAILERI----P-----AGRWGHSEDIAGA 221 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH-------HHTSHHHHHHHHTTC----T-----TSSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhh-------cccCHHHHHHHHhCC----C-----CCCCcCHHHHHHH
Confidence 888887654 568999999999986643211 111011111122111 1 1113345899999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++.++.+... --.|+++.+.+|
T Consensus 222 v~fLaSd~a~-~iTG~~i~VDGG 243 (247)
T 4hp8_A 222 AVFLSSAAAD-YVHGAILNVDGG 243 (247)
T ss_dssp HHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHhCchhc-CCcCCeEEECcc
Confidence 9988764332 234788888765
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-12 Score=127.30 Aligned_cols=217 Identities=12% Similarity=0.095 Sum_probs=132.9
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-E--ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-I--RAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-v--R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
||+|+||||+|+||++++++|+++|+. |+++ . |+... .+.+.+ +. ....
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~~~~r~~~~---~~~~~~-------------~~---------~~~~ 52 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYT---VVCHDASFADAAE---RQRFES-------------EN---------PGTI 52 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSHHH---HHHHHH-------------HS---------TTEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE---EEEecCCcCCHHH---HHHHHH-------------Hh---------CCCc
Confidence 589999999999999999999999964 5666 4 65321 111111 10 0111
Q ss_pred EEEccCCCCCCCCChhhhHHHHh---CCccEEEEcCccCCc----------ccCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW---NELDVMVNSAAITKF----------DERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~---~~vdiVih~Aa~v~f----------~~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+. |..+ -....+.+. ..+|++||+||.... .+.++..+++|+.|+.++++++... .
T Consensus 53 ~~--~~~~------v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 124 (244)
T 1zmo_A 53 AL--AEQK------PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA 124 (244)
T ss_dssp EC--CCCC------GGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred cc--CHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 11 2221 122233332 369999999997544 1346778999999999999988532 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+..++|++||...+... .....|+
T Consensus 125 ~~g~iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 148 (244)
T 1zmo_A 125 GGASVIFITSSVGKKPL--------------------------------------------------------AYNPLYG 148 (244)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCTTHH
T ss_pred CCcEEEEECChhhCCCC--------------------------------------------------------CCchHHH
Confidence 45789999998765321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+.+++|+.|-.+.... | ...... ......... ..+ ...+...++
T Consensus 149 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~-~~~~~~-~~~~~~~~~---~~p-----~~r~~~pe~ 215 (244)
T 1zmo_A 149 PARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP---T-SDWENN-PELRERVDR---DVP-----LGRLGRPDE 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC---H-HHHHHC-HHHHHHHHH---HCT-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc---c-ccccch-HHHHHHHhc---CCC-----CCCCcCHHH
Confidence 9999999988764 358999999999986643200 0 000000 111111100 000 113567899
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... .-.++++.+.++
T Consensus 216 vA~~v~~l~s~~~~-~~tG~~i~vdgG 241 (244)
T 1zmo_A 216 MGALITFLASRRAA-PIVGQFFAFTGG 241 (244)
T ss_dssp HHHHHHHHHTTTTG-GGTTCEEEESTT
T ss_pred HHHHHHHHcCcccc-CccCCEEEeCCC
Confidence 99999988763221 123678887765
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-11 Score=121.52 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=144.2
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+| .||+++++.|.+.|. +|++..|+.... +.+.+++. +.+ ..++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga---~Vvi~~r~~~~~---~~~~~~~~----------~~~-------~~~~ 60 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGA---KLVFTYRKERSR---KELEKLLE----------QLN-------QPEA 60 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTC---EEEEEESSGGGH---HHHHHHHG----------GGT-------CSSC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHHHHH----------hcC-------CCcE
Confidence 5899999999987 899999999999995 457777865432 22221111 111 2468
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------c----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------D----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|++++ ++ .+.++ ..+|++||+||.... . +.+...+++|+.++..+.+.+.
T Consensus 61 ~~~~~Dv~~~------~~-v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T 4fs3_A 61 HLYQIDVQSD------EE-VINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAK 133 (256)
T ss_dssp EEEECCTTCH------HH-HHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred EEEEccCCCH------HH-HHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999952 22 23333 369999999997532 1 2345567899999998888776
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. ++-.++|.+||....... ...
T Consensus 134 ~~~~~~G~IVnisS~~~~~~~--------------------------------------------------------~~~ 157 (256)
T 4fs3_A 134 KLMPEGGSIVATTYLGGEFAV--------------------------------------------------------QNY 157 (256)
T ss_dssp TTCTTCEEEEEEECGGGTSCC--------------------------------------------------------TTT
T ss_pred HHhccCCEEEEEeccccccCc--------------------------------------------------------ccc
Confidence 53 233689999987654221 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|-|+.|-.+..+...+ .......+.... |- .-+.
T Consensus 158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~-------~~~~~~~~~~~~----Pl-----~R~g 221 (256)
T 4fs3_A 158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG-------FNTILKEIKERA----PL-----KRNV 221 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-------HHHHHHHHHHHS----TT-----SSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC-------CHHHHHHHHhcC----CC-----CCCc
Confidence 57999999888877654 568999999999887654322211 112222221111 10 1134
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|||++++.++.+... --.|+++.+.+|
T Consensus 222 ~peevA~~v~fL~Sd~a~-~iTG~~i~VDGG 251 (256)
T 4fs3_A 222 DQVEVGKTAAYLLSDLSS-GVTGENIHVDSG 251 (256)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhc-CccCCEEEECcC
Confidence 568999999988864332 234788888776
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-11 Score=122.28 Aligned_cols=219 Identities=15% Similarity=0.142 Sum_probs=140.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||++.||+++++.|++.|. +|++..|++... ..+...
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~~~-------------------------------~~~~~~ 54 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGA---QVLTTARARPEG-------------------------------LPEELF 54 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTC---EEEEEESSCCTT-------------------------------SCTTTE
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCC---EEEEEECCchhC-------------------------------CCcEEE
Confidence 5899999999999999999999999996 457888865321 122346
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-----FD----ERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
+.+|+++ ++..+.++ ..+|++||+||... +. +.++..+++|+.|+..+.+.+.. |
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 127 (261)
T 4h15_A 55 VEADLTT-------KEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMV 127 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEcCCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhh
Confidence 8899995 33233333 36999999998642 22 45778899999999999887754 2
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+||........ .....
T Consensus 128 ~~~~G~Iv~isS~~~~~~~~-------------------------------------------------------~~~~~ 152 (261)
T 4h15_A 128 ARGSGVVVHVTSIQRVLPLP-------------------------------------------------------ESTTA 152 (261)
T ss_dssp HHTCEEEEEECCGGGTSCCT-------------------------------------------------------TTCHH
T ss_pred hcCCceEEEEEehhhccCCC-------------------------------------------------------CccHH
Confidence 2446899999876532110 12356
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcc-----ccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWV-----EDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~-----~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..+.+.+.. ..++.+..|-|+.|-.+......... .........+...... .| ..
T Consensus 153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~P-----lg 223 (261)
T 4h15_A 153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG----IP-----LG 223 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC----CT-----TS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC----CC-----CC
Confidence 999999888877654 56899999999988654211000000 0000011111111111 11 11
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
-+.-.+|+|++++.++.+... --.|+++++.+|
T Consensus 224 R~g~peevA~~v~fLaS~~a~-~itG~~i~VDGG 256 (261)
T 4h15_A 224 RPAKPEEVANLIAFLASDRAA-SITGAEYTIDGG 256 (261)
T ss_dssp SCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhc-CccCcEEEECCc
Confidence 234578999999988754332 234788888776
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.32 E-value=9e-12 Score=138.57 Aligned_cols=209 Identities=11% Similarity=0.117 Sum_probs=127.7
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhccccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD------TESAALRFQNEVLAKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~ 82 (570)
-++||+++||||+|+||+++++.|+++|. +|+++.|... .....+.+.++ ++...
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga---~Vv~~~r~~~~~~~~~~~~~~~~~~~~---------i~~~~------- 76 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGA---KVVVNDLGGTHSGDGASQRAADIVVDE---------IRKAG------- 76 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEC--------------CHHHHHHH---------HHHTT-------
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcccccccCCHHHHHHHHHH---------HHHhC-------
Confidence 46899999999999999999999999995 4566666211 11111111111 11110
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHH
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a 148 (570)
.. +.+|+++. ++ .+.+++ .+|++||+||..... +.++..+++|+.|+..+++++
T Consensus 77 --~~---~~~D~~d~------~~-~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~ 144 (613)
T 3oml_A 77 --GE---AVADYNSV------ID-GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAA 144 (613)
T ss_dssp --CC---EEECCCCG------GG-HHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --Ce---EEEEeCCH------HH-HHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 23688752 22 234443 589999999986431 347788999999999999988
Q ss_pred HH-c--cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccC
Q 008315 149 KK-C--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIH 225 (570)
Q Consensus 149 ~~-~--~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 225 (570)
.. | .+-.++|++||.......
T Consensus 145 ~p~m~~~~~g~IV~isS~a~~~~~-------------------------------------------------------- 168 (613)
T 3oml_A 145 FPYMKKQNYGRIIMTSSNSGIYGN-------------------------------------------------------- 168 (613)
T ss_dssp HHHHHTTTCEEEEEECCHHHHHCC--------------------------------------------------------
T ss_pred HHHHHHcCCCEEEEECCHHHcCCC--------------------------------------------------------
Confidence 43 2 245789999997543211
Q ss_pred CCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCcee
Q 008315 226 GWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 226 ~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
.....|+.||+..+.+.+.. ..++.+..|.|+.+..... ++.. . ...
T Consensus 169 ~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----~~~~-----~-------------------~~~ 220 (613)
T 3oml_A 169 FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----GILP-----D-------------------ILF 220 (613)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------C----CCCC-----H-------------------HHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh----hccc-----h-------------------hhh
Confidence 12357999999999888764 4589999999986532111 1000 0 011
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+..+++|++++.++... ....|.++++.+|
T Consensus 221 ~~~~pedvA~~v~~L~s~~--~~~tG~~i~vdGG 252 (613)
T 3oml_A 221 NELKPKLIAPVVAYLCHES--CEDNGSYIESAAG 252 (613)
T ss_dssp TTCCGGGTHHHHHHTTSTT--CCCCSCEEEEETT
T ss_pred hcCCHHHHHHHHHHhcCCC--cCCCceEEEECCC
Confidence 2246788999988877533 2234788888776
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.25 E-value=6e-11 Score=121.25 Aligned_cols=157 Identities=11% Similarity=0.037 Sum_probs=82.0
Q ss_pred CCccEEEEcCccCC-----cc----cCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEEecccccCCCCCeeccccCCCC
Q 008315 112 NELDVMVNSAAITK-----FD----ERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGA 181 (570)
Q Consensus 112 ~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~ 181 (570)
..+|++||+||... +. +.++..+++|+.|+..+++++... ..-.++|++||........
T Consensus 132 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------- 200 (319)
T 2ptg_A 132 GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP----------- 200 (319)
T ss_dssp SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------
T ss_pred CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC-----------
Confidence 37999999998541 21 346778999999999999998753 2226899999976542110
Q ss_pred CCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEe
Q 008315 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS----K--ENLSLVIIR 255 (570)
Q Consensus 182 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~lp~~IvR 255 (570)
++...|+.||+..+.+.+.. . .++.+..|+
T Consensus 201 --------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~ 236 (319)
T 2ptg_A 201 --------------------------------------------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCIS 236 (319)
T ss_dssp --------------------------------------------------------THHHHHHHHHHHHHHHCCEEEEEE
T ss_pred --------------------------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEe
Confidence 11246999998888877643 2 589999999
Q ss_pred ccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 256 PTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 256 PsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+.|..+.....+. . ....+.... ...+ .......-+...+++|++++.++.... ..-.|+++.+.++
T Consensus 237 PG~v~T~~~~~~~~---~--~~~~~~~~~----~~~~-~~~~p~~r~~~peevA~~v~~L~s~~~-~~itG~~i~vdGG 304 (319)
T 2ptg_A 237 AGPLKSRAASAIGK---A--GDKTFIDLA----IDYS-EANAPLQKELESDDVGRAALFLLSPLA-RAVTGATLYVDNG 304 (319)
T ss_dssp ECCCC-----------------------------------------CCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred eCCccChhhhhccc---c--cchhhHHHH----HHHH-hccCCCCCCCCHHHHHHHHHHHhCccc-CCccCCEEEECCC
Confidence 99987653211100 0 000000000 0000 000011234678999999998876332 2234788888776
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=132.04 Aligned_cols=167 Identities=16% Similarity=0.193 Sum_probs=122.6
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHH-HhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll-~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
|-.+++++||||+|.||+++++.|. +.|. ++|+++.|+.......+.+.+++. . . ..++
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~---------~-~--------G~~v 586 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGV--RNLVLVSRRGPAASGAAELVAQLT---------A-Y--------GAEV 586 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSC--CEEEEEESSGGGSTTHHHHHHHHH---------H-T--------TCEE
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCC--cEEEEeccCccchHHHHHHHHHHH---------h-c--------CCcE
Confidence 4468999999999999999999999 6774 467888997544333333222221 1 1 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (570)
.++.+|+++ .+..+.+++ .+|+|||+|+..... +.++..+++|+.|+.++.+++. +.+
T Consensus 587 ~~~~~Dvsd-------~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~--~~l 657 (795)
T 3slk_A 587 SLQACDVAD-------RETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID--PDV 657 (795)
T ss_dssp EEEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC--TTS
T ss_pred EEEEeecCC-------HHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh--hCC
Confidence 999999995 443445554 479999999986421 4577889999999999999883 355
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
+||.+||....-... ....|+.+
T Consensus 658 -~iV~~SS~ag~~g~~--------------------------------------------------------g~~~YaAa 680 (795)
T 3slk_A 658 -ALVLFSSVSGVLGSG--------------------------------------------------------GQGNYAAA 680 (795)
T ss_dssp -EEEEEEETHHHHTCS--------------------------------------------------------SCHHHHHH
T ss_pred -EEEEEccHHhcCCCC--------------------------------------------------------CCHHHHHH
Confidence 899999976542211 13579999
Q ss_pred HHHHHHHHHHh-cCCCcEEEEecccccc
Q 008315 235 KTMGEMIMQQS-KENLSLVIIRPTIVSG 261 (570)
Q Consensus 235 K~~aE~~v~~~-~~~lp~~IvRPsiV~g 261 (570)
|+..+.+..+. ..|+++..|-|+.+-.
T Consensus 681 ka~~~alA~~~~~~Gi~v~sI~pG~v~t 708 (795)
T 3slk_A 681 NSFLDALAQQRQSRGLPTRSLAWGPWAE 708 (795)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCeECc
Confidence 99999988876 6789999999998754
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.16 E-value=9.7e-10 Score=112.82 Aligned_cols=184 Identities=10% Similarity=0.019 Sum_probs=114.7
Q ss_pred CCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhc-ccccccccCce
Q 008315 11 ENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWG-TRLNSFISEKI 87 (570)
Q Consensus 11 ~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~-~~~~~~~~~kv 87 (570)
++|+++||||++ .||.+++++|++.|.. |++..|+.... ...|-. ++++.... ..........+
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~---Vv~~~~~~~~~-l~~r~~---------~~~~~~~~~~~~~~~~~~~~ 67 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVYN-IFMKNY---------KNGKFDNDMIIDKDKKMNIL 67 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECHHHHH-HHHHHH---------HTTTTTGGGBCSSSCBCCEE
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCE---EEEEecCcccc-ccccch---------HHHHHHHHHHHhhccccccc
Confidence 479999999875 9999999999999964 46655542100 001100 00000000 00000012347
Q ss_pred EEEEccCCCCCCC-------------CChhhhHHHHh-------CCccEEEEcCccCC-----c----ccCHHHHHHHHH
Q 008315 88 TFVAGDISSEDLG-------------LKDSNLKEELW-------NELDVMVNSAAITK-----F----DERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl~~~~lg-------------ls~~~~~~~l~-------~~vdiVih~Aa~v~-----f----~~~~~~~~~~Nv 138 (570)
.++.+|++..... +++.+..+.++ ..+|++||+||... + .+.++..+++|+
T Consensus 68 ~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~ 147 (329)
T 3lt0_A 68 DMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSS 147 (329)
T ss_dssp EEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHh
Confidence 8899999976211 11111222222 36999999999631 1 134677899999
Q ss_pred HHHHHHHHHHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhc
Q 008315 139 LGAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+..+.+++... ..-.++|++||.......
T Consensus 148 ~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~------------------------------------------------ 179 (329)
T 3lt0_A 148 YSLISLCKYFVNIMKPQSSIISLTYHASQKVV------------------------------------------------ 179 (329)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEECGGGTSCC------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhCCeEEEEeCccccCCC------------------------------------------------
Confidence 9999999988653 222589999997654321
Q ss_pred cccccccCCCC-chHHHHHHHHHHHHHHh-----c-CCCcEEEEeccccccCC
Q 008315 218 GTERAKIHGWP-NTYVFTKTMGEMIMQQS-----K-ENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 218 g~~~~~~~~~~-n~Y~~sK~~aE~~v~~~-----~-~~lp~~IvRPsiV~g~~ 263 (570)
... ..|+.||+..+.+.+.. . .++.+..+.|+.|-.+.
T Consensus 180 --------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~ 224 (329)
T 3lt0_A 180 --------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224 (329)
T ss_dssp --------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence 112 27999999888877643 3 58999999999987653
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.4e-10 Score=116.56 Aligned_cols=247 Identities=13% Similarity=0.032 Sum_probs=135.7
Q ss_pred cCCCEEEEECC--ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGV--TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGa--TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++|||| +|+||++++++|++.|. +|+++.|+... .|..+.. .....+.++ +.... .....+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~---~Vv~~~r~~~~----~~~~~~~-~~~~~~~~~-~~~~~---~~~~~~ 74 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGA---RVALGTWPPVL----GLFQKSL-QSGRLDEDR-KLPDG---SLIEFA 74 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTC---EEEEEECHHHH----HHHHHHH-HHTTTHHHH-BCTTS---CBCCCS
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCC---EEEEEeccccc----chhhhhh-hhhhhhhhh-hhhcc---cccccc
Confidence 68999999999 89999999999999996 45677664210 0000000 000001111 00000 000012
Q ss_pred EEEEccC--CCCC-CC--C------------ChhhhHHHH---hCCccEEEEcCccCC-----cc----cCHHHHHHHHH
Q 008315 88 TFVAGDI--SSED-LG--L------------KDSNLKEEL---WNELDVMVNSAAITK-----FD----ERYDVAFGINT 138 (570)
Q Consensus 88 ~~v~gDl--~~~~-lg--l------------s~~~~~~~l---~~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv 138 (570)
..+.+|+ +++. +. + +-....+.+ +..+|++||+||... +. +.++..+++|+
T Consensus 75 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~ 154 (315)
T 2o2s_A 75 GVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSA 154 (315)
T ss_dssp CEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhh
Confidence 3344433 2211 00 0 011122222 237999999999542 21 34677899999
Q ss_pred HHHHHHHHHHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhc
Q 008315 139 LGAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNL 217 (570)
Q Consensus 139 ~gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (570)
.|+..+++++... ..-.++|++||........
T Consensus 155 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------------------------------------------- 187 (315)
T 2o2s_A 155 YSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP----------------------------------------------- 187 (315)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT-----------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecccccccCC-----------------------------------------------
Confidence 9999999998653 2226899999986543211
Q ss_pred cccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCce
Q 008315 218 GTERAKIHGWPNTYVFTKTMGEMIMQQS----K--ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPC 291 (570)
Q Consensus 218 g~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~ 291 (570)
++...|+.||+..+.+.+.. . .++.+..|+|+.|..+........... .....+...+...
T Consensus 188 --------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~---- 254 (315)
T 2o2s_A 188 --------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK-SFIDYAIDYSYNN---- 254 (315)
T ss_dssp --------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS-CHHHHHHHHHHHH----
T ss_pred --------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc-hhHHHHHHHHhcc----
Confidence 12247999999888887643 2 589999999999866421110000000 0000111001000
Q ss_pred eecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 292 LVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 292 ~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+ ..-+...+++|++++.++.... ..-.|+++.+.++
T Consensus 255 ~p-----~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG 291 (315)
T 2o2s_A 255 AP-----LRRDLHSDDVGGAALFLLSPLA-RAVSGVTLYVDNG 291 (315)
T ss_dssp SS-----SCCCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred CC-----CCCCCCHHHHHHHHHHHhCchh-ccCcCCEEEECCC
Confidence 00 1124578999999998875332 2234788888776
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2e-09 Score=129.44 Aligned_cols=167 Identities=16% Similarity=0.108 Sum_probs=112.2
Q ss_pred cCCCEEEEECCccH-hHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGF-VAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+||||||+|. ||.++++.|++.|.. |+++.|..... .+...++ +..+.+. ...++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~---VVl~~~R~~~~--l~~~a~e---------L~~el~~-----~G~~v~ 710 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAK---VIVTTSRFSRQ--VTEYYQG---------IYARCGA-----RGSQLV 710 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCE---EEEEESSCCHH--HHHHHHH---------HHHHHCC-----TTCEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCE---EEEEecCChHH--HHHHHHH---------HHHHhhc-----cCCeEE
Confidence 67999999999999 999999999999864 55654432211 1111111 1112110 024688
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-----------CccEEEEcCccCCcc----------cCHHHHHHHHHHHHHHHHHH
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-----------ELDVMVNSAAITKFD----------ERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-----------~vdiVih~Aa~v~f~----------~~~~~~~~~Nv~gt~~ll~~ 147 (570)
++.+|+++ .+..+.+++ .+|+|||+||..... +.++..+++|+.|+..++++
T Consensus 711 ~v~~DVsd-------~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a 783 (1878)
T 2uv9_A 711 VVPFNQGS-------KQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKT 783 (1878)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEEcCCCC-------HHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999995 333334331 589999999975321 34577899999999999887
Q ss_pred HHHccC-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 148 AKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 148 a~~~~~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++..+. ..+||.+||......
T Consensus 784 ~~~lp~M~~~~~G~IVnISS~ag~~g------------------------------------------------------ 809 (1878)
T 2uv9_A 784 QKKERGYETRPAQVILPLSPNHGTFG------------------------------------------------------ 809 (1878)
T ss_dssp HHHHHTCCSCCEEECCEECSCSSSSS------------------------------------------------------
T ss_pred HHHhHHHHhCCCCEEEEEcchhhccC------------------------------------------------------
Confidence 543322 258999999653211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccc
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVS 260 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~ 260 (570)
....|+.||+..+.++... ...++++.|.|+.|-
T Consensus 810 ----g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 810 ----NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp ----CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1346999999999886532 334899999999886
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=3.5e-09 Score=127.59 Aligned_cols=167 Identities=17% Similarity=0.150 Sum_probs=113.4
Q ss_pred cCCCEEEEECCccH-hHHHHHHHHHHhCCCccEEEEE-EecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTGF-VAKVFIEKILRVQPNVKKLYLL-IRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||+++||||+|. ||.++++.|++.|. +|+++ .|+... .+.+. +.+.++.+. ...++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA---~Vvl~~~R~~~~---l~~~~---------~eL~~~~~~-----~g~~v 732 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGA---KVVVTTSRFSKQ---VTDYY---------QSIYAKYGA-----KGSTL 732 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTC---EEEEEESSCCHH---HHHHH---------HHHHHHHCC-----TTCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCCHHH---HHHHH---------HHHHHHhhc-----CCCeE
Confidence 67999999999999 99999999999996 44565 344321 11111 112222211 02468
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh----C---------CccEEEEcCccCCcc----------cCHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW----N---------ELDVMVNSAAITKFD----------ERYDVAFGINTLGAIHL 144 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~----~---------~vdiVih~Aa~v~f~----------~~~~~~~~~Nv~gt~~l 144 (570)
.++.+|+++ .+..+.++ + .+|++||+||..... +.++..+++|+.|+..+
T Consensus 733 ~~v~~DVsd-------~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l 805 (1887)
T 2uv8_A 733 IVVPFNQGS-------KQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGC 805 (1887)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHH
T ss_pred EEEEecCCC-------HHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHH
Confidence 899999995 33233333 1 589999999975322 23567799999999999
Q ss_pred HHHHHHccC-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccc
Q 008315 145 VNFAKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 145 l~~a~~~~~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
+++++..+. -.+||.+||......
T Consensus 806 ~~a~~~lp~m~~~~~G~IVnISS~ag~~g--------------------------------------------------- 834 (1887)
T 2uv8_A 806 VKKQKSARGIETRPAQVILPMSPNHGTFG--------------------------------------------------- 834 (1887)
T ss_dssp HHHHHHTTTCCSCCEEEEEEECSCTTCSS---------------------------------------------------
T ss_pred HHHHHhhhhhhhCCCCEEEEEcChHhccC---------------------------------------------------
Confidence 998854432 258999998754311
Q ss_pred cccccCCCCchHHHHHHHHHHH-HHHh----cCCCcEEEEecccccc
Q 008315 220 ERAKIHGWPNTYVFTKTMGEMI-MQQS----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~~-v~~~----~~~lp~~IvRPsiV~g 261 (570)
....|+.||+..+.+ .+.. ...+.++.|.|+.|-+
T Consensus 835 -------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 -------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp -------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 124699999999988 3322 3338899999999874
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-09 Score=126.26 Aligned_cols=170 Identities=16% Similarity=0.141 Sum_probs=111.3
Q ss_pred cCCCEEEEECCccH-hHHHHHHHHHHhCCCccEEEEE-EecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 10 LENKIILVSGVTGF-VAKVFIEKILRVQPNVKKLYLL-IRAADTES-AALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++||+|+||||+|. ||+++++.|++.|.. |+++ .|+..... ..+. + .++.+. ...+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~---VVL~~~R~~e~lee~a~e----L---------~ael~a-----~Ga~ 532 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAK---VVVTTSRFSKQVTDYYQS----I---------YAKYGA-----KGST 532 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCE---EEEEESSCSTTTTTHHHH----T---------TTTTCC-----TTCE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCE---EEEEeCCCHHHHHHHHHH----H---------HHHhhc-----CCCe
Confidence 57999999999998 999999999999964 4565 35433221 1111 1 111110 0246
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC---------CccEEEEcCccCCcc----------cCHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN---------ELDVMVNSAAITKFD----------ERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~---------~vdiVih~Aa~v~f~----------~~~~~~~~~Nv~gt~~ll~~ 147 (570)
+.++.+|+++++- -....+.+.+ .+|++||+||..... +.++..+++|+.|+..++++
T Consensus 533 V~vV~~DVTD~es---VeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqa 609 (1688)
T 2pff_A 533 LIVVPFNQGSKQD---VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKK 609 (1688)
T ss_dssp EEEEECCSSSTTH---HHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHH---HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999996420 0111112222 589999999975322 23567789999999999998
Q ss_pred HHHccC-----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccc
Q 008315 148 AKKCVK-----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERA 222 (570)
Q Consensus 148 a~~~~~-----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 222 (570)
++..+. -.+||.+||......
T Consensus 610 a~~lp~M~krggGrIVnISSiAG~~G------------------------------------------------------ 635 (1688)
T 2pff_A 610 QKSARGIETRPAQVILPMSPNHGTFG------------------------------------------------------ 635 (1688)
T ss_dssp HHHHHTCTTSCEEECCCCCSCTTTSS------------------------------------------------------
T ss_pred HHhChHHHhCCCCEEEEEEChHhccC------------------------------------------------------
Confidence 844322 257999998643211
Q ss_pred ccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEecccccc
Q 008315 223 KIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 223 ~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g 261 (570)
....|+.||+..+.++.+. ...+.+..|.|+.|-+
T Consensus 636 ----g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 636 ----GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp ----CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 1347999999999984332 2337788888988874
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=4.2e-08 Score=101.84 Aligned_cols=171 Identities=10% Similarity=-0.039 Sum_probs=110.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHH-hCCCccEEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILR-VQPNVKKLYLLIRAADTESA---------ALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~-~g~~V~~i~~lvR~~~~~~~---------~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
.+|++|||||++.||.++++.|.+ .|.. |+++.|.+..... .+.+.++ ++ ..
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~---Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~---------~~-~~----- 107 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGAD---TLGVFFERPGEEGKPGTSGWYNSAAFHKF---------AA-QK----- 107 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCE---EEEEECCCCCBTTBCCCHHHHHHHHHHHH---------HH-HT-----
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCE---EEEEeCCchhhhhhcccccchhHHHHHHH---------HH-hc-----
Confidence 579999999999999999999999 9954 4666776543210 0111101 11 11
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccC----------------Cc-----------
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAIT----------------KF----------- 126 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v----------------~f----------- 126 (570)
..++..+.+|+++ ++..+.++ ..+|++||+||.. .+
T Consensus 108 ---G~~a~~i~~Dvtd-------~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~ 177 (405)
T 3zu3_A 108 ---GLYAKSINGDAFS-------DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDT 177 (405)
T ss_dssp ---TCCEEEEESCTTS-------HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEET
T ss_pred ---CCceEEEECCCCC-------HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccc
Confidence 2467889999995 33233333 3689999999863 11
Q ss_pred --------------ccCHHHHHHHHHHHHH-HHHHHHHH--cc-CceEEEEEecccccCCCCCeeccccCCCCCCCChHH
Q 008315 127 --------------DERYDVAFGINTLGAI-HLVNFAKK--CV-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDA 188 (570)
Q Consensus 127 --------------~~~~~~~~~~Nv~gt~-~ll~~a~~--~~-~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~ 188 (570)
.+.++..+++|..++. .+++.+.. +. +-.++|.+||........
T Consensus 178 ~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p------------------ 239 (405)
T 3zu3_A 178 DKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD------------------ 239 (405)
T ss_dssp TTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT------------------
T ss_pred cccccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC------------------
Confidence 1346667788887775 55555432 21 114788888865421100
Q ss_pred HHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----cC-CCcEEEEeccccccC
Q 008315 189 EMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KE-NLSLVIIRPTIVSGT 262 (570)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~-~lp~~IvRPsiV~g~ 262 (570)
..+..+|+.||+..+.+.+.. .. |+.+..+-|+.|-.+
T Consensus 240 ------------------------------------~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 240 ------------------------------------IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp ------------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred ------------------------------------CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 012368999999999887654 45 899999999988664
Q ss_pred C
Q 008315 263 Y 263 (570)
Q Consensus 263 ~ 263 (570)
.
T Consensus 284 ~ 284 (405)
T 3zu3_A 284 A 284 (405)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-08 Score=111.70 Aligned_cols=207 Identities=13% Similarity=0.200 Sum_probs=132.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||+++++.|.+.|.. |++..|... +.+.+++ ++. ..++..
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~-----~~~~~~i---------~~~---------g~~~~~ 373 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAK---VVVNDFKDA-----TKTVDEI---------KAA---------GGEAWP 373 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEECSSCC-----HHHHHHH---------HHT---------TCEEEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCE---EEEEeCccH-----HHHHHHH---------Hhc---------CCeEEE
Confidence 67999999999999999999999999964 455554321 1111122 110 135667
Q ss_pred EEccC-CCCCCCCChhhhHHHH---hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cCce
Q 008315 90 VAGDI-SSEDLGLKDSNLKEEL---WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VKLK 155 (570)
Q Consensus 90 v~gDl-~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk 155 (570)
+.+|+ ++ .+...+.+ +..+|++||+||..... +.++..+++|+.|+..+.+++.. | .+-.
T Consensus 374 ~~~Dv~~~------~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 447 (604)
T 2et6_A 374 DQHDVAKD------SEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG 447 (604)
T ss_dssp ECCCHHHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE
T ss_pred EEcChHHH------HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 78888 42 12222233 34799999999975421 34778899999999999988754 2 1336
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... .....|+.||
T Consensus 448 ~IVnisS~ag~~~~--------------------------------------------------------~~~~~Y~asK 471 (604)
T 2et6_A 448 RIINITSTSGIYGN--------------------------------------------------------FGQANYSSSK 471 (604)
T ss_dssp EEEEECCHHHHSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred EEEEECChhhccCC--------------------------------------------------------CCChhHHHHH
Confidence 89999997543211 0135799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+.+.. ..++.+..|-|+. .+ +. .... .. +...+....+++|+
T Consensus 472 aal~~lt~~la~El~~~gIrVn~v~PG~--~T---~m---~~~~------~~--------------~~~~~~~~pe~vA~ 523 (604)
T 2et6_A 472 AGILGLSKTMAIEGAKNNIKVNIVAPHA--ET---AM---TLSI------MR--------------EQDKNLYHADQVAP 523 (604)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECC--CC---CC--------------------------------CCSSCGGGTHH
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEcCCC--CC---cc---cccc------Cc--------------hhhccCCCHHHHHH
Confidence 9888877653 4689999999983 21 11 0100 00 00012345678899
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++.++..... -.++++.+.++
T Consensus 524 ~v~~L~s~~~~--itG~~~~vdGG 545 (604)
T 2et6_A 524 LLVYLGTDDVP--VTGETFEIGGG 545 (604)
T ss_dssp HHHHTTSTTCC--CCSCEEEEETT
T ss_pred HHHHHhCCccC--CCCcEEEECCC
Confidence 88877653322 35788888765
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.7e-08 Score=109.13 Aligned_cols=165 Identities=16% Similarity=0.181 Sum_probs=106.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC------cccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD------TESAALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+++||||++.||+++++.|.++|.. |++..|... .....+.+.+++ +.. +
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~---Vv~~~~~~~~~~~gr~~~~~~~~~~~i---------~~~-g------- 65 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAK---VVVNDLGGALNGQGGNSKAADVVVDEI---------VKN-G------- 65 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECC-----------CHHHHHHHHH---------HHT-T-------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCE---EEEEeCCccccccccchHHHHHHHHHH---------Hhc-C-------
Confidence 68999999999999999999999999964 456655431 112222222122 111 1
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCc---c----cCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKF---D----ERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f---~----~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
.+. ..|+++..- .+...+.+ +..+|++||+||.... . +.++..+++|+.|+..+.+++.. |
T Consensus 66 -~~~---~~d~~d~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~ 138 (604)
T 2et6_A 66 -GVA---VADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQ 138 (604)
T ss_dssp -CEE---EEECCCTTC---HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred -CeE---EEEcCCHHH---HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 122 246654310 12222222 3479999999997542 1 34778899999999999888754 2
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+||....... .....
T Consensus 139 ~~~~G~IVnisS~ag~~~~--------------------------------------------------------~~~~~ 162 (604)
T 2et6_A 139 KQKYGRIVNTSSPAGLYGN--------------------------------------------------------FGQAN 162 (604)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTBHH
T ss_pred HcCCCEEEEECCHHHcCCC--------------------------------------------------------CCchH
Confidence 133689999986543211 11357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEecc
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPT 257 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPs 257 (570)
|+.||+..+.+.+.. ..++.+..|-|+
T Consensus 163 Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 163 YASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 999999888877654 558999999996
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.86 E-value=5.2e-08 Score=102.01 Aligned_cols=172 Identities=12% Similarity=-0.021 Sum_probs=109.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHH-hCCCccEEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILR-VQPNVKKLYLLIRAADTESA---------ALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~-~g~~V~~i~~lvR~~~~~~~---------~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
.+|++|||||++.||.++++.|.+ .|. +|++..|.+..... .+.+.++ ++ +.
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA---~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~---------~~-~~----- 121 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGA---DTLGVFFEKPGTASKAGTAGWYNSAAFDKH---------AK-AA----- 121 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCCHHHHHHHHHHHH---------HH-HT-----
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCC---EEEEEeCCchhhhhhhcccccchhHHHHHH---------HH-hc-----
Confidence 489999999999999999999999 995 45677776543221 0111101 11 11
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHH-------h-CCccEEEEcCccC----------------Cc----------
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEEL-------W-NELDVMVNSAAIT----------------KF---------- 126 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l-------~-~~vdiVih~Aa~v----------------~f---------- 126 (570)
..++..+.+|+++ ++..+.+ + ..+|++||+||.. .+
T Consensus 122 ---G~~a~~i~~Dvtd-------~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d 191 (422)
T 3s8m_A 122 ---GLYSKSINGDAFS-------DAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAID 191 (422)
T ss_dssp ---TCCEEEEESCTTS-------HHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEE
T ss_pred ---CCcEEEEEecCCC-------HHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccc
Confidence 1467889999995 3222232 3 5689999999862 11
Q ss_pred ---------------ccCHHHHHHHHHHHHH-HHHHHHHHc---cCceEEEEEecccccCCCCCeeccccCCCCCCCChH
Q 008315 127 ---------------DERYDVAFGINTLGAI-HLVNFAKKC---VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFD 187 (570)
Q Consensus 127 ---------------~~~~~~~~~~Nv~gt~-~ll~~a~~~---~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~ 187 (570)
.+.++..+++|..++. .+++.+... .+-.++|.+||........ .
T Consensus 192 ~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p------~---------- 255 (422)
T 3s8m_A 192 TNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP------I---------- 255 (422)
T ss_dssp TTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH------H----------
T ss_pred cccccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC------C----------
Confidence 1234555666666654 555554331 1114789998865321100 0
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 188 AEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
.+...|+.||+..+.+.+.. ..|+.+..+-|+.|-.+
T Consensus 256 --------------------------------------~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 256 --------------------------------------YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp --------------------------------------HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred --------------------------------------ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 12367999999988887654 56899999999998765
Q ss_pred CC
Q 008315 263 YK 264 (570)
Q Consensus 263 ~~ 264 (570)
..
T Consensus 298 ~~ 299 (422)
T 3s8m_A 298 AS 299 (422)
T ss_dssp TG
T ss_pred hh
Confidence 44
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=2.8e-08 Score=125.60 Aligned_cols=170 Identities=16% Similarity=0.140 Sum_probs=117.2
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
|-.+|+++||||+|.||.++++.|.++|. +.|+++.|+.......+...+++ +. . ..++.
T Consensus 1881 ~~~~k~~lITGgs~GIG~aia~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l---------~~-~--------g~~v~ 1940 (2512)
T 2vz8_A 1881 CPPHKSYVITGGLGGFGLQLAQWLRLRGA--QKLVLTSRSGIRTGYQARQVREW---------RR-Q--------GVQVL 1940 (2512)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCSHHHHHHHHHH---------HH-T--------TCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHCCC--CEEEEEeCCCcchHHHHHHHHHH---------Hh-C--------CCEEE
Confidence 44789999999999999999999999986 34677888765443222222111 11 1 24688
Q ss_pred EEEccCCCCCCCCChhhhHHHHh------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-ccCc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-CVKL 154 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (570)
++.+|+++ .+..+.++ ..+|+|||+||.... .+.++..+++|+.|+.++.+++.. ++..
T Consensus 1941 ~~~~Dvsd-------~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~ 2013 (2512)
T 2vz8_A 1941 VSTSNASS-------LDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL 2013 (2512)
T ss_dssp EECCCSSS-------HHHHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC
T ss_pred EEecCCCC-------HHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 89999995 33233333 369999999997532 145677789999999999888765 4456
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.+||.+||........ ....|+.+
T Consensus 2014 g~iV~iSS~ag~~g~~--------------------------------------------------------g~~~Y~aa 2037 (2512)
T 2vz8_A 2014 DYFVIFSSVSCGRGNA--------------------------------------------------------GQANYGFA 2037 (2512)
T ss_dssp CEEEEECCHHHHTTCT--------------------------------------------------------TCHHHHHH
T ss_pred CEEEEecchhhcCCCC--------------------------------------------------------CcHHHHHH
Confidence 7999999976542211 13579999
Q ss_pred HHHHHHHHHHh-cCCCcEEEEecccccc
Q 008315 235 KTMGEMIMQQS-KENLSLVIIRPTIVSG 261 (570)
Q Consensus 235 K~~aE~~v~~~-~~~lp~~IvRPsiV~g 261 (570)
|+..+.+.+.. ..|+|...+-.+.+.+
T Consensus 2038 Kaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2038 NSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp HHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred HHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence 99999999854 6789988888776643
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1e-07 Score=100.35 Aligned_cols=172 Identities=10% Similarity=-0.064 Sum_probs=108.5
Q ss_pred cCCCEEEEECCccHhHHH--HHHHHHHhCCCccEEEEEEecCCcccH---------HHHHHHHHhhhhhHHHHHhhhccc
Q 008315 10 LENKIILVSGVTGFVAKV--FIEKILRVQPNVKKLYLLIRAADTESA---------ALRFQNEVLAKDLFNVLKEKWGTR 78 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~--Lve~Ll~~g~~V~~i~~lvR~~~~~~~---------~~rl~~~l~~~~~f~~l~~~~~~~ 78 (570)
..||++|||||++.||.+ +++.|.+.|. +|+++.|++..... .+.+.+ +.++.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga---~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~----------~~~~~--- 121 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEA---HTIGVSYETGATDRRIGTAGWYNNIFFKE----------FAKKK--- 121 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCC---EEEEEECCCCCCSSCCCCHHHHHHHHHHH----------HHHHT---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCC---EEEEEecCcchhhhcccccccchHHHHHH----------HHHHc---
Confidence 578999999999999999 9999988885 45777886544210 122221 11111
Q ss_pred ccccccCceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccC----------------Cc---------
Q 008315 79 LNSFISEKITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAIT----------------KF--------- 126 (570)
Q Consensus 79 ~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v----------------~f--------- 126 (570)
..++..+.+|+++ .+..+.++ ..+|++||+||.. .+
T Consensus 122 -----g~~~~~~~~Dvtd-------~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~ 189 (418)
T 4eue_A 122 -----GLVAKNFIEDAFS-------NETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTI 189 (418)
T ss_dssp -----TCCEEEEESCTTC-------HHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEE
T ss_pred -----CCcEEEEEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccc
Confidence 2468899999995 33233333 3589999999863 01
Q ss_pred ----------------ccCHHHHHHHHHHHHH-HHHHHHHHcc---CceEEEEEecccccCCCCCeeccccCCCCCCCCh
Q 008315 127 ----------------DERYDVAFGINTLGAI-HLVNFAKKCV---KLKVFVHVSTAYVAGERTGLILENPLDGASGLDF 186 (570)
Q Consensus 127 ----------------~~~~~~~~~~Nv~gt~-~ll~~a~~~~---~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~ 186 (570)
.+.++..+++|..+.. .+++.+.... +-.++|.+||...... .+
T Consensus 190 d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~---------~p------- 253 (418)
T 4eue_A 190 DVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT---------YK------- 253 (418)
T ss_dssp ETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG---------TT-------
T ss_pred cccccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC---------CC-------
Confidence 1234455666655554 4455443321 1246888887643211 00
Q ss_pred HHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----c-CCCcEEEEeccccc
Q 008315 187 DAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----K-ENLSLVIIRPTIVS 260 (570)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~-~~lp~~IvRPsiV~ 260 (570)
..+..+|+.||+..+.+.+.. . .|+.+.++-|+.|-
T Consensus 254 --------------------------------------~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~ 295 (418)
T 4eue_A 254 --------------------------------------IYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV 295 (418)
T ss_dssp --------------------------------------TTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred --------------------------------------ccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence 012378999999988877654 4 58999999999886
Q ss_pred cCC
Q 008315 261 GTY 263 (570)
Q Consensus 261 g~~ 263 (570)
.+.
T Consensus 296 T~~ 298 (418)
T 4eue_A 296 TKA 298 (418)
T ss_dssp CHH
T ss_pred Chh
Confidence 643
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=8.2e-07 Score=90.23 Aligned_cols=123 Identities=11% Similarity=0.018 Sum_probs=77.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||+||+|..++..|+..+. +..+.++.++.... ..+....++.... + +....+.+..+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~~-~~~~~~~dl~~~~---------~-----~~~~~~~i~~~ 64 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPF-MKDLVLIGREHSIN-KLEGLREDIYDAL---------A-----GTRSDANIYVE 64 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTT-CCEEEEEECGGGHH-HHHHHHHHHHHHH---------T-----TSCCCCEEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCC-CCEEEEEcCCCchh-hhHHHHHHHHHhH---------H-----hcCCCeEEEeC
Confidence 4799999999999999999998764 34565555521111 0111000111100 0 00012333332
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+ +++ .+.++++|+|||+||..+- .....+.+..|+.+++++++.+++. + +++|+++|--
T Consensus 65 ~----------d~l-~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SNP 124 (313)
T 1hye_A 65 S----------DEN-LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITNP 124 (313)
T ss_dssp E----------TTC-GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSSS
T ss_pred C----------cch-HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecCc
Confidence 2 111 2556899999999997643 3445667899999999999999998 6 8888888743
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.44 E-value=6.6e-07 Score=91.45 Aligned_cols=119 Identities=15% Similarity=0.093 Sum_probs=78.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|+||||+||+|..++..|+..|. +..|.++.+.+. ..... ++... ....++..+.
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~-~~ev~l~Di~~~----~~~~~-dL~~~----------------~~~~~v~~~~ 65 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPL-VSVLHLYDVVNA----PGVTA-DISHM----------------DTGAVVRGFL 65 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTT-EEEEEEEESSSH----HHHHH-HHHTS----------------CSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEeCCCc----HhHHH-Hhhcc----------------cccceEEEEe
Confidence 47899999999999999999988663 455666655442 11111 11110 0001222221
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
+ ..++ ++.++++|+|||+|+...- .....+....|+.+++++++.+.+. +.+++|+++|--
T Consensus 66 ~----------t~d~-~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SNP 127 (326)
T 1smk_A 66 G----------QQQL-EAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISNP 127 (326)
T ss_dssp S----------HHHH-HHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSS
T ss_pred C----------CCCH-HHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCc
Confidence 1 2343 3677999999999997643 2334556899999999999999987 677888887643
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.44 E-value=6.1e-07 Score=76.59 Aligned_cols=96 Identities=10% Similarity=0.028 Sum_probs=67.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+|+|+ |++|+.+++.|++.| ..+|+++.|+.. ++. .+ . ..++..+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g--~~~v~~~~r~~~------~~~-~~---------~-----------~~~~~~~ 53 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSS--NYSVTVADHDLA------ALA-VL---------N-----------RMGVATK 53 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCS--SEEEEEEESCHH------HHH-HH---------H-----------TTTCEEE
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCC--CceEEEEeCCHH------HHH-HH---------H-----------hCCCcEE
Confidence 3579999999 999999999999987 235678888532 111 01 0 1456788
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.+|+++ .+..+.+++++|+|||+++.. .+..+++.|.+. +++.|..
T Consensus 54 ~~d~~~-------~~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~~-g~~~~~~ 99 (118)
T 3ic5_A 54 QVDAKD-------EAGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKAA-GAHYFDL 99 (118)
T ss_dssp ECCTTC-------HHHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHHT-TCEEECC
T ss_pred EecCCC-------HHHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHHh-CCCEEEe
Confidence 899984 344457788999999999632 135678888876 6665543
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.40 E-value=2.7e-06 Score=85.98 Aligned_cols=120 Identities=12% Similarity=-0.033 Sum_probs=77.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+||||+||+|..++..|+..+. +..+.++.++... ++++... . .+..... ...++.+..+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~-~~el~L~Di~~~~----~~~~~~~--~----dl~~~~~------~~~~~~v~~~ 63 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDI-ADEVVFVDIPDKE----DDTVGQA--A----DTNHGIA------YDSNTRVRQG 63 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-CSEEEEECCGGGH----HHHHHHH--H----HHHHHHT------TTCCCEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CCEEEEEcCCCCh----hhHHHHH--H----HHHHHHh------hCCCcEEEeC
Confidence 4899999999999999999988764 3456565552111 1111000 0 1111100 0123333332
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
| .+.++++|+|||+|+..+- .....+.+..|+.+++++++.+++. +.+++|+++|--
T Consensus 64 ~--------------~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNP 121 (303)
T 1o6z_A 64 G--------------YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNP 121 (303)
T ss_dssp C--------------GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSS
T ss_pred C--------------HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCCh
Confidence 2 1345899999999997643 3445567899999999999999997 678888887543
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.40 E-value=4.7e-07 Score=92.72 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=76.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHH---HHhhhhhHHHHHhhhccccccccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQP----NVKKLYLLIRAADTESAALRFQN---EVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~----~V~~i~~lvR~~~~~~~~~rl~~---~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
.++|+||||+||+|..++..|+..+. .+..|.++.+.... ..+++.. ++.... .
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~--~~~~~~g~~~dl~~~~-----------------~ 65 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEK--AQKALQGVMMEIDDCA-----------------F 65 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHH--HHHHHHHHHHHHHTTT-----------------C
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCcc--ccccchhhHHHHhhhc-----------------c
Confidence 47999999999999999999998663 12356665443100 0111110 111100 0
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCce-EEEEEec
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLK-VFVHVST 162 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-~fV~vST 162 (570)
. . .+|+.. ..+. ...++++|+|||+||..+- .....+.+..|+.+++++++.+.+..+.+ +||++|.
T Consensus 66 ~-~---~~~i~~------~~~~-~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 66 P-L---LAGMTA------HADP-MTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp T-T---EEEEEE------ESSH-HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred c-c---cCcEEE------ecCc-HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 0 0 123331 1232 4677899999999997653 34456778999999999999999872234 7888874
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-05 Score=102.45 Aligned_cols=115 Identities=12% Similarity=0.174 Sum_probs=76.1
Q ss_pred cCCCEEEEECCccH-hHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGF-VAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGF-lG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++||+++||||++. ||+++++.|++.|. +|++..|+..... .+.++ .+.++.+. ...++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA---~Vvi~~r~~~~~~-~~~~~----------~l~~~l~~-----~G~~~~ 2194 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGA---TVIATTSRLDDDR-LAFYK----------QLYRDHAR-----FDATLW 2194 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTC---EEEEEESCCSHHH-HHHHH----------HHHHHHCC-----TTCEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCC---EEEEEeCChhhhh-hHHHH----------HHHHHHhh-----cCCeEE
Confidence 79999999999999 99999999999995 4567777654311 11111 11112110 024678
Q ss_pred EEEccCCCCCCCCChhhhHHHH----hC-------CccEEEEcCcc----CCc------------ccCHHHHHHHHHHHH
Q 008315 89 FVAGDISSEDLGLKDSNLKEEL----WN-------ELDVMVNSAAI----TKF------------DERYDVAFGINTLGA 141 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l----~~-------~vdiVih~Aa~----v~f------------~~~~~~~~~~Nv~gt 141 (570)
.+.+|+++ .+..+.+ .+ .+|++||+||. ..+ +..++..+++|+.++
T Consensus 2195 ~v~~Dvtd-------~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~ 2267 (3089)
T 3zen_D 2195 VVPANMAS-------YSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAV 2267 (3089)
T ss_dssp EEECCTTC-------HHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHH
T ss_pred EEEecCCC-------HHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 89999995 3323333 23 48999999997 211 112344589999999
Q ss_pred HHHHHHHHH
Q 008315 142 IHLVNFAKK 150 (570)
Q Consensus 142 ~~ll~~a~~ 150 (570)
..+++.+..
T Consensus 2268 ~~l~~~~~~ 2276 (3089)
T 3zen_D 2268 QRLISGLSK 2276 (3089)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988887754
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=6.4e-06 Score=82.48 Aligned_cols=83 Identities=17% Similarity=0.143 Sum_probs=58.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|+||||+|++|++++..|++.|. +|++..|+... .+.+.++ +... .++.+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~---~V~i~~R~~~~---~~~l~~~---------~~~~----------~~~~~ 171 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLDK---AQAAADS---------VNKR----------FKVNV 171 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSHHH---HHHHHHH---------HHHH----------HTCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC---EEEEEECCHHH---HHHHHHH---------HHhc----------CCcEE
Confidence 5789999999999999999999999985 36788886321 1112111 1111 13456
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v 124 (570)
+.+|+++ .+..+.+++++|+|||+|+..
T Consensus 172 ~~~D~~~-------~~~~~~~~~~~DvlVn~ag~g 199 (287)
T 1lu9_A 172 TAAETAD-------DASRAEAVKGAHFVFTAGAIG 199 (287)
T ss_dssp EEEECCS-------HHHHHHHTTTCSEEEECCCTT
T ss_pred EEecCCC-------HHHHHHHHHhCCEEEECCCcc
Confidence 7789884 444457788999999999853
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.1e-05 Score=86.06 Aligned_cols=108 Identities=15% Similarity=0.180 Sum_probs=69.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+||| +|++|+++++.|++.|. +|++..|+.. +.+ ++. ++ ..++..+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~---~V~v~~R~~~------~a~-~la---------~~---------~~~~~~~ 52 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGI---KVTVACRTLE------SAK-KLS---------AG---------VQHSTPI 52 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTC---EEEEEESSHH------HHH-HTT---------TT---------CTTEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcC---EEEEEECCHH------HHH-HHH---------Hh---------cCCceEE
Confidence 578999998 89999999999998774 4677787531 111 110 00 1246788
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHH--H-------HHHHHHHHHHHHHccCce
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGI--N-------TLGAIHLVNFAKKCVKLK 155 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~--N-------v~gt~~ll~~a~~~~~lk 155 (570)
.+|+++ .+..+.+++++|+|||+|+.....+-...+++. | ..++.+++++|++. +++
T Consensus 53 ~~Dv~d-------~~~l~~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv~ 118 (450)
T 1ff9_A 53 SLDVND-------DAALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GIT 118 (450)
T ss_dssp ECCTTC-------HHHHHHHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TCE
T ss_pred EeecCC-------HHHHHHHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CCe
Confidence 899984 333457778999999999864221111222332 2 24678899999887 654
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0001 Score=64.82 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=63.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++++|+|+|+ |.+|+.+++.|.+.|.+| +++.|+. ++.. .+ .......
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v---~~~d~~~------~~~~-~~--------------------~~~~~~~ 52 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINE------EKVN-AY--------------------ASYATHA 52 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCH------HHHH-TT--------------------TTTCSEE
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEE---EEEeCCH------HHHH-HH--------------------HHhCCEE
Confidence 35678999998 999999999999988765 4555542 1111 00 0123456
Q ss_pred EEccCCCCCCCCChhhhHHHH-hCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecc
Q 008315 90 VAGDISSEDLGLKDSNLKEEL-WNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa 163 (570)
+.+|.++ .+..+.+ .+++|+||++++.. ...|. .+.+.|++. +.+++|..++.
T Consensus 53 ~~~d~~~-------~~~l~~~~~~~~d~vi~~~~~~---------~~~~~----~~~~~~~~~-~~~~ii~~~~~ 106 (144)
T 2hmt_A 53 VIANATE-------ENELLSLGIRNFEYVIVAIGAN---------IQAST----LTTLLLKEL-DIPNIWVKAQN 106 (144)
T ss_dssp EECCTTC-------HHHHHTTTGGGCSEEEECCCSC---------HHHHH----HHHHHHHHT-TCSEEEEECCS
T ss_pred EEeCCCC-------HHHHHhcCCCCCCEEEECCCCc---------hHHHH----HHHHHHHHc-CCCeEEEEeCC
Confidence 7889873 3333343 57899999998751 12232 355566766 55666655443
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.64 E-value=9.3e-05 Score=71.15 Aligned_cols=78 Identities=19% Similarity=0.254 Sum_probs=53.1
Q ss_pred CCCEEEEECC----------------ccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhh
Q 008315 11 ENKIILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74 (570)
Q Consensus 11 ~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~ 74 (570)
+||+|||||| ||.+|.++++.+++.|.+| .++.|+..-..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V---~lv~~~~~~~~--------------------- 57 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEV---CLITTKRALKP--------------------- 57 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEE---EEEECTTSCCC---------------------
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEE---EEEeCCccccc---------------------
Confidence 5899999999 9999999999999999754 67777643210
Q ss_pred hcccccccccCceEEEEccCCCCCCCCChhhhHH---HHhCCccEEEEcCccCCcc
Q 008315 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKE---ELWNELDVMVNSAAITKFD 127 (570)
Q Consensus 75 ~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~---~l~~~vdiVih~Aa~v~f~ 127 (570)
.....+..+..+- ..+..+ ..+.++|++||+||...|.
T Consensus 58 -------~~~~~~~~~~v~s--------~~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 58 -------EPHPNLSIREITN--------TKDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp -------CCCTTEEEEECCS--------HHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred -------cCCCCeEEEEHhH--------HHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 0012455554431 333332 3345799999999987775
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00027 Score=72.11 Aligned_cols=119 Identities=18% Similarity=0.063 Sum_probs=71.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccE-----EEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKK-----LYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~-----i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++|.||||+|++|..++..|+..+. +.. +.++.+.+.......... ++.... ..-
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~-~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~-----------------~~~ 63 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSV-FGKDQPIILVLLDITPMMGVLDGVLM-ELQDCA-----------------LPL 63 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTC-----------------CTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCC-ccccCCCEEEEEeCCCccccchhhHh-hhHhhh-----------------hcc
Confidence 36899999999999999999987542 223 666666432111111111 121100 011
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCce--EEEEEe
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLK--VFVHVS 161 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk--~fV~vS 161 (570)
+..+.+ . ..+ ...++++|+|||+||..+- .+...+.++.|+..++++++.+.+. +.+ .++.+|
T Consensus 64 ~~~~~~--~-------~~~--~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~vivvs 129 (333)
T 5mdh_A 64 LKDVIA--T-------DKE--EIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIVVG 129 (333)
T ss_dssp EEEEEE--E-------SCH--HHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEECS
T ss_pred cCCEEE--c-------CCc--HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEcC
Confidence 111111 1 111 2566899999999997542 3344566899999999999999987 443 355554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00044 Score=70.02 Aligned_cols=114 Identities=15% Similarity=0.106 Sum_probs=72.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|++|..++..|+..+. +..|.++.+.+ . +....++.... ...++....+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~-~~ev~L~Di~~----~-~~~a~dL~~~~----------------~~~~l~~~~~ 58 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPL-VSRLTLYDIAH----T-PGVAADLSHIE----------------TRATVKGYLG 58 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTT-CSEEEEEESSS----H-HHHHHHHTTSS----------------SSCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-CcEEEEEeCCc----c-HHHHHHHhccC----------------cCceEEEecC
Confidence 4799999999999999999887653 56778888865 1 11111221100 0112332211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCce-EEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLK-VFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk-~fV~v 160 (570)
..+. +..++++|+||++|+..+- .+...+.+..|+..++.+++.+.+. ... .++.+
T Consensus 59 ----------t~d~-~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 116 (314)
T 1mld_A 59 ----------PEQL-PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII 116 (314)
T ss_dssp ----------GGGH-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred ----------CCCH-HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEE
Confidence 1233 3567999999999997642 3333456899999999999988875 233 44444
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0009 Score=58.32 Aligned_cols=96 Identities=14% Similarity=0.196 Sum_probs=59.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++|+|+|+ |++|+.+++.|.+.|.+ |.++.|+.. ..+++. ++ ..+..+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~---v~~~d~~~~---~~~~~~-------------~~----------~~~~~~~ 53 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHD---IVLIDIDKD---ICKKAS-------------AE----------IDALVIN 53 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHH-------------HH----------CSSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCe---EEEEECCHH---HHHHHH-------------Hh----------cCcEEEE
Confidence 579999996 99999999999998854 566666421 111111 11 1456788
Q ss_pred ccCCCCCCCCChhhhHHHH-hCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 92 GDISSEDLGLKDSNLKEEL-WNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
+|.++ .+..... .+++|+||++.... ..|. .+.++++.. +..++|.
T Consensus 54 ~d~~~-------~~~l~~~~~~~~d~vi~~~~~~----------~~~~----~~~~~~~~~-~~~~ii~ 100 (140)
T 1lss_A 54 GDCTK-------IKTLEDAGIEDADMYIAVTGKE----------EVNL----MSSLLAKSY-GINKTIA 100 (140)
T ss_dssp SCTTS-------HHHHHHTTTTTCSEEEECCSCH----------HHHH----HHHHHHHHT-TCCCEEE
T ss_pred cCCCC-------HHHHHHcCcccCCEEEEeeCCc----------hHHH----HHHHHHHHc-CCCEEEE
Confidence 88873 3323222 57899999997531 2222 455566666 4556654
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00044 Score=66.25 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=31.3
Q ss_pred cCCCEEEEECC----------------ccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGV----------------TGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++||+|||||| ||.+|.++++.|.+.|.+| .++.|+.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V---~l~~~~~ 58 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV---TLVSGPV 58 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE---EEEECSC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEE---EEEECCc
Confidence 58999999999 7999999999999999755 4555643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0056 Score=63.04 Aligned_cols=96 Identities=15% Similarity=0.044 Sum_probs=57.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHH-HhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKIL-RVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll-~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
..+|+||||||+..+|.+....|. +.|. .+.++.|.+........- ....+...|...-++.+ .+..
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA---~vi~v~~~~~~~~~~~at-ag~~~~~a~~~~i~~~G--------~~a~ 115 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGA---ATIGVSFEKAGSETKYGT-PGWYNNLAFDEAAKREG--------LYSV 115 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCC---EEEEEECCCCCCSSSCCC-HHHHHHHHHHHHHHHHT--------CCEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCC---CEEEEecCCccccccccc-ccchhHHHHHHHHHHcC--------CCce
Confidence 357999999999999999998887 6674 445666654332100000 00001111222222222 5678
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC-------CccEEEEcCccC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN-------ELDVMVNSAAIT 124 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~-------~vdiVih~Aa~v 124 (570)
.+.+|+++ ++..+.+++ ++|+++|++|..
T Consensus 116 ~i~~Dv~d-------~e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 116 TIDGDAFS-------DEIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp EEESCTTS-------HHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred eEeCCCCC-------HHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 89999995 333344443 699999999965
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00032 Score=74.91 Aligned_cols=83 Identities=17% Similarity=0.229 Sum_probs=54.1
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
|..-+++++|+|+|| |++|+++++.|++.+ . .+|++..|+.. +.+ ++.+ . .
T Consensus 17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~-g-~~V~v~~R~~~------ka~-~la~---------~----------~ 67 (467)
T 2axq_A 17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAAND-D-INVTVACRTLA------NAQ-ALAK---------P----------S 67 (467)
T ss_dssp ------CEEEEEECC-STTHHHHHHHHHTST-T-EEEEEEESSHH------HHH-HHHG---------G----------G
T ss_pred cccCCCCCEEEEECC-hHHHHHHHHHHHhCC-C-CeEEEEECCHH------HHH-HHHH---------h----------c
Confidence 455567899999997 999999999999873 2 35788888632 111 1110 0 1
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccC
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v 124 (570)
++..+.+|+.+ .+....+++++|+|||+++..
T Consensus 68 ~~~~~~~D~~d-------~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 68 GSKAISLDVTD-------DSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp TCEEEECCTTC-------HHHHHHHHHTSSEEEECSCGG
T ss_pred CCcEEEEecCC-------HHHHHHHHcCCCEEEECCchh
Confidence 35667888873 333446778999999999864
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0024 Score=57.09 Aligned_cols=79 Identities=11% Similarity=0.203 Sum_probs=53.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|+|+|+ |.+|+.+++.|.+.|.+| .++.|.... ..+++. +.. ..++.++
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V---~vid~~~~~--~~~~~~-------------~~~--------~~~~~~i 54 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNV---TVISNLPED--DIKQLE-------------QRL--------GDNADVI 54 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCCHH--HHHHHH-------------HHH--------CTTCEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCE---EEEECCChH--HHHHHH-------------Hhh--------cCCCeEE
Confidence 5678999995 999999999999988665 566664211 111111 111 2457899
Q ss_pred EccCCCCCCCCChhhhHHHH-hCCccEEEEcCcc
Q 008315 91 AGDISSEDLGLKDSNLKEEL-WNELDVMVNSAAI 123 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa~ 123 (570)
.||.++ .+.++.+ ++++|.||-+.+.
T Consensus 55 ~gd~~~-------~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 55 PGDSND-------SSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp ESCTTS-------HHHHHHHTTTTCSEEEECSSC
T ss_pred EcCCCC-------HHHHHHcChhhCCEEEEecCC
Confidence 999984 4444454 7899999987654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0012 Score=58.11 Aligned_cols=74 Identities=9% Similarity=0.125 Sum_probs=51.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|+|+|+ |++|+.+++.|.+.|.+| .++.|++. ..+++. ...+.++
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V---~~id~~~~---~~~~~~------------------------~~~~~~~ 53 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKV---LAVDKSKE---KIELLE------------------------DEGFDAV 53 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCE---EEEESCHH---HHHHHH------------------------HTTCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeE---EEEECCHH---HHHHHH------------------------HCCCcEE
Confidence 4678999997 999999999999999765 56666421 111111 1346789
Q ss_pred EccCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 91 AGDISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
.||.++ ++.++.+ .+++|+||.+.+
T Consensus 54 ~gd~~~-------~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 54 IADPTD-------ESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp ECCTTC-------HHHHHHSCCTTCSEEEECCS
T ss_pred ECCCCC-------HHHHHhCCcccCCEEEEecC
Confidence 999994 4434333 467999998776
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00046 Score=72.42 Aligned_cols=82 Identities=23% Similarity=0.193 Sum_probs=55.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCc-cEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNV-KKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V-~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
++|+|+|| |++|+.+++.|++.+ ++ ..|.+..|+.... +++.+++ .... ..++..+.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g-~~~~~V~v~~r~~~~~---~~la~~l---------~~~~--------~~~~~~~~ 59 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNR-EVFSHITLASRTLSKC---QEIAQSI---------KAKG--------YGEIDITT 59 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCT-TTCCEEEEEESCHHHH---HHHHHHH---------HHTT--------CCCCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CCceEEEEEECCHHHH---HHHHHHh---------hhhc--------CCceEEEE
Confidence 58999998 999999999999865 33 4677888864321 2222111 1100 13578899
Q ss_pred ccCCCCCCCCChhhhHHHHhCC--ccEEEEcCcc
Q 008315 92 GDISSEDLGLKDSNLKEELWNE--LDVMVNSAAI 123 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~ 123 (570)
+|+++ .+..+.++++ +|+|||+|+.
T Consensus 60 ~D~~d-------~~~l~~~l~~~~~DvVin~ag~ 86 (405)
T 4ina_A 60 VDADS-------IEELVALINEVKPQIVLNIALP 86 (405)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECSCG
T ss_pred ecCCC-------HHHHHHHHHhhCCCEEEECCCc
Confidence 99984 3334577776 8999999985
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00032 Score=71.72 Aligned_cols=112 Identities=16% Similarity=0.161 Sum_probs=69.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
-+|+++++|.|+||+|++|..++..|+..|. ...|.++.+.+... +....++.... | + ..+
T Consensus 3 ~~~~~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~~~k~---~g~a~DL~~~~-~-------~-------~~~ 63 (343)
T 3fi9_A 3 LSYLTEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPFAVGL---EGVAEEIRHCG-F-------E-------GLN 63 (343)
T ss_dssp CCCSCSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSCHHHH---HHHHHHHHHHC-C-------T-------TCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCCchhH---HHHHHhhhhCc-C-------C-------CCc
Confidence 3789999999999999999999999998874 23456665532111 11110121110 0 0 112
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.+ . .+. ...++++|+||.+||..+- .+.-.+.+..|+...+.+.+.+.+.
T Consensus 64 i~~-t------------~d~-~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~ 115 (343)
T 3fi9_A 64 LTF-T------------SDI-KEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSY 115 (343)
T ss_dssp CEE-E------------SCH-HHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEE-c------------CCH-HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 1 122 2556899999999997532 3445567899999999999998876
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0017 Score=67.03 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=58.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|+|.|| |++|+.+++.|.+ .++ |.+..|+.. +++ .+ .+.+..+.
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~-~~~---v~~~~~~~~------~~~-~~---------------------~~~~~~~~ 62 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKD-EFD---VYIGDVNNE------NLE-KV---------------------KEFATPLK 62 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT-TSE---EEEEESCHH------HHH-HH---------------------TTTSEEEE
T ss_pred ccEEEEECC-CHHHHHHHHHHhc-CCC---eEEEEcCHH------HHH-HH---------------------hccCCcEE
Confidence 368999998 9999999988865 444 456556431 111 00 24567788
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.|+. +.+.+..+++++|+||+++... + . ..++++|.+.
T Consensus 63 ~d~~-------d~~~l~~~~~~~DvVi~~~p~~-~----~----------~~v~~~~~~~ 100 (365)
T 3abi_A 63 VDAS-------NFDKLVEVMKEFELVIGALPGF-L----G----------FKSIKAAIKS 100 (365)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCCGG-G----H----------HHHHHHHHHH
T ss_pred EecC-------CHHHHHHHHhCCCEEEEecCCc-c----c----------chHHHHHHhc
Confidence 8988 4555568889999999998752 1 1 2477888887
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.01 Score=52.94 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=52.1
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccc-c
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFI-S 84 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~-~ 84 (570)
+++...+++|+|.|+ |.+|..+++.|.+.|. .|.++.|+...... .. .
T Consensus 13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~---~V~vid~~~~~~~~---------------------------~~~~ 61 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGH---SVVVVDKNEYAFHR---------------------------LNSE 61 (155)
T ss_dssp ----CCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGGGGGG---------------------------SCTT
T ss_pred hhcccCCCcEEEECC-CHHHHHHHHHHHhCCC---eEEEEECCHHHHHH---------------------------HHhc
Confidence 455667899999995 9999999999999885 45677775432110 00 1
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHH-hCCccEEEEcCcc
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEEL-WNELDVMVNSAAI 123 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa~ 123 (570)
..+..+.+|..+ .+.+... .+++|+||.+.+.
T Consensus 62 ~g~~~~~~d~~~-------~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 62 FSGFTVVGDAAE-------FETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp CCSEEEESCTTS-------HHHHHTTTGGGCSEEEECSSC
T ss_pred CCCcEEEecCCC-------HHHHHHcCcccCCEEEEEeCC
Confidence 245677788773 3333333 5679999998764
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.005 Score=60.87 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=21.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV 35 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~ 35 (570)
+.++|.|+|+||.+|+.+++.+++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~ 28 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALAL 28 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhC
Confidence 3468999999999999999998753
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.012 Score=53.99 Aligned_cols=75 Identities=13% Similarity=0.185 Sum_probs=51.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+++|+|.| .|.+|..+++.|.+. |.+| .++.|++.. .+.+. ...+..
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V---~vid~~~~~---~~~~~------------------------~~g~~~ 86 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYGKIS---LGIEIREEA---AQQHR------------------------SEGRNV 86 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHCSCE---EEEESCHHH---HHHHH------------------------HTTCCE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccCCeE---EEEECCHHH---HHHHH------------------------HCCCCE
Confidence 467899999 599999999999998 8754 566664311 11111 134567
Q ss_pred EEccCCCCCCCCChhhhHHHH--hCCccEEEEcCcc
Q 008315 90 VAGDISSEDLGLKDSNLKEEL--WNELDVMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l--~~~vdiVih~Aa~ 123 (570)
+.||.+ +.+.+..+ .+++|+||.+.+.
T Consensus 87 ~~gd~~-------~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 87 ISGDAT-------DPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp EECCTT-------CHHHHHTBCSCCCCCEEEECCSS
T ss_pred EEcCCC-------CHHHHHhccCCCCCCEEEEeCCC
Confidence 889988 34444455 6789999987653
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.017 Score=58.21 Aligned_cols=85 Identities=18% Similarity=0.151 Sum_probs=53.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++|++++|+|| |.+|++++..|.+.|. ++|++..|+++.....+.+.+++ ....+ ..+..
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga--~~V~i~nR~~~~~~~a~~la~~~---------~~~~~--------~~~~~ 211 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGV--KEISIFNRKDDFYANAEKTVEKI---------NSKTD--------CKAQL 211 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTTHHHHHHHHHHH---------HHHSS--------CEEEE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCC--CEEEEEECCCchHHHHHHHHHHh---------hhhcC--------CceEE
Confidence 47899999997 8999999999999874 57889999854333333333221 11111 12333
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCcc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~ 123 (570)
.++. +.+.+...+.++|+||++...
T Consensus 212 --~~~~-------~~~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 212 --FDIE-------DHEQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp --EETT-------CHHHHHHHHHTCSEEEECSST
T ss_pred --eccc-------hHHHHHhhhcCCCEEEECccC
Confidence 3444 222234566789999998764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.004 Score=58.00 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=30.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|++|+||||+|.+|..+++.+...|. +|++..|+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~ 72 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGS 72 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESS
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCC---EEEEEeCC
Confidence 579999999999999999999998885 56777775
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.067 Score=53.73 Aligned_cols=107 Identities=18% Similarity=0.138 Sum_probs=69.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|..++..|....+-+..+.++.+.+ ... .+.+ ++... + ...++..+.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~-G~a~--Dl~~~----------~------~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP-GVAV--DLSHI----------P------TAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH-HHHH--HHHTS----------C------SSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch-hHHH--HhhCC----------C------CCceEEEecC
Confidence 5799999999999999988877523446777877765 211 1111 12110 0 0112332222
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+ .+ ...++++|+||-+||..+ ..+.-.+.++.|+.-.+.+.+.+.+.
T Consensus 61 --~--------~~--~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~ 108 (312)
T 3hhp_A 61 --E--------DA--TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT 108 (312)
T ss_dssp --S--------CC--HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --C--------Cc--HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 245689999999999764 33456677999999999999988775
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.043 Score=55.47 Aligned_cols=107 Identities=10% Similarity=0.021 Sum_probs=58.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++++|.|+|| |.+|..++..|+..+. +..+.++.+.+... +-...++.... + + ...+.+.
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~---~g~a~DL~~~~---------~-----~-~~~~~i~ 67 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDKT---KGDAIDLEDAL---------P-----F-TSPKKIY 67 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHTTG---------G-----G-SCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHHH---HHHHhhHhhhh---------h-----h-cCCcEEE
Confidence 5789999996 9999999999998764 35677776642211 11111221111 0 1 1234444
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+| . ..++++|+||.+||..+- .+...+.++.|+.-.+.+.+.+.+.
T Consensus 68 ~~~---------~-----~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 115 (326)
T 3vku_A 68 SAE---------Y-----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp ECC---------G-----GGGTTCSEEEECCCCC----------------CHHHHHHHHHTT
T ss_pred ECc---------H-----HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 332 1 345899999999997532 2334456888999999999988775
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.018 Score=57.75 Aligned_cols=38 Identities=29% Similarity=0.322 Sum_probs=31.3
Q ss_pred cCCCE-EEEE-CCc-----------------cHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 10 LENKI-ILVS-GVT-----------------GFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 10 ~~~k~-VlIT-GaT-----------------GFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
++|++ |||| ||| |-+|.++++.++++|+.| .++.|+..
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V---~lv~g~~s 90 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGV---LFLYRARS 90 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEE---EEEEETTS
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEE---EEEecCCC
Confidence 47888 9999 677 999999999999999765 56677544
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.071 Score=51.71 Aligned_cols=125 Identities=20% Similarity=0.118 Sum_probs=70.4
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHH--hh-hhhHHHHHhhhccccc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEV--LA-KDLFNVLKEKWGTRLN 80 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l--~~-~~~f~~l~~~~~~~~~ 80 (570)
+-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++.+..-..+-..|-. +++ .+ ..+-+++++..|
T Consensus 27 ~~l~~~~VlVvG~-Gg~G~~va~~La~~G--v~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np---- 99 (249)
T 1jw9_B 27 EALKDSRVLIVGL-GGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP---- 99 (249)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT----
T ss_pred HHHhCCeEEEEee-CHHHHHHHHHHHHcC--CCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC----
Confidence 3457899999995 789999999999987 467888877652211110000 000 00 001122333222
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
.-++..+..+++ +++. +.+++++|+||.+... .+. -..+.++|++. + ..+|+.
T Consensus 100 ---~~~v~~~~~~~~-------~~~~-~~~~~~~DvVi~~~d~------~~~--------~~~l~~~~~~~-~-~p~i~~ 152 (249)
T 1jw9_B 100 ---HIAITPVNALLD-------DAEL-AALIAEHDLVLDCTDN------VAV--------RNQLNAGCFAA-K-VPLVSG 152 (249)
T ss_dssp ---TSEEEEECSCCC-------HHHH-HHHHHTSSEEEECCSS------HHH--------HHHHHHHHHHH-T-CCEEEE
T ss_pred ---CcEEEEEeccCC-------HhHH-HHHHhCCCEEEEeCCC------HHH--------HHHHHHHHHHc-C-CCEEEe
Confidence 135667777766 4443 4677899999988643 111 12345566665 4 456776
Q ss_pred eccccc
Q 008315 161 STAYVA 166 (570)
Q Consensus 161 STa~v~ 166 (570)
++....
T Consensus 153 ~~~g~~ 158 (249)
T 1jw9_B 153 AAIRME 158 (249)
T ss_dssp EEEBTE
T ss_pred eeccce
Confidence 554433
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.012 Score=60.06 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=27.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
++|+|.||||.+|+.|++.|+++++.+..+.++.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 5799999999999999999987665444555554
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.016 Score=58.51 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=31.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++||||||+|.+|..+++.+...|. +|++..|+.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~V~~~~~~~ 175 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTA 175 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 579999999999999999999998885 567877753
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.62 E-value=0.018 Score=54.48 Aligned_cols=73 Identities=18% Similarity=0.211 Sum_probs=49.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|+|+ |.+|+.+++.|.+.|.+| .++.|++.. .+++. + ..++.++.|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v---~vid~~~~~---~~~l~-------------~----------~~~~~~i~g 50 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGV---VIINKDREL---CEEFA-------------K----------KLKATIIHG 50 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCE---EEEESCHHH---HHHHH-------------H----------HSSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeE---EEEECCHHH---HHHHH-------------H----------HcCCeEEEc
Confidence 47999996 999999999999998765 455554211 11111 1 124678999
Q ss_pred cCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 93 DISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
|.++ .+.++.+ ++++|+||-+.+
T Consensus 51 d~~~-------~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 51 DGSH-------KEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CTTS-------HHHHHHHTCCTTCEEEECCS
T ss_pred CCCC-------HHHHHhcCcccCCEEEEecC
Confidence 9994 4444444 678999996654
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.05 Score=54.62 Aligned_cols=45 Identities=20% Similarity=0.175 Sum_probs=35.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR 57 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r 57 (570)
.++++++|+|| |.+|++++..|.+.|. ++|++..|+++.....+.
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~--~~v~v~nRt~~~~~~a~~ 190 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGI--KEIKLFNRKDDFFEKAVA 190 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEECSSTHHHHHHH
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCC--CEEEEEECCCchHHHHHH
Confidence 46899999996 8899999999999764 678899998554333333
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.03 Score=57.06 Aligned_cols=37 Identities=8% Similarity=0.114 Sum_probs=31.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.|++|||+||+|-+|..+++.+...|. +|++..|+..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~V~~~~~~~~ 205 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGY---RVLGIDGGEG 205 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECSTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---cEEEEcCCHH
Confidence 579999999999999999999888884 5678887654
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.013 Score=59.45 Aligned_cols=35 Identities=20% Similarity=0.076 Sum_probs=30.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|++|+||||+|.+|..+++.+...|. +|++..|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~---~V~~~~~~ 179 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGS 179 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCC---EEEEEeCC
Confidence 579999999999999999999998885 56777775
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.17 Score=51.02 Aligned_cols=108 Identities=12% Similarity=0.072 Sum_probs=68.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|+|+ |.+|..++..|+..+. +..|.++.+..... +....++... .| +....+...
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~-~~~l~l~D~~~~k~---~g~a~DL~~~---------~~-----~~~~~v~i~ 64 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGI-TDELVVIDVNKEKA---MGDVMDLNHG---------KA-----FAPQPVKTS 64 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHHT---------GG-----GSSSCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEecchHHH---HHHHHHHHhc---------cc-----cccCCeEEE
Confidence 3579999996 9999999999998774 35677776642211 1111012111 11 111234443
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+| . ..++++|+||.+||..+- .+.-.+.+..|+...+.+.+.+.+.
T Consensus 65 ~~~------------~--~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~ 112 (326)
T 3pqe_A 65 YGT------------Y--EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS 112 (326)
T ss_dssp EEC------------G--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCc------------H--HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 1 345799999999997543 3445567899999999999988875
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.017 Score=58.42 Aligned_cols=36 Identities=6% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|+||||+|.+|..+++.+...|. +|++..|+.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~---~Vi~~~~~~ 180 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGA---TVIGTVSTE 180 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 579999999999999999999998884 567888763
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.23 Score=49.87 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=65.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|+|| |.+|..++..|+..+. +..+.++.+.+....... .++.....| ....+.+...
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~-~~el~l~D~~~~k~~g~a---~DL~~~~~~--------------~~~~~~v~~~ 61 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDV-AKEVVMVDIKDGMPQGKA---LDMRESSPI--------------HGFDTRVTGT 61 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-SSEEEEECSSTTHHHHHH---HHHHHHHHH--------------HTCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCchHHHHHHH---HHHhccccc--------------cCCCcEEEEC
Confidence 57999996 9999999999998774 467788877664322111 122221111 0112233211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
|.. ..++++|+||-+|+..+- .....+.+..|+.-.+.+.+.+.+.
T Consensus 62 ~~~-------------~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~ 108 (314)
T 3nep_X 62 NDY-------------GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG 108 (314)
T ss_dssp SSS-------------GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCH-------------HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh
Confidence 211 345899999999997532 2334566899999999999988875
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.25 E-value=0.16 Score=51.14 Aligned_cols=116 Identities=16% Similarity=0.112 Sum_probs=69.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++-.|+..+. +..|.++.+.+....... . ++.... .+ ...+.+..
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~-~~ev~L~Di~~~~~~g~~--~-dl~~~~--------------~~-~~~~~i~~ 66 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQT-ANELVLIDVFKEKAIGEA--M-DINHGL--------------PF-MGQMSLYA 66 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTC-SSEEEEECCC---CCHHH--H-HHTTSC--------------CC-TTCEEEC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChHHHHHHH--H-HHHHhH--------------Hh-cCCeEEEE
Confidence 468999998 9999999999988764 567888877654333211 0 111100 00 12232221
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
+ +. ..++++|+||.+|+... ......+....|+...+.+.+.+.+. .....|.+.|
T Consensus 67 ~------------~~--~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (318)
T 1y6j_A 67 G------------DY--SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 123 (318)
T ss_dssp -------------CG--GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred C------------CH--HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 1 11 34589999999998753 23344566789999999999988875 3444555443
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.013 Score=60.01 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=28.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCC----CccEEEEEEec
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQP----NVKKLYLLIRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~----~V~~i~~lvR~ 48 (570)
|+.++|+|.||||.+|+.|++.|+++++ .+ .+.++.+.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~-ei~~l~s~ 48 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRL-RIGALTAA 48 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSE-EEEEEEES
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccE-EEEEEECC
Confidence 3446999999999999999999987531 44 45566543
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.093 Score=50.94 Aligned_cols=127 Identities=13% Similarity=0.066 Sum_probs=70.6
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh---hhhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVL---AKDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++.+..-..+-..|-. +++- ...+-+++++..|
T Consensus 23 q~~l~~~~VlvvG~-GglG~~va~~La~~G--vg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 96 (251)
T 1zud_1 23 QQKLLDSQVLIIGL-GGLGTPAALYLAGAG--VGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP--- 96 (251)
T ss_dssp HHHHHTCEEEEECC-STTHHHHHHHHHHTT--CSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhcCcEEEEcc-CHHHHHHHHHHHHcC--CCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC---
Confidence 34567899999997 559999999999987 577877755431111000000 0000 0011223333333
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++.+..+++ +++. ..+++++|+||.+... ... -..+-++|.+. + +.+|+
T Consensus 97 ----~~~v~~~~~~~~-------~~~~-~~~~~~~DvVi~~~d~------~~~--------r~~l~~~~~~~-~-~p~i~ 148 (251)
T 1zud_1 97 ----DIQLTALQQRLT-------GEAL-KDAVARADVVLDCTDN------MAT--------RQEINAACVAL-N-TPLIT 148 (251)
T ss_dssp ----TSEEEEECSCCC-------HHHH-HHHHHHCSEEEECCSS------HHH--------HHHHHHHHHHT-T-CCEEE
T ss_pred ----CCEEEEEeccCC-------HHHH-HHHHhcCCEEEECCCC------HHH--------HHHHHHHHHHh-C-CCEEE
Confidence 235666666665 4443 4677889999988543 111 12344556654 3 45788
Q ss_pred EecccccC
Q 008315 160 VSTAYVAG 167 (570)
Q Consensus 160 vSTa~v~~ 167 (570)
.++....|
T Consensus 149 ~~~~g~~G 156 (251)
T 1zud_1 149 ASAVGFGG 156 (251)
T ss_dssp EEEEBTEE
T ss_pred Eeccccce
Confidence 77655443
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=95.15 E-value=0.043 Score=47.96 Aligned_cols=73 Identities=12% Similarity=0.159 Sum_probs=49.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|+|.|+ |.+|..+++.|.+.|.+| .++.|++.. .+++. ..++.++.|
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v---~vid~~~~~---~~~~~------------------------~~g~~~i~g 56 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPL---VVIETSRTR---VDELR------------------------ERGVRAVLG 56 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCE---EEEESCHHH---HHHHH------------------------HTTCEEEES
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCE---EEEECCHHH---HHHHH------------------------HcCCCEEEC
Confidence 57999995 999999999999998764 566664321 11111 145778999
Q ss_pred cCCCCCCCCChhhhHHHH-hCCccEEEEcCcc
Q 008315 93 DISSEDLGLKDSNLKEEL-WNELDVMVNSAAI 123 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiVih~Aa~ 123 (570)
|.++ ++.++.+ .+++|+||-+...
T Consensus 57 d~~~-------~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 57 NAAN-------EEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CTTS-------HHHHHHTTGGGCSEEEECCSC
T ss_pred CCCC-------HHHHHhcCcccCCEEEEECCC
Confidence 9994 4444333 5679999876554
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=95.12 E-value=0.019 Score=58.80 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=30.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|+||||+|.+|..+++.+...|. +|++..|+.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga---~Vi~~~~~~ 205 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 205 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCC---EEEEEeCCh
Confidence 579999999999999999999988884 567888764
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.047 Score=55.76 Aligned_cols=36 Identities=8% Similarity=-0.027 Sum_probs=30.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|+||||+|-+|..++..+...|. +|++..|+.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga---~Vi~~~~~~ 197 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGA---IPLVTAGSQ 197 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 579999999999999999999988884 567888753
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.48 Score=47.65 Aligned_cols=109 Identities=16% Similarity=0.104 Sum_probs=68.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+.++|.|+| +|.+|..++..|+..+. . .|+++.+.+...... ..++.....+ ......+
T Consensus 3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~-~-~v~l~Di~~~~~~g~---a~dL~~~~~~--------------~~~~~~v 62 (321)
T 3p7m_A 3 MARKKITLVG-AGNIGGTLAHLALIKQL-G-DVVLFDIAQGMPNGK---ALDLLQTCPI--------------EGVDFKV 62 (321)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHTTC-C-EEEEECSSSSHHHHH---HHHHHTTHHH--------------HTCCCCE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC-c-eEEEEeCChHHHHHH---HHHHHhhhhh--------------cCCCcEE
Confidence 4568999999 59999999999988765 2 677777765432111 1122211100 0011222
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
...+ +. +.++++|+||.+|+..+- .....+.+..|+...+.+.+.+.+.
T Consensus 63 ~~t~-----------d~--~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 112 (321)
T 3p7m_A 63 RGTN-----------DY--KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHN 112 (321)
T ss_dssp EEES-----------CG--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcC-----------CH--HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 2111 11 355899999999987532 3445667889999999999988776
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.63 Score=47.24 Aligned_cols=112 Identities=12% Similarity=0.062 Sum_probs=68.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCcc-----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVK-----KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~-----~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
++.-+|.||||+|.||..|+-.|.. ++-+. .+.++...+... ..+-+.-++.... + .
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~-~~l~~~~~~~eL~L~Di~~~~~-~~~Gva~DL~~~~------------~----~ 83 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIAR-GALLGPTTPVELRLLDIEPALK-ALAGVEAELEDCA------------F----P 83 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHH-TTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHHTT------------C----T
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHh-ccccCCCCccEEEEECCCCccc-cchhhhhhhhhcC------------c----c
Confidence 4556999999999999999876654 43322 455655543211 1111111121111 0 0
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.....+.++ .+ ...++++|+||-+||..+ ......+.++.|..-.+.+.+...+.
T Consensus 84 ~~~~~~~~~----------~~--~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~ 139 (345)
T 4h7p_A 84 LLDKVVVTA----------DP--RVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAV 139 (345)
T ss_dssp TEEEEEEES----------CH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEcC----------Ch--HHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhh
Confidence 112222221 11 256799999999999764 34566778999999999999988764
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.43 Score=47.34 Aligned_cols=115 Identities=14% Similarity=0.022 Sum_probs=71.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|-|+|| |.+|+.++-.|+.++ -+..+.++...+..... ... +|..... +.......+.+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~-~~~el~L~Di~~~~~~G--~a~-DL~h~~~--------------~~~~~~~i~~~ 61 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVG--EAM-DLAHAAA--------------GIDKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHH--HHH-HHHHHHG--------------GGTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCCEEEEEeCCCCcchh--hhh-hhhcccc--------------cCCCCCeEecC
Confidence 57999995 999999999888765 45777777664321111 111 2221110 01112222222
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
+ ++ +.++++|+|+-+||..+- ...-.+.++.|..-.+.+.+.+.+. ..+.++.+
T Consensus 62 ~-----------d~--~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlv 116 (294)
T 2x0j_A 62 A-----------DY--SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILV 116 (294)
T ss_dssp S-----------CG--GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEE
T ss_pred C-----------CH--HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEE
Confidence 1 11 234799999999997653 4566778999999999999988876 33444433
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=94.49 E-value=0.026 Score=57.72 Aligned_cols=36 Identities=17% Similarity=0.093 Sum_probs=30.5
Q ss_pred CC--CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 EN--KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~--k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.| ++||||||+|.+|..+++.+...|. ++|++..|+
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga--~~Vi~~~~~ 195 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGC--SRVVGICGT 195 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTC--SEEEEEESC
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCC--CeEEEEeCC
Confidence 57 9999999999999999999888874 266787775
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=0.33 Score=49.80 Aligned_cols=111 Identities=13% Similarity=0.060 Sum_probs=65.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccE---EEE--EEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKK---LYL--LIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~---i~~--lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
+..+|.||||+|.+|..++-.|+..+ -+.. |.+ +...+.......... +|.... .| +..
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~-l~~e~~~l~L~d~d~~~~~~~~~G~am-DL~h~~--------~p------~~~ 94 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGE-VFGQDQPIALKLLGSERSFQALEGVAM-ELEDSL--------YP------LLR 94 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTT--------CT------TEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCC-cCCCCceeEEEecCccchhhhhHHHHH-hHHhhh--------hh------hcC
Confidence 45789999999999999999888754 2222 333 222221111111100 221111 00 012
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++.+ . ..+ ...++++|+||-+||..+ -.+...+.++.|+.-.+.+.+...+.
T Consensus 95 ~v~i-----~-------~~~--y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~ 147 (375)
T 7mdh_A 95 EVSI-----G-------IDP--YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 147 (375)
T ss_dssp EEEE-----E-------SCH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEE-----e-------cCC--HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222 1 112 256689999999998754 34556678999999999999988773
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=94.38 E-value=0.026 Score=57.10 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=30.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+||+|-+|..+++.+...|. +|++..|+.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 184 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGC---RVVGIAGGA 184 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 589999999999999999988888885 567777754
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.041 Score=56.21 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=30.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+||+|-+|...++.+...|. +|++..|+.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 202 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGA---EVYATAGST 202 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 579999999999999999999988885 567888764
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.30 E-value=0.055 Score=55.73 Aligned_cols=36 Identities=14% Similarity=0.136 Sum_probs=30.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|+|+|+ |-+|..+++.|...|. +|++..|+.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga---~V~~~d~~~ 199 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGA---QVTILDVNH 199 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 57899999998 9999999999999885 456777653
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=94.29 E-value=0.13 Score=51.97 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
.|++|||+||+|-+|...+..+...|. +|++..|+....
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~~~~ 182 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNF---RLIAVTRNNKHT 182 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSSTTH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC---EEEEEeCCHHHH
Confidence 589999999999999999988888884 568888876543
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=94.27 E-value=0.081 Score=53.20 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=30.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+||+|-+|...+..+...|. +|++..|+.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 175 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGA---KLIGTVSSP 175 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 589999999999999999999888885 567888754
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=94.18 E-value=0.099 Score=53.09 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=30.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~ 49 (570)
.|++||||||+|-+|..+++.+... |. +|++..|+.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga---~Vi~~~~~~ 206 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA---TIIGVDVRE 206 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCC---EEEEEESSH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCC---eEEEEcCCH
Confidence 5799999999999999999999888 84 467777753
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.14 E-value=0.059 Score=54.71 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=30.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+||+|.+|..+++.+...|. +|++..|+.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~---~Vi~~~~~~ 201 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGA---RVIATAGSE 201 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 578999999999999999998888874 567777753
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=94.13 E-value=0.15 Score=51.77 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=31.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.|++|||+||+|-+|...+..+...|. +|++..|+...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga---~Vi~~~~~~~~ 196 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGA---KVIAVVNRTAA 196 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSGGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCCHHH
Confidence 589999999999999999998888884 56788876543
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=93.91 E-value=0.057 Score=55.09 Aligned_cols=33 Identities=18% Similarity=0.408 Sum_probs=26.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++|.|.||||.+|+.+++.|++. +.+ .+..+.+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~-elv~v~s 37 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-PYL-EVKQVTS 37 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-TTE-EEEEEBC
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCc-EEEEEEC
Confidence 68999999999999999998864 555 4555555
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=93.90 E-value=0.61 Score=46.16 Aligned_cols=121 Identities=12% Similarity=0.150 Sum_probs=68.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhh---------hhhHHHHHhhhcc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLA---------KDLFNVLKEKWGT 77 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~---------~~~f~~l~~~~~~ 77 (570)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++.+..-..+-..|. ++. ...-++|++-+|
T Consensus 31 q~kL~~~~VlVvGa-GGlGs~va~~La~aG--VG~i~lvD~D~Ve~sNL~Rq---~~~~~diG~~Ka~aa~~~L~~iNP- 103 (292)
T 3h8v_A 31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCG--IGKLLLFDYDKVELANMNRL---FFQPHQAGLSKVQAAEHTLRNINP- 103 (292)
T ss_dssp -CGGGGCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBC---------------CCTTSBHHHHHHHHHHHHCT-
T ss_pred HHHHhCCeEEEECc-CHHHHHHHHHHHHcC--CCEEEEECCCccChhhcccc---cCChhhcCchHHHHHHHHHHhhCC-
Confidence 34567899999994 889999999999987 67888877665333333331 110 011234444443
Q ss_pred cccccccCceEEEEccCCCCCCCCChhhhHHHHh-----------CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHH
Q 008315 78 RLNSFISEKITFVAGDISSEDLGLKDSNLKEELW-----------NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVN 146 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~-----------~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~ 146 (570)
.-+++.+..+++ +.+..+.++ +++|+|+.+... ... -..+-+
T Consensus 104 ------~v~v~~~~~~l~-------~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn------~~~--------R~~in~ 156 (292)
T 3h8v_A 104 ------DVLFEVHNYNIT-------TVENFQHFMDRISNGGLEEGKPVDLVLSCVDN------FEA--------RMTINT 156 (292)
T ss_dssp ------TSEEEEECCCTT-------SHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS------HHH--------HHHHHH
T ss_pred ------CcEEEEecccCC-------cHHHHHHHhhhhcccccccCCCCCEEEECCcc------hhh--------hhHHHH
Confidence 245777777776 322223333 689999987543 221 123445
Q ss_pred HHHHccCceEEEEEecc
Q 008315 147 FAKKCVKLKVFVHVSTA 163 (570)
Q Consensus 147 ~a~~~~~lk~fV~vSTa 163 (570)
+|.+. + +.+|+.+..
T Consensus 157 ~c~~~-~-~Pli~~gv~ 171 (292)
T 3h8v_A 157 ACNEL-G-QTWMESGVS 171 (292)
T ss_dssp HHHHH-T-CCEEEEEEC
T ss_pred HHHHh-C-CCEEEeeee
Confidence 66665 3 467776553
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=93.87 E-value=0.04 Score=56.58 Aligned_cols=39 Identities=13% Similarity=0.248 Sum_probs=28.4
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
..++..+|.|.||||.+|+.+++.|+++ +++. +..+.+.
T Consensus 12 ~~M~~~kV~IiGAtG~iG~~llr~L~~~-p~~e-lvai~~~ 50 (359)
T 1xyg_A 12 KPEKDIRIGLLGASGYTGAEIVRLLANH-PHFQ-VTLMTAD 50 (359)
T ss_dssp ---CCEEEEEECCSSHHHHHHHHHHHTC-SSEE-EEEEBCS
T ss_pred ccccCcEEEEECcCCHHHHHHHHHHHcC-CCcE-EEEEeCc
Confidence 3455679999999999999999999875 5654 5555543
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.13 Score=50.92 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=31.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++++|+|| |.+|++++..|.+.|. ++|++..|+.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~--~~v~i~~R~~ 161 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGV--QKLQVADLDT 161 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEECCH
Confidence 47899999997 8899999999999864 5778888874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=93.75 E-value=0.055 Score=54.90 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=30.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+||+|.+|..+++.+...|. +|++..|+.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~---~V~~~~~~~ 190 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGC---YVVGSAGSK 190 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 579999999999999999998888884 567777753
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=93.73 E-value=0.096 Score=52.86 Aligned_cols=37 Identities=8% Similarity=0.064 Sum_probs=30.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.|++|||+||+|-+|...+..+...|. +|++..|+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga---~Vi~~~~~~ 183 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA---HTIAVASTD 183 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 3589999999999999999998888774 567877753
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=93.68 E-value=0.89 Score=45.54 Aligned_cols=118 Identities=15% Similarity=0.135 Sum_probs=71.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|+|| |.+|..++..|+..+. +..|.++.+.+ ++++.+... +....+ +....+.+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~-~~ei~L~Di~~------~~~~g~~~d------l~~~~~-----~~~~~~~v~ 65 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSI-VDELVIIDLDT------EKVRGDVMD------LKHATP-----YSPTTVRVK 65 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCS-CSEEEEECSCH------HHHHHHHHH------HHHHGG-----GSSSCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCh------hHhhhhhhh------HHhhhh-----hcCCCeEEE
Confidence 4579999998 9999999999988764 45666665542 122111110 000000 111233333
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
. | + .+.++++|+||-+|+...- .......+..|+.-.+.+.+.+.+. .....+.+.|
T Consensus 66 ~-~---------~----~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 66 A-G---------E----YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp E-C---------C----GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred e-C---------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 2 2 1 1335899999999987542 3445566888999999999888776 4455555443
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=93.66 E-value=1 Score=45.10 Aligned_cols=110 Identities=16% Similarity=0.078 Sum_probs=67.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|+|+ |.+|..++..|+..|. ..|.++.++...... +-...++....-+ .+ ...++..-
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~--~~v~l~D~~~~~~~~-~g~a~dl~~~~~~------~~------~~~~i~~t 70 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKEL--ADVVLVDIPQLENPT-KGKALDMLEASPV------QG------FDANIIGT 70 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCGGGHHHH-HHHHHHHHHHHHH------HT------CCCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC--CeEEEEeccchHHHH-HHhhhhHHHhhhh------cc------CCCEEEEc
Confidence 4679999996 9999999999998775 467777775211101 1111112111000 00 01222221
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.| . ..++++|+||-+|+..+- .....+.+..|+.-.+.+.+.+.+.
T Consensus 71 -~d------------~--~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 71 -SD------------Y--ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp -SC------------G--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CC------------H--HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1 345899999999987543 3445677899999999999988775
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=93.65 E-value=0.7 Score=45.80 Aligned_cols=113 Identities=13% Similarity=0.028 Sum_probs=69.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|.|+|| |.+|..++..|...+. +..|.+..+.+...... .+ ++. ...+ .+ .....+...
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~-~~~v~L~D~~~~~~~g~-~~--dl~---------~~~~-~~----~~~~~i~~t 61 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLD-VDEIALVDIAEDLAVGE-AM--DLA---------HAAA-GI----DKYPKIVGG 61 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSC-CSEEEEECSSHHHHHHH-HH--HHH---------HHHH-TT----TCCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECChHHHHHH-HH--HHH---------hhhh-hc----CCCCEEEEe
Confidence 57999998 9999999999988774 35677777754321110 00 111 1100 00 011222211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
+ + .+.++++|+||.+|+..+- .....+.+..|+.-.+.+.+.+.+. +...++
T Consensus 62 ~---------d----~~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~i 114 (294)
T 1oju_A 62 A---------D----YSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKI 114 (294)
T ss_dssp S---------C----GGGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEE
T ss_pred C---------C----HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEE
Confidence 1 1 1455899999999997643 3445667899999999999988876 334433
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=93.60 E-value=0.26 Score=52.02 Aligned_cols=102 Identities=11% Similarity=0.167 Sum_probs=64.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.++|+|.| .|-||++++.+|.++. ..+..|.+..+.+.+....+. .++.+.
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~---------------------------~g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQ---------------------------YGVSFK 64 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHH---------------------------HTCEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhh---------------------------cCCcee
Confidence 36799999 7999999999999874 233467666655544432211 134667
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAY 164 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~ 164 (570)
..+++..+ -++....++++.|+|+|++-.. + ...++++|.+. + +-|++|+.
T Consensus 65 ~~~Vdadn----v~~~l~aLl~~~DvVIN~s~~~-~--------------~l~Im~aclea-G---v~YlDTa~ 115 (480)
T 2ph5_A 65 LQQITPQN----YLEVIGSTLEENDFLIDVSIGI-S--------------SLALIILCNQK-G---ALYINAAT 115 (480)
T ss_dssp ECCCCTTT----HHHHTGGGCCTTCEEEECCSSS-C--------------HHHHHHHHHHH-T---CEEEESSC
T ss_pred EEeccchh----HHHHHHHHhcCCCEEEECCccc-c--------------CHHHHHHHHHc-C---CCEEECCC
Confidence 77776321 1122334556679999955332 1 23478899987 3 46788875
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=93.60 E-value=0.69 Score=46.19 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=69.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++-.|+..+. +..|.++.+.+... +....++.... + + ...+.+..+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~k~---~g~a~dl~~~~---------~-----~-~~~~~v~~~ 60 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGV-AREVVLVDLDRKLA---QAHAEDILHAT---------P-----F-AHPVWVWAG 60 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHH---HHHHHHHHTTG---------G-----G-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHH---HHHHHHHHHhH---------h-----h-cCCeEEEEC
Confidence 57999998 9999999998888754 57788887753111 11111221110 0 0 123333322
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
| . +.++++|+||.+|+..+- .....+....|+...+.+.+.+.+. +....+.
T Consensus 61 ~---------~-----~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~ii 113 (310)
T 2xxj_A 61 S---------Y-----GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLL 113 (310)
T ss_dssp C---------G-----GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEE
T ss_pred C---------H-----HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEE
Confidence 1 1 335899999999987542 3344566788999999999888776 3344333
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=93.56 E-value=0.078 Score=53.87 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=27.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLI 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lv 46 (570)
.++|.|.||||.+|+.+++.|++++ |.+ .+.++.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~-elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVD-ELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEE-EEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCE-EEEEEE
Confidence 3689999999999999999998865 555 444554
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=93.47 E-value=0.11 Score=51.67 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=31.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.|++|+|+||+|.+|...+..+...|. +|++..|+...
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga---~Vi~~~~~~~~ 162 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPEK 162 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGGG
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH
Confidence 589999999999999999988887774 57788886543
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=93.45 E-value=0.044 Score=56.26 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=26.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
.+|.|.||||++|+.|++.|.++++....+..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEE
Confidence 5899999999999999998887554444555554
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=93.30 E-value=0.34 Score=53.11 Aligned_cols=127 Identities=13% Similarity=0.103 Sum_probs=73.7
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLA---KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~---~~~f~~l~~~~~~~~ 79 (570)
++-+++.+|+|.|+ |.+|..+++.|.+.| |.+|.++....-..+-..|- .+++-+ ...-+++++-.|
T Consensus 12 Q~kL~~s~VlVVGa-GGLGsevak~La~aG--VG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP--- 85 (640)
T 1y8q_B 12 AEAVAGGRVLVVGA-GGIGCELLKNLVLTG--FSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYP--- 85 (640)
T ss_dssp HHHHHHCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCT---
T ss_pred HHHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCC---
Confidence 45567889999996 889999999999987 67888877654322211110 000000 011234444433
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+|..+..+++.. +....+++++|+||.+... .. .-..+-++|.+. + ..+|+
T Consensus 86 ----~v~V~a~~~~i~~~-------~~~~~~~~~~DlVvda~Dn------~~--------aR~~ln~~c~~~-~-iPlI~ 138 (640)
T 1y8q_B 86 ----KANIVAYHDSIMNP-------DYNVEFFRQFILVMNALDN------RA--------ARNHVNRMCLAA-D-VPLIE 138 (640)
T ss_dssp ----TCEEEEEESCTTST-------TSCHHHHTTCSEEEECCSC------HH--------HHHHHHHHHHHH-T-CCEEE
T ss_pred ----CCeEEEEecccchh-------hhhHhhhcCCCEEEECCCC------HH--------HHHHHHHHHHHc-C-CCEEE
Confidence 24677888888742 2113567899999987443 22 122344556554 3 45666
Q ss_pred Eeccccc
Q 008315 160 VSTAYVA 166 (570)
Q Consensus 160 vSTa~v~ 166 (570)
.++....
T Consensus 139 ~g~~G~~ 145 (640)
T 1y8q_B 139 SGTAGYL 145 (640)
T ss_dssp EEEETTE
T ss_pred EEEeccc
Confidence 6655433
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=93.25 E-value=0.95 Score=45.48 Aligned_cols=109 Identities=18% Similarity=0.158 Sum_probs=66.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++.++|.|+|| |.+|..++..|+..+.. .|.++.+.+...... ..++.....|. + ...++..
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~--~v~L~Di~~~~~~g~---~~dl~~~~~~~------~------~~~~v~~ 66 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELG--DVVLFDIAEGTPQGK---GLDIAESSPVD------G------FDAKFTG 66 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCC--EEEEECSSSSHHHHH---HHHHHHHHHHH------T------CCCCEEE
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCC--eEEEEeCCchhHHHH---HHHHhchhhhc------C------CCCEEEE
Confidence 46689999998 99999999999887762 677777765432211 11221111000 0 0112221
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
..| . +.++++|+||.+|+..+- .....+.+..|+.-.+.+.+.+.+.
T Consensus 67 -t~d------------~--~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~ 114 (324)
T 3gvi_A 67 -AND------------Y--AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKY 114 (324)
T ss_dssp -ESS------------G--GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHH
T ss_pred -eCC------------H--HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence 112 1 355899999999986532 2333456788999999999888775
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=93.25 E-value=0.32 Score=49.87 Aligned_cols=33 Identities=12% Similarity=0.264 Sum_probs=24.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCC-ccEEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPN-VKKLYLL 45 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~-V~~i~~l 45 (570)
++|.|.||||++|..|+++||...|. ...+..+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ 34 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFF 34 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEE
Confidence 47999999999999999967665551 2344444
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=93.09 E-value=0.1 Score=53.45 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=30.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|++|||+||+|.+|..+++.+...|. +|++..|+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga---~Vi~~~~~ 197 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKC---HVIGTCSS 197 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC---EEEEEECC
Confidence 578999999999999999998888774 56788775
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=93.08 E-value=0.37 Score=49.16 Aligned_cols=124 Identities=13% Similarity=0.123 Sum_probs=72.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh--h-hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVL--A-KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~~ 79 (570)
++-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++.+..-..+-..|-. +++- + ...-+++++-+|
T Consensus 113 q~~L~~~~VlvvG~-GglGs~va~~La~aG--vg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np--- 186 (353)
T 3h5n_A 113 QDKLKNAKVVILGC-GGIGNHVSVILATSG--IGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS--- 186 (353)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---
T ss_pred HHHHhCCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC---
Confidence 56678899999996 779999999999987 678888877543222111100 0000 0 011234444443
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
.-+++.+..+++.. .+. .. ++++|+||.+... +.+ .+ ..+-++|.+. + +.+|+
T Consensus 187 ----~v~v~~~~~~i~~~------~~~-~~-~~~~DlVvd~~Dn--~~~-~r----------~~ln~~c~~~-~-~p~i~ 239 (353)
T 3h5n_A 187 ----EISVSEIALNINDY------TDL-HK-VPEADIWVVSADH--PFN-LI----------NWVNKYCVRA-N-QPYIN 239 (353)
T ss_dssp ----TSEEEEEECCCCSG------GGG-GG-SCCCSEEEECCCC--STT-HH----------HHHHHHHHHT-T-CCEEE
T ss_pred ----CCeEEEeecccCch------hhh-hH-hccCCEEEEecCC--hHH-HH----------HHHHHHHHHh-C-CCEEE
Confidence 24677888888742 223 24 7899999997643 211 11 1234566665 4 45777
Q ss_pred Eecc
Q 008315 160 VSTA 163 (570)
Q Consensus 160 vSTa 163 (570)
.+..
T Consensus 240 ~~~~ 243 (353)
T 3h5n_A 240 AGYV 243 (353)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=93.00 E-value=2 Score=43.13 Aligned_cols=106 Identities=10% Similarity=0.022 Sum_probs=65.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++-.|+..+. +..|.++.+.+... +....++.... .+ ...+.+..
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~-~~el~L~Di~~~~~---~g~~~dl~~~~--------------~~-~~~~~i~~ 68 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGI-AQEIGIVDIFKDKT---KGDAIDLSNAL--------------PF-TSPKKIYS 68 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSCHHHH---HHHHHHHHTTG--------------GG-SCCCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchHh---HHHHHHHHHHH--------------Hh-cCCeEEEE
Confidence 468999998 9999999998887663 56777777732111 11111121110 01 12333332
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++ . ..++++|+||.+|+..+- .....+.+..|+...+.+.+.+.+.
T Consensus 69 ~~---------~-----~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~ 115 (326)
T 2zqz_A 69 AE---------Y-----SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp CC---------G-----GGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC---------H-----HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1 335899999999987532 2334466788999999999888775
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=92.90 E-value=0.77 Score=46.32 Aligned_cols=110 Identities=16% Similarity=0.070 Sum_probs=67.7
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
....++|.|+|| |.+|..++..|+..+. +..+.++.+.... .+....++.....| .....
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~---~~g~a~DL~~~~~~---------------~~~~~ 75 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDL-ADELALVDVIEDK---LKGEMMDLQHGSLF---------------LKTPK 75 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHH---HHHHHHHHHHTGGG---------------CSCCE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCC-CceEEEEeCChHH---HHHHHHhhhhhhhc---------------cCCCe
Confidence 346789999997 9999999999998763 3566676664211 11111122211111 01112
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+..+ +. ..++++|+||.+||..+- .+.-.+.++.|+.-.+.+.+.+.+.
T Consensus 76 i~~~~-----------d~--~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~ 126 (331)
T 4aj2_A 76 IVSSK-----------DY--SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY 126 (331)
T ss_dssp EEECS-----------SG--GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred EEEcC-----------CH--HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211 11 235899999999997542 2344567899999999999888775
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=92.85 E-value=0.14 Score=52.38 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=29.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
|++|||+|| |-+|..++..+...|. +|++..|+.
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGL---EVWMANRRE 214 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTC---EEEEEESSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence 899999999 9999999998888884 578888875
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=92.82 E-value=0.1 Score=49.78 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=48.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|+|.|+ |.+|+.+++.|.+.|. |.++.|++. ++. ++ . .++.++
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~----v~vid~~~~------~~~-~~--------------------~-~~~~~i 54 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV----FVLAEDENV------RKK-VL--------------------R-SGANFV 54 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE----EEEESCGGG------HHH-HH--------------------H-TTCEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe----EEEEECCHH------HHH-HH--------------------h-cCCeEE
Confidence 3578999997 9999999999988764 345555432 111 00 0 347889
Q ss_pred EccCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 91 AGDISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
.||.++ .+.++.+ ++++|.||-+.+
T Consensus 55 ~gd~~~-------~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 55 HGDPTR-------VSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp ESCTTC-------HHHHHHTTCTTCSEEEECCS
T ss_pred EcCCCC-------HHHHHhcCcchhcEEEEcCC
Confidence 999984 4444444 678999997654
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=92.82 E-value=0.27 Score=50.50 Aligned_cols=36 Identities=11% Similarity=0.253 Sum_probs=27.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhC-CCccEEEEEEec
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQ-PNVKKLYLLIRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g-~~V~~i~~lvR~ 48 (570)
++|.|.||||++|+.|+++|+.+. ..+..|+++...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~ 38 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS 38 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC
Confidence 589999999999999999666543 345677777654
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=92.80 E-value=1.6 Score=43.66 Aligned_cols=113 Identities=12% Similarity=0.061 Sum_probs=66.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++-.|+..+. +..|.++.+.+... +....++.... + + ...+.+..+
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~-~~el~L~Di~~~~~---~g~~~dl~~~~---------~-----~-~~~~~v~~~ 65 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDRT---KGDALDLEDAQ---------A-----F-TAPKKIYSG 65 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHH---HHHHHHHHGGG---------G-----G-SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCC-CCEEEEEeCCchHH---HHHHHHHHHHH---------H-----h-cCCeEEEEC
Confidence 69999998 9999999999988754 56787877742111 11111221110 0 1 123333322
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
+ . +.++++|+||.+|+..+- .....+.+..|+...+.+.+.+.+. .....+.+
T Consensus 66 ~---------~-----~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv 119 (318)
T 1ez4_A 66 E---------Y-----SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLV 119 (318)
T ss_dssp C---------G-----GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred C---------H-----HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 1 1 335899999999987532 2223345788999999999888876 34444333
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=92.54 E-value=0.32 Score=50.78 Aligned_cols=73 Identities=16% Similarity=0.273 Sum_probs=50.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+++|+|.|. |-+|+.+++.|.+.|..| .++.++.. +++ . ++ ...+.++.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~v---vvId~d~~------~v~-~---------~~-----------~~g~~vi~ 52 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKM---VVLDHDPD------HIE-T---------LR-----------KFGMKVFY 52 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCHH------HHH-H---------HH-----------HTTCCCEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCE---EEEECCHH------HHH-H---------HH-----------hCCCeEEE
Confidence 467999995 999999999999988654 45555431 221 1 11 13467899
Q ss_pred ccCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 92 GDISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
||.+ +.+.++.+ ++++++||-+..
T Consensus 53 GDat-------~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 53 GDAT-------RMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp SCTT-------CHHHHHHTTTTTCSEEEECCS
T ss_pred cCCC-------CHHHHHhcCCCccCEEEECCC
Confidence 9999 45555444 678999987654
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=92.52 E-value=0.082 Score=53.77 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=26.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
|.+|.|.||||++|..|++.|.++.+.+..+..+.
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 46899999999999999997777542333455554
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=92.45 E-value=0.18 Score=49.57 Aligned_cols=38 Identities=24% Similarity=0.430 Sum_probs=29.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+..+|.|+||+|.+|+.+++.+.+. +++.-+.++.|+.
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTG 43 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTT
T ss_pred cccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecC
Confidence 3468999999999999999998864 6665555556653
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=92.43 E-value=0.55 Score=48.25 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=25.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCC-ccEEEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPN-VKKLYLLI 46 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~-V~~i~~lv 46 (570)
..+|.|.||||++|..|+++||...|. +..+..+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~s 39 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFS 39 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEe
Confidence 468999999999999999966665541 23444443
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=92.42 E-value=0.13 Score=52.64 Aligned_cols=41 Identities=20% Similarity=0.335 Sum_probs=29.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES 53 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~ 53 (570)
..+|.|.||||++|..|++.|.+ .|.+.-+.+..|+..++.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~ 47 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKP 47 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSB
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCC
Confidence 46899999999999999995554 577654444445444544
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=92.42 E-value=0.13 Score=52.64 Aligned_cols=41 Identities=20% Similarity=0.335 Sum_probs=29.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES 53 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~ 53 (570)
..+|.|.||||++|..|++.|.+ .|.+.-+.+..|+..++.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~ 47 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKP 47 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSB
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCC
Confidence 46899999999999999995554 577654444445444544
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=92.41 E-value=0.3 Score=49.41 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=26.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.+|+|.||||++|+.|++.|.+ .|++.-+.+..|+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~-~p~~el~~l~s~~ 39 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNR-HPHMNITALTVSA 39 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEET
T ss_pred eEEEEECCCChHHHHHHHHHHh-CCCCcEEEEEecC
Confidence 5899999999999999998776 4666444444444
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=92.27 E-value=0.34 Score=49.11 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=30.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
+++|+|+||+|-+|...+..+...|. +|++..|+...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga---~Vi~~~~~~~~ 201 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGF---RPIVTVRRDEQ 201 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTC---EEEEEESCGGG
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCHHH
Confidence 48999999999999999988888884 56788876543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=91.98 E-value=1 Score=44.93 Aligned_cols=116 Identities=13% Similarity=0.062 Sum_probs=65.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++..|+..|. + .|.++.+++.... ....++.....+ .. ...++... .
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~-~-~v~L~Di~~~~~~---g~~~dl~~~~~~------~~------~~~~i~~t-~ 63 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKEL-G-DIVLLDIVEGVPQ---GKALDLYEASPI------EG------FDVRVTGT-N 63 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-S-EEEEECSSSSHHH---HHHHHHHTTHHH------HT------CCCCEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCC-C-eEEEEeCCccHHH---HHHHhHHHhHhh------cC------CCeEEEEC-C
Confidence 58999998 9999999999988774 2 3666665543221 111122111000 00 01122211 2
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
| . +.++++|+||.+|+..+-. ....+....|+...+.+.+.+.+. ....++.+.|
T Consensus 64 d------------~--~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~~t 119 (309)
T 1ur5_A 64 N------------Y--ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIMVN 119 (309)
T ss_dssp C------------G--GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGG-CTTCEEEECC
T ss_pred C------------H--HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEcC
Confidence 2 1 3358999999999875422 122344678888889998888776 3455555543
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=91.71 E-value=1.1 Score=45.10 Aligned_cols=108 Identities=17% Similarity=-0.007 Sum_probs=66.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
..++|.|+|+ |.+|..++..|+..|. +..+.++.+..... +....++.....| + ...++. .
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~-~~ev~L~Di~~~~~---~g~a~DL~~~~~~-------~------~~~~i~-~ 80 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDL-ADEVALVDVMEDKL---KGEMMDLEHGSLF-------L------HTAKIV-S 80 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCC-CSEEEEECSCHHHH---HHHHHHHHHHGGG-------S------CCSEEE-E
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEECCHHHH---HHHHHHhhhhhhc-------c------cCCeEE-E
Confidence 4579999998 9999999999998874 34666766633211 1111122211111 0 012222 1
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.+|+. . ++++|+||-+||..+- .+.-.+.+..|+.-.+.+.+.+.+.
T Consensus 81 t~d~~-------------~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~ 128 (330)
T 3ldh_A 81 GKDYS-------------V-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH 128 (330)
T ss_dssp ESSSC-------------S-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH
T ss_pred cCCHH-------------H-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 23432 2 4799999999997543 2334456888999999998888776
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=91.60 E-value=0.25 Score=50.07 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=27.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL 45 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l 45 (570)
.|++|||+||+|-+|...+..+...|. +|++.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga---~Vi~~ 181 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGA---RVFAT 181 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC---EEEEE
Confidence 579999999999999999998888885 45666
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=91.48 E-value=0.93 Score=46.01 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=71.6
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC----------------cccHHHHHHHHHhhhhhHHHH
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD----------------TESAALRFQNEVLAKDLFNVL 71 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~----------------~~~~~~rl~~~l~~~~~f~~l 71 (570)
+-+++.+|+|.|+ |.+|..+++.|.+.| |++|.++....- +....+- +-++|
T Consensus 32 ~~L~~~~VlivG~-GGlG~~ia~~La~~G--vg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~---------~~~~l 99 (346)
T 1y8q_A 32 KRLRASRVLLVGL-KGLGAEIAKNLILAG--VKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEA---------SLERA 99 (346)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHH---------HHHHH
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEECCCcchhhCCCCCccccccCcCCHHHH---------HHHHH
Confidence 3457899999995 779999999999987 678877732211 1111111 12344
Q ss_pred HhhhcccccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 72 KEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 72 ~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
++-.| .-++..+..++.. .. ..++++.|+||.+... ... -..+-++|.+.
T Consensus 100 ~~lnp-------~v~v~~~~~~~~~--------~~-~~~~~~~dvVv~~~d~------~~~--------r~~ln~~~~~~ 149 (346)
T 1y8q_A 100 QNLNP-------MVDVKVDTEDIEK--------KP-ESFFTQFDAVCLTCCS------RDV--------IVKVDQICHKN 149 (346)
T ss_dssp HHTCT-------TSEEEEECSCGGG--------CC-HHHHTTCSEEEEESCC------HHH--------HHHHHHHHHHT
T ss_pred HhHCC-------CeEEEEEecccCc--------ch-HHHhcCCCEEEEcCCC------HHH--------HHHHHHHHHHc
Confidence 44333 2456777776652 11 3566899999986432 222 22355667765
Q ss_pred cCceEEEEEecccccCC
Q 008315 152 VKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~ 168 (570)
+ ..||+.++...+|.
T Consensus 150 -~-ip~i~~~~~G~~G~ 164 (346)
T 1y8q_A 150 -S-IKFFTGDVFGYHGY 164 (346)
T ss_dssp -T-CEEEEEEEEBTEEE
T ss_pred -C-CCEEEEeecccEEE
Confidence 3 57888877766654
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=91.26 E-value=1.3 Score=44.52 Aligned_cols=116 Identities=14% Similarity=0.058 Sum_probs=67.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|.|| |.+|..++..|...|. + .|.+..+++..... ...++.. .+. ..+ ...++...
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~-~-~V~L~D~~~~~~~~---~~~~l~~-----~~~-~~~------~~~~i~~t- 69 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALREL-A-DVVLYDVVKGMPEG---KALDLSH-----VTS-VVD------TNVSVRAE- 69 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-C-EEEEECSSSSHHHH---HHHHHHH-----HHH-HTT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEECChhHHHH---HHHHHHh-----hhh-ccC------CCCEEEEe-
Confidence 479999998 9999999999998886 2 36677676432221 1101111 000 000 01222221
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-cc-----CHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DE-----RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~-----~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
.+. ++.++++|+||-+++...- .. .-.+....|+.-.+.+.+.+.+. ....++.+
T Consensus 70 ------------~d~-~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~vi~ 130 (331)
T 1pzg_A 70 ------------YSY-EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIV 130 (331)
T ss_dssp ------------CSH-HHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred ------------CCH-HHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 122 2456899999999976432 22 22344677888888888887775 23444433
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=91.20 E-value=0.47 Score=48.47 Aligned_cols=36 Identities=8% Similarity=0.138 Sum_probs=30.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.++++|+|+|+ |-+|+.++..|...|. +|++..|+.
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga---~V~v~dr~~ 200 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGA---QVQIFDINV 200 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 46799999998 9999999999998884 567887764
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.94 E-value=0.52 Score=48.24 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=28.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
.|++|||+||+|-+|...+..+...|. +|++..+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga---~Vi~~~~ 216 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDA---HVTAVCS 216 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEeC
Confidence 578999999999999999988877774 5666664
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=90.87 E-value=0.34 Score=49.33 Aligned_cols=38 Identities=18% Similarity=0.258 Sum_probs=28.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEE-EecCCcc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL-IRAADTE 52 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l-vR~~~~~ 52 (570)
.+|.|.||||++|..|++.|.+. |.++ |..+ .++..++
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~h-P~~e-l~~l~S~~~aG~ 52 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNH-PEAK-ITYLSSRTYAGK 52 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHC-TTEE-EEEEECSTTTTS
T ss_pred eEEEEECCCCHHHHHHHHHHHcC-CCcE-EEEEeCcccccC
Confidence 58999999999999999998875 7664 4444 3433443
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=90.66 E-value=0.25 Score=46.07 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=28.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++|+|+||+|++|+.++..|++.|+ +|++..|+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~---~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH---EIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC---EEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4799999999999999999999885 456777753
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=90.50 E-value=0.18 Score=51.13 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=30.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+||+|-+|...+..+...|. +|++..++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 185 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL---RVITTASRN 185 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEECCSH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 689999999999999999988887774 567777753
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=90.43 E-value=0.39 Score=48.48 Aligned_cols=35 Identities=9% Similarity=0.108 Sum_probs=28.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|++|||+|| |-+|..++..+...|. +|+++.|+.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga---~Vi~~~~~~ 198 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGL---NVVAVDIGD 198 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEeCCH
Confidence 5899999999 6699999988887774 567877753
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=90.22 E-value=0.23 Score=50.29 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=29.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|++|||+|| |-+|...+..+...|. .+|++..|+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~ 201 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGA--YPVIVSEPS 201 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 6899999999 9999999988887775 245777775
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=90.20 E-value=0.45 Score=48.42 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=31.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
.|.+|||+|| |-+|...+..+...|. +|++..|+....
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga---~Vi~~~~~~~~~ 216 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSRKR 216 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSSTTH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEcCCHHHH
Confidence 5789999999 9999999988877774 478888876543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=90.14 E-value=0.27 Score=48.94 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=31.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|+|+|+ |-+|+.++..|++.|. .+|++..|+.
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~--~~V~v~nR~~ 175 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAA--ERIDMANRTV 175 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTC--SEEEEECSSH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 46899999997 7799999999998874 5678888864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=89.65 E-value=0.33 Score=51.02 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=29.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
-.|++|||+||+|-+|...+..+...|. ++++.+++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga---~vi~~~~~ 254 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGG---IPVAVVSS 254 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---EEEEEeCC
Confidence 4689999999999999999988888774 45666664
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=89.61 E-value=0.4 Score=47.17 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=31.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
+++++|+|+|+ |-+|+.++..|.+.|. ++|++..|+..
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~~ 152 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVR--PTLTVANRTMS 152 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCC--SCCEEECSCGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCC--CEEEEEeCCHH
Confidence 46899999996 8899999999999885 34577888753
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=89.50 E-value=7.3 Score=38.72 Aligned_cols=105 Identities=16% Similarity=0.104 Sum_probs=63.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..|++.|+ +..|.+..|++.. .+.+..++. ...+ + .....+...
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~-~~~V~l~D~~~~~---~~~~~~~l~---------~~~~--~----~~~~~i~~~ 60 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKR---AEGDALDLI---------HGTP--F----TRRANIYAG 60 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHH---------HHGG--G----SCCCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCeEEEEeCChHH---HHHHHHHHH---------hhhh--h----cCCcEEEeC
Confidence 47999997 9999999999999886 4567777775321 111111111 0000 0 011122111
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
| . ..++++|+||-+++..... ..-.+....|+...+.+++...+.
T Consensus 61 d------------~--~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (319)
T 1a5z_A 61 D------------Y--ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY 106 (319)
T ss_dssp C------------G--GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------------H--HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1 2347899999999875432 223455778888888888887764
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=89.49 E-value=0.67 Score=46.83 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=59.5
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh--h-hhhHHHHHhhhcccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVL--A-KDLFNVLKEKWGTRLNS 81 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~~~~ 81 (570)
-+++++|+|.|+ |-+|+.+++.|.+.| |.+|.++.+..-..+-..|-. +++- + ...-+++++-+|
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aG--Vg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP----- 102 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP----- 102 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCC-----
Confidence 457899999995 889999999999976 688888766442211111100 0000 0 011223444433
Q ss_pred cccCceEEEEccCCCCCCCCCh-------hhhHHHHhCCccEEEEcCcc
Q 008315 82 FISEKITFVAGDISSEDLGLKD-------SNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~-------~~~~~~l~~~vdiVih~Aa~ 123 (570)
.-+++.+..++..++.-+++ .+....++++.|+||.+...
T Consensus 103 --~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn 149 (340)
T 3rui_A 103 --LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 149 (340)
T ss_dssp --TCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred --CCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence 23566666666433322221 12234677889999998665
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=89.46 E-value=2.9 Score=41.70 Aligned_cols=107 Identities=15% Similarity=0.123 Sum_probs=64.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++..|+..+. +..|+++.+++.. .+....++.. ..+ +....+.+..
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~-~~ev~l~Di~~~~---~~~~~~dl~~---------~~~-----~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESK---AIGDAMDFNH---------GKV-----FAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHHH---------HTT-----SSSSCCEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEeCCcch---HHHHHhhHHH---------Hhh-----hcCCCeEEEc
Confidence 369999998 9999999998888764 4678888775321 1111111111 000 0111333332
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+| . ..++++|+||-+|+..+-. ....+.+..|..-.+.+.+.+.+.
T Consensus 67 ~~----------~----~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 67 GD----------Y----DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp CC----------G----GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred Cc----------H----HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH
Confidence 11 1 3357999999999875422 222344677888888888877775
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=89.29 E-value=0.17 Score=44.29 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=28.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.+++|+|.|+ |.+|+.++..|.+.|. . |++..|+.
T Consensus 20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~--~-v~v~~r~~ 54 (144)
T 3oj0_A 20 GGNKILLVGN-GMLASEIAPYFSYPQY--K-VTVAGRNI 54 (144)
T ss_dssp CCCEEEEECC-SHHHHHHGGGCCTTTC--E-EEEEESCH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCC--E-EEEEcCCH
Confidence 4899999995 9999999999988663 4 77777764
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=89.01 E-value=0.52 Score=47.10 Aligned_cols=36 Identities=11% Similarity=0.128 Sum_probs=29.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
-.|.+|+|+||+|-+|...+..+...|. +|++..++
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga---~vi~~~~~ 186 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT---TVITTASK 186 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEECH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCC---EEEEEecc
Confidence 3689999999999999999988888774 45666643
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=89.00 E-value=0.7 Score=50.17 Aligned_cols=97 Identities=18% Similarity=0.125 Sum_probs=58.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc----------------ccHHHHHHHHHhhhhhHHHH
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT----------------ESAALRFQNEVLAKDLFNVL 71 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~----------------~~~~~rl~~~l~~~~~f~~l 71 (570)
+-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++....-. ....+.+ -++|
T Consensus 323 ~kL~~~kVLIVGa-GGLGs~va~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaa---------a~~L 390 (598)
T 3vh1_A 323 DIIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELA---------AASL 390 (598)
T ss_dssp HHHHTCEEEEECC-SHHHHHHHHHHHTTT--CCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHH---------HHHH
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEECCCcccccccccccccchhhcCcHHHHHH---------HHHH
Confidence 4457899999995 779999999999876 7888888433211 1111111 1233
Q ss_pred HhhhcccccccccCceEEEEccCCCCCCCCC-------hhhhHHHHhCCccEEEEcCcc
Q 008315 72 KEKWGTRLNSFISEKITFVAGDISSEDLGLK-------DSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 72 ~~~~~~~~~~~~~~kv~~v~gDl~~~~lgls-------~~~~~~~l~~~vdiVih~Aa~ 123 (570)
++-.| .-+++.+..++..|+..++ +.+..+.++++.|+||.|...
T Consensus 391 ~~iNP-------~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn 442 (598)
T 3vh1_A 391 KRIFP-------LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 442 (598)
T ss_dssp HHHCT-------TCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSB
T ss_pred HhHCC-------CcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCC
Confidence 33333 2356667666644433332 122234677889999997654
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=88.77 E-value=2 Score=42.65 Aligned_cols=105 Identities=19% Similarity=0.100 Sum_probs=58.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+|| |.+|..++..|...|. +..|.++.+++. +++....+ +....+ + ...+.+..+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~-~~eV~L~D~~~~------~~~~~~~~------l~~~~~-----~-~~~~~i~~~ 60 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGS-CSELVLVDRDED------RAQAEAED------IAHAAP-----V-SHGTRVWHG 60 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHH------HHHHHHHH------HTTSCC-----T-TSCCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCCHH------HHHHHHHh------hhhhhh-----h-cCCeEEEEC
Confidence 47999997 9999999999988875 346777777531 22111100 000000 0 012222211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
| . ..++++|+||-+++... ......+.+..|+...+.+.+...+.
T Consensus 61 ~------------~--~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (304)
T 2v6b_A 61 G------------H--SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRA 106 (304)
T ss_dssp C------------G--GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHH
T ss_pred C------------H--HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh
Confidence 1 1 33579999999997643 22233345678999888988887775
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=88.33 E-value=0.74 Score=48.52 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=29.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
-.|.+|+|+||+|-+|...+..+...|. ++++++++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga---~vi~~~~~ 262 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGA---NPICVVSS 262 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC---eEEEEECC
Confidence 3578999999999999999988888774 45677764
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=87.95 E-value=0.5 Score=47.56 Aligned_cols=71 Identities=10% Similarity=0.067 Sum_probs=48.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|+|.|+ |-+|+.+++.|.+.|. +.++.+++.. .+ +. ..++.++.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~----v~vid~~~~~---~~-~~------------------------~~~~~~i~ 161 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV----FVLAEDENVR---KK-VL------------------------RSGANFVH 161 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE----EEEESCGGGH---HH-HH------------------------HTTCEEEE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc----EEEEeCChhh---hh-HH------------------------hCCcEEEE
Confidence 458999996 9999999999998774 3444443321 11 22 14578999
Q ss_pred ccCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 92 GDISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
||.+ +++.++++ ++++|.|+-+.+
T Consensus 162 gd~~-------~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 162 GDPT-------RVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp SCTT-------SHHHHHHTCSTTEEEEEECCS
T ss_pred eCCC-------CHHHHHhcChhhccEEEEcCC
Confidence 9999 44444455 678999987654
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=87.94 E-value=0.55 Score=47.93 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=29.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.|++|||+|+ |-+|...+..+...|. +|++..|+..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga---~Vi~~~~~~~ 222 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGS---KVTVISTSPS 222 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 6899999996 9999999988887774 5677777643
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=87.77 E-value=9.8 Score=37.61 Aligned_cols=107 Identities=15% Similarity=0.038 Sum_probs=63.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..|.+.+. ...|.+..|++..... +..++... . . ... ...++... .
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~-g~~V~l~D~~~~~~~~---~~~~l~~~-~----~-~~~------~~~~i~~t-~ 62 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQL-ARELVLLDVVEGIPQG---KALDMYES-G----P-VGL------FDTKVTGS-N 62 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSSSHHHH---HHHHHHTT-H----H-HHT------CCCEEEEE-S
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHH---HHHhHHhh-h----h-ccc------CCcEEEEC-C
Confidence 47999998 9999999999887532 2466788886542221 11111111 0 0 000 01122211 1
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
| . +. ++++|+||-+++.... .....+.+..|+.-.+.+.+.+.+.
T Consensus 63 d------------~-~~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~ 108 (310)
T 1guz_A 63 D------------Y-AD-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH 108 (310)
T ss_dssp C------------G-GG-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------------H-HH-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 13 5899999999986533 2334566788999988888887765
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=87.68 E-value=0.83 Score=46.69 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=29.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.|.+|||+|+ |-+|...+..+...|. +|+++.++...
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga---~Vi~~~~~~~~ 230 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGA---HVVAFTTSEAK 230 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESSGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---EEEEEeCCHHH
Confidence 5789999998 7799999987777774 46788876543
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=87.68 E-value=1.1 Score=43.97 Aligned_cols=30 Identities=23% Similarity=0.377 Sum_probs=26.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++|++++|.|++|.+|+.++..|++.|..|
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtV 187 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATV 187 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeE
Confidence 489999999999999999999999988543
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=87.32 E-value=0.99 Score=45.82 Aligned_cols=36 Identities=11% Similarity=0.058 Sum_probs=28.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+|| |-+|...+.-+...|.. +|++..++.
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~--~Vi~~~~~~ 214 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGAC--PLVITDIDE 214 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCC--SEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCC--EEEEECCCH
Confidence 5899999998 99999999887777753 356666653
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=87.28 E-value=0.72 Score=46.80 Aligned_cols=35 Identities=20% Similarity=0.069 Sum_probs=27.4
Q ss_pred CEEEEECCccHhHHHH-HHHH-HHhCCCccEEEEEEecCC
Q 008315 13 KIILVSGVTGFVAKVF-IEKI-LRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~L-ve~L-l~~g~~V~~i~~lvR~~~ 50 (570)
.+|||+|| |-+|... +.-+ ...|. ++|+++.++..
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga--~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGY--ENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCC--CEEEEEECCCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCC--cEEEEEeCCcc
Confidence 99999999 9999998 7655 45554 45788888765
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=87.25 E-value=6.8 Score=38.73 Aligned_cols=102 Identities=14% Similarity=0.006 Sum_probs=63.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++..|+..|. +..|.+..+.+. . ..... ++.. .. ..++.. .
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~-~~ev~L~Di~~~-~--~g~a~-dl~~----------~~-------~~~i~~-t 69 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGI-ADRLVLLDLSEG-T--KGATM-DLEI----------FN-------LPNVEI-S 69 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECCC--------CHH-HHHH----------HT-------CTTEEE-E
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEcCCcc-h--HHHHH-HHhh----------hc-------CCCeEE-e
Confidence 478999995 9999999999999886 456777777653 1 11111 1111 00 124443 2
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+|+ ..++++|+||-+|+.........+.+..|+.-.+.+.+.+.+.
T Consensus 70 ~d~--------------~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~ 115 (303)
T 2i6t_A 70 KDL--------------SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHY 115 (303)
T ss_dssp SCG--------------GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCH--------------HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 2358999999999874333334556788888888888888774
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=86.90 E-value=0.81 Score=46.74 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=27.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|.+|||+|| |-+|...+.-+...|. ++|++..++
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~ 216 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGA--TTVILSTRQ 216 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 5899999998 9999999988877775 356666554
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=86.42 E-value=1.4 Score=47.87 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=60.5
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh--h-hhhHHHHHhhhcccccc
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVL--A-KDLFNVLKEKWGTRLNS 81 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~--~-~~~f~~l~~~~~~~~~~ 81 (570)
-+++++|+|.|+ |.+|..+++.|.+.| |.+|.++.+..-..+-..|-. +++- + ...-++|++-+|
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aG--VG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP----- 394 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWG--VRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP----- 394 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT-----
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC-----
Confidence 457899999995 889999999999976 688888877542221111100 0000 0 011234444443
Q ss_pred cccCceEEEEccCCCCCCCCCh-------hhhHHHHhCCccEEEEcCcc
Q 008315 82 FISEKITFVAGDISSEDLGLKD-------SNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 82 ~~~~kv~~v~gDl~~~~lgls~-------~~~~~~l~~~vdiVih~Aa~ 123 (570)
.-+++.+..++..++.-+++ .+....+++++|+||.|...
T Consensus 395 --~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn 441 (615)
T 4gsl_A 395 --LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS 441 (615)
T ss_dssp --TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred --CcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence 23566666666443322211 12234667889999998665
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=86.36 E-value=0.72 Score=45.00 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=30.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|+|+|+ |.+|+.++..|++.| .+|++..|+.
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G---~~V~v~~R~~ 152 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLD---CAVTITNRTV 152 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT---CEEEEECSSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcC---CEEEEEECCH
Confidence 47899999998 779999999999998 3567777763
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=86.18 E-value=7.8 Score=38.37 Aligned_cols=104 Identities=14% Similarity=0.102 Sum_probs=64.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE-c
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA-G 92 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~-g 92 (570)
+|.|+|| |.+|..++..|+..+. ..|.++.+.+..... ...++.....+ . ...+.+.. +
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l--~el~L~Di~~~~~~g---~~~dl~~~~~~------~--------~~~~~i~~t~ 60 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY--DDLLLIARTPGKPQG---EALDLAHAAAE------L--------GVDIRISGSN 60 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC--SCEEEECSSTTHHHH---HHHHHHHHHHH------H--------TCCCCEEEES
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCChhhHHH---HHHHHHHhhhh------c--------CCCeEEEECC
Confidence 4889998 9999999998887764 457777776432221 11122111100 0 01222222 2
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
| . ..++++|+||-+|+..+- .....+.+..|+.-.+.+.+.+.+.
T Consensus 61 d------------~--~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~ 106 (308)
T 2d4a_B 61 S------------Y--EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY 106 (308)
T ss_dssp C------------G--GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------------H--HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1 345899999999987542 2334456788999999999888774
|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* | Back alignment and structure |
|---|
Probab=86.17 E-value=1.2 Score=48.00 Aligned_cols=126 Identities=11% Similarity=0.088 Sum_probs=70.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHh-------h---hhhHHHHHhhhcc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVL-------A---KDLFNVLKEKWGT 77 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~-------~---~~~f~~l~~~~~~ 77 (570)
+-+++.+|+|.|+ |.+|..+++.|.+.| |++|.++....-..+-..| +++ + ...-++|++-+|
T Consensus 28 ~~L~~~~VlvvG~-GGlGseiak~La~aG--Vg~itlvD~D~Ve~sNL~R---Q~l~~~~dvG~~Ka~~a~~~l~~lNp- 100 (531)
T 1tt5_A 28 EALESAHVCLINA-TATGTEILKNLVLPG--IGSFTIIDGNQVSGEDAGN---NFFLQRSSIGKNRAEAAMEFLQELNS- 100 (531)
T ss_dssp HHHHHCEEEEECC-SHHHHHHHHHHHTTT--CSEEEEECCCBBCHHHHHH---CTTCCGGGBTSBHHHHHHHHHHTTCT-
T ss_pred HHHhcCeEEEECc-CHHHHHHHHHHHHcC--CCeEEEEeCCEechhhccc---CccCChhhcCcHHHHHHHHHHHHhCC-
Confidence 3356789999995 779999999999876 6788777644322221111 111 0 011234444433
Q ss_pred cccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 78 RLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 78 ~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
.-++..+..+++.. .+.. ..++++.|+||.+... ...- ..+-++|.+. + ..+
T Consensus 101 ------~v~v~~~~~~~~~~-----~~~~-~~~~~~~DvVi~~~d~------~~~r--------~~ln~~c~~~-~-ipl 152 (531)
T 1tt5_A 101 ------DVSGSFVEESPENL-----LDND-PSFFCRFTVVVATQLP------ESTS--------LRLADVLWNS-Q-IPL 152 (531)
T ss_dssp ------TSBCCEESSCHHHH-----HHSC-GGGGGGCSEEEEESCC------HHHH--------HHHHHHHHHT-T-CCE
T ss_pred ------CCeEEEeCCCcchh-----hhhh-HHHhcCCCEEEEeCCC------HHHH--------HHHHHHHHHc-C-CCE
Confidence 13455555544310 0111 2456789999987432 2222 2344567765 3 568
Q ss_pred EEEecccccCC
Q 008315 158 VHVSTAYVAGE 168 (570)
Q Consensus 158 V~vSTa~v~~~ 168 (570)
|+.++....|.
T Consensus 153 I~~~~~G~~G~ 163 (531)
T 1tt5_A 153 LICRTYGLVGY 163 (531)
T ss_dssp EEEEEETTEEE
T ss_pred EEEEecCCeEE
Confidence 88887766553
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=86.07 E-value=2.1 Score=43.47 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=28.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+| +|-+|...+..+...|. +|++..++.
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga---~Vi~~~~~~ 223 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGA---EVIVTSSSR 223 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCC---EEEEEecCc
Confidence 578999999 89999999988877774 567777653
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=85.72 E-value=1.2 Score=46.13 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=31.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
..|++|+|.|+ |-+|+.++..|...|. ++|++..|+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~--~~V~v~~r~~ 201 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 201 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCC--CEEEEEeCCH
Confidence 57999999997 9999999999998874 5678887764
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=85.56 E-value=0.85 Score=45.56 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=28.8
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
+|||+||+|-+|...+..+...|. +|++..++...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga---~vi~~~~~~~~ 186 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY---TVEASTGKAAE 186 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC---CEEEEESCTTC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC---EEEEEECCHHH
Confidence 899999999999999988887775 36788887543
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=85.50 E-value=2 Score=43.46 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=30.5
Q ss_pred CC-CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 EN-KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~-k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.| .+|||+||+|-+|...+.-+...|. ++++++++...
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga---~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCccc
Confidence 57 8999999999999999887777774 45677776543
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=85.45 E-value=3.7 Score=40.41 Aligned_cols=37 Identities=24% Similarity=0.386 Sum_probs=28.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
..+|.|.||+|-+|+.+++.+.+ .+++.-+-++.|+.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~-~~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQR-RKDVELCAVLVRKG 57 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHT-CSSEEEEEEBCCTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHh-CCCCEEEEEEecCC
Confidence 35899999999999999998876 46665555556643
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=85.42 E-value=2.3 Score=40.15 Aligned_cols=29 Identities=28% Similarity=0.402 Sum_probs=26.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++|++|||.|| |-+|...++.|++.|..|
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~V 57 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAI 57 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCCCE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEE
Confidence 58999999995 899999999999999765
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=85.40 E-value=0.84 Score=46.93 Aligned_cols=42 Identities=24% Similarity=0.293 Sum_probs=28.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEE--EecCCccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL--IRAADTES 53 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l--vR~~~~~~ 53 (570)
|+..+|.|.||||++|..|++.|.+ .|.+ .|..+ .++..++.
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~-hp~~-el~~l~aS~~saGk~ 60 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSK-HPEF-EIHALGASSRSAGKK 60 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-CSSE-EEEEEEECTTTTTSB
T ss_pred CCccEEEEECCCChHHHHHHHHHHc-CCCc-eEEEeeccccccCCC
Confidence 3456899999999999999996655 5665 45443 34444443
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=85.25 E-value=0.85 Score=40.04 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=36.4
Q ss_pred CCccchhhhcC-CCEEEEECCc---cHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 1 MELGSVVEFLE-NKIILVSGVT---GFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 1 ~~~~~i~~~~~-~k~VlITGaT---GFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
|+...+..+|+ .++|.|.|+| |-+|..+++.|++.|++ ||...+.
T Consensus 1 m~~~~l~~ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G~~---v~~vnp~ 49 (145)
T 2duw_A 1 MKENDIAGILTSTRTIALVGASDKPDRPSYRVMKYLLDQGYH---VIPVSPK 49 (145)
T ss_dssp CCCCSHHHHHHHCCCEEEESCCSCTTSHHHHHHHHHHHHTCC---EEEECSS
T ss_pred CCHHHHHHHHhCCCEEEEECcCCCCCChHHHHHHHHHHCCCE---EEEeCCc
Confidence 55566888886 8999999998 88999999999999975 4554443
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=85.22 E-value=10 Score=37.36 Aligned_cols=107 Identities=12% Similarity=0.061 Sum_probs=63.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|.|| |.+|..++..|.+.|. +..|.++.|++..... ..+ ++ ....+ + .....+..
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~-~~~V~l~d~~~~~~~~-~~~--~~---------~~~~~--~----~~~~~v~~ 66 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVEA-EVL--DM---------QHGSS--F----YPTVSIDG 66 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHHH-HHH--HH---------HHTGG--G----STTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-CCEEEEEeCChhHHHH-HHH--HH---------Hhhhh--h----cCCeEEEe
Confidence 368999997 9999999999998875 2456777775311110 000 00 00000 0 01112211
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
. + +. ..++++|+||-+++...- .....+.+..|....+.+++..++.
T Consensus 67 ~--~---------~~--~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~ 114 (319)
T 1lld_A 67 S--D---------DP--EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV 114 (319)
T ss_dssp E--S---------CG--GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C--C---------CH--HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 0 11 234789999999976432 2344556788888888888877764
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=85.13 E-value=1.8 Score=42.43 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=26.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++|++++|.|++|.+|+.++..|++.|..|
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtV 188 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATV 188 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 479999999999999999999999988543
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=84.77 E-value=9 Score=37.77 Aligned_cols=106 Identities=10% Similarity=0.029 Sum_probs=60.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.| +|.+|..++..|.+.|. ...|++..|+... .+.+..++.. ... .....+.....
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~-~~~V~l~d~~~~~---~~~~~~~l~~---------~~~-----~~~~~~~~~~~ 62 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGV-ADDYVFIDANEAK---VKADQIDFQD---------AMA-----NLEAHGNIVIN 62 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC-CSEEEEECSSHHH---HHHHHHHHHH---------HGG-----GSSSCCEEEES
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCC-CCEEEEEcCCHHH---HHHHHHHHHh---------hhh-----hcCCCeEEEeC
Confidence 5899999 79999999999999884 3467777775321 1122111100 000 00122333222
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-----cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-----FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-----f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
| . ..++++|+||-++.... ......+....|+...+.+++...+.
T Consensus 63 d------------~--~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 112 (309)
T 1hyh_A 63 D------------W--AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (309)
T ss_dssp C------------G--GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred C------------H--HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1 23478999999988643 11111233567888788888877664
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=84.70 E-value=2.6 Score=42.88 Aligned_cols=34 Identities=15% Similarity=-0.028 Sum_probs=28.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
-.|.+|||+||+|-+|...+..+...|. +|++.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga---~Vi~~~ 196 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY---IPIATC 196 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC---EEEEEe
Confidence 3678999999999999999988888785 455655
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=84.51 E-value=1.7 Score=44.59 Aligned_cols=36 Identities=14% Similarity=0.039 Sum_probs=30.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
..|++|+|+|+ |-+|..+++.+...|. +|++..|+.
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga---~V~~~d~~~ 201 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGA---TVTVLDINI 201 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 57899999997 9999999999998875 566777653
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=84.50 E-value=1.2 Score=44.78 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=28.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh--CCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV--QPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~--g~~V~~i~~lvR~~ 49 (570)
.|.+|||+|| |-+|...+..+... |. +|++..+++
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga---~Vi~~~~~~ 206 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNI---TIVGISRSK 206 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTC---EEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCC---EEEEEeCCH
Confidence 7899999999 99999999888777 63 467777653
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=84.28 E-value=1.7 Score=43.93 Aligned_cols=36 Identities=8% Similarity=0.010 Sum_probs=29.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.|.+|||+|+ |-+|...+..+...|. +|++..++..
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga---~Vi~~~~~~~ 215 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGH---HVTVISSSNK 215 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCChH
Confidence 6889999995 8999999988877774 5678887653
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=83.99 E-value=0.72 Score=46.55 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=27.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLL 45 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~l 45 (570)
++|.|.||||.+|+.|++.|+++++.+..++.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~ 33 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLY 33 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEe
Confidence 369999999999999999999777776666554
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=83.91 E-value=1.3 Score=45.78 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=28.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+|| |-+|...+.-+...|. .+|++..++.
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga--~~Vi~~~~~~ 248 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGA--SKVILSEPSE 248 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEECSCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCCH
Confidence 5789999998 9999999887777774 3566666553
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=83.58 E-value=2 Score=42.14 Aligned_cols=30 Identities=20% Similarity=0.164 Sum_probs=26.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+++|.|++|.+|+.++..|++.|..|
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtV 188 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTV 188 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeE
Confidence 479999999999999999999999988544
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=83.58 E-value=2.1 Score=42.23 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=27.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++|++++|.|++|.+|+.++..|++.|..|
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtV 192 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATV 192 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeE
Confidence 479999999999999999999999988543
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=83.46 E-value=1.5 Score=44.27 Aligned_cols=38 Identities=11% Similarity=0.232 Sum_probs=30.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
.|.+|||+|+ |-+|...+..+...|. +|++..++....
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~~~~ 213 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGA---EVSVFARNEHKK 213 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTC---EEEEECSSSTTH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC---eEEEEeCCHHHH
Confidence 5899999997 9999999888877774 567888776543
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=83.33 E-value=3.2 Score=48.14 Aligned_cols=39 Identities=10% Similarity=0.151 Sum_probs=32.3
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
++-+++.+|+|.|+ |.+|..+++.|.+.| |+++.++...
T Consensus 22 q~rL~~s~VlIvG~-GGlGseiak~La~aG--Vg~itlvD~D 60 (1015)
T 3cmm_A 22 MLKMQTSNVLILGL-KGLGVEIAKNVVLAG--VKSMTVFDPE 60 (1015)
T ss_dssp HHHHTTCEEEEECC-SHHHHHHHHHHHHHC--CSEEEEECCS
T ss_pred HHHHhcCEEEEECC-ChHHHHHHHHHHHcC--CCeEEEecCC
Confidence 44568899999995 779999999999987 6788777654
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=83.13 E-value=6.1 Score=37.81 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=24.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
++|.|.|++|-+|+.+++.+.+. ++. .+...+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~-elva~~d 33 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDL-TLSAELD 33 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTC-EEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCC-EEEEEEc
Confidence 47999999999999999998764 333 3344443
|
| >1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B* | Back alignment and structure |
|---|
Probab=82.98 E-value=1.6 Score=45.63 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=56.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHh---hhhhHHHHHhhhccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVL---AKDLFNVLKEKWGTRLNSF 82 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~---~~~~f~~l~~~~~~~~~~~ 82 (570)
+++.+|+|.|+ |-+|..+++.|.+.| |.+|.++....-..+-..|-. +++- ....-+++++-.|
T Consensus 38 L~~~~VlvvG~-GGlGs~va~~La~aG--vg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp------ 108 (434)
T 1tt5_B 38 LDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP------ 108 (434)
T ss_dssp HHTCCEEEECS-STHHHHHHHHHHHTT--CCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST------
T ss_pred hcCCEEEEECc-CHHHHHHHHHHHHcC--CCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC------
Confidence 47889999996 669999999999987 577877754332111111100 0000 0011234444443
Q ss_pred ccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 83 ISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 83 ~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
.-+++.+..++. +.+ ..+++++|+||.+..
T Consensus 109 -~v~v~~~~~~i~-------~~~--~~~~~~~DlVi~~~D 138 (434)
T 1tt5_B 109 -NCNVVPHFNKIQ-------DFN--DTFYRQFHIIVCGLD 138 (434)
T ss_dssp -TCCCEEEESCGG-------GBC--HHHHTTCSEEEECCS
T ss_pred -CCEEEEEecccc-------hhh--HHHhcCCCEEEECCC
Confidence 245777777776 233 266789999998844
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=82.84 E-value=1 Score=44.04 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=31.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++++|+|+ |-+|+.++..|.+.|. .+|++..|+.
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~--~~v~i~~R~~ 154 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGP--SELVIANRDM 154 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCC--SEEEEECSCH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCC--CEEEEEeCCH
Confidence 46899999996 7899999999999774 5778888864
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=82.51 E-value=1.3 Score=45.48 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=29.4
Q ss_pred CCCEEEEEC-CccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSG-VTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITG-aTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||.| |+|-+|...+.-+...|. +|++..++.
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga---~Vi~~~~~~ 206 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGI---KLVNIVRKQ 206 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTC---CEEEEESSH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 688999997 999999999988888885 457777653
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=82.25 E-value=2.5 Score=42.53 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=27.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+|+ |-+|...+..+...|. +|++..|+.
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~ 202 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGA---FVVCTARSP 202 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC---EEEEEcCCH
Confidence 5899999997 8999999987777774 366766653
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=82.24 E-value=1.9 Score=41.97 Aligned_cols=30 Identities=10% Similarity=0.135 Sum_probs=27.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
.+|++++|.|++|-+|+.++..|++.|..|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtV 177 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTV 177 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeE
Confidence 689999999999999999999999988644
|
| >3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=82.23 E-value=4.5 Score=46.92 Aligned_cols=133 Identities=13% Similarity=0.134 Sum_probs=73.4
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCc-----cEEEEEEecCCcccHHHHH----HHHHhhh---hhHHHHHhh
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNV-----KKLYLLIRAADTESAALRF----QNEVLAK---DLFNVLKEK 74 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V-----~~i~~lvR~~~~~~~~~rl----~~~l~~~---~~f~~l~~~ 74 (570)
++-+++.+|+|.|+ |.+|..+++.|.+.| | .+|.++....-..+-..|- .+++-+. ..-+++++-
T Consensus 420 q~kL~~~~VlvVGa-GGlGsevlk~La~~G--v~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~~aa~~l~~i 496 (1015)
T 3cmm_A 420 QKKIANSKVFLVGS-GAIGCEMLKNWALLG--LGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSEVAAEAVCAM 496 (1015)
T ss_dssp HHHHHTCEEEEECC-SHHHHHHHHHHHHHT--TTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEEec-CHHHHHHHHHHHHcC--cCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHHHHHHHHHHH
Confidence 45567899999996 779999999999987 5 6777765443222211110 0000000 012234444
Q ss_pred hcccccccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCc
Q 008315 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKL 154 (570)
Q Consensus 75 ~~~~~~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (570)
.|. ...+|+.+...++..+..+ ....+++++|+|+.+.... +. -..+-++|... +
T Consensus 497 NP~-----v~~~v~~~~~~i~~~~~~~----~~~~~~~~~D~Vi~a~Dn~------~a--------R~~ln~~c~~~-~- 551 (1015)
T 3cmm_A 497 NPD-----LKGKINAKIDKVGPETEEI----FNDSFWESLDFVTNALDNV------DA--------RTYVDRRCVFY-R- 551 (1015)
T ss_dssp CGG-----GTTTEEEECCCCSGGGTTT----SCHHHHHHCSEEEECCSSH------HH--------HHHHHHHHHHH-T-
T ss_pred CCC-----CcceEEEEecccCchhhhh----ccHhhhccCCEEEECCCCH------HH--------HHHHHHHHHHc-C-
Confidence 431 1127888888887422110 1125567899999876542 11 12234455554 3
Q ss_pred eEEEEEecccccC
Q 008315 155 KVFVHVSTAYVAG 167 (570)
Q Consensus 155 k~fV~vSTa~v~~ 167 (570)
+.+|+.++....|
T Consensus 552 ~Pli~~g~~G~~G 564 (1015)
T 3cmm_A 552 KPLLESGTLGTKG 564 (1015)
T ss_dssp CCEEEEEEETTEE
T ss_pred CcEEEeCCCcccc
Confidence 4577777655444
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=82.14 E-value=5 Score=39.54 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=26.4
Q ss_pred CCccchhhhcCCCE-EEEECCccHhHHHHHHHHHHhCCC
Q 008315 1 MELGSVVEFLENKI-ILVSGVTGFVAKVFIEKILRVQPN 38 (570)
Q Consensus 1 ~~~~~i~~~~~~k~-VlITGaTGFlG~~Lve~Ll~~g~~ 38 (570)
|.++.+..+++.++ |+|.|+||-.|+.+++.|++.|++
T Consensus 1 ~~~~~l~~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~~ 39 (294)
T 2yv1_A 1 MVLRDKMILLDENTKAIVQGITGRQGSFHTKKMLECGTK 39 (294)
T ss_dssp ------CCSSCTTCCEEEETTTSHHHHHHHHHHHHTTCC
T ss_pred CChhHHHHHhCCCCEEEEECCCCCHHHHHHHHHHhCCCe
Confidence 44556677777654 677799999999999999987754
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=82.02 E-value=1.5 Score=42.98 Aligned_cols=37 Identities=27% Similarity=0.386 Sum_probs=31.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|+|+|+ |-+|+.++..|.+.|. .+|++..|+.
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~--~~v~v~~R~~ 160 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQP--ASITVTNRTF 160 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCC--SEEEEEESSH
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCC--CeEEEEECCH
Confidence 47899999997 7899999999998774 5778888864
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=81.88 E-value=1.2 Score=43.48 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=30.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|+|+|+ |.+|+.++..|++.| .+|++..|+.
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G---~~v~v~~R~~ 152 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTF 152 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCC---CEEEEEECCH
Confidence 46899999997 779999999999988 4678888864
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=81.54 E-value=1.3 Score=44.66 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=28.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|.+|||+|| |-+|...+..+...|. ++|++..|+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga--~~Vi~~~~~ 198 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGA--GPILVSDPN 198 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTC--CSEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 7899999999 9999999988877775 246777775
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=81.52 E-value=0.81 Score=39.92 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=34.4
Q ss_pred CCccchhhhc-CCCEEEEECCc---cHhHHHHHHHHHHhCCCccEEEEE
Q 008315 1 MELGSVVEFL-ENKIILVSGVT---GFVAKVFIEKILRVQPNVKKLYLL 45 (570)
Q Consensus 1 ~~~~~i~~~~-~~k~VlITGaT---GFlG~~Lve~Ll~~g~~V~~i~~l 45 (570)
|....+..+| +.++|.|.|+| |-+|..+++.|++.|++ ||..
T Consensus 1 m~~~~l~~ll~~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~---v~~v 46 (140)
T 1iuk_A 1 MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYR---VLPV 46 (140)
T ss_dssp CCHHHHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCE---EEEE
T ss_pred CCHHHHHHHHcCCCEEEEECCCCCCCChHHHHHHHHHHCCCE---EEEe
Confidence 4344688899 88999999999 88999999999998873 5553
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=81.49 E-value=2.3 Score=43.27 Aligned_cols=38 Identities=16% Similarity=0.077 Sum_probs=29.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.|.+|||+|+ |-+|...+..+...|. ++|++..++...
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga--~~Vi~~~~~~~~ 227 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINKDK 227 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGGG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEEcCCHHH
Confidence 5789999996 9999999988877774 356777766543
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=81.22 E-value=1.2 Score=48.02 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=27.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++++|||| |.+|++++..|++.|.. |++..|+.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~---V~i~~R~~ 397 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAK---VVIANRTY 397 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC----CEEEESSH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCE---EEEEECCH
Confidence 57899999998 79999999999999964 57778863
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=81.10 E-value=0.88 Score=46.36 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=27.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~ 49 (570)
.|.+|||+||+|-+|...+.-+... | .+|++..++.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g---~~Vi~~~~~~ 207 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTD---LTVIATASRP 207 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCC---SEEEEECSSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcC---CEEEEEeCCH
Confidence 5789999999999999888666543 4 4667777653
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=80.97 E-value=1.2 Score=45.24 Aligned_cols=34 Identities=26% Similarity=0.320 Sum_probs=27.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
++|.|.||||.+|+.+++.|++. +++ .|.++.|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~-ev~~i~~s 42 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMF-ELTALAAS 42 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSE-EEEEEEEC
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCC-EEEEEEcc
Confidence 58999999999999999988764 554 56677664
|
| >2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1 | Back alignment and structure |
|---|
Probab=80.92 E-value=4.2 Score=46.09 Aligned_cols=93 Identities=11% Similarity=0.138 Sum_probs=57.6
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHH----HHHHhh---hhhHHHHHhhhcccccccc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRF----QNEVLA---KDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl----~~~l~~---~~~f~~l~~~~~~~~~~~~ 83 (570)
++.+|+|.|+ |-+|..+++.|.+.| |.+|.++....-..+-..|- .+++-+ ...-++|++-.|
T Consensus 410 ~~~~vlvvG~-GglG~~~~~~L~~~G--vg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np------- 479 (805)
T 2nvu_B 410 DTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP------- 479 (805)
T ss_dssp HTCCEEEECC-SSHHHHHHHHHHTTT--CCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST-------
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcC--CCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCC-------
Confidence 7889999996 558999999999876 67888887654332222220 000000 012234555444
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
.-+|+.+..+++. .+ ..+++++|+||.|..
T Consensus 480 ~~~v~~~~~~~~~-------~~--~~~~~~~d~vv~~~d 509 (805)
T 2nvu_B 480 NCNVVPHFNKIQD-------FN--DTFYRQFHIIVCGLD 509 (805)
T ss_dssp TCEEEEEESCGGG-------SC--HHHHHTCSEEEECCS
T ss_pred CCEEEEEeccccc-------cH--HHHHhcCCEEEECCC
Confidence 2457777777763 23 256688999998843
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=80.86 E-value=2.7 Score=42.06 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=28.2
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+|+ |-+|...+..+...|. +|++..++.
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga---~Vi~~~~~~ 200 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGL---RVAAVDIDD 200 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 6899999997 7799999988877774 567777754
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=80.74 E-value=1.9 Score=45.54 Aligned_cols=73 Identities=18% Similarity=0.307 Sum_probs=48.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.|+|+|.|+ |-+|..|++.|.+.|++| .++-+.+ ...+++. ++ -.+..+
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v---~vId~d~---~~~~~~~-------------~~----------~~~~~i 51 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDI---TIVDKDG---DRLRELQ-------------DK----------YDLRVV 51 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEE---EEEESCH---HHHHHHH-------------HH----------SSCEEE
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCE---EEEECCH---HHHHHHH-------------Hh----------cCcEEE
Confidence 4589999995 999999999999888765 3444321 1112222 11 246889
Q ss_pred EccCCCCCCCCChhhhHHHH-hCCccEEEEc
Q 008315 91 AGDISSEDLGLKDSNLKEEL-WNELDVMVNS 120 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l-~~~vdiVih~ 120 (570)
.||-++ .+.++++ ++++|.++-+
T Consensus 52 ~Gd~~~-------~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 52 NGHASH-------PDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp ESCTTC-------HHHHHHHTTTTCSEEEEC
T ss_pred EEcCCC-------HHHHHhcCCCcCCEEEEE
Confidence 999994 4444443 6789998843
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=80.73 E-value=3.4 Score=42.16 Aligned_cols=36 Identities=8% Similarity=0.193 Sum_probs=28.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+| +|-+|...+..+...|. .+|+++.|++
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga--~~Vi~~~~~~ 230 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGA--ENVIVIAGSP 230 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCC--ceEEEEcCCH
Confidence 578999999 89999999987777662 3678888764
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=80.70 E-value=2.1 Score=43.57 Aligned_cols=36 Identities=8% Similarity=-0.043 Sum_probs=27.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+|+ |-+|...+..+...|. ++|+++.++.
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga--~~Vi~~~~~~ 225 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGA--SIIIAVDIVE 225 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTC--SEEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCC--CeEEEECCCH
Confidence 5789999995 9999999887777775 3566776653
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=80.42 E-value=0.93 Score=39.71 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=30.2
Q ss_pred chhhhcC-CCEEEEECCc---cHhHHHHHHHHHHhCCC
Q 008315 5 SVVEFLE-NKIILVSGVT---GFVAKVFIEKILRVQPN 38 (570)
Q Consensus 5 ~i~~~~~-~k~VlITGaT---GFlG~~Lve~Ll~~g~~ 38 (570)
.+..+|+ .++|.|.|+| |-+|..+++.|++.|++
T Consensus 14 ~l~~ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G~~ 51 (144)
T 2d59_A 14 DIREILTRYKKIALVGASPKPERDANIVMKYLLEHGYD 51 (144)
T ss_dssp HHHHHHHHCCEEEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred HHHHHHcCCCEEEEEccCCCCCchHHHHHHHHHHCCCE
Confidence 4778886 8999999998 89999999999998874
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=80.09 E-value=2.9 Score=42.27 Aligned_cols=36 Identities=11% Similarity=0.176 Sum_probs=28.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~ 49 (570)
-.|.+|||+|| |-+|...+.-+... |. +|++..++.
T Consensus 185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga---~Vi~~~~~~ 221 (359)
T 1h2b_A 185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPA---TVIALDVKE 221 (359)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCC---EEEEEESSH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCC---eEEEEeCCH
Confidence 36789999999 89999999877777 74 577877753
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=80.02 E-value=13 Score=37.00 Aligned_cols=107 Identities=16% Similarity=0.075 Sum_probs=61.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|.|+|| |.+|..++..|...|. + .|.+..+++.... ....++... +.. .+ ...++...
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~-~-~v~L~Di~~~~l~---~~~~~l~~~-----~~~-~~------~~~~i~~t- 64 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNL-G-DVVLFDIVKNMPH---GKALDTSHT-----NVM-AY------SNCKVSGS- 64 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTC-C-EEEEECSSSSHHH---HHHHHHHTH-----HHH-HT------CCCCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCC-C-eEEEEeCCHHHHH---HHHHHHHhh-----hhh-cC------CCcEEEEC-
Confidence 368999998 9999999999988775 2 3666666543221 111111111 000 00 01222221
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccC-----HHHHHHHHHHHHHHHHHHHHHc
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDER-----YDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~-----~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
.| . +.++++|+||-+++... .... -.+....|+.-.+.+.+...+.
T Consensus 65 ~d------------~--~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~ 116 (322)
T 1t2d_A 65 NT------------Y--DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 116 (322)
T ss_dssp CC------------G--GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CC------------H--HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 12 1 34589999999997643 2211 2334677888888888777665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 570 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 5e-09 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-08 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-08 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-07 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.004 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 0.004 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 56.0 bits (134), Expect = 5e-09
Identities = 51/352 (14%), Positives = 92/352 (26%), Gaps = 82/352 (23%)
Query: 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLK 72
K+ L++GVTG E +L V + + +TE +Q+
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNP------ 55
Query: 73 EKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDV 132
K GD+S D L+E +E+ + + + E +
Sbjct: 56 -------------KFHLHYGDLS--DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY 100
Query: 133 AFGINTLGAIHLVNFAKK--CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L+ + K F ST+ + G
Sbjct: 101 TADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL---------------------- 138
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE--N 248
+ PQKE T F + Y K I +E
Sbjct: 139 -----------VQEIPQKETTPFYPR------------SPYAVAKLYAYWITVNYRESYG 175
Query: 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLV-GETKTIMDVIPVDM 307
+ P G + I AQG CL G ++ D
Sbjct: 176 MYACNGILFNHES----PRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231
Query: 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
V + + Q + + + ++ ++ K
Sbjct: 232 YVKMQWMML-----QQEQPEDFVIATG--VQYSVRQFVEMAAAQLGIKLRFE 276
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.2 bits (129), Expect = 2e-08
Identities = 51/363 (14%), Positives = 95/363 (26%), Gaps = 74/363 (20%)
Query: 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLK 72
+ L++G+TG E +L V + + +T
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGR------------------I 43
Query: 73 EKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDV 132
E + I + GD++ D + E E+ + + + + +
Sbjct: 44 EHLYKNPQAHIEGNMKLHYGDLT--DSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY 101
Query: 133 AFGINTLGAIHLVNFAKKC--VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
++ +G + L++ K C + F ST+ + G+
Sbjct: 102 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK---------------------- 139
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ--QSKEN 248
+ PQKE T F + Y K I+ + N
Sbjct: 140 -----------VQEIPQKETTPFYPR------------SPYGAAKLYAYWIVVNFREAYN 176
Query: 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308
L V + K ++ +G D
Sbjct: 177 LFAVNGILFNHESPRRGA---NFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPIEVS 368
V AM ++ +P D I S L G + N+ G+ E
Sbjct: 234 VEAMW--LMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETG 291
Query: 369 KII 371
K+
Sbjct: 292 KVH 294
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 2e-08
Identities = 50/316 (15%), Positives = 95/316 (30%), Gaps = 89/316 (28%)
Query: 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLK 72
K IL++G GFV +K++ V
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEV--------------------------------- 28
Query: 73 EKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYD- 131
T +++F + + V I E+ L + ++ E L+ E+D + + A+
Sbjct: 29 ----TVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYN 84
Query: 132 --VAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAE 189
NT+G ++++ AK+ + ST+ V G+
Sbjct: 85 PIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYGD--------------------- 121
Query: 190 MKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ--QSKE 247
+ PQ E N G Y K + E + +E
Sbjct: 122 ------------PEVHPQSEDYWGHVNP-------IGPRACYDEGKRVAETMCYAYMKQE 162
Query: 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307
+ + + R G G V ++ + + QG + G V
Sbjct: 163 GVEVRVARIFNTFGPRMHMNDGRV-----VSNFILQALQGEPLTVYGSGSQTRAFQYVSD 217
Query: 308 VVNAMIVAMVAHAKQP 323
+VN ++ M ++ P
Sbjct: 218 LVNGLVALMNSNVSSP 233
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 51.3 bits (122), Expect = 2e-07
Identities = 52/368 (14%), Positives = 107/368 (29%), Gaps = 91/368 (24%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
IL++G GF+ + I+ K + D + A ++ L ++ +
Sbjct: 3 ILITGGAGFIGSAVVRHII------KNTQDTVVNIDKLTYAGNLES------LSDISESN 50
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNEL--DVMVNSAAITKFDERYD- 131
+ F DI DS ++ + D +++ AA + D
Sbjct: 51 -----------RYNFEHADIC-------DSAEITRIFEQYQPDAVMHLAAESHVDRSITG 92
Query: 132 --VAFGINTLGAIHLVNFAKKC--------VKLKVFVHVSTAYVAGERTGLILENPLDGA 181
N +G L+ A+K F H+ST V G+
Sbjct: 93 PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLP----------- 141
Query: 182 SGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241
D + L T AP + Y +K + +
Sbjct: 142 ---HPDEVENSVTLPLFTETTAYAPS---------------------SPYSASKASSDHL 177
Query: 242 MQQSKE--NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTI 299
++ + L ++ + G P + K I + + + +G + G+ I
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYG------PYHFPE-KLIPLVILNALEGKPLPIYGKGDQI 230
Query: 300 MDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWIN 359
D + V+ A+ + + + Y++G V + +
Sbjct: 231 RDWLYVEDHARALHMVV----TEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATS 286
Query: 360 KQGKPIEV 367
+ + V
Sbjct: 287 YREQITYV 294
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 47.5 bits (112), Expect = 2e-06
Identities = 50/320 (15%), Positives = 87/320 (27%), Gaps = 81/320 (25%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
+LV+G GF+ F+ ++L Y + A +EV+ D
Sbjct: 3 LLVTGGAGFIGSHFVRQLL------AGAYPDVPA-----------DEVIVLDSLT-YAGN 44
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAF 134
++ FV GDI L ++ + + + +I +
Sbjct: 45 RANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTET-- 102
Query: 135 GINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVID 194
N G L+ A + VHVST V G
Sbjct: 103 --NVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGS-------------------------- 133
Query: 195 QKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ--QSKENLSLV 252
E + N + Y +K +++ + L +
Sbjct: 134 -------IDSGSWTESSPLEPN------------SPYAASKAGSDLVARAYHRTYGLDVR 174
Query: 253 IIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312
I R G Y+ P K I G L G+ + + + D +
Sbjct: 175 ITRCCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227
Query: 313 IVAMVAHAKQPSDANIYHVG 332
+ + IYH+G
Sbjct: 228 ALVL----AGGRAGEIYHIG 243
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.9 bits (97), Expect = 1e-04
Identities = 53/359 (14%), Positives = 113/359 (31%), Gaps = 79/359 (22%)
Query: 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNV 70
+ K+ L++GV GF+ +E + L+ +V+ D F
Sbjct: 15 QPKVWLITGVAGFIGSNLLETL-----------------------LKLDQKVVGLDNFAT 51
Query: 71 LKEKWGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERY 130
++ + S +SEK I + L D N + + ++ +
Sbjct: 52 GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 111
Query: 131 DVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEM 190
+ N G ++++ A+ K++ F + +++ G+ GL
Sbjct: 112 ITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGL------------------ 152
Query: 191 KVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ--QSKEN 248
P+ E T+ + Y TK + E+
Sbjct: 153 ---------------PKVEDTIGK------------PLSPYAVTKYVNELYADVFSRCYG 185
Query: 249 LSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308
S + +R V G ++P + I + QG+ + G+ +T D ++
Sbjct: 186 FSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242
Query: 309 VNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPWINKQGKPIEV 367
V A ++A A + VG ++ D + ++ +P+
Sbjct: 243 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDG-----LAENGVSYHREPVYR 296
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 37.3 bits (85), Expect = 0.004
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 36/159 (22%)
Query: 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEK 74
+LV+G +G++ ++ L+ ++V+ D K
Sbjct: 3 VLVTGGSGYIGSHTCVQL-----------------------LQNGHDVIILDNLCNSKRS 39
Query: 75 WGTRLNSFISEKITFVAGDISSEDLGLKDSNLKEELWNEL--DVMVNSAAITKFDERYD- 131
+ + TFV GDI + L E+ ++ D +++ A + E
Sbjct: 40 VLPVIERLGGKHPTFVEGDIR-------NEALMTEILHDHAIDTVIHFAGLKAVGESVQK 92
Query: 132 --VAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168
+ N G + L++ + +K F+ S+A V G+
Sbjct: 93 PLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGD 130
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 36.7 bits (85), Expect = 0.004
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-------DERYDVAFGINT 138
F D+ E ++ +DV+VN+AAI + +N
Sbjct: 49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 108
Query: 139 LGAIHLVN-FAKKCVKLKVFVHVSTAYVAGER 169
+HL A++ K+ V+ A V G
Sbjct: 109 TAPMHLSALAAREMRKVGGGAIVNVASVQGLF 140
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 570 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.98 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.97 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.97 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.97 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.97 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.96 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.96 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.94 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.94 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.94 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.93 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.9 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.88 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.88 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.87 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.87 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.87 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.86 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.86 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.81 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.6 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.59 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.59 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.58 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.57 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.56 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.56 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.56 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.56 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.55 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.55 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.55 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.55 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.55 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.54 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.54 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.53 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.52 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.51 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.51 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.51 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.51 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.5 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.5 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.49 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.49 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.49 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.49 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.49 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.49 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.48 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.47 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.46 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.46 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.46 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.45 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.44 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.44 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.44 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.43 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.43 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.42 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.4 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.39 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.39 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.38 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.38 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.38 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.37 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.34 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.34 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.33 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.32 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.27 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.27 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.26 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.25 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.19 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.12 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.06 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.04 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.92 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.88 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.86 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.8 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.6 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.5 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.33 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.17 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.11 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 96.94 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.94 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 96.92 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 96.86 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.85 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.49 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.47 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.44 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.32 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.32 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.28 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.19 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.17 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.16 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.12 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.04 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.83 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 95.81 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.53 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.43 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.43 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.22 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 94.98 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 94.95 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 94.93 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 94.78 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 94.64 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 94.62 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 94.41 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 94.38 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.2 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 93.84 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 93.81 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 93.75 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 93.59 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 93.55 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 93.45 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 93.34 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 93.27 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 92.9 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 91.91 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 91.74 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 91.57 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 91.11 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 91.03 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 90.66 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 90.56 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 90.3 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 90.02 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 89.95 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 89.1 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 89.05 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 88.82 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 88.3 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 88.19 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 87.95 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.14 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 86.06 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 85.84 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 85.71 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.07 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 84.26 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 84.18 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 84.18 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 84.07 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 83.41 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 83.01 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 83.01 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 82.99 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 82.86 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 82.63 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 82.3 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 82.29 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 82.13 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 81.93 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 81.75 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 81.29 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 81.12 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 80.98 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 80.94 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 80.21 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 80.08 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-32 Score=284.09 Aligned_cols=261 Identities=16% Similarity=0.125 Sum_probs=189.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.|||||||||||++|+++|++.|++ |+++.|....... +++. .+.. +. ....++++++.|
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~---V~~~~r~~~~~~~-~~~~-~~~~---------~~-----~~~~~~~~~~~~ 62 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYE---VHGIKRRASSFNT-ERVD-HIYQ---------DP-----HTCNPKFHLHYG 62 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEECC-------------------------------------CCEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCE---EEEEECCCcccch-hhHH-HHHh---------hh-----hhcCCCeEEEEe
Confidence 78999999999999999999999975 4788885432211 1221 1111 00 112368999999
Q ss_pred cCCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHc--cCceEEEEEecccc
Q 008315 93 DISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKC--VKLKVFVHVSTAYV 165 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~--~~lk~fV~vSTa~v 165 (570)
|++ +.+..+.++++ +|+|||+||..+.. ++....+++|+.||.+|+++|++. ++.++|||+||+.+
T Consensus 63 Dl~-------d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v 135 (357)
T d1db3a_ 63 DLS-------DTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL 135 (357)
T ss_dssp CSS-------CHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG
T ss_pred ecC-------CHHHHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh
Confidence 999 44445577774 59999999986533 456778999999999999999986 34568999999999
Q ss_pred cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh
Q 008315 166 AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS 245 (570)
Q Consensus 166 ~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~ 245 (570)
||... +.+++|+++. .+.+.|+.||.++|.++..+
T Consensus 136 YG~~~----~~~~~E~~~~-----------------------------------------~P~~~Y~~sK~~~E~~~~~~ 170 (357)
T d1db3a_ 136 YGLVQ----EIPQKETTPF-----------------------------------------YPRSPYAVAKLYAYWITVNY 170 (357)
T ss_dssp GTTCC----SSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHH
T ss_pred hCCCC----CCCcCCCCCC-----------------------------------------CCCChHHHHHHHHHHHHHHH
Confidence 98643 2334443433 24578999999999999987
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCC-ceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNL-PCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~-~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
..+++++++||+.|||+...+. .........+.....|.. ....|+++..+|+++|+|+|++++.++..
T Consensus 171 ~~~~~l~~~ilR~~~vyGp~~~~~----~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~---- 242 (357)
T d1db3a_ 171 RESYGMYACNGILFNHESPRRGET----FVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ---- 242 (357)
T ss_dssp HHHHCCCEEEEEECCEECTTSCTT----SHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS----
T ss_pred HHHhCCCEEEEEeccccCCCCCcC----CCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhC----
Confidence 3489999999999999864321 111233445555556654 44568999999999999999999988742
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. .+++||++++ .++|+.|+++.+.+.++..
T Consensus 243 ~-~~~~yni~sg--~~~s~~~~~~~~~~~~g~~ 272 (357)
T d1db3a_ 243 E-QPEDFVIATG--VQYSVRQFVEMAAAQLGIK 272 (357)
T ss_dssp S-SCCCEEECCC--CCEEHHHHHHHHHHTTTEE
T ss_pred C-CCCeEEECCC--CceehHHHHHHHHHHhCCc
Confidence 1 2679999999 8999999999999998754
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.98 E-value=7.4e-31 Score=267.55 Aligned_cols=256 Identities=21% Similarity=0.251 Sum_probs=198.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCcc---EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVK---KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~---~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+|||||||||||++|+++|++.|++|. +++.+-+....... ..+. ......++.+
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~-~~~~--------------------~~~~~~~~~~ 59 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR-ANLA--------------------PVDADPRLRF 59 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG-GGGG--------------------GGTTCTTEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH-hHhh--------------------hhhcCCCeEE
Confidence 6899999999999999999999998765 34444332211110 0000 0011367999
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+.+ ..........+|+|+|+|+..... ......+++|+.||.+++++|.+. ++++|||+||+.+|
T Consensus 60 ~~~d~~~-------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~y 131 (322)
T d1r6da_ 60 VHGDIRD-------AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVY 131 (322)
T ss_dssp EECCTTC-------HHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGG
T ss_pred EEecccc-------chhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceee
Confidence 9999994 444557778999999999876443 455677899999999999999998 78999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+... +.+++|+.+. .+.+.|+.||..+|.++..+
T Consensus 132 g~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 166 (322)
T d1r6da_ 132 GSID----SGSWTESSPL-----------------------------------------EPNSPYAASKAGSDLVARAYH 166 (322)
T ss_dssp CCCS----SSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHHHH
Confidence 8753 3334443443 34578999999999999886
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+ + ..+..++..+..|..-.+.+++++.+|++||+|+|++++.++....
T Consensus 167 ~~~~~~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~---- 235 (322)
T d1r6da_ 167 RTYGLDVRITRCCNNYGPYQHP-----E--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---- 235 (322)
T ss_dssp HHHCCCEEEEEECEEECTTCCT-----T--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC----
T ss_pred HHhCCCEEEEEeeeEECcCCCc-----C--cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC----
Confidence 458999999999999986532 1 2345667777888776778999999999999999999999987432
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.+++||++++ +++++.|+++.+.+.++..
T Consensus 236 ~~~~~ni~~~--~~~s~~e~~~~i~~~~~~~ 264 (322)
T d1r6da_ 236 AGEIYHIGGG--LELTNRELTGILLDSLGAD 264 (322)
T ss_dssp TTCEEEECCC--CEEEHHHHHHHHHHHHTCC
T ss_pred CCCeeEEeec--ccchhHHHHHHHHHHhCCC
Confidence 3679999998 9999999999999998865
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.2e-31 Score=272.42 Aligned_cols=252 Identities=16% Similarity=0.166 Sum_probs=192.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|++| +++.|...+... .+. . .....++....+
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V---~~~d~~~~~~~~--~~~----~----------------~~~~~~~d~~~~ 56 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEV---TVVDNFFTGRKR--NVE----H----------------WIGHENFELINH 56 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCSSCCGG--GTG----G----------------GTTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEE---EEEeCCCcCCHH--HHH----H----------------hcCCCceEEEeh
Confidence 799999999999999999999999765 566653222110 000 0 001245677777
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
|+.+ .+..++|+|||+||.++. .......+++|+.|+.+++++|++. ++ +|||+||..||+..
T Consensus 57 ~~~~------------~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~ 122 (312)
T d2b69a1 57 DVVE------------PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDP 122 (312)
T ss_dssp CTTS------------CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSC
T ss_pred HHHH------------HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCC
Confidence 7653 233579999999998653 3456778999999999999999997 54 79999999999874
Q ss_pred C-CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--c
Q 008315 170 T-GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--K 246 (570)
Q Consensus 170 ~-g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~ 246 (570)
. +.+.|..+.+.++. .+.+.|+.||.++|.++..+ .
T Consensus 123 ~~~~~~e~~~~~~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~~ 161 (312)
T d2b69a1 123 EVHPQSEDYWGHVNPI-----------------------------------------GPRACYDEGKRVAETMCYAYMKQ 161 (312)
T ss_dssp SSSSBCTTCCCBCCSS-----------------------------------------STTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccccCCCCCC-----------------------------------------CCccHHHHHHHHHHHHHHHHHHH
Confidence 3 35566555443333 24578999999999999886 4
Q ss_pred CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 247 ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 247 ~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
.+++++++||+.|||+...+-. -..+..++..+..|....++++++..+|++||+|+|++++.++... ..
T Consensus 162 ~~~~~~~lR~~~vyGp~~~~~~-----~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-----~~ 231 (312)
T d2b69a1 162 EGVEVRVARIFNTFGPRMHMND-----GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-----VS 231 (312)
T ss_dssp HCCCEEEEEECCEECTTCCTTC-----CCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-----CC
T ss_pred hCCcEEEEEeeeEECCCCCCCC-----ccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-----cC
Confidence 5899999999999998654311 1234567777888887778899999999999999999998887421 25
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+||++++ .++++.++++.+.+.++..+
T Consensus 232 ~~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 259 (312)
T d2b69a1 232 SPVNLGNP--EEHTILEFAQLIKNLVGSGS 259 (312)
T ss_dssp SCEEESCC--CEEEHHHHHHHHHHHHTCCC
T ss_pred CceEecCC--cccchhhHHHHHHHHhCCCC
Confidence 68999998 99999999999999998765
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=3.4e-30 Score=264.59 Aligned_cols=266 Identities=17% Similarity=0.193 Sum_probs=203.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc-HHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES-AALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~-~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+.|+|||||||||||++|+++|++.|++ |+++.|...+.. ..+++. .+.. ....+++.+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~---V~~~d~~~~~~~~~~~~~~-~~~~----------------~~~~~~~~~ 74 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQK---VVGLDNFATGHQRNLDEVR-SLVS----------------EKQWSNFKF 74 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCSSCCHHHHHHHH-HHSC----------------HHHHTTEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCE---EEEEECCCCcchhhHHHHH-Hhhh----------------hcccCCeeE
Confidence 5689999999999999999999999975 467777444322 222222 1111 011367899
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+.+|+. +...........+.|+|+||.... .++....+++|+.||.+++++|.+. ++++|||+||+.+|
T Consensus 75 ~~~d~~-------d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vy 146 (341)
T d1sb8a_ 75 IQGDIR-------NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTY 146 (341)
T ss_dssp EECCTT-------SHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGG
T ss_pred Eeeccc-------cccccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceee
Confidence 999999 455555777889999999997653 3556778999999999999999998 78999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
|... +.++.|+.+. .+.+.|+.||.++|+++..+
T Consensus 147 g~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 181 (341)
T d1sb8a_ 147 GDHP----GLPKVEDTIG-----------------------------------------KPLSPYAVTKYVNELYADVFS 181 (341)
T ss_dssp TTCC----CSSBCTTCCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCC----CCCccCCCCC-----------------------------------------CCCCcchHHHHHHHHHHHHHH
Confidence 8753 2333333333 35688999999999999876
Q ss_pred -cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 -KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 -~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++|+||+.|||+...|-..+. ..+..++..+..|..-.+.++++..+|++||+|+|.++..++..... .
T Consensus 182 ~~~~i~~~ilR~~~v~G~~~~~~~~~~---~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~--~ 256 (341)
T d1sb8a_ 182 RCYGFSTIGLRYFNVFGRRQDPNGAYA---AVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD--A 256 (341)
T ss_dssp HHHCCCCEEEEECCEECTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--G
T ss_pred HHhCCCeEEEEeceeeccCcCCCCchh---hhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc--c
Confidence 45899999999999998776533221 12345566777788778889999999999999999999888753322 2
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+++||++++ +++|+.|+++.+.+.++...
T Consensus 257 ~~~~~~~~~~--~~~si~~i~~~i~~~~~~~~ 286 (341)
T d1sb8a_ 257 RNQVYNIAVG--GRTSLNQLFFALRDGLAENG 286 (341)
T ss_dssp CSEEEEESCS--CCEEHHHHHHHHHHHHHHTT
T ss_pred cceeeeeccc--ccchHHHHHHHHHHHhcccc
Confidence 3689999998 89999999999999888664
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=2.1e-30 Score=268.73 Aligned_cols=264 Identities=18% Similarity=0.223 Sum_probs=192.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|++.|++| |.++.+...... .+++. . .....+++++.+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~v--v~~~d~~~~~~~-~~~~~-~-------------------~~~~~~~~~~~~ 57 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDT--VVNIDKLTYAGN-LESLS-D-------------------ISESNRYNFEHA 57 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCE--EEEEECCCTTCC-GGGGT-T-------------------TTTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCE--EEEEeCCCcccc-HHHHH-h-------------------hhhcCCcEEEEc
Confidence 589999999999999999999999864 334433222111 11111 0 001367999999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHcc--------CceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCV--------KLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~--------~lk~fV~ 159 (570)
|+++ .+..+.+++ ++|+|||+||..... +.....+++|+.||.+++++|+++. ++++|||
T Consensus 58 Dl~d-------~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~ 130 (361)
T d1kewa_ 58 DICD-------SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130 (361)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEE
T ss_pred cCCC-------HHHHHHHHHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEE
Confidence 9995 433446555 589999999986532 3456679999999999999998762 4569999
Q ss_pred EecccccCCCCCe-eccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHH
Q 008315 160 VSTAYVAGERTGL-ILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMG 238 (570)
Q Consensus 160 vSTa~v~~~~~g~-i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~a 238 (570)
+||..+||..... ..|.... .+...+ . -...+.+.|+.||.++
T Consensus 131 ~SS~~vyg~~~~~~~~~~~~~--~~~~~e--------------------~--------------~~~~p~s~Yg~sK~~~ 174 (361)
T d1kewa_ 131 ISTDEVYGDLPHPDEVENSVT--LPLFTE--------------------T--------------TAYAPSSPYSASKASS 174 (361)
T ss_dssp EEEGGGGCCCCCGGGSCTTSC--CCCBCT--------------------T--------------SCCCCCSHHHHHHHHH
T ss_pred eccceeeCCCccCCccccccC--CCCccc--------------------C--------------CCCCCCCHHHHHHHHH
Confidence 9999999976422 1222111 111000 0 0014568899999999
Q ss_pred HHHHHHh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHH
Q 008315 239 EMIMQQS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 239 E~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
|.++..+ ..+++++++||+.|||+...+ + ..+..++..+..|....+++++++.+|+++|+|+|++++.++
T Consensus 175 E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-----~--~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~ 247 (361)
T d1kewa_ 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-----E--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV 247 (361)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEESTTCCT-----T--SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCceECcCCCc-----C--cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHH
Confidence 9999886 458999999999999976532 2 234567777888887778899999999999999999999998
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.... .+++||++++ +++++.|+++.+.+.++..
T Consensus 248 ~~~~----~~~~~Ni~s~--~~~s~~~~~~~i~~~~~~~ 280 (361)
T d1kewa_ 248 TEGK----AGETYNIGGH--NEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp HHCC----TTCEEEECCC--CEEEHHHHHHHHHHHHHHH
T ss_pred hcCC----CCCeEEECCC--CCcchHHHHhHhhhhcccc
Confidence 7432 2679999998 8999999999998876543
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.5e-29 Score=259.67 Aligned_cols=265 Identities=19% Similarity=0.245 Sum_probs=190.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc-cHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE-SAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~-~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+|||||||||||++|+++|+++|++| +++.|...+. ....... .....++.++.
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V---~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 56 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDV---IILDNLCNSKRSVLPVIE---------------------RLGGKHPTFVE 56 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCSSCCTTHHHHHH---------------------HHHTSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEE---EEEECCCCcchhhHHHHH---------------------hhcCCCCEEEE
Confidence 579999999999999999999999765 6777643322 1111111 00136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+|+++ .+.+..+++ ++|+|||+||..... +.....+++|+.||.++|++|++. ++++|||+||..++
T Consensus 57 ~Dl~d-------~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy 128 (338)
T d1udca_ 57 GDIRN-------EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVY 128 (338)
T ss_dssp CCTTC-------HHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecCC-------HHHHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEE
Confidence 99994 444556666 799999999986543 356688999999999999999998 89999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
+.... ....+..+. ..+.+.|+.+|..+|.++.++
T Consensus 129 ~~~~~----~~~~e~~~~----------------------------------------~~p~~~Y~~sK~~~e~~~~~~~ 164 (338)
T d1udca_ 129 GDQPK----IPYVESFPT----------------------------------------GTPQSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp CSCCS----SSBCTTSCC----------------------------------------CCCSSHHHHHHHHHHHHHHHHH
T ss_pred ccccc----ccccccccc----------------------------------------CCCcchHHHHHhhhhHHHHHHH
Confidence 76431 111111110 135789999999999999864
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhcC--CCceeec------CCCceeecchHHHHHHHHH
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQG--NLPCLVG------ETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~G--~~~~~~~------~~~~~~d~VpVDdva~aii 313 (570)
..+++++++||+.|||+...+.-|.... .+.....+.....+ ....+.| ++...+|+++|+|+|.++.
T Consensus 165 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~ 244 (338)
T d1udca_ 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHV 244 (338)
T ss_dssp HHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHH
T ss_pred hhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhcc
Confidence 3589999999999999876543322111 12223333333332 2223334 4678899999999999988
Q ss_pred HHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 314 VAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+....... ..+++||++++ +++|+.|+++.+.+.+|..+
T Consensus 245 ~~~~~~~~~-~~~~i~Ni~~~--~~~si~e~~~~i~~~~g~~~ 284 (338)
T d1udca_ 245 VAMEKLANK-PGVHIYNLGAG--VGNSVLDVVNAFSKACGKPV 284 (338)
T ss_dssp HHHHHHTTC-CEEEEEEESCS--SCEEHHHHHHHHHHHHTSCC
T ss_pred ccccccccc-cCcceeeecCC--CCCcHHHHHHHHHHHHCCCC
Confidence 877654332 23689999998 89999999999999988654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.2e-29 Score=260.45 Aligned_cols=270 Identities=19% Similarity=0.228 Sum_probs=199.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|+++|+ .+|+++.+.+..... + ...++++++.|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~--~~V~~ld~~~~~~~~-------~-------------------~~~~~~~~i~~ 52 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAISR-------F-------------------LNHPHFHFVEG 52 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGGGG-------G-------------------TTCTTEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCCcchhh-------h-------------------ccCCCeEEEEC
Confidence 5899999999999999999999884 256788765432211 0 01367999999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
|+++ ..+..+.+.+++|+|||+||..... .....++++|+.||.+++++|.+. +. +++++||+.+++..
T Consensus 53 Di~~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~~-~~~~~ss~~~~~~~ 124 (342)
T d2blla1 53 DISI------HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY-RK-RIIFPSTSEVYGMC 124 (342)
T ss_dssp CTTT------CSHHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEECCGGGGBTC
T ss_pred ccCC------hHHHHHHHHhCCCccccccccccccccccCCccccccccccccccccccccc-cc-cccccccccccccc
Confidence 9985 3344445677899999999987643 345577999999999999999997 44 56788999998865
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KE 247 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~ 247 (570)
.....+...+.. +.+ ....+.+.|+.||.++|+++..+ ..
T Consensus 125 ~~~~~~~~~~~~-~~~-------------------------------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 166 (342)
T d2blla1 125 SDKYFDEDHSNL-IVG-------------------------------------PVNKPRWIYSVSKQLLDRVIWAYGEKE 166 (342)
T ss_dssp CCSSBCTTTCCC-BCC-------------------------------------CTTCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccc-ccc-------------------------------------ccCCCcchhhhcccchhhhhhhhhccc
Confidence 422111111100 000 01134478999999999999887 45
Q ss_pred CCcEEEEeccccccCCCCCCCCcccc-ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCC
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVED-LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDA 326 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~-~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~ 326 (570)
+++++|+||+.++|+...+..+-... ......++..+..|....++++++..++++||+|+|+++..++..... ...+
T Consensus 167 ~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~g 245 (342)
T d2blla1 167 GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGN-RCDG 245 (342)
T ss_dssp CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-TTTT
T ss_pred CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccc-cCCC
Confidence 89999999999999876544332222 234566778888888888899999999999999999999999875432 2347
Q ss_pred ceEEeccCCCCcccHHhHHHHHhhhcccCCCC
Q 008315 327 NIYHVGSSLRNPVTLVSILDYGFVYFTKKPWI 358 (570)
Q Consensus 327 ~iyn~~s~~~~~it~~el~~~~~~~~~~~p~~ 358 (570)
++||++++ ++++|+.|+++.+.+.++..+..
T Consensus 246 ~~~Nig~~-~~~~t~~~l~~~i~~~~~~~~~~ 276 (342)
T d2blla1 246 EIINIGNP-ENEASIEELGEMLLASFEKHPLR 276 (342)
T ss_dssp EEEEECCT-TSEEEHHHHHHHHHHHHHTCTTG
T ss_pred eEEEEecc-cchhHHHHHHHHHHHHhCCCccc
Confidence 89999875 25789999999999998876533
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=2e-29 Score=261.05 Aligned_cols=258 Identities=16% Similarity=0.063 Sum_probs=195.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
++|+|||||||||||++|+++|+++|++| +++.|.+..... .......+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V---~~~d~~~~~~~~---------------------------~~~~~~~~~ 63 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYV---IASDWKKNEHMT---------------------------EDMFCDEFH 63 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEE---EEEESSCCSSSC---------------------------GGGTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEE---EEEeCCCccchh---------------------------hhcccCcEE
Confidence 57899999999999999999999999754 667665443211 012456788
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc----ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF----DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f----~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
.+|+.+ .++ ...+++++|+|||+|+.... ..........|+.||.+++++|++. ++++|||+||+.++
T Consensus 64 ~~D~~~------~~~-~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~ 135 (363)
T d2c5aa1 64 LVDLRV------MEN-CLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIY 135 (363)
T ss_dssp ECCTTS------HHH-HHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGS
T ss_pred Eeechh------HHH-HHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhh-Cccccccccccccc
Confidence 899984 334 44778899999999987765 4567778999999999999999998 89999999999999
Q ss_pred CCCCC-eeccccCC--CCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 167 GERTG-LILENPLD--GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 167 ~~~~g-~i~E~~~~--e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
+.... ..+|.... +.. ...+.+.|+.||.++|+++.
T Consensus 136 ~~~~~~~~~~~~~~~~e~~-----------------------------------------~~~p~~~Yg~sK~~~E~~~~ 174 (363)
T d2c5aa1 136 PEFKQLETTNVSLKESDAW-----------------------------------------PAEPQDAFGLEKLATEELCK 174 (363)
T ss_dssp CGGGSSSSSSCEECGGGGS-----------------------------------------SBCCSSHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccCC-----------------------------------------cCCCCCHHHHHHHHHHHHHH
Confidence 86432 22222110 000 11356789999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcC
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAK 321 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~ 321 (570)
.+ ..+++++++||+.|||+...+...+.. ............+......+++.+.+|+++++|+|.+++.++..
T Consensus 175 ~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~--- 249 (363)
T d2c5aa1 175 HYNKDFGIECRIGRFHNIYGPFGTWKGGREK--APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS--- 249 (363)
T ss_dssp HHHHHHCCEEEEEEECCEECTTSCCSSSCCC--HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS---
T ss_pred HHHHHhCCCEEEEEeeeEeccCCcccccccc--cccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhC---
Confidence 76 448999999999999987643322221 22333344455555567778999999999999999999888752
Q ss_pred CCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 322 QPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 322 ~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
. .+++||++++ .++++.|+++.+.+..++..
T Consensus 250 ~--~~~~~ni~~~--~~~s~~~l~~~i~~~~g~~~ 280 (363)
T d2c5aa1 250 D--FREPVNIGSD--EMVSMNEMAEMVLSFEEKKL 280 (363)
T ss_dssp S--CCSCEEECCC--CCEEHHHHHHHHHHTTTCCC
T ss_pred C--CCCeEEEecC--CcccHHHHHHHHHHHhCCCC
Confidence 2 2578999999 99999999999999888754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=6.7e-29 Score=255.62 Aligned_cols=270 Identities=19% Similarity=0.200 Sum_probs=193.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH-HHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA-ALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~-~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|.|||||||||||++|+++|+++|++| +++.|....... ..+.. .....+++++.
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V---~~~d~~~~~~~~~~~~~~---------------------~~~~~~v~~~~ 57 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDC---VVADNLSNSTYDSVARLE---------------------VLTKHHIPFYE 57 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCSSCCTHHHHHHH---------------------HHHTSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeE---EEEECCCCcchhHHHhHH---------------------hhcccCCeEEE
Confidence 689999999999999999999999754 566654333221 11111 01136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEeccccc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVA 166 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~ 166 (570)
+|+++ .+..+.+++ ++|+|||+||.... .+.......+|+.||.+++++|++. ++++||++||..+|
T Consensus 58 ~Dl~d-------~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vy 129 (347)
T d1z45a2 58 VDLCD-------RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVY 129 (347)
T ss_dssp CCTTC-------HHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGG
T ss_pred eecCC-------HHHHHHHHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeee
Confidence 99994 443445554 79999999998653 3455677899999999999999997 89999999999999
Q ss_pred CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-
Q 008315 167 GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS- 245 (570)
Q Consensus 167 ~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~- 245 (570)
|...+...+.+++|+.+. .+.+.|+.||.++|+++.++
T Consensus 130 g~~~~~~~~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~ 168 (347)
T d1z45a2 130 GDATRFPNMIPIPEECPL-----------------------------------------GPTNPYGHTKYAIENILNDLY 168 (347)
T ss_dssp CCGGGSTTCCSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCCccccccCC-----------------------------------------CCCChhHhHHHHHHHHHHHHH
Confidence 976544444444443332 35688999999999999876
Q ss_pred ---cCCCcEEEEeccccccCCCCCCCCccc--cccchHHHHHHHhcCCC--ceeecC------CCceeecchHHHHHHHH
Q 008315 246 ---KENLSLVIIRPTIVSGTYKEPFPGWVE--DLKTINALFVASAQGNL--PCLVGE------TKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 246 ---~~~lp~~IvRPsiV~g~~~~p~~gw~~--~~~~~~~~i~~~~~G~~--~~~~~~------~~~~~d~VpVDdva~ai 312 (570)
..+++++++||+.|||+...+.-|... ..+.....+.....|.. -.+.|+ +....|++++.+++.++
T Consensus 169 ~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~ 248 (347)
T d1z45a2 169 NSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGH 248 (347)
T ss_dssp HHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHH
T ss_pred HhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccc
Confidence 457999999999999986644333211 11233344444443322 223333 45678899999999999
Q ss_pred HHHHHHhcCC---CCCCceEEeccCCCCcccHHhHHHHHhhhcccCCC
Q 008315 313 IVAMVAHAKQ---PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKPW 357 (570)
Q Consensus 313 i~a~~~~~~~---~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p~ 357 (570)
+.++...... ...+++||++++ +++|+.|+++.+.+.++....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~Ni~~~--~~~s~~e~~~~i~~~~~~~~~ 294 (347)
T d1z45a2 249 IAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGIDLP 294 (347)
T ss_dssp HHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTCCCC
T ss_pred cccccccccccccccccccceecCC--CcccHHHHHHHHHHHHCCCCc
Confidence 8887654321 223579999998 899999999999999887643
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.97 E-value=1.7e-28 Score=252.50 Aligned_cols=266 Identities=22% Similarity=0.275 Sum_probs=195.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|++.|++|. ++++.+...... ..+ .......+++++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~-v~~~d~~~~~~~-~~~---------------------~~~~~~~~i~~~~ 58 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVH-VTVLDKLTYAGN-KAN---------------------LEAILGDRVELVV 58 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCE-EEEEECCCTTCC-GGG---------------------TGGGCSSSEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeE-EEEEeCCCcccc-HHH---------------------HHHhhcCCeEEEE
Confidence 48999999999999999999999999874 333332211111 001 0112246899999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~ 168 (570)
+|+. +.+....+++..+.|+|+|+..... .+..+.+++|+.||.++++.|.+. + .++|++||+.+||.
T Consensus 59 ~Di~-------d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~ 129 (346)
T d1oc2a_ 59 GDIA-------DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGD 129 (346)
T ss_dssp CCTT-------CHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCC
T ss_pred ccCC-------CHHHHHHHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecc
Confidence 9998 5565678899999999999987643 345677899999999999999987 4 57999999999986
Q ss_pred CCCeeccc-cCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 169 RTGLILEN-PLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 169 ~~g~i~E~-~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
.. ..|. +.....+... .++. ....+.+.|+.||.++|.++..+
T Consensus 130 ~~--~~~~~~~~~~~~~~~------------------~~e~--------------~~~~p~s~Y~~sK~~~E~~~~~~~~ 175 (346)
T d1oc2a_ 130 LP--LREDLPGHGEGPGEK------------------FTAE--------------TNYNPSSPYSSTKAASDLIVKAWVR 175 (346)
T ss_dssp BC--CGGGSTTTTCSTTSS------------------BCTT--------------SCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred cC--ccccccccccCcccc------------------cccC--------------CCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 32 2222 1111111000 0000 01145688999999999999876
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSD 325 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~ 325 (570)
..+++++|+||++|||+...+- .....++.....|....+.++++..+++++++|+|++++.++.... .
T Consensus 176 ~~~i~~~ilR~~~vyGp~~~~~-------~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~----~ 244 (346)
T d1oc2a_ 176 SFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR----M 244 (346)
T ss_dssp HHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC----T
T ss_pred HcCCCEEEEeecceeCCCCCcc-------chhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc----c
Confidence 4589999999999999765321 2233555666677777888999999999999999999988776332 3
Q ss_pred CceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 326 ANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 326 ~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++||++++ ++.++.++++.+.+.++...
T Consensus 245 ~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~ 273 (346)
T d1oc2a_ 245 GETYLIGAD--GEKNNKEVLELILEKMGQPK 273 (346)
T ss_dssp TCEEEECCS--CEEEHHHHHHHHHHHTTCCT
T ss_pred Ccccccccc--ccccchHHHHHHHHHhCCCC
Confidence 679999998 89999999999999988753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=3.6e-29 Score=257.32 Aligned_cols=287 Identities=16% Similarity=0.153 Sum_probs=194.2
Q ss_pred CCccchhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 1 MELGSVVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 1 ~~~~~i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
||+..+++ ||+|||||||||||++|+++|+++|++| ++++|+.... +.++. +....
T Consensus 3 ~~~~~~~~---gk~VlVTG~sGfIGs~l~~~Ll~~G~~V---~~~vR~~~~~---~~~~~----------~~~~~----- 58 (342)
T d1y1pa1 3 IDNAVLPE---GSLVLVTGANGFVASHVVEQLLEHGYKV---RGTARSASKL---ANLQK----------RWDAK----- 58 (342)
T ss_dssp STTCSSCT---TCEEEEETTTSHHHHHHHHHHHHTTCEE---EEEESSHHHH---HHHHH----------HHHHH-----
T ss_pred CCCCCCCC---cCEEEEECCCCHHHHHHHHHHHHCcCEE---EEEeCCchhH---HHHHH----------hhhcc-----
Confidence 45555554 9999999999999999999999999754 6889965322 22210 00000
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
........+.+|+.++ .. ...++.++|+|+|+|+...+.......+..|+.||.+++++|.+.+++++|||+
T Consensus 59 -~~~~~~~~~~~Dl~~~------~~-~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~ 130 (342)
T d1y1pa1 59 -YPGRFETAVVEDMLKQ------GA-YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130 (342)
T ss_dssp -STTTEEEEECSCTTST------TT-TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred -ccccccEEEeccccch------hh-hhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccc
Confidence 0113345688999953 33 346778999999999999988888888999999999999999998789999999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||..+.+...... +..+.+....+.+....... ..|. ...++.+.|+.||..+|+
T Consensus 131 SS~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~----------~~e~--------------~~~~p~~~Y~~sK~~~E~ 185 (342)
T d1y1pa1 131 SSTVSALIPKPNV-EGIYLDEKSWNLESIDKAKT----------LPES--------------DPQKSLWVYAASKTEAEL 185 (342)
T ss_dssp CCGGGTCCCCTTC-CCCEECTTCCCHHHHHHHHH----------SCTT--------------STTHHHHHHHHHHHHHHH
T ss_pred ccceeeccCCCCC-CCcccccccccccccccccc----------cccc--------------CCCCCcCcccchhHhHHH
Confidence 9987654321111 11111112222221110000 0000 011234679999999999
Q ss_pred HHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHH
Q 008315 241 IMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 241 ~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
+++.+ ..++.++++||+.|+|+...|.. .......++..+..|...... .++...++++|+|+|.+++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l 260 (342)
T d1y1pa1 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPET----QSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVDIGLLHLGCL 260 (342)
T ss_dssp HHHHHHHHHCCSSEEEEEEESEEECCCSCTTT----CCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHHHHHHHHHHH
T ss_pred HHHHhhhhcccccccceecccceeCCCCCccc----cccchHHHHHHHHcCCcCccc-CCccceeeeeHHHHHHHHHHhh
Confidence 88766 34688999999999997654322 112345666677777644332 3455679999999999999888
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
.... . ...|+++++ +++|+.|+++.+.+.+...
T Consensus 261 ~~~~---~-~g~~~~~~~--~~~t~~eia~~i~k~~p~~ 293 (342)
T d1y1pa1 261 VLPQ---I-ERRRVYGTA--GTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HCTT---C-CSCEEEECC--EEECHHHHHHHHHHHCTTS
T ss_pred cCcc---c-cceEEEEcC--CceEHHHHHHHHHHHcCCC
Confidence 6322 1 344667777 8999999999999887544
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=3e-28 Score=247.30 Aligned_cols=256 Identities=16% Similarity=0.124 Sum_probs=192.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|++.|+++|++ |+++.|...... .+++.. + ...++++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~---V~~~~r~~~~~~-~~~l~~-~-------------------~~~~~~~~~~~ 56 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYR---VHGLVARRSSDT-RWRLRE-L-------------------GIEGDIQYEDG 56 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCC-CHHHHH-T-------------------TCGGGEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCE---EEEEECCCCccc-HHHHHH-h-------------------cccCCcEEEEc
Confidence 78999999999999999999999975 478888654332 233331 1 11357899999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+....... ..++++|+|+..... ++....++.|+.||.+++++|++.+..++|+++||+.+++
T Consensus 57 Dl~d-------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~ 129 (321)
T d1rpna_ 57 DMAD-------ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 129 (321)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred cccC-------hHHhhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC
Confidence 9995 333334433 477999998876543 4567889999999999999999986667899999999987
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-- 245 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-- 245 (570)
... +..++|+++. .+.+.|+.||.++|+++..+
T Consensus 130 ~~~----~~~~~E~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~~~~~ 164 (321)
T d1rpna_ 130 LIQ----AERQDENTPF-----------------------------------------YPRSPYGVAKLYGHWITVNYRE 164 (321)
T ss_dssp SCS----SSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred ccc----CCCCCCCCCc-----------------------------------------cccChhHHHHHHHHHHHHHHHh
Confidence 653 2223333333 35688999999999999887
Q ss_pred cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCC-CceeecCCCceeecchHHHHHHHHHHHHHHhcCCCC
Q 008315 246 KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGN-LPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPS 324 (570)
Q Consensus 246 ~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~-~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~ 324 (570)
..+++++++||+.|||+...+ .+. .+.+..++.....|. .....+++++.+|++||+|+|++++.++...
T Consensus 165 ~~~~~~~~lr~~~vyGp~~~~--~~~--~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~----- 235 (321)
T d1rpna_ 165 SFGLHASSGILFNHESPLRGI--EFV--TRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD----- 235 (321)
T ss_dssp HHCCCEEEEEECCEECTTSCT--TSH--HHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS-----
T ss_pred hcCCcEEEEEEecccCCCccc--ccc--HHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC-----
Confidence 468999999999999986421 111 123344555656654 4456799999999999999999999988632
Q ss_pred CCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 325 DANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 325 ~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
...+||++++ ++.++.++++.+.+.++..
T Consensus 236 ~~~~~ni~~~--~~~s~~~~~~~~~~~~~~~ 264 (321)
T d1rpna_ 236 KADDYVVATG--VTTTVRDMCQIAFEHVGLD 264 (321)
T ss_dssp SCCCEEECCS--CEEEHHHHHHHHHHTTTCC
T ss_pred CcCCceeccc--ccceehhhhHHHHHHhCCC
Confidence 1467999998 8999999999999988764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.8e-28 Score=249.35 Aligned_cols=263 Identities=15% Similarity=0.141 Sum_probs=187.5
Q ss_pred CEE-EEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 13 KII-LVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 13 k~V-lITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
|+| ||||||||||++|+++|+++|++ |++++|....... .++. ++ +.. .......+++++.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~---V~~i~r~~~~~~~-~~~~-~~-----~~~--------~~~~~~~~~~~~~ 62 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYE---VHGIVRRSSSFNT-GRIE-HL-----YKN--------PQAHIEGNMKLHY 62 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTG-GG-----C-----------------CEEEEE
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCE---EEEEECCCcccch-hhHH-HH-----hhc--------hhhhccCCcEEEE
Confidence 577 99999999999999999999975 5788885432111 0110 00 000 0011236789999
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHcc--CceEEEEEeccc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCV--KLKVFVHVSTAY 164 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~--~lk~fV~vSTa~ 164 (570)
+|+++ .+....+++ ++++|+|+||..... ++....+++|+.||.+++++|+++. +.++|||+||+.
T Consensus 63 ~Dl~d-------~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~ 135 (347)
T d1t2aa_ 63 GDLTD-------STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE 135 (347)
T ss_dssp CCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG
T ss_pred eecCC-------chhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh
Confidence 99994 444446654 578999999976543 4556678999999999999999873 446899999999
Q ss_pred ccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHH
Q 008315 165 VAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQ 244 (570)
Q Consensus 165 v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~ 244 (570)
|||... +.+++|+++. .+.+.|+.||.+||+++..
T Consensus 136 vyg~~~----~~~~~E~~~~-----------------------------------------~P~~~Yg~sK~~aE~~~~~ 170 (347)
T d1t2aa_ 136 LYGKVQ----EIPQKETTPF-----------------------------------------YPRSPYGAAKLYAYWIVVN 170 (347)
T ss_dssp GTCSCS----SSSBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH
T ss_pred eecCCC----CCCCCCCCCC-----------------------------------------CCCCHHHHHHHHHHHHHHH
Confidence 998643 3345544443 3457899999999999987
Q ss_pred h--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCC
Q 008315 245 S--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQ 322 (570)
Q Consensus 245 ~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~ 322 (570)
+ ..+++++++||+.|||+...+.. ... .....++.....+......++++..+++++|+|+|++++.++....
T Consensus 171 ~~~~~~~~~~ilr~~~vyGp~~~~~~--~~~-~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~-- 245 (347)
T d1t2aa_ 171 FREAYNLFAVNGILFNHESPRRGANF--VTR-KISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE-- 245 (347)
T ss_dssp HHHHHCCEEEEEEECCEECTTSCTTS--HHH-HHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS--
T ss_pred HHHHhCCCEEEEEecceeCCCCCCCc--ccc-ccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcCC--
Confidence 6 45899999999999998653211 111 1122233333444555777999999999999999999999987322
Q ss_pred CCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 323 PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 323 ~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
...|+++.. ...++.+..+......++.
T Consensus 246 ---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 273 (347)
T d1t2aa_ 246 ---PEDFVIATG--EVHSVREFVEKSFLHIGKT 273 (347)
T ss_dssp ---CCCEEECCS--CCEEHHHHHHHHHHHTTCC
T ss_pred ---Cccceeccc--cccccchhhhhhhhhhcce
Confidence 356888887 8899999999888887764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=4e-28 Score=253.93 Aligned_cols=282 Identities=16% Similarity=0.110 Sum_probs=188.7
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC-----------CcccHHHHHHHHHhhhhhHHHHHhhhccccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA-----------DTESAALRFQNEVLAKDLFNVLKEKWGTRLN 80 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~-----------~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~ 80 (570)
||+|||||||||||++|+++|++.|++|..+-.|.|.. ......+++. ++...
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~------ 64 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS----------RWKAL------ 64 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHH----------HHHHH------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHH----------HHHhh------
Confidence 79999999999999999999999998763221122211 1111112111 11111
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc------cCHHHHHHHHHHHHHHHHHHHHHcc
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD------ERYDVAFGINTLGAIHLVNFAKKCV 152 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~------~~~~~~~~~Nv~gt~~ll~~a~~~~ 152 (570)
...+++++.||++ +.+.++.+++ ++|+|||+||..... +.....+.+|+.||.+++++|++..
T Consensus 65 --~~~~i~~~~~Dl~-------d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~ 135 (393)
T d1i24a_ 65 --TGKSIELYVGDIC-------DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG 135 (393)
T ss_dssp --HCCCCEEEESCTT-------SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --cCCCcEEEEccCC-------CHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc
Confidence 1367899999999 4555567776 469999999976542 2234568999999999999999985
Q ss_pred CceEEEEEecccccCCCCCeeccccCC--CCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLD--GASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~--e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
..+.|++.||..+++.......|.... ++...+ +......+.+.
T Consensus 136 ~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~p~~~ 181 (393)
T d1i24a_ 136 EECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTD----------------------------------TLPYPKQASSF 181 (393)
T ss_dssp TTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEE----------------------------------EEECCCCCCSH
T ss_pred cccceeecccccccccccccccccccccccccccc----------------------------------ccccccccccH
Confidence 556788999988887654333332211 000000 00001135678
Q ss_pred HHHHHHHHHHHHHHh--cCCCcEEEEeccccccCCCCCCCC--c----cc--cc--cchHHHHHHHhcCCCceeecCCCc
Q 008315 231 YVFTKTMGEMIMQQS--KENLSLVIIRPTIVSGTYKEPFPG--W----VE--DL--KTINALFVASAQGNLPCLVGETKT 298 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~~g--w----~~--~~--~~~~~~i~~~~~G~~~~~~~~~~~ 298 (570)
|+.||.++|.++..+ ..+++++++||+.|||+...+... . .+ .. .....++.....|....++|++.+
T Consensus 182 Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~ 261 (393)
T d1i24a_ 182 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQ 261 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCC
T ss_pred HHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeeccc
Confidence 999999999999876 568999999999999987643210 0 00 00 123456667788888788899999
Q ss_pred eeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 299 IMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 299 ~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
.+|++||+|+|++++.++..... ...|++.++..+++++.++++.+.+..+..+
T Consensus 262 ~rd~v~v~D~~~a~~~~~~~~~~----~g~~~~~~~~~~~~si~el~~~i~~~~~~~~ 315 (393)
T d1i24a_ 262 TRGYLDIRDTVQCVEIAIANPAK----AGEFRVFNQFTEQFSVNELASLVTKAGSKLG 315 (393)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCC----TTCEEEEEECSEEEEHHHHHHHHHHHHHTTT
T ss_pred ccccccccchHHHHHHHHHhhcc----cceeeeecCCCCeeEHHHHHHHHHHHHHhhC
Confidence 99999999999999999873321 2233332211268999999999988765543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.5e-27 Score=242.35 Aligned_cols=265 Identities=17% Similarity=0.193 Sum_probs=188.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC-------cccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD-------TESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~-------~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
|+|||||||||||++|+++|++.|++| +++.|... .....+++. . ....
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V---~~ld~~~~~~~~~~~~~~~~~~~~-------------~--------~~~~ 58 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLP---VVIDNFHNAFRGGGSLPESLRRVQ-------------E--------LTGR 58 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCE---EEEECSSSSCBCSSSSBHHHHHHH-------------H--------HHTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEE---EEEECCCccccccccchHHHHHHH-------------H--------hcCC
Confidence 789999999999999999999999866 56654211 112222222 0 1136
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
++.++.+|+++ .+.++.+.. ++++|+|+||..... ..+...+++|+.||.+++++|++. ++++|+|+
T Consensus 59 ~~~~~~~Dl~d-------~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ 130 (346)
T d1ek6a_ 59 SVEFEEMDILD-------QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFS 130 (346)
T ss_dssp CCEEEECCTTC-------HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred CcEEEEeeccc-------cccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Cccccccc
Confidence 78999999994 444445544 577899999986533 345677999999999999999998 89999999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||+.+++.......+...+ ...+.++|+.+|..+|+
T Consensus 131 ss~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~Y~~~k~~~e~ 166 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEAHP--------------------------------------------TGGCTNPYGKSKFFIEE 166 (346)
T ss_dssp EEGGGGCSCSSSSBCTTSC--------------------------------------------CCCCSSHHHHHHHHHHH
T ss_pred ccceeeecccccccccccc--------------------------------------------ccccCChHHHHHHHHHH
Confidence 9999998753211111110 01356789999999999
Q ss_pred HHHHh---cCCCcEEEEeccccccCCCCCCCCccc--cccchHHHHHHH--hcCCCceee------cCCCceeecchHHH
Q 008315 241 IMQQS---KENLSLVIIRPTIVSGTYKEPFPGWVE--DLKTINALFVAS--AQGNLPCLV------GETKTIMDVIPVDM 307 (570)
Q Consensus 241 ~v~~~---~~~lp~~IvRPsiV~g~~~~p~~gw~~--~~~~~~~~i~~~--~~G~~~~~~------~~~~~~~d~VpVDd 307 (570)
.+.++ ..+++.+++||+.+||+.....-|... ........+... +++..-.+. .++.+.+|++||+|
T Consensus 167 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D 246 (346)
T d1ek6a_ 167 MIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVD 246 (346)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEe
Confidence 98875 458999999999999987643322211 112223333333 333332332 34667899999999
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+|+++..++...... ..+++||++++ +++++.|+++.+.+.++..+
T Consensus 247 ~a~~~~~~~~~~~~~-~~~~i~Ni~~~--~~~s~~dl~~~i~~~~~~~~ 292 (346)
T d1ek6a_ 247 LAKGHIAALRKLKEQ-CGCRIYNLGTG--TGYSVLQMVQAMEKASGKKI 292 (346)
T ss_dssp HHHHHHHHHHHHTTT-CCEEEEEECCS--CCEEHHHHHHHHHHHHCSCC
T ss_pred ccchhhhhccccccc-cCceEEEeCCC--CcccHHHHHHHHHHHhCCCC
Confidence 999998887654332 23689999998 89999999999999998764
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.96 E-value=1.7e-27 Score=248.32 Aligned_cols=285 Identities=14% Similarity=0.159 Sum_probs=190.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEE---ecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLI---RAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lv---R~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
++|+|||||||||||++|+++||++ |++| +++. |+.......+... ++. ..+.. ............
T Consensus 1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V---~~~D~l~~~~~~~~~~~~~~-~~~-----~~~~~-~~~~~~~~~~~~ 70 (383)
T d1gy8a_ 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSV---VIVDSLVGTHGKSDHVETRE-NVA-----RKLQQ-SDGPKPPWADRY 70 (383)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCCCEE---EEEECCTTTTTCCTTSCCHH-HHH-----HHHHH-SCSSCCTTTTCC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHhCCCEE---EEEecCCcccccchhhhhhh-hHH-----HHhhh-hccccccccccc
Confidence 3689999999999999999999974 6544 5553 3332221111111 000 00111 111111222356
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
+.++.||+++ .+.++.+++ .+|+|||+||..... +.....+++|+.||.+++++|++. ++++++++
T Consensus 71 ~~~~~~Di~d-------~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~ 142 (383)
T d1gy8a_ 71 AALEVGDVRN-------EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFS 142 (383)
T ss_dssp CEEEESCTTC-------HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEE
T ss_pred eEEEECcccC-------HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCcccccc
Confidence 8899999994 444455553 689999999987654 345677899999999999999997 88999999
Q ss_pred ecccccCCCCC---eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 161 STAYVAGERTG---LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 161 STa~v~~~~~g---~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
||..+++.... ..++.++.++++. .+.+.|+.||..
T Consensus 143 ~s~~~~~~~~~~~~~~~~~~~~e~~~~-----------------------------------------~p~~~Y~~sK~~ 181 (383)
T d1gy8a_ 143 SSAAIFGNPTMGSVSTNAEPIDINAKK-----------------------------------------SPESPYGESKLI 181 (383)
T ss_dssp EEGGGTBSCCC-----CCCCBCTTSCC-----------------------------------------BCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCC-----------------------------------------CCCCHHHhhHhH
Confidence 99998876431 1222333332222 356889999999
Q ss_pred HHHHHHHh--cCCCcEEEEeccccccCCCCCC-CCccccccchHHHH-H----HHhc------------CCCceee----
Q 008315 238 GEMIMQQS--KENLSLVIIRPTIVSGTYKEPF-PGWVEDLKTINALF-V----ASAQ------------GNLPCLV---- 293 (570)
Q Consensus 238 aE~~v~~~--~~~lp~~IvRPsiV~g~~~~p~-~gw~~~~~~~~~~i-~----~~~~------------G~~~~~~---- 293 (570)
+|+++..+ ..+++++++||+.|||+...+. ..+........+.+ . .... +....+.
T Consensus 182 ~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 261 (383)
T d1gy8a_ 182 AERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDY 261 (383)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCS
T ss_pred HHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCcc
Confidence 99999987 4689999999999999887542 22332222222211 1 1111 1111222
Q ss_pred --cCCCceeecchHHHHHHHHHHHHHHhcCC-----CCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 294 --GETKTIMDVIPVDMVVNAMIVAMVAHAKQ-----PSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 294 --~~~~~~~d~VpVDdva~aii~a~~~~~~~-----~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++.+.+|++||+|+|++++.++...... ...+++||++++ +++++.|+++.+.+.++..+
T Consensus 262 ~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~~~~ 329 (383)
T d1gy8a_ 262 PTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTGHPI 329 (383)
T ss_dssp SSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHCCCC
T ss_pred ccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC--CceeHHHHHHHHHHHhCCCC
Confidence 35778899999999999999988754321 123579999998 89999999999999988654
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=3e-26 Score=234.11 Aligned_cols=261 Identities=16% Similarity=0.146 Sum_probs=184.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|++||||||||||++|++.|+++|++ |+++.|..+.... +++. .+.. . ........+.++.+
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~---V~~~~r~~~~~~~-~~~~-~~~~---------~----~~~~~~~~~~~~~~ 63 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYE---VHGLIRRSSNFNT-QRIN-HIYI---------D----PHNVNKALMKLHYA 63 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEECCCSSCCC-TTTT-TTC---------------------CCEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCE---EEEEECCCcccch-hhhh-hhhh---------h----hhhccccceEEEEc
Confidence 79999999999999999999999975 4788986542111 0100 0000 0 00011256889999
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHcc----CceEEEEEecc
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCV----KLKVFVHVSTA 163 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~----~lk~fV~vSTa 163 (570)
|+++ .+.....++ ++|+|||+||..... +.....+..|+.|+.+++++|+++. ...++++.||+
T Consensus 64 Di~~-------~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~ 136 (339)
T d1n7ha_ 64 DLTD-------ASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS 136 (339)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred cccC-------HHHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccc
Confidence 9994 333345443 679999999987654 4566778999999999999998652 34578999999
Q ss_pred cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 164 YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 164 ~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
++++.....++| +.+. .+.+.|+.||..+|+++.
T Consensus 137 ~~~~~~~~~~~E-----~~~~-----------------------------------------~p~~~Y~~sK~~~E~~~~ 170 (339)
T d1n7ha_ 137 EMFGSTPPPQSE-----TTPF-----------------------------------------HPRSPYAASKCAAHWYTV 170 (339)
T ss_dssp GGGTTSCSSBCT-----TSCC-----------------------------------------CCCSHHHHHHHHHHHHHH
T ss_pred eecccCCCCCCC-----CCCC-----------------------------------------CCcchhhHHHHHHHHHHH
Confidence 998876543433 3333 346889999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcC-CCceeecCCCceeecchHHHHHHHHHHHHHHhc
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQG-NLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHA 320 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G-~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~ 320 (570)
.+ ..+++++++||+.|||+...+ ++.. ..+...+.....| ....+.+++.+.+|+++|+|+|+++..++...
T Consensus 171 ~~~~~~~~~~~ilR~~~vyGp~~~~--~~~~--~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~- 245 (339)
T d1n7ha_ 171 NYREAYGLFACNGILFNHESPRRGE--NFVT--RKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE- 245 (339)
T ss_dssp HHHHHHCCEEEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS-
T ss_pred HHHHHhCCCEEEEEEccccCCCCCC--CCCc--chhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC-
Confidence 76 458999999999999986421 1111 1222233333333 34456789999999999999999999888632
Q ss_pred CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccC
Q 008315 321 KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKK 355 (570)
Q Consensus 321 ~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~ 355 (570)
. ...++++.+ .+.++.++++.+.+.++..
T Consensus 246 --~--~~~~~~~~~--~~~s~~~~~~~~~~~~~~~ 274 (339)
T d1n7ha_ 246 --K--PDDYVVATE--EGHTVEEFLDVSFGYLGLN 274 (339)
T ss_dssp --S--CCEEEECCS--CEEEHHHHHHHHHHHTTCC
T ss_pred --C--CCccccccc--cccccchhhhhhhhhhhcc
Confidence 1 345666666 7899999999999988765
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=3.7e-26 Score=231.23 Aligned_cols=249 Identities=13% Similarity=0.087 Sum_probs=178.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|++.|+.| .+ .+..+ +
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~v---i~-~~~~~-----------------------------------~----- 37 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVE---LV-LRTRD-----------------------------------E----- 37 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEE---EE-CCCTT-----------------------------------T-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEE---EE-ecCch-----------------------------------h-----
Confidence 4799999999999999999999998654 22 22111 1
Q ss_pred ccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc----cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccc
Q 008315 92 GDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD----ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYV 165 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~----~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v 165 (570)
.|+. +.+....+++ .+|.|||+|+.+... .+..+.+++|+.||.+++++|++. ++++|||+||..+
T Consensus 38 ~~~~-------~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~v 109 (315)
T d1e6ua_ 38 LNLL-------DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCI 109 (315)
T ss_dssp CCTT-------CHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGG
T ss_pred cccc-------CHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceE
Confidence 2444 2232334433 589999999886542 455667899999999999999998 8999999999999
Q ss_pred cCCCCC-eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC-chHHHHHHHHHHHHH
Q 008315 166 AGERTG-LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP-NTYVFTKTMGEMIMQ 243 (570)
Q Consensus 166 ~~~~~g-~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-n~Y~~sK~~aE~~v~ 243 (570)
|+.... .++|....+.++ .++ +.|+.||..+|+++.
T Consensus 110 yg~~~~~~~~E~~~~~~~~------------------------------------------~~~~~~Y~~sK~~~E~~~~ 147 (315)
T d1e6ua_ 110 YPKLAKQPMAESELLQGTL------------------------------------------EPTNEPYAIAKIAGIKLCE 147 (315)
T ss_dssp SCTTCCSSBCGGGTTSSCC------------------------------------------CGGGHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCccCCccccCCC------------------------------------------CCCCCHHHHHHHHHHHHHH
Confidence 987532 344432211111 123 369999999999998
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCc--cccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHh
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGW--VEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAH 319 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw--~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~ 319 (570)
.+ ..+++++|+||+.|||+...+.... ..........+.....+..-...+++...+++++++|++.++..++...
T Consensus 148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~~ 227 (315)
T d1e6ua_ 148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227 (315)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhhc
Confidence 86 4489999999999999876432211 1111122233445556666677888999999999999999998887532
Q ss_pred c-----CCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 320 A-----KQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 320 ~-----~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
. .......++|++++ .+.+..++++.+.+..+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~i~~~~~~~~ 267 (315)
T d1e6ua_ 228 HEVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVGYKG 267 (315)
T ss_dssp HHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHTCCS
T ss_pred cccccccccccccccccCCC--cchHHHHHHHHHHHHhCCCc
Confidence 2 11223568999988 88999999999999887654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.94 E-value=1.5e-25 Score=228.11 Aligned_cols=272 Identities=15% Similarity=0.190 Sum_probs=182.1
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|||||||||||++|+++|+++|++| +++.|-..... .+++. .+ . ...+++++.||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V---~~id~~~~~~~-~~~~~-~~---------~----------~~~~~~~i~~D 57 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDL---IVFDNLSRKGA-TDNLH-WL---------S----------SLGNFEFVHGD 57 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEE---EEEECCCSTTH-HHHHH-HH---------H----------TTCCCEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEE---EEEECCCcccc-hhHHH-Hh---------h----------ccCCcEEEEcc
Confidence 79999999999999999999999765 56554322221 22222 00 0 13678999999
Q ss_pred CCCCCCCCChhhhHHHHhCC--ccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec-ccccC
Q 008315 94 ISSEDLGLKDSNLKEELWNE--LDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST-AYVAG 167 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~--vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST-a~v~~ 167 (570)
+++ .+..+.++++ +|+|||+||.+... ++....+++|+.||.+|+++|.+. +++++++.|| +.+++
T Consensus 58 i~~-------~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~ 129 (338)
T d1orra_ 58 IRN-------KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYG 129 (338)
T ss_dssp TTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGT
T ss_pred cCC-------HHHHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccc
Confidence 994 4444566654 69999999998654 355778899999999999999998 5555555555 45444
Q ss_pred CCCC-eeccc--cCCCCC-CCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHH
Q 008315 168 ERTG-LILEN--PLDGAS-GLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQ 243 (570)
Q Consensus 168 ~~~g-~i~E~--~~~e~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~ 243 (570)
.... ...+. ..+... +... .......+.+.|+.+|..+|.++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~y~~~k~~~e~~~~ 176 (338)
T d1orra_ 130 DLEQYKYNETETRYTCVDKPNGY---------------------------------DESTQLDFHSPYGCSKGAADQYML 176 (338)
T ss_dssp TCTTSCEEECSSCEEETTCTTCB---------------------------------CTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccCc---------------------------------ccCCccccccccccccchhhhhhh
Confidence 3321 11111 000000 0000 000011356789999999999988
Q ss_pred Hh--cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHH-----hcCCCceeecCCCceeecchHHHHHHHHHHHH
Q 008315 244 QS--KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVAS-----AQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 244 ~~--~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~-----~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
.+ ..+....++|++.++++...+... . .....++..+ +.+..-.+.++++..+|+++|+|+|++++.++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l 252 (338)
T d1orra_ 177 DYARIFGLNTVVFRHSSMYGGRQFATYD--Q--GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL 252 (338)
T ss_dssp HHHHHHCCEEEEEEECCEECTTCCCBTT--B--CHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred hhhhccCcccccccccceeecccccccc--c--cccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHH
Confidence 75 558899999999999876532211 1 1112222222 23455567899999999999999999999988
Q ss_pred HHhcCCCCCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 317 VAHAKQPSDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
...... .+++||+..+..+++++.|+++.+.+..+..+
T Consensus 253 ~~~~~~--~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~ 290 (338)
T d1orra_ 253 ANVSKI--RGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 290 (338)
T ss_dssp HTHHHH--TTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred hccccc--cCccccccccccccccHHHHHHHHHHHHCCCc
Confidence 643322 26799997665588999999999999888764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.93 E-value=5.5e-25 Score=226.14 Aligned_cols=267 Identities=13% Similarity=0.157 Sum_probs=192.1
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.+||+||+|||||||||||++|+++|++.|++ |+++.|.+....... + .. ...++
T Consensus 3 ~~~~~~KkILVTG~tGfIGs~lv~~Ll~~g~~---V~~~~r~~~~~~~~~--~----------~~----------~~~~~ 57 (356)
T d1rkxa_ 3 NSFWQGKRVFVTGHTGFKGGWLSLWLQTMGAT---VKGYSLTAPTVPSLF--E----------TA----------RVADG 57 (356)
T ss_dssp HHHHTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCSSSSCHH--H----------HT----------TTTTT
T ss_pred hhhhCCCEEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCCCccHHHH--h----------hh----------hcccC
Confidence 47999999999999999999999999999975 578888765543211 0 00 01367
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
++++.||+++ .+...++.+ .+++|+|+||..... +.+.....+|+.|+.+++++|++.+..+.+++.|
T Consensus 58 i~~~~~Dl~d-------~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s 130 (356)
T d1rkxa_ 58 MQSEIGDIRD-------QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT 130 (356)
T ss_dssp SEEEECCTTC-------HHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred CeEEEeeccC-------hHhhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence 9999999994 444445554 579999999986442 4567789999999999999999987777788888
Q ss_pred cccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHH
Q 008315 162 TAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMI 241 (570)
Q Consensus 162 Ta~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~ 241 (570)
|+.++..... +.+..++.+. .+.+.|+.+|..+|..
T Consensus 131 ~~~~~~~~~~---~~~~~~~~~~-----------------------------------------~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 131 SDKCYDNKEW---IWGYRENEAM-----------------------------------------GGYDPYSNSKGCAELV 166 (356)
T ss_dssp CGGGBCCCCS---SSCBCTTSCB-----------------------------------------CCSSHHHHHHHHHHHH
T ss_pred cccccccccc---cccccccccc-----------------------------------------CCCCccccccccchhh
Confidence 8777765432 1111211111 3467899999999988
Q ss_pred HHHh-----------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 242 MQQS-----------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 242 v~~~-----------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+ ..++.++++||+.|||+...+.. ..+..++.+ ..+......++++...++++|+|+|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~------~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD------RIVPDILRA-FEQSQPVIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS------CHHHHHHHH-HHTTCCEECSCTTCEECCEETHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh------HHHHHHHHH-HhCCCceEEeeccccccccccccccc
Confidence 8753 23678999999999998652211 122333334 44555577889999999999999999
Q ss_pred HHHHHHHHhcCCC-CCCceEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 311 AMIVAMVAHAKQP-SDANIYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 311 aii~a~~~~~~~~-~~~~iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++.++....... ......++..+....+++.++++.+.+.++..+
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 286 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA 286 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCc
Confidence 9998887643221 112345554443478999999999999998765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=4.2e-25 Score=214.23 Aligned_cols=211 Identities=17% Similarity=0.130 Sum_probs=156.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
+++|+|||||||||+|++|+++|+++| .+.+|++++|++..... ....++..
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g-~~~~v~~~~R~~~~~~~---------------------------~~~~~i~~ 63 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDE---------------------------EAYKNVNQ 63 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCS---------------------------GGGGGCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCC-CCCEEEEEecChhhhcc---------------------------cccceeee
Confidence 578999999999999999999999997 45689999997644321 11356788
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
+.+|+.+ .++. ...++++|+|||+|+......+.....++|+.++.+++++|++. ++++|||+||..++..
T Consensus 64 ~~~D~~~------~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~- 134 (232)
T d2bkaa1 64 EVVDFEK------LDDY-ASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKS- 134 (232)
T ss_dssp EECCGGG------GGGG-GGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT-
T ss_pred eeecccc------cccc-cccccccccccccccccccccchhhhhhhcccccceeeeccccc-CccccccCCccccccC-
Confidence 8899884 2343 47788999999999987666667778899999999999999997 8999999999987532
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
..+.|+.+|..+|+.+.+ .++
T Consensus 135 ---------------------------------------------------------~~~~Y~~~K~~~E~~l~~--~~~ 155 (232)
T d2bkaa1 135 ---------------------------------------------------------SNFLYLQVKGEVEAKVEE--LKF 155 (232)
T ss_dssp ---------------------------------------------------------CSSHHHHHHHHHHHHHHT--TCC
T ss_pred ---------------------------------------------------------ccchhHHHHHHhhhcccc--ccc
Confidence 246799999999999987 455
Q ss_pred c-EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCce
Q 008315 250 S-LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 250 p-~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~i 328 (570)
+ ++|+||++|+|+..+. +....++.....+. ..+......||++|+|++++.++... ...++
T Consensus 156 ~~~~IlRP~~i~G~~~~~--------~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~~~----~~~~~ 218 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQES--------RPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVVRP----RDKQM 218 (232)
T ss_dssp SEEEEEECCEEECTTGGG--------SHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHTSC----CCSSE
T ss_pred cceEEecCceeecCCCcC--------cHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHhcC----ccCCe
Confidence 4 8999999999986532 11112222222211 12223334699999999999887522 22456
Q ss_pred EEecc
Q 008315 329 YHVGS 333 (570)
Q Consensus 329 yn~~s 333 (570)
+.+.+
T Consensus 219 ~i~~~ 223 (232)
T d2bkaa1 219 ELLEN 223 (232)
T ss_dssp EEEEH
T ss_pred EEEcH
Confidence 76654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.90 E-value=1.1e-22 Score=201.54 Aligned_cols=224 Identities=18% Similarity=0.208 Sum_probs=168.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|+++|.+.|++| +++.|.+ +
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~V---i~~~r~~------------------------------------------~ 36 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEV---IPTDVQD------------------------------------------L 36 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEE---EEECTTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE---EEeechh------------------------------------------c
Confidence 689999999999999999999988654 5555432 2
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCcc---cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKFD---ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f~---~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|++ +.+..+.+++ ++|+|||+||....+ .........|+.++..+.+.+... ...++++||..+++
T Consensus 37 D~~-------d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 37 DIT-------NVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFD 107 (281)
T ss_dssp CTT-------CHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSC
T ss_pred cCC-------CHHHHHHHHHHcCCCEEEeeccccccccccccchhhcccccccccccccccccc--cccccccccceeee
Confidence 555 3333345554 579999999987543 456777899999999999988874 36788889888887
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
... +.++.|.++. .+.+.|..+|..+|.++.+ .
T Consensus 108 ~~~----~~~~~e~~~~-----------------------------------------~~~~~~~~~k~~~e~~~~~--~ 140 (281)
T d1vl0a_ 108 GEA----KEPITEFDEV-----------------------------------------NPQSAYGKTKLEGENFVKA--L 140 (281)
T ss_dssp SCC----SSCBCTTSCC-----------------------------------------CCCSHHHHHHHHHHHHHHH--H
T ss_pred ccc----cccccccccc-----------------------------------------cchhhhhhhhhHHHHHHHH--h
Confidence 643 2233332222 3467899999999999987 5
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+.+.+|+||++|||+... ....++.....+...... ++...++++++|+|+++..++.... ..
T Consensus 141 ~~~~~i~R~~~vyG~~~~----------~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~~-----~g 203 (281)
T d1vl0a_ 141 NPKYYIVRTAWLYGDGNN----------FVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEKN-----YG 203 (281)
T ss_dssp CSSEEEEEECSEESSSSC----------HHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHTC-----CE
T ss_pred CCCccccceeEEeCCCcc----------cccchhhhhccCCceeec--CCceeccchhhhhhhhhhhhhhhcc-----cC
Confidence 678999999999997541 233445555555544444 4588999999999999999986432 35
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||++++ +++|+.|+++.+.+.+|...
T Consensus 204 ~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 230 (281)
T d1vl0a_ 204 TFHCTCK--GICSWYDFAVEIFRLTGIDV 230 (281)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHCCCC
T ss_pred ceeEeCC--CccchHHHHHHHHHHhCCCc
Confidence 8999998 89999999999999999864
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=9.3e-22 Score=196.54 Aligned_cols=248 Identities=16% Similarity=0.194 Sum_probs=153.2
Q ss_pred EEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE-cc
Q 008315 15 ILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA-GD 93 (570)
Q Consensus 15 VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~-gD 93 (570)
|||||||||||++|+++|+++|+. .|+++-+-..+... .++. + ........ .|
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~--~V~~~d~~~~~~~~-~~~~----~-------------------~~~~~~~~~~~ 55 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKF-VNLV----D-------------------LNIADYMDKED 55 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGG-HHHH----T-------------------SCCSEEEEHHH
T ss_pred EEEecCccHHHHHHHHHHHhCCCC--eEEEEECCCCcchh-hccc----c-------------------cchhhhccchH
Confidence 899999999999999999999853 23454322222111 1111 0 01111111 11
Q ss_pred CCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC-
Q 008315 94 ISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG- 171 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g- 171 (570)
+. +..........+++|+|+||..... .+.......|+.++.+++++++.. +++ +++.||..+++....
T Consensus 56 ~~-------~~~~~~~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i~-~v~~ss~~~~~~~~~~ 126 (307)
T d1eq2a_ 56 FL-------IQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EIP-FLYASSAATYGGRTSD 126 (307)
T ss_dssp HH-------HHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TCC-EEEEEEGGGGTTCCSC
T ss_pred HH-------HHHhhhhcccchhhhhhhcccccccccccccccccccccccccccccccc-ccc-cccccccccccccccc
Confidence 11 1110001224689999999976544 445666788899999999999986 554 677777776654331
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh--cCCC
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--KENL 249 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--~~~l 249 (570)
..+|... ..+.+.|+.+|..+|.++..+ ..++
T Consensus 127 ~~~~~~~----------------------------------------------~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (307)
T d1eq2a_ 127 FIESREY----------------------------------------------EKPLNVYGYSKFLFDEYVRQILPEANS 160 (307)
T ss_dssp BCSSGGG----------------------------------------------CCCSSHHHHHHHHHHHHHHHHGGGCSS
T ss_pred ccccccc----------------------------------------------cccccccccccchhhhhcccccccccc
Confidence 1111110 145789999999999999987 5689
Q ss_pred cEEEEeccccccCCCCCCCCccccccc-hHHHHHHHhcCCCce-eecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKT-INALFVASAQGNLPC-LVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~-~~~~i~~~~~G~~~~-~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
+++++||+.|||+...+- ..... ...++..+..|.... ..+++...+++++++|+|+++..++... ...
T Consensus 161 ~~~~~r~~~vyGp~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~-----~~~ 231 (307)
T d1eq2a_ 161 QIVGFRYFNVYGPREGHK----GSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG-----VSG 231 (307)
T ss_dssp CEEEEEECEEESSSCGGG----GGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC-----CCE
T ss_pred ccccccceeEeecccccc----ccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhc-----ccc
Confidence 999999999999865321 11122 223444555554433 4578888999999999999999888632 146
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhccc
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTK 354 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~ 354 (570)
+||++++ .+.++.|+++.+.+..++
T Consensus 232 ~~~~~~~--~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 232 IFNLGTG--RAESFQAVADATLAYHKK 256 (307)
T ss_dssp EEEESCS--CCBCHHHHHHHC------
T ss_pred ccccccc--cchhHHHHHHHHHHhcCC
Confidence 8999998 899999999999776543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.88 E-value=7e-22 Score=197.90 Aligned_cols=241 Identities=11% Similarity=0.094 Sum_probs=173.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.++|||||||||+|++|+++|+++|++| ++++|+.........-. + . .....+++++.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V---~~~~R~~~~~~~~~~~~--~---------~--------~~~~~~v~~v~ 60 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPT---YVLFRPEVVSNIDKVQM--L---------L--------YFKQLGAKLIE 60 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCE---EEECCSCCSSCHHHHHH--H---------H--------HHHTTTCEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEE---EEEECCCcccchhHHHH--H---------h--------hhccCCcEEEE
Confidence 4679999999999999999999999765 78899876654332110 0 0 01136789999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g 171 (570)
+|+.+ .+.....+++++++||+++.... ..|..++.+++++|++. +..++++.||..++.....
T Consensus 61 ~d~~d-------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~~ 124 (312)
T d1qyda_ 61 ASLDD-------HQRLVDALKQVDVVISALAGGVL--------SHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIME 124 (312)
T ss_dssp CCSSC-------HHHHHHHHTTCSEEEECCCCSSS--------STTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSCC
T ss_pred eeccc-------chhhhhhccCcchhhhhhhhccc--------ccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCcc
Confidence 99994 44456888999999999987533 23566778889999887 5566778887666543210
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcE
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~ 251 (570)
.+. .+...|..+|..+|....+ .++++
T Consensus 125 ----------~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~ 151 (312)
T d1qyda_ 125 ----------HAL-----------------------------------------QPGSITFIDKRKVRRAIEA--ASIPY 151 (312)
T ss_dssp ----------CCC-----------------------------------------SSTTHHHHHHHHHHHHHHH--TTCCB
T ss_pred ----------ccc-----------------------------------------chhhhhhHHHHHHHHhhcc--cccce
Confidence 010 2356788888888887765 78999
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
+++||+.++|....+...+..... ..+....++++++...++|+++|+|++++.++...... ...+|++
T Consensus 152 ~i~r~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~--~~~~~~~ 220 (312)
T d1qyda_ 152 TYVSSNMFAGYFAGSLAQLDGHMM---------PPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL--NKTMYIR 220 (312)
T ss_dssp CEEECCEEHHHHTTTSSCTTCCSS---------CCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGS--SSEEECC
T ss_pred EEeccceeecCCccchhhHHHHhh---------hcccccccccccccccceeeHHHHHHHHHHHhcCcccc--CceEEEe
Confidence 999999999976644443332211 12233456788999999999999999999988643221 1346777
Q ss_pred ccCCCCcccHHhHHHHHhhhcccCC
Q 008315 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 332 ~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++ +.+|++|+++.+.+..++..
T Consensus 221 ~~~--~~~s~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 221 PPM--NILSQKEVIQIWERLSEQNL 243 (312)
T ss_dssp CGG--GEEEHHHHHHHHHHHHTCCC
T ss_pred CCC--cCCCHHHHHHHHHHHHCCCC
Confidence 776 78999999999999988764
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.6e-21 Score=183.57 Aligned_cols=202 Identities=13% Similarity=0.107 Sum_probs=150.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|..|+|+|||||||+|++++++|+++|++ |.+++|+..... .....++++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~---V~~~~R~~~~~~---------------------------~~~~~~~~~ 50 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYE---VTVLVRDSSRLP---------------------------SEGPRPAHV 50 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCGGGSC---------------------------SSSCCCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCE---EEEEEcChhhcc---------------------------ccccccccc
Confidence 35689999999999999999999999964 578899654321 111356899
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCC
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGER 169 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~ 169 (570)
+.||+++ .+..+++++++|+|||++|.....+. ..++..++++++++|++. ++++||++||+.++.+.
T Consensus 51 ~~gD~~d-------~~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 51 VVGDVLQ-------AADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDP 118 (205)
T ss_dssp EESCTTS-------HHHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCT
T ss_pred ccccccc-------hhhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCC
Confidence 9999994 44456888999999999997543332 246778999999999997 89999999999987654
Q ss_pred CCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC
Q 008315 170 TGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL 249 (570)
Q Consensus 170 ~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l 249 (570)
.. . + .....|...|..+|+++++ .++
T Consensus 119 ~~------~----~------------------------------------------~~~~~~~~~~~~~e~~l~~--~~~ 144 (205)
T d1hdoa_ 119 TK------V----P------------------------------------------PRLQAVTDDHIRMHKVLRE--SGL 144 (205)
T ss_dssp TC------S----C------------------------------------------GGGHHHHHHHHHHHHHHHH--TCS
T ss_pred cc------c----c------------------------------------------ccccccchHHHHHHHHHHh--cCC
Confidence 21 0 0 0123588889999999987 799
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceE
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIY 329 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iy 329 (570)
+++|+||+.+.+... . |.. .+..+++....+|+++|+|++++.++..+. ..++.+
T Consensus 145 ~~tiirp~~~~~~~~---~------------------~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~---~~g~~~ 199 (205)
T d1hdoa_ 145 KYVAVMPPHIGDQPL---T------------------GAY-TVTLDGRGPSRVISKHDLGHFMLRCLTTDE---YDGHST 199 (205)
T ss_dssp EEEEECCSEEECCCC---C------------------SCC-EEESSSCSSCSEEEHHHHHHHHHHTTSCST---TTTCEE
T ss_pred ceEEEecceecCCCC---c------------------ccE-EEeeCCCCCCCcCCHHHHHHHHHHHhCCCC---CCCEEE
Confidence 999999999876422 1 111 344556677788999999999998886321 224555
Q ss_pred Eec
Q 008315 330 HVG 332 (570)
Q Consensus 330 n~~ 332 (570)
.++
T Consensus 200 ~~s 202 (205)
T d1hdoa_ 200 YPS 202 (205)
T ss_dssp EEE
T ss_pred ecC
Confidence 443
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=6.3e-22 Score=188.61 Aligned_cols=188 Identities=18% Similarity=0.126 Sum_probs=134.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||||++|+++|+++|+. .+|+++.|++... .+++....
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~-~~v~~~~r~~~~~-------------------------------~~~~~~~~ 49 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTL-AKVIAPARKALAE-------------------------------HPRLDNPV 49 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTC-CEEECCBSSCCCC-------------------------------CTTEECCB
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEEEeCCchhh-------------------------------cccccccc
Confidence 589999999999999999999999864 3677777764321 13444444
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.|+. +....+...+|+||||+|..... .......+.|+.++.+++++|++. ++++|+|+||+.+++.
T Consensus 50 ~d~~---------~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~-- 117 (212)
T d2a35a1 50 GPLA---------ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAK-- 117 (212)
T ss_dssp SCHH---------HHGGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTT--
T ss_pred cchh---------hhhhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccc-cccccccccccccccc--
Confidence 4433 22224455789999999876433 345677899999999999999997 9999999999887642
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCC-
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENL- 249 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~l- 249 (570)
..+.|..+|..+|+.+.+ .++
T Consensus 118 --------------------------------------------------------~~~~y~~~K~~~E~~l~~--~~~~ 139 (212)
T d2a35a1 118 --------------------------------------------------------SSIFYNRVKGELEQALQE--QGWP 139 (212)
T ss_dssp --------------------------------------------------------CSSHHHHHHHHHHHHHTT--SCCS
T ss_pred --------------------------------------------------------cccchhHHHHHHhhhccc--cccc
Confidence 246799999999999876 455
Q ss_pred cEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHH
Q 008315 250 SLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMV 317 (570)
Q Consensus 250 p~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~ 317 (570)
.++|+||++|||+...+...+. ......+.++ .....|+++|+|++++.++.
T Consensus 140 ~~~I~Rp~~v~G~~~~~~~~~~------------~~~~~~~~~~----~~~~~i~v~DvA~ai~~~~~ 191 (212)
T d2a35a1 140 QLTIARPSLLFGPREEFRLAEI------------LAAPIARILP----GKYHGIEACDLARALWRLAL 191 (212)
T ss_dssp EEEEEECCSEESTTSCEEGGGG------------TTCCCC--------CHHHHHHHHHHHHHHHHHHT
T ss_pred cceeeCCcceeCCcccccHHHH------------HHHHHhhccC----CCCcEEEHHHHHHHHHHHHc
Confidence 4899999999998654211100 0011111111 22356999999999998875
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.87 E-value=2e-21 Score=193.47 Aligned_cols=233 Identities=21% Similarity=0.162 Sum_probs=160.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|||||||||||++|++.|++.|+. +.+.+... .+.+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~----v~~~~~~~--------------------------------------~~~~ 38 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNL----IALDVHSK--------------------------------------EFCG 38 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEE----EEECTTCS--------------------------------------SSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCE----EEEECCCc--------------------------------------cccC
Confidence 67999999999999999999988742 33333221 0246
Q ss_pred cCCCCCCCCChhhhHHHHhC--CccEEEEcCccCCc---ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccC
Q 008315 93 DISSEDLGLKDSNLKEELWN--ELDVMVNSAAITKF---DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAG 167 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~--~vdiVih~Aa~v~f---~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~ 167 (570)
|+++ .+..+.+++ ++|+|||+||.... .........+|+.++.+++++|++. + .+++++||+.+++
T Consensus 39 Dl~~-------~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 39 DFSN-------PKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFP 109 (298)
T ss_dssp CTTC-------HHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSC
T ss_pred cCCC-------HHHHHHHHHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcc-c-ccccccccccccc
Confidence 7773 343456665 46999999997754 3556778899999999999999886 4 5689999998887
Q ss_pred CCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcC
Q 008315 168 ERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKE 247 (570)
Q Consensus 168 ~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~ 247 (570)
... +.+++|..+. .+.+.|+.+|..+|..+.++..
T Consensus 110 ~~~----~~~~~E~~~~-----------------------------------------~p~~~y~~~k~~~e~~~~~~~~ 144 (298)
T d1n2sa_ 110 GTG----DIPWQETDAT-----------------------------------------SPLNVYGKTKLAGEKALQDNCP 144 (298)
T ss_dssp CCT----TCCBCTTSCC-----------------------------------------CCSSHHHHHHHHHHHHHHHHCS
T ss_pred CCC----CCCCcccccc-----------------------------------------CCCchHhhhhhhhhhhHHhhhc
Confidence 543 2233333332 3468899999999999987543
Q ss_pred CCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCc
Q 008315 248 NLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDAN 327 (570)
Q Consensus 248 ~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~ 327 (570)
...++|++..++.... +....+...+..+. .+...+....++++++|+++++..++......+...+
T Consensus 145 --~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~ 211 (298)
T d1n2sa_ 145 --KHLIFRTSWVYAGKGN---------NFAKTMLRLAKERQ--TLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAG 211 (298)
T ss_dssp --SEEEEEECSEECSSSC---------CHHHHHHHHHHHCS--EEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCE
T ss_pred --ccccccccceeeccCC---------ccchhhhhhhcccc--eeecccceeecccccchHHHHHHHHHhhhhccccccc
Confidence 3456666655543221 11112222233322 2233345788999999999998877764333333468
Q ss_pred eEEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 328 IYHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 328 iyn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+||++++ +.+++.++++.+.+..++..
T Consensus 212 ~~n~~~~--~~~~~~~~~~~i~~~~~~~~ 238 (298)
T d1n2sa_ 212 LYHLVAG--GTTTWHDYAALVFDEARKAG 238 (298)
T ss_dssp EEECCCB--SCEEHHHHHHHHHHHHHHHT
T ss_pred cccccCC--CceecHHHHHHHHhhhhccC
Confidence 9999988 89999999999988776543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.86 E-value=1.2e-21 Score=188.46 Aligned_cols=229 Identities=16% Similarity=0.137 Sum_probs=159.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|||||||||||++++++|+++|++| .|+++.|+.+... . ...+++++.+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v-~v~~~~R~~~~~~---~-------------------------~~~~~~~~~~ 54 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKE---K-------------------------IGGEADVFIG 54 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTC-EEEEEESCHHHHH---H-------------------------TTCCTTEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcE-EEEEEcCCHHHHH---h-------------------------ccCCcEEEEe
Confidence 799999999999999999999999886 5778888642210 0 1257889999
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc----------------cCHHHHHHHHHHHHHHHHHHHHHccCceE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD----------------ERYDVAFGINTLGAIHLVNFAKKCVKLKV 156 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~----------------~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~ 156 (570)
|+++ .+....+++++|+|||+|+..... ........+|+.|+++++..+... ..+.
T Consensus 55 d~~~-------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 126 (252)
T d2q46a1 55 DITD-------ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKH 126 (252)
T ss_dssp CTTS-------HHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSE
T ss_pred eecc-------ccccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-cccc
Confidence 9994 444568889999999999875321 123445688999999999999887 7788
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+.+.|+........ +.. ......|...+.
T Consensus 127 ~~~~s~~~~~~~~~------~~~---------------------------------------------~~~~~~~~~~~~ 155 (252)
T d2q46a1 127 IVVVGSMGGTNPDH------PLN---------------------------------------------KLGNGNILVWKR 155 (252)
T ss_dssp EEEEEETTTTCTTC------GGG---------------------------------------------GGGGCCHHHHHH
T ss_pred cccccccccCCCCc------ccc---------------------------------------------cccccchhhhhh
Confidence 88888776654321 000 012345777777
Q ss_pred HHHHHHHHhcCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHH
Q 008315 237 MGEMIMQQSKENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAM 316 (570)
Q Consensus 237 ~aE~~v~~~~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~ 316 (570)
+.+.+..+ .+++++++||+.|+|+.......+.... ... .....++||+||||++++.++
T Consensus 156 ~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~---------------~~~---~~~~~~~i~~~Dva~a~~~~l 215 (252)
T d2q46a1 156 KAEQYLAD--SGTPYTIIRAGGLLDKEGGVRELLVGKD---------------DEL---LQTDTKTVPRADVAEVCIQAL 215 (252)
T ss_dssp HHHHHHHH--SSSCEEEEEECEEECSCTTSSCEEEEST---------------TGG---GGSSCCEEEHHHHHHHHHHHT
T ss_pred hhhhhhhc--ccccceeecceEEECCCcchhhhhhccC---------------ccc---ccCCCCeEEHHHHHHHHHHHh
Confidence 77776665 7899999999999998654332221110 000 122346899999999999988
Q ss_pred HHhcCCCCCCceEEeccCC-CCcccHHhHHHHHhhhc
Q 008315 317 VAHAKQPSDANIYHVGSSL-RNPVTLVSILDYGFVYF 352 (570)
Q Consensus 317 ~~~~~~~~~~~iyn~~s~~-~~~it~~el~~~~~~~~ 352 (570)
..+. ..+++||++++. ....++.++.+++.+..
T Consensus 216 ~~~~---~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 216 LFEE---AKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp TCGG---GTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred CCcc---ccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 6432 236899998752 23456777777665543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.86 E-value=1.1e-21 Score=195.25 Aligned_cols=236 Identities=13% Similarity=0.145 Sum_probs=167.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||||+|++|+++|+++|++| ++++|........+... . +.. ....++.++.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V---~~l~R~~~~~~~~~~~~-~---------~~~--------~~~~~~~~~~ 61 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPT---FLLVRESTASSNSEKAQ-L---------LES--------FKASGANIVH 61 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCE---EEECCCCCTTTTHHHHH-H---------HHH--------HHTTTCEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeE---EEEECCCccccchhHHH-H---------HHh--------hccCCcEEEE
Confidence 5799999999999999999999999765 78999876544332221 0 111 1135688999
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCCC
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERTG 171 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~g 171 (570)
+|+.+ .......+++++.|+|+++.. ++.++.+++++++.. +.+.+++.|+........
T Consensus 62 ~d~~~-------~~~~~~~~~~~~~vi~~~~~~------------~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~- 120 (307)
T d1qyca_ 62 GSIDD-------HASLVEAVKNVDVVISTVGSL------------QIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNV- 120 (307)
T ss_dssp CCTTC-------HHHHHHHHHTCSEEEECCCGG------------GSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSC-
T ss_pred eeccc-------chhhhhhhhhceeeeeccccc------------ccchhhHHHHHHHHh-ccccceeeeccccccccc-
Confidence 99994 444457778999999999864 333556677888887 778888888765543321
Q ss_pred eeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCcE
Q 008315 172 LILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLSL 251 (570)
Q Consensus 172 ~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp~ 251 (570)
. .. .....|...+..+|..+.+ .++++
T Consensus 121 -----~-----~~-----------------------------------------~~~~~~~~~~~~~~~~~~~--~~~~~ 147 (307)
T d1qyca_ 121 -----H-----AV-----------------------------------------EPAKSVFEVKAKVRRAIEA--EGIPY 147 (307)
T ss_dssp -----C-----CC-----------------------------------------TTHHHHHHHHHHHHHHHHH--HTCCB
T ss_pred -----c-----cc-----------------------------------------ccccccccccccccchhhc--cCCCc
Confidence 0 00 1123456667777777766 68899
Q ss_pred EEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEe
Q 008315 252 VIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHV 331 (570)
Q Consensus 252 ~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~ 331 (570)
+|+||+.|+|+...++..+.. ...++.....+++++...++|+++|+|++++.++......+ ..+||+
T Consensus 148 ~i~r~~~v~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~--~~~~~~ 215 (307)
T d1qyca_ 148 TYVSSNCFAGYFLRSLAQAGL----------TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLN--KTLYLR 215 (307)
T ss_dssp EEEECCEEHHHHTTTTTCTTC----------SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTT--EEEECC
T ss_pred eecccceecCCCccchhhhhh----------hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcC--ceeEEe
Confidence 999999999976544333222 12233445677889999999999999999998876432221 346777
Q ss_pred ccCCCCcccHHhHHHHHhhhcccCC
Q 008315 332 GSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 332 ~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
+++ +.+|+.|+++.+.+..|+.+
T Consensus 216 ~~~--~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 216 LPA--NTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp CGG--GEEEHHHHHHHHHHHTTSCC
T ss_pred CCC--CccCHHHHHHHHHHHHCCCC
Confidence 777 89999999999999998764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.81 E-value=6.3e-19 Score=180.43 Aligned_cols=235 Identities=12% Similarity=0.027 Sum_probs=165.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.|+|+|||||||+|++|+++|+++|++| ++++|+.++....+ +. ...+++++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V---~~l~R~~~~~~~~~-~~-----------------------~~~~v~~~ 54 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHV---RAQVHSLKGLIAEE-LQ-----------------------AIPNVTLF 54 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCE---EEEESCSCSHHHHH-HH-----------------------TSTTEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeE---EEEECCcchhhhhh-hc-----------------------ccCCCEEE
Confidence 46899999999999999999999999765 78999776543211 11 13578999
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEecccccCCCC
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVSTAYVAGERT 170 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vSTa~v~~~~~ 170 (570)
.||+.+ +.+..+.++.+++.+++...... ..|+.++.+++++|++. +++++++.||........
T Consensus 55 ~gD~~d------~~~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~ 118 (350)
T d1xgka_ 55 QGPLLN------NVPLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYG 118 (350)
T ss_dssp ESCCTT------CHHHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTS
T ss_pred EeeCCC------cHHHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHHh-CCCceEEEeeccccccCC
Confidence 999996 35556678899999988765422 23567788999999998 788888888865433211
Q ss_pred CeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHhcCCCc
Q 008315 171 GLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQSKENLS 250 (570)
Q Consensus 171 g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~~~~lp 250 (570)
. .....|..+|...|..+.+ .+++
T Consensus 119 ~------------------------------------------------------~~~~~~~~~k~~~~~~~~~--~~~~ 142 (350)
T d1xgka_ 119 P------------------------------------------------------WPAVPMWAPKFTVENYVRQ--LGLP 142 (350)
T ss_dssp S------------------------------------------------------CCCCTTTHHHHHHHHHHHT--SSSC
T ss_pred c------------------------------------------------------ccchhhhhhHHHHHHHHHh--hccC
Confidence 0 1234577889888888776 6789
Q ss_pred EEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCc-eeecCCCceeecchH-HHHHHHHHHHHHHhcCCCCCCce
Q 008315 251 LVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLP-CLVGETKTIMDVIPV-DMVVNAMIVAMVAHAKQPSDANI 328 (570)
Q Consensus 251 ~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~-~~~~~~~~~~d~VpV-Ddva~aii~a~~~~~~~~~~~~i 328 (570)
++++||+..++....+......... ...|... ..+.+++....++.+ +|++.++..++...... ..+++
T Consensus 143 ~~~vr~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~-~~G~~ 213 (350)
T d1xgka_ 143 STFVYAGIYNNNFTSLPYPLFQMEL--------MPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNGHR 213 (350)
T ss_dssp EEEEEECEEGGGCBSSSCSSCBEEE--------CTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTTCE
T ss_pred ceeeeeceeeccccccccccccccc--------cccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhh-cCCeE
Confidence 9999999988764432222111100 1112211 344567777787765 89999998888643211 13678
Q ss_pred EEeccCCCCcccHHhHHHHHhhhcccCC
Q 008315 329 YHVGSSLRNPVTLVSILDYGFVYFTKKP 356 (570)
Q Consensus 329 yn~~s~~~~~it~~el~~~~~~~~~~~p 356 (570)
|++++ ..+|+.|+++.+.+.+|++.
T Consensus 214 ~~~~g---~~~T~~eia~~l~~~~G~~v 238 (350)
T d1xgka_ 214 IALTF---ETLSPVQVCAAFSRALNRRV 238 (350)
T ss_dssp EEECS---EEECHHHHHHHHHHHHTSCE
T ss_pred EEEeC---CcCCHHHHHHHHHHHHCCcc
Confidence 99976 46999999999999999864
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.60 E-value=2.8e-14 Score=138.04 Aligned_cols=211 Identities=14% Similarity=0.117 Sum_probs=146.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|.+ |++..|++. +++ + +.++. ..++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~---V~~~~r~~~------~~~-~---------~~~~~--------~~~~~~ 56 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAK---VVFGDILDE------EGK-A---------MAAEL--------ADAARY 56 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHH-H---------HHHHT--------GGGEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHH-H---------HHHHh--------hCcceE
Confidence 68999999999999999999999999964 577777542 222 1 11121 256788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.. |.
T Consensus 57 ~~~Dv~~-------~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (244)
T d1nffa_ 57 VHLDVTQ-------PAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA 129 (244)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc
Confidence 9999995 33233333 3699999999986432 45788899999999999986643 32
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||........ ....|+
T Consensus 130 ~~G~Ii~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 153 (244)
T d1nffa_ 130 GRGSIINISSIEGLAGTV--------------------------------------------------------ACHGYT 153 (244)
T ss_dssp TCEEEEEECCGGGTSCCT--------------------------------------------------------TBHHHH
T ss_pred CcceEEeccccccccccc--------------------------------------------------------cccchh
Confidence 346899999987653221 235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|-|+.|-.+..+..+.... .. ...-+...+|
T Consensus 154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------------------~~-----pl~R~~~p~d 210 (244)
T d1nffa_ 154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIF------------------QT-----ALGRAAEPVE 210 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCS------------------CC-----SSSSCBCHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHH------------------hc-----cccCCCCHHH
Confidence 9999999988754 568999999999887654332221110 01 1112566799
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++..... --.|+++.+.+|
T Consensus 211 iA~~v~fL~s~~s~-~itG~~i~vDGG 236 (244)
T d1nffa_ 211 VSNLVVYLASDESS-YSTGAEFVVDGG 236 (244)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhChhhC-CCcCCEEEECCC
Confidence 99999988753332 234788988776
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=3.1e-14 Score=137.87 Aligned_cols=218 Identities=17% Similarity=0.218 Sum_probs=147.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+++||++|||||++.||++++++|+++|.+ |++..|++. +++ ++ .++ ..++.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~---V~~~~r~~~------~l~-~~---------~~~---------~~~~~ 55 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGAR---VVAVSRTQA------DLD-SL---------VRE---------CPGIE 55 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHH-HH---------HHH---------STTCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEECCHH------HHH-HH---------HHh---------cCCCe
Confidence 379999999999999999999999999964 567777532 222 11 112 24578
Q ss_pred EEEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c---cCc
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C---VKL 154 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l 154 (570)
.+.+|+++ ++..+.+++ .+|++||+|+..... +.++..+++|+.|+..+.+.+.. + .+-
T Consensus 56 ~~~~Dv~d-------~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~ 128 (244)
T d1pr9a_ 56 PVCVDLGD-------WEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128 (244)
T ss_dssp EEECCTTC-------HHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCC-------HHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCc
Confidence 89999995 444456655 589999999986532 45788899999999999887654 3 234
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... .....|+.|
T Consensus 129 g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 152 (244)
T d1pr9a_ 129 GAIVNVSSQCSQRAV--------------------------------------------------------TNHSVYCST 152 (244)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred ceEeecccccccccc--------------------------------------------------------cchhhhhhh
Confidence 689999998765322 124579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..+.+.+.. ..++.+..|.|+.|..+..+.. ..+ ......+.... | ..-+...+|+|
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~---~~~----~~~~~~~~~~~----p-----l~R~~~peevA 216 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT---WSD----PHKAKTMLNRI----P-----LGKFAEVEHVV 216 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT---SCS----HHHHHHHHTTC----T-----TCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh---ccC----hHHHHHHHhcC----C-----CCCCcCHHHHH
Confidence 99999888764 4589999999999866432111 011 11111111111 1 11245678999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++++.++.+... --.|+++.+.+|
T Consensus 217 ~~v~fL~S~~a~-~itG~~i~vDGG 240 (244)
T d1pr9a_ 217 NAILFLLSDRSG-MTTGSTLPVEGG 240 (244)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhCchhC-CcCCcEEEECcc
Confidence 999888754332 234788888776
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.59 E-value=5.8e-14 Score=136.72 Aligned_cols=220 Identities=12% Similarity=0.160 Sum_probs=148.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||++.||.+++++|+++|..| +++.|........+.+. ...+ ..++.+
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~v---ii~~r~~~~~~~~~~~~-------------~~~~-------~~~~~~ 59 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKN---FVILDRVENPTALAELK-------------AINP-------KVNITF 59 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSE---EEEEESSCCHHHHHHHH-------------HHCT-------TSEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEE---EEEECCcccHHHHHHHH-------------hhCC-------CCCEEE
Confidence 589999999999999999999999999654 67778766543332222 1111 357899
Q ss_pred EEccCCCCCCCCChhhh---HHHH---hCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHH-cc-----CceEE
Q 008315 90 VAGDISSEDLGLKDSNL---KEEL---WNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKK-CV-----KLKVF 157 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~---~~~l---~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~-~~-----~lk~f 157 (570)
+..|++.+ ..+. .+.+ ...+|++||+||... .+.++..+++|+.|+.++.+++.. |. .-.++
T Consensus 60 ~~~d~~~~-----~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~I 133 (254)
T d1sbya1 60 HTYDVTVP-----VAESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGII 133 (254)
T ss_dssp EECCTTSC-----HHHHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred EEeecCCC-----HHHHHHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceE
Confidence 99999853 2221 1122 246999999999764 567999999999999999987755 31 23579
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||....-.. .....|+.||+.
T Consensus 134 i~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 157 (254)
T d1sbya1 134 ANICSVTGFNAI--------------------------------------------------------HQVPVYSASKAA 157 (254)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTSHHHHHHHHH
T ss_pred EEEechhhccCC--------------------------------------------------------CCCHHHHHHHHH
Confidence 999887764221 123579999998
Q ss_pred HHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 238 GEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 238 aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
...+.+.. ..++.+..|-|+.|..+..+-...|.+.. ..+..... .....+.+++|+++
T Consensus 158 l~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~e~va~~~ 221 (254)
T d1sbya1 158 VVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE----PRVAELLL------------SHPTQTSEQCGQNF 221 (254)
T ss_dssp HHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC----TTHHHHHT------------TSCCEEHHHHHHHH
T ss_pred HHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHH----HHHHhccc------------cCCCCCHHHHHHHH
Confidence 88877654 45799999999999764221111111110 00111111 11235789999999
Q ss_pred HHHHHHhcCCCCCCceEEeccC
Q 008315 313 IVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+.++... ..|.++.+.+|
T Consensus 222 ~~~~~~~----~tG~vi~vdgG 239 (254)
T d1sbya1 222 VKAIEAN----KNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHC----CTTCEEEEETT
T ss_pred HHhhhCC----CCCCEEEECCC
Confidence 8877532 24789998876
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.58 E-value=1.1e-13 Score=134.74 Aligned_cols=216 Identities=11% Similarity=0.064 Sum_probs=144.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++-||++++++|++.|. +|++..|+.. ++. ++ .++. ..++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~------~~~-~~---------~~~~--------~~~~~~ 55 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGA---RVVLADVLDE------EGA-AT---------AREL--------GDAARY 55 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHH------HHH-HH---------HHTT--------GGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCC---EEEEEECCHH------HHH-HH---------HHHh--------CCceEE
Confidence 5899999999999999999999999995 4577777542 222 11 1111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+.+... .
T Consensus 56 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~ 128 (254)
T d1hdca_ 56 QHLDVTI-------EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA 128 (254)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEcccCC-------HHHHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc
Confidence 9999995 33333443 3699999999986432 457788999999999999987542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 129 ~~G~II~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (254)
T d1hdca_ 129 GGGSIVNISSAAGLMGL--------------------------------------------------------ALTSSYG 152 (254)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCeecccccchhcccc--------------------------------------------------------cchhhHH
Confidence 44789999998764322 1245799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec-chHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV-IPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~-VpVD 306 (570)
.||+..+.+.+.. ..++.+..|-|+.|-.+.. .............. ....-+ .-.+
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~-----------------~~~~~~~~~~~~~~-~pl~R~g~~Pe 214 (254)
T d1hdca_ 153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-----------------AETGIRQGEGNYPN-TPMGRVGNEPG 214 (254)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-----------------HHHTCCCSTTSCTT-STTSSCB-CHH
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccc-----------------hhcCHHHHHHHHhC-CCCCCCCCCHH
Confidence 9999999888754 5579999999998854311 11110000000000 000011 2358
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|||++++..+.+... --.|+++.+.+|
T Consensus 215 dvA~~v~fL~S~~a~-~itG~~i~vDGG 241 (254)
T d1hdca_ 215 EIAGAVVKLLSDTSS-YVTGAELAVDGG 241 (254)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhchhhC-CCCCceEEeCCC
Confidence 999999988854332 234889999877
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.57 E-value=3.1e-14 Score=137.21 Aligned_cols=208 Identities=13% Similarity=0.168 Sum_probs=142.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+||++|||||++.||++++++|++.|. +|++..|+... .+++..
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga---~V~~~~r~~~~--------------------------------~~~~~~ 49 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGH---KVAVTHRGSGA--------------------------------PKGLFG 49 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESSSCC--------------------------------CTTSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCcch--------------------------------hcCceE
Confidence 6999999999999999999999999996 45788886543 256778
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. + .
T Consensus 50 ~~~Dv~~~-------~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 122 (237)
T d1uzma1 50 VEVDVTDS-------DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN 122 (237)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCH-------HHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 99999953 3233333 369999999997532 245788899999999988876643 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 123 ~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 146 (237)
T d1uzma1 123 KFGRMIFIGSVSGLWGI--------------------------------------------------------GNQANYA 146 (237)
T ss_dssp TCEEEEEECCCCC-------------------------------------------------------------CCHHHH
T ss_pred CCCceEEEcchhhccCC--------------------------------------------------------cccHHHH
Confidence 44689999997664321 1245799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|..+..+..+ ......... ..+ ..-+.-.+|
T Consensus 147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~---------~~~~~~~~~----~~p-----l~R~~~ped 208 (237)
T d1uzma1 147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD---------ERIQQGALQ----FIP-----AKRVGTPAE 208 (237)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC---------HHHHHHHGG----GCT-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC---------HHHHHHHHh----cCC-----CCCCcCHHH
Confidence 9999888887654 56899999999998654321111 111111111 111 112345689
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.+... --.|+++.+.+|
T Consensus 209 vA~~v~fL~S~~s~-~itG~~i~vdGG 234 (237)
T d1uzma1 209 VAGVVSFLASEDAS-YISGAVIPVDGG 234 (237)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhc-CCcCCeEEECCC
Confidence 99999888754332 234788888776
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.56 E-value=6.8e-14 Score=135.69 Aligned_cols=220 Identities=14% Similarity=0.082 Sum_probs=143.0
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||++|||||++.||++++++|+++|. +|++..|+++... ..+ + .+..
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~---~V~~~~~~~~~~~---~~~--------------~----------~~~~ 51 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGA---LVALCDLRPEGKE---VAE--------------A----------IGGA 51 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSTTHHH---HHH--------------H----------HTCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHH---HHH--------------H----------cCCe
Confidence 47999999999999999999999999996 4577777654321 111 1 1245
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
++.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+.++.+++.. |
T Consensus 52 ~~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~ 124 (248)
T d2d1ya1 52 FFQVDLED-------ERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 124 (248)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCC-------HHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccc
Confidence 68899995 33233433 3699999999976432 45788899999999999998854 3
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... .....|
T Consensus 125 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 148 (248)
T d2d1ya1 125 VGGGAIVNVASVQGLFAE--------------------------------------------------------QENAAY 148 (248)
T ss_dssp TTCEEEEEECCGGGTSBC--------------------------------------------------------TTBHHH
T ss_pred cccccccccccccccccc--------------------------------------------------------cccchh
Confidence 234689999998764321 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+.... .......+......+.. .....-+.-.+
T Consensus 149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~---------~~pl~R~~~pe 216 (248)
T d2d1ya1 149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE---AIALSPDPERTRRDWED---------LHALRRLGKPE 216 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---HHC--------CHHHHT---------TSTTSSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHH---HhhcCCCHHHHHHHHHh---------cCCCCCCcCHH
Confidence 99999999887654 558999999999885531100 00000000000011111 00111234578
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|+++...+.+... --.|+++.+.+|
T Consensus 217 dia~~v~fL~S~~s~-~itG~~i~vDGG 243 (248)
T d2d1ya1 217 EVAEAVLFLASEKAS-FITGAILPVDGG 243 (248)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhc-CCCCcEEEcCcC
Confidence 999999888754332 234788988776
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.56 E-value=1.7e-13 Score=132.76 Aligned_cols=219 Identities=16% Similarity=0.146 Sum_probs=142.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||+++++.|+++|.. |++..|++... ..+.++ +. ..++.+
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~---V~~~~~~~~~~-~~~~~~--------------~~--------g~~~~~ 56 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGAD---IAIADLVPAPE-AEAAIR--------------NL--------GRRVLT 56 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSCCHH-HHHHHH--------------HT--------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCchHH-HHHHHH--------------Hc--------CCcEEE
Confidence 68999999999999999999999999964 56777765421 111111 11 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+++.. | .
T Consensus 57 ~~~Dvs~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 129 (247)
T d2ew8a1 57 VKCDVSQ-------PGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN 129 (247)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc
Confidence 9999995 33333433 3699999999986432 45788899999999999987754 2 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 130 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 153 (247)
T d2ew8a1 130 GWGRIINLTSTTYWLKI--------------------------------------------------------EAYTHYI 153 (247)
T ss_dssp TCEEEEEECCGGGGSCC--------------------------------------------------------SSCHHHH
T ss_pred CCCCccccccchhcccC--------------------------------------------------------cccccch
Confidence 34689999998764321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+..+.... + .... ..........-+.-.+|
T Consensus 154 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~--~------~~~~--------~~~~~~~~l~r~~~ped 217 (247)
T d2ew8a1 154 STKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL--S------AMFD--------VLPNMLQAIPRLQVPLD 217 (247)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------CTTSSSCSCCCTHH
T ss_pred hhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc--c------hhHH--------HHHHHhccCCCCCCHHH
Confidence 9999988887654 557999999999987653321100 0 0000 00000001112345689
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.+.. .--.|++..+.+|
T Consensus 218 vA~~v~fL~S~~s-~~itG~~i~vDGG 243 (247)
T d2ew8a1 218 LTGAAAFLASDDA-SFITGQTLAVDGG 243 (247)
T ss_dssp HHHHHHHHTSGGG-TTCCSCEEEESSS
T ss_pred HHHHHHHHhCchh-cCCcCCeEEECCC
Confidence 9999988875432 2234788888776
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.56 E-value=1.3e-13 Score=134.67 Aligned_cols=224 Identities=19% Similarity=0.190 Sum_probs=145.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|.. |++..|++.. .+.+.+++ ++. ..++.+
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~---l~~~~~~~---------~~~---------g~~~~~ 61 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGAS---VYTCSRNQKE---LNDCLTQW---------RSK---------GFKVEA 61 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHH---------HHT---------TCEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHH---------Hhc---------CCCceE
Confidence 58999999999999999999999999954 5677775322 12222121 111 256788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------C-CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------N-ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~-~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|++++ +..+.++ . .+|++||+||..... +.++..+++|+.|+..+.+++...
T Consensus 62 ~~~Dv~~~-------~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~ 134 (259)
T d2ae2a_ 62 SVCDLSSR-------SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA 134 (259)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhh
Confidence 99999953 2222322 2 489999999975432 457788999999999999877542
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... .....|
T Consensus 135 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (259)
T d2ae2a_ 135 SERGNVVFISSVSGALAV--------------------------------------------------------PYEAVY 158 (259)
T ss_dssp TSSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred hccccccccccccccccc--------------------------------------------------------ccccch
Confidence 244689999998764321 124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+..+... .. ......+..+.... | ..-+.-.+
T Consensus 159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~-~~~~~~~~~~~~~~----p-----l~R~g~pe 225 (259)
T d2ae2a_ 159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI---QD-PEQKENLNKLIDRC----A-----LRRMGEPK 225 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT---TS-HHHHHHHHHHHHTS----T-----TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhh---hc-hhhHHHHHHHHhcC----C-----CCCCcCHH
Confidence 99999988887754 45899999999988654221100 00 00111111121111 1 11234568
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++..... --.|+++.+.+|
T Consensus 226 dvA~~v~fL~S~~s~-~itG~~i~VDGG 252 (259)
T d2ae2a_ 226 ELAAMVAFLCFPAAS-YVTGQIIYVDGG 252 (259)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhC-CCcCcEEEECCC
Confidence 999999888753332 234788888776
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.56 E-value=1.2e-13 Score=134.30 Aligned_cols=222 Identities=13% Similarity=0.108 Sum_probs=145.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|.. |++..|+.+.. +...++ +.++. ..++.+
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~---V~i~~r~~~~~---~~~~~~---------l~~~~--------g~~~~~ 59 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCS---VVVASRNLEEA---SEAAQK---------LTEKY--------GVETMA 59 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHHH---HHHHHH---------HHHHH--------CCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHHHH---------HHHHh--------CCcEEE
Confidence 58999999999999999999999999964 56777754221 111111 22222 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.. |.
T Consensus 60 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~ 132 (251)
T d1vl8a_ 60 FRCDVSN-------YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES 132 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc
Confidence 9999995 33333433 3699999999975432 45788899999999999998754 42
Q ss_pred CceEEEEEeccccc-CCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 KLKVFVHVSTAYVA-GERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~lk~fV~vSTa~v~-~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+-.++|.+||.... ... .....|
T Consensus 133 ~~G~Ii~i~S~~~~~~~~--------------------------------------------------------~~~~~Y 156 (251)
T d1vl8a_ 133 DNPSIINIGSLTVEEVTM--------------------------------------------------------PNISAY 156 (251)
T ss_dssp SSCEEEEECCGGGTCCCS--------------------------------------------------------SSCHHH
T ss_pred ccccccccccchhccccC--------------------------------------------------------ccccch
Confidence 33589999885432 111 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|.|+.|-.+..+ ...........+.... | ..-+.-.+
T Consensus 157 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~-------~~~~~~~~~~~~~~~~----p-----l~R~~~pe 220 (251)
T d1vl8a_ 157 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE-------AVFSDPEKLDYMLKRI----P-----LGRTGVPE 220 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH-------HHHTCHHHHHHHHHTC----T-----TSSCBCGG
T ss_pred HHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH-------hccCCHHHHHHHHhcC----C-----CCCCCCHH
Confidence 99999999988754 56899999999998664331 1111111122222111 0 01123467
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.+.. .--.|+++.+.+|
T Consensus 221 dvA~~v~fL~S~~a-~~itG~~i~vDGG 247 (251)
T d1vl8a_ 221 DLKGVAVFLASEEA-KYVTGQIIFVDGG 247 (251)
T ss_dssp GGHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-CCCcCcEEEeCcC
Confidence 89999988775433 2234788888776
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=3.2e-14 Score=137.69 Aligned_cols=216 Identities=13% Similarity=0.125 Sum_probs=145.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|.. |++..|+++. .+.+. ++. ..+...
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~---Vv~~~r~~~~---l~~~~-------------~~~--------~~~~~~ 54 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAK---VIGTATSENG---AQAIS-------------DYL--------GANGKG 54 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCE---EEEEESSHHH---HHHHH-------------HHH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCHHH---HHHHH-------------HHh--------CCCCcE
Confidence 58999999999999999999999999964 4677775321 12222 121 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+.+... .
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 127 (243)
T d1q7ba_ 55 LMLNVTD-------PASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK 127 (243)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecC-------HHHhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc
Confidence 9999995 33233433 2699999999876432 457888999999999999987542 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||........ ....|.
T Consensus 128 ~~G~II~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 151 (243)
T d1q7ba_ 128 RHGRIITIGSVVGTMGNG--------------------------------------------------------GQANYA 151 (243)
T ss_dssp TCEEEEEECCHHHHHCCT--------------------------------------------------------TCHHHH
T ss_pred CCCEeeeecchhhcCCCC--------------------------------------------------------CCHHHH
Confidence 346899999977543211 235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+..+. +.+ .....+... .| ..-+...+|
T Consensus 152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~---~~~------~~~~~~~~~----~p-----l~R~~~ped 213 (243)
T d1q7ba_ 152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA---LSD------DQRAGILAQ----VP-----AGRLGGAQE 213 (243)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCH------HHHHHHHTT----CT-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh---hhh------hHHHHHHhc----CC-----CCCCCCHHH
Confidence 9999999888764 568999999999886532211 111 111111111 11 112456789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++.+.. .--.|++.++.+|
T Consensus 214 vA~~v~fL~S~~s-~~itGq~i~vdGG 239 (243)
T d1q7ba_ 214 IANAVAFLASDEA-AYITGETLHVNGG 239 (243)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCchh-cCCcCCeEEECCC
Confidence 9999988875333 2234788888776
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.55 E-value=1.1e-13 Score=133.78 Aligned_cols=217 Identities=16% Similarity=0.184 Sum_probs=146.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||++.||++++++|++.|.. |++..|+++ ++. + +.++ ..++.+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~------~l~-~---------~~~~---------~~~~~~ 54 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAK---VVAVTRTNS------DLV-S---------LAKE---------CPGIEP 54 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHH-H---------HHHH---------STTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH------HHH-H---------HHHh---------cCCCeE
Confidence 58999999999999999999999999964 567777532 221 1 1111 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHhC---CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c---cCce
Q 008315 90 VAGDISSEDLGLKDSNLKEELWN---ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C---VKLK 155 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~---~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~---~~lk 155 (570)
+.+|+++ ++..+++++ .+|++||+||..... +.++..+++|+.|+..+.+.+.. + ++-.
T Consensus 55 ~~~Dv~~-------~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g 127 (242)
T d1cyda_ 55 VCVDLGD-------WDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPG 127 (242)
T ss_dssp EECCTTC-------HHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCE
T ss_pred EEEeCCC-------HHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccC
Confidence 9999995 444456665 589999999976432 45788899999999999987643 2 1335
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... .....|+.||
T Consensus 128 ~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 151 (242)
T d1cyda_ 128 SIVNVSSMVAHVTF--------------------------------------------------------PNLITYSSTK 151 (242)
T ss_dssp EEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred cccccchhhccccC--------------------------------------------------------CccccccchH
Confidence 89999988654322 1235799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+.+.. ..++.+..|-|+.|-.+..+. ..........+.... | ..-+...+|+|+
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~-------~~~~~~~~~~~~~~~----p-----l~R~~~peeva~ 215 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK-------VSADPEFARKLKERH----P-----LRKFAEVEDVVN 215 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH-------HTCCHHHHHHHHHHS----T-----TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHh-------hcCCHHHHHHHHhcC----C-----CCCCcCHHHHHH
Confidence 9999988764 568999999999886542211 111111111111111 1 112355789999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++.++.+... --.|+++.+.+|
T Consensus 216 ~v~fL~S~~s~-~itG~~i~vDGG 238 (242)
T d1cyda_ 216 SILFLLSDRSA-STSGGGILVDAG 238 (242)
T ss_dssp HHHHHHSGGGT-TCCSSEEEESTT
T ss_pred HHHHHhCchhc-CcCCceEEeCcc
Confidence 99988754332 234788888765
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.55 E-value=1.8e-13 Score=132.14 Aligned_cols=213 Identities=14% Similarity=0.144 Sum_probs=142.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|. +|++..|++ ++++ ++. + .-+..+
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~---~V~~~~r~~------~~l~-~~~---------~----------~~~~~~ 53 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGA---RLVACDIEE------GPLR-EAA---------E----------AVGAHP 53 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCH------HHHH-HHH---------H----------TTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCH------HHHH-HHH---------H----------HcCCeE
Confidence 5899999999999999999999999996 457777753 2222 111 1 124678
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+... .
T Consensus 54 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 126 (242)
T d1ulsa_ 54 VVMDVAD-------PASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK 126 (242)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEecCC-------HHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc
Confidence 8999995 33333433 3689999999976431 457888999999999999887653 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-..++.+||+...+.. ....|+
T Consensus 127 ~~~~i~~~ss~~~~~~~---------------------------------------------------------~~~~Y~ 149 (242)
T d1ulsa_ 127 NPGSIVLTASRVYLGNL---------------------------------------------------------GQANYA 149 (242)
T ss_dssp CCEEEEEECCGGGGCCT---------------------------------------------------------TCHHHH
T ss_pred ccceeeeeccccccCCC---------------------------------------------------------CCcchH
Confidence 34556777775433211 235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+..+..+ + .......... | ..-+.-.+|
T Consensus 150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---~------~~~~~~~~~~----p-----l~R~~~ped 211 (242)
T d1ulsa_ 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP---E------KVREKAIAAT----P-----LGRAGKPLE 211 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC---H------HHHHHHHHTC----T-----TCSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC---H------HHHHHHHhcC----C-----CCCCCCHHH
Confidence 9999999887754 55799999999999765432221 1 1111111111 1 112345689
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++.+... --.|+++.+.+|
T Consensus 212 ia~~v~fL~S~~s~-~itG~~i~vDGG 237 (242)
T d1ulsa_ 212 VAYAALFLLSDESS-FITGQVLFVDGG 237 (242)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhchhhC-CCCCcEEEECCC
Confidence 99999888754322 234788888776
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.55 E-value=1.4e-13 Score=134.54 Aligned_cols=232 Identities=14% Similarity=0.155 Sum_probs=144.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||++.||++++++|+++|.+ |++..|+... ..+.+.+++ .++. ..++.+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~---V~~~~r~~~~--~~~~~~~~~---------~~~~--------g~~~~~ 59 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGAD---IVLNGFGDAA--EIEKVRAGL---------AAQH--------GVKVLY 59 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCE---EEEECCSCHH--HHHHHHHHH---------HHHH--------TSCEEE
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEeCCcHH--HHHHHHHHH---------HHhc--------CCcEEE
Confidence 68999999999999999999999999964 5677775422 122222221 1222 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC-V-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~-~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+... .
T Consensus 60 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 132 (260)
T d1x1ta1 60 DGADLSK-------GEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ 132 (260)
T ss_dssp ECCCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EECCCCC-------HHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc
Confidence 9999995 33333443 369999999997542 1457888999999999998876442 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... .....|+
T Consensus 133 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 156 (260)
T d1x1ta1 133 GFGRIINIASAHGLVAS--------------------------------------------------------ANKSAYV 156 (260)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCceEeecccccceecc--------------------------------------------------------CCcchhh
Confidence 34689999998765321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCC-ccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPG-WVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~g-w~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+..+.... ..+. .+... ... ............-+...+
T Consensus 157 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~--~~~----~~~~~~~~~Pl~R~g~pe 229 (260)
T d1x1ta1 157 AAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQ--ETA----ARELLSEKQPSLQFVTPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------CHHHHCTTCCCBCHH
T ss_pred hhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhh-cCCCh--HHH----HHHHHHhcCCCCCCcCHH
Confidence 9999988887654 567999999999986643221100 0000 00000 000 000000000111245678
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|+++..++.+... --.|++.++.+|
T Consensus 230 diA~~v~fL~S~~a~-~itG~~i~vDGG 256 (260)
T d1x1ta1 230 QLGGTAVFLASDAAA-QITGTTVSVDGG 256 (260)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhChhhC-CCcCCEEEECcc
Confidence 999999988754332 234788888776
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=1.1e-13 Score=134.91 Aligned_cols=220 Identities=16% Similarity=0.148 Sum_probs=145.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|.. |++..|++. ..+.+.+++ ++. ..++.+
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~~~~~~~~l---------~~~---------g~~~~~ 64 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGAS---VVVSDINAD---AANHVVDEI---------QQL---------GGQAFA 64 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCE---EEEEESCHH---HHHHHHHHH---------HHT---------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHH---------HHc---------CCcEEE
Confidence 68999999999999999999999999964 567777532 222222222 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc------ccCHHHHHHHHHHHHHHHHHHHHH-cc--C
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF------DERYDVAFGINTLGAIHLVNFAKK-CV--K 153 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f------~~~~~~~~~~Nv~gt~~ll~~a~~-~~--~ 153 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. +. +
T Consensus 65 ~~~Dvs~-------~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 137 (255)
T d1fmca_ 65 CRCDITS-------EQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG 137 (255)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc
Confidence 9999995 32233333 469999999997532 245778899999999999886643 21 3
Q ss_pred ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 154 LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 154 lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
-.++|.+||....... .....|+.
T Consensus 138 ~g~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~a 161 (255)
T d1fmca_ 138 GGVILTITSMAAENKN--------------------------------------------------------INMTSYAS 161 (255)
T ss_dssp CEEEEEECCGGGTCCC--------------------------------------------------------TTCHHHHH
T ss_pred ccccccccccchhccc--------------------------------------------------------cccccchh
Confidence 3578899987654322 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
||+..+.+.+.. ..++.+..|-|+.|-.+..+ .+. . ......+.... | ..-+.-.+|+
T Consensus 162 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~---~~~----~-~e~~~~~~~~~----p-----l~R~g~pedv 224 (255)
T d1fmca_ 162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---SVI----T-PEIEQKMLQHT----P-----IRRLGQPQDI 224 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH---TTC----C-HHHHHHHHHTC----S-----SCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh---ccC----C-HHHHHHHHhcC----C-----CCCCcCHHHH
Confidence 999999888754 55799999999998653221 000 0 11122222211 1 1123456899
Q ss_pred HHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+++..++.+... --.|++..+.+|
T Consensus 225 A~~v~fL~S~~s~-~itG~~i~vDGG 249 (255)
T d1fmca_ 225 ANAALFLCSPAAS-WVSGQILTVSGG 249 (255)
T ss_dssp HHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHhCchhc-CCcCCEEEECcC
Confidence 9999988753322 234789988887
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.54 E-value=2.1e-13 Score=133.20 Aligned_cols=222 Identities=15% Similarity=0.132 Sum_probs=146.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|. +|++..|++.. ..+.+.+++ ++. ..++.+
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~---~Vv~~~r~~~~--~~~~~~~~~---------~~~---------g~~~~~ 61 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKA---KVVVNYRSKED--EANSVLEEI---------KKV---------GGEAIA 61 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHH--HHHHHHHHH---------HHT---------TCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCcHH--HHHHHHHHH---------Hhc---------CCcEEE
Confidence 6999999999999999999999999995 45777886532 122222121 111 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.. |.
T Consensus 62 ~~~Dvt~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 134 (261)
T d1geea_ 62 VKGDVTV-------ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVEN 134 (261)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccc
Confidence 9999995 33333443 3689999999986432 45788899999999999887754 31
Q ss_pred C-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 K-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+ -..+|.+||....... .....|
T Consensus 135 ~~g~~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (261)
T d1geea_ 135 DIKGTVINMSSVHEKIPW--------------------------------------------------------PLFVHY 158 (261)
T ss_dssp TCCCEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cccccccccccchhcccC--------------------------------------------------------cccccc
Confidence 2 2358889987654321 123579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+... +.... ......+.. .. | ..-+...+
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~------~~~~~-~~~~~~~~~-~~---p-----l~R~~~pe 222 (261)
T d1geea_ 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA------EKFAD-PEQRADVES-MI---P-----MGYIGEPE 222 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH------HHHHS-HHHHHHHHT-TC---T-----TSSCBCHH
T ss_pred ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh------hhcCC-HHHHHHHHh-cC---C-----CCCCCCHH
Confidence 99999999887754 56899999999998654221 10001 111111111 11 1 11234578
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|+++..++.+.. .--.|+++.+.+|
T Consensus 223 diA~~v~fL~S~~s-~~itG~~i~vDGG 249 (261)
T d1geea_ 223 EIAAVAAWLASSEA-SYVTGITLFADGG 249 (261)
T ss_dssp HHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchh-cCCcCCeEEECCC
Confidence 99999998885433 2234889999887
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.54 E-value=3.9e-13 Score=131.86 Aligned_cols=225 Identities=16% Similarity=0.174 Sum_probs=147.4
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||++.||++++++|+++|. +|++..|+.. ..+.+.+++-+ ..++.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~---~~~~~~~~l~~-------------------~~~~~ 57 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGA---KVVIADIADD---HGQKVCNNIGS-------------------PDVIS 57 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCHH---HHHHHHHHHCC-------------------TTTEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHHHHhcC-------------------CCceE
Confidence 47999999999999999999999999995 4567777532 12222212110 24678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----c----cCHHHHHHHHHHHHHHHHHHHHH-c
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----D----ERYDVAFGINTLGAIHLVNFAKK-C 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----~----~~~~~~~~~Nv~gt~~ll~~a~~-~ 151 (570)
++.+|+++ ++..+.++ ..+|++||+||.... . +.++..+++|+.|+..+.+.+.. |
T Consensus 58 ~~~~Dv~~-------~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m 130 (268)
T d2bgka1 58 FVHCDVTK-------DEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVM 130 (268)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EEEccCCC-------HHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchH
Confidence 89999995 33233443 369999999996432 1 34778899999999999987754 3
Q ss_pred c--CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCc
Q 008315 152 V--KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPN 229 (570)
Q Consensus 152 ~--~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n 229 (570)
. +-.++|.+||........ +...
T Consensus 131 ~~~~~g~ii~iss~~~~~~~~-------------------------------------------------------~~~~ 155 (268)
T d2bgka1 131 IPAKKGSIVFTASISSFTAGE-------------------------------------------------------GVSH 155 (268)
T ss_dssp GGGTCEEEEEECCGGGTCCCT-------------------------------------------------------TSCH
T ss_pred hhcCCCCcccccccccccccc-------------------------------------------------------cccc
Confidence 2 345888888876543211 1234
Q ss_pred hHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 230 TYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 230 ~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
.|+.||+..+.+.+.. ..++.+..|.|+.|-.+......+... ........-.. . ...-+..
T Consensus 156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~------~~~~~~~~~~~-~------~~gr~~~ 222 (268)
T d2bgka1 156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDS------SRVEELAHQAA-N------LKGTLLR 222 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCH------HHHHHHHHHTC-S------SCSCCCC
T ss_pred ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCH------HHHHHHHHhcc-c------cCCCCcC
Confidence 7999999999888754 568999999999997764432222111 11111110000 0 0112456
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++.+.. .--.|+++.+.+|
T Consensus 223 pedvA~~v~fL~S~~s-~~itGq~i~VDGG 251 (268)
T d2bgka1 223 AEDVADAVAYLAGDES-KYVSGLNLVIDGG 251 (268)
T ss_dssp HHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhChhh-CCccCceEEECcC
Confidence 7999999998886433 2234889999877
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.53 E-value=3.6e-13 Score=131.34 Aligned_cols=225 Identities=15% Similarity=0.135 Sum_probs=145.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+|||||||+.||++++++|++.|.+ |++..|++... +...++ +++. ..++.+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~---V~i~~r~~~~l---~~~~~~---------~~~~---------~~~~~~ 59 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGAR---VYTCSRNEKEL---DECLEI---------WREK---------GLNVEG 59 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHHHH---HHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHHH---HHHHHH---------HHhc---------CCCceE
Confidence 68999999999999999999999999964 57778864221 111111 1111 256788
Q ss_pred EEccCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|+++ ++..+.++ ..+|+++|+|+.... .+.++..+++|+.++..+.+++...
T Consensus 60 ~~~D~s~-------~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~ 132 (258)
T d1ae1a_ 60 SVCDLLS-------RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA 132 (258)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEeecCC-------HHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccc
Confidence 9999995 33222322 248999999998642 2457888999999999999877532
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
++..++|++||....... .....|
T Consensus 133 ~~~g~ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (258)
T d1ae1a_ 133 SQNGNVIFLSSIAGFSAL--------------------------------------------------------PSVSLY 156 (258)
T ss_dssp HTSEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred cccccccccccccccccc--------------------------------------------------------ccchhH
Confidence 255789999998775322 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.+|+..+.+.+.. ..++.+..|.|+.|..+..+. +..........+..+.... + ..-+...+
T Consensus 157 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~----p-----lgR~~~pe 224 (258)
T d1ae1a_ 157 SASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET---AIKKNPHQKEEIDNFIVKT----P-----MGRAGKPQ 224 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHHS----T-----TCSCBCHH
T ss_pred HHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhh---hhhhhhhhHHHHHHHHhcC----C-----CCCCcCHH
Confidence 99999999888764 558999999999997654321 1111111112222221110 0 11256789
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.+... --.|+.+.+.+|
T Consensus 225 diA~~v~fL~S~~s~-~itG~~i~vDGG 251 (258)
T d1ae1a_ 225 EVSALIAFLCFPAAS-YITGQIIWADGG 251 (258)
T ss_dssp HHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHhChhhC-CCcCcEEEeCCC
Confidence 999999988853332 224777887766
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.52 E-value=8.5e-14 Score=135.71 Aligned_cols=225 Identities=16% Similarity=0.196 Sum_probs=143.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|. +|++..|+.. ..+.+. ++. ..++.+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~~~~r~~~---~l~~~~-------------~~~--------~~~~~~ 55 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGA---RVAIADINLE---AARATA-------------AEI--------GPAACA 55 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTE---EEEEEESCHH---HHHHHH-------------HHH--------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHH-------------HHh--------CCceEE
Confidence 5899999999999999999999999995 4567777532 111111 121 256889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHH-Hc-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAK-KC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~-~~-~- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+. .+ +
T Consensus 56 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~ 128 (256)
T d1k2wa_ 56 IALDVTD-------QASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAG 128 (256)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHh
Confidence 9999995 33333443 3699999999976532 4578889999999999998653 22 2
Q ss_pred -CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 -KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 -~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+-.++|++||....... .....|
T Consensus 129 ~~~g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 152 (256)
T d1k2wa_ 129 GRGGKIINMASQAGRRGE--------------------------------------------------------ALVGVY 152 (256)
T ss_dssp TSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred ccCCccccccchhhcccc--------------------------------------------------------ccccch
Confidence 34689999998754321 124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCC-ccccccc-hHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPG-WVEDLKT-INALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~g-w~~~~~~-~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
..||+..+.+.+.. ..++.+..|.|+.|-.+..+.... +.+.... .......+... .| ..-+..
T Consensus 153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~P-----lgR~~~ 223 (256)
T d1k2wa_ 153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA----VP-----FGRMGR 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH----ST-----TSSCBC
T ss_pred hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc----CC-----CCCCcC
Confidence 99999999888654 558999999999886643210000 0000000 00000001000 00 011345
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++..... --.|+++.+.+|
T Consensus 224 p~evA~~v~fL~S~~a~-~iTG~~i~vDGG 252 (256)
T d1k2wa_ 224 AEDLTGMAIFLATPEAD-YIVAQTYNVDGG 252 (256)
T ss_dssp HHHHHHHHHHTTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhC-CccCceEEECcc
Confidence 68999999887753322 234788888776
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.51 E-value=2.1e-13 Score=132.41 Aligned_cols=219 Identities=14% Similarity=0.145 Sum_probs=145.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||.+||||||+.||++++++|++.|. +|++..|++.. .+.+.+++ ++. ..++..
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga---~V~~~~r~~~~---l~~~~~~l---------~~~---------g~~~~~ 63 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVS---HVICISRTQKS---CDSVVDEI---------KSF---------GYESSG 63 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS---EEEEEESSHHH---HHHHHHHH---------HTT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 4799999999999999999999999995 45677775322 22222222 111 246889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+++.. | .
T Consensus 64 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~ 136 (251)
T d2c07a1 64 YAGDVSK-------KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN 136 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC
Confidence 9999995 33333443 3699999999975432 45788899999999999987643 2 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... .....|+
T Consensus 137 ~~G~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~ 160 (251)
T d2c07a1 137 RYGRIINISSIVGLTGN--------------------------------------------------------VGQANYS 160 (251)
T ss_dssp TCEEEEEECCTHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCeEEEEECCHHhcCCC--------------------------------------------------------CCCHHHH
Confidence 44689999997764221 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+..+.. . ......+.... | ..-+...+|
T Consensus 161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~------~~~~~~~~~~~----p-----l~R~~~ped 222 (251)
T d2c07a1 161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---S------EQIKKNIISNI----P-----AGRMGTPEE 222 (251)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---C------HHHHHHHHTTC----T-----TSSCBCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---C------HHHHHHHHhcC----C-----CCCCcCHHH
Confidence 9999999988764 5689999999999876543211 1 12222222211 1 112456789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++.++.+... --.|+++.+.+|
T Consensus 223 vA~~v~fL~S~~s~-~itG~~i~vDGG 248 (251)
T d2c07a1 223 VANLACFLSSDKSG-YINGRVFVIDGG 248 (251)
T ss_dssp HHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHhCchhC-CCcCcEEEECCC
Confidence 99999888754332 234788888776
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.51 E-value=1.3e-13 Score=134.49 Aligned_cols=204 Identities=22% Similarity=0.214 Sum_probs=139.4
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.|-.+++||||||||.||++++++|+++|. ++|+++.|+..+....+.+.+++.+ . ..++
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga--~~vvl~~R~~~~~~~~~~~~~~l~~----------~--------g~~v 64 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRSGPDADGAGELVAELEA----------L--------GART 64 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTC--SEEEEEESSGGGSTTHHHHHHHHHH----------T--------TCEE
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCC--CEEEEEeCCccCHHHHHHHHHHHHh----------c--------cccc
Confidence 455678999999999999999999999986 3567788875444333333222211 1 2578
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhC------CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHccCc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWN------ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKCVKL 154 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~------~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~~~l 154 (570)
.++.+|+++ .+..+.+++ .+|.|||+|+..... +.++..+++|+.|+.++.++.... +.
T Consensus 65 ~~~~~Dv~d-------~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~ 136 (259)
T d2fr1a1 65 TVAACDVTD-------RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DL 136 (259)
T ss_dssp EEEECCTTC-------HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CC
T ss_pred cccccccch-------HHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CC
Confidence 999999995 333445543 388999999986432 335667899999999999887765 66
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||........ ....|+.+
T Consensus 137 ~~iv~~SS~a~~~g~~--------------------------------------------------------~~~~YaAa 160 (259)
T d2fr1a1 137 TAFVLFSSFASAFGAP--------------------------------------------------------GLGGYAPG 160 (259)
T ss_dssp SEEEEEEEHHHHTCCT--------------------------------------------------------TCTTTHHH
T ss_pred ceEeeecchhhccCCc--------------------------------------------------------ccHHHHHH
Confidence 7899999987643221 13469999
Q ss_pred HHHHHHHHHHh-cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 235 KTMGEMIMQQS-KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 235 K~~aE~~v~~~-~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
|+..|.+..+. ..|++++.|.|+.|.++ |+.+. . +. ..+. ..-...++.+++++++.
T Consensus 161 ka~l~~la~~~~~~Gi~v~~I~pg~~~~~------g~~~~-----~-~~----~~~~------~~G~~~~~~~~~~~~l~ 218 (259)
T d2fr1a1 161 NAYLDGLAQQRRSDGLPATAVAWGTWAGS------GMAEG-----P-VA----DRFR------RHGVIEMPPETACRALQ 218 (259)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCBC----------------------------CT------TTTEECBCHHHHHHHHH
T ss_pred HHhHHHHHHHHHhCCCCEEECCCCcccCC------ccccc-----h-HH----HHHH------hcCCCCCCHHHHHHHHH
Confidence 99999988776 67899999999987653 22111 0 00 0000 01124578899999988
Q ss_pred HHHH
Q 008315 314 VAMV 317 (570)
Q Consensus 314 ~a~~ 317 (570)
.++.
T Consensus 219 ~~l~ 222 (259)
T d2fr1a1 219 NALD 222 (259)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.51 E-value=3.5e-13 Score=131.88 Aligned_cols=232 Identities=13% Similarity=0.123 Sum_probs=139.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||.++||||++.||++++++|++.|.. |++..|+... .+.+.+++. +... ...++.+
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~~---l~~~~~~l~---------~~~~------~~~~~~~ 61 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAK---VTITGRHAER---LEETRQQIL---------AAGV------SEQNVNS 61 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHHH---------HTTC------CGGGEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHHH---------hcCC------CcCceEE
Confidence 68999999999999999999999999954 5777776422 222222222 1110 1256899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.+|+++ ++..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~ 134 (264)
T d1spxa_ 62 VVADVTT-------DAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH 134 (264)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc
Confidence 9999995 33333443 369999999986421 1347788999999999998887653
Q ss_pred -c-CceEEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 -V-KLKVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 -~-~lk~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
+ +-.++|.++|... .... ...
T Consensus 135 m~~~~g~iI~~~S~~~~~~~~--------------------------------------------------------~~~ 158 (264)
T d1spxa_ 135 LSSTKGEIVNISSIASGLHAT--------------------------------------------------------PDF 158 (264)
T ss_dssp HHHHTCEEEEECCTTSSSSCC--------------------------------------------------------TTS
T ss_pred cccccCcceeeeeeccccccC--------------------------------------------------------CCc
Confidence 1 2245666665443 2111 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|.|+.|-.+........-+............... .| ..-+.
T Consensus 159 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~P-----l~R~g 229 (264)
T d1spxa_ 159 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC----VP-----AGVMG 229 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH----CT-----TSSCB
T ss_pred hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc----CC-----CCCCc
Confidence 56999999998887654 558999999999986643321110000001111111111110 00 01134
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++......--.|+++.+.+|
T Consensus 230 ~pedvA~~v~fL~S~~~s~~itG~~i~vDGG 260 (264)
T d1spxa_ 230 QPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 260 (264)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence 5689999999887533222224788888776
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=2.3e-13 Score=132.00 Aligned_cols=220 Identities=14% Similarity=0.115 Sum_probs=144.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||+++++.|+++|. +|++..|++.. .+.+. ++ ..++.+
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~---~~~~~-------------~~---------~~~~~~ 55 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGA---RVVICDKDESG---GRALE-------------QE---------LPGAVF 55 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHH-------------HH---------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHH-------------Hh---------cCCCeE
Confidence 6899999999999999999999999996 45677775321 11111 12 246788
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHHc-c-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKKC-V- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~~-~- 152 (570)
+.+|+++ ++..+.++ ..+|++||+||... +. +.++..+++|+.|+..+.+++... +
T Consensus 56 ~~~Dvs~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~ 128 (250)
T d1ydea1 56 ILCDVTQ-------EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 128 (250)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHh
Confidence 9999995 33334443 36899999999642 22 347788999999999999877542 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... .....|.
T Consensus 129 ~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (250)
T d1ydea1 129 SQGNVINISSLVGAIGQ--------------------------------------------------------AQAVPYV 152 (250)
T ss_dssp HTCEEEEECCHHHHHCC--------------------------------------------------------TTCHHHH
T ss_pred CCCCCcccccccccccc--------------------------------------------------------cCcchhH
Confidence 22589999998764321 1245799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+..+...+.. ......+....... ...-+.-.+|
T Consensus 153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~~~~---------pl~R~g~p~e 220 (250)
T d1ydea1 153 ATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM---PDPRASIREGMLAQ---------PLGRMGQPAE 220 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS---SSHHHHHHHHHHTS---------TTSSCBCHHH
T ss_pred HHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcC---CCHHHHHHHHHhcC---------CCCCCCCHHH
Confidence 9999998887654 56899999999998543211000000 01111222211111 0112456789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|++++..+.+ . .--.|+++.+.+|
T Consensus 221 va~~v~fL~Sd-a-~~itG~~i~vDGG 245 (250)
T d1ydea1 221 VGAAAVFLASE-A-NFCTGIELLVTGG 245 (250)
T ss_dssp HHHHHHHHHHH-C-TTCCSCEEEESTT
T ss_pred HHHHHHHHhCc-c-CCCcCCeEEECCC
Confidence 99999887753 3 2235788888776
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.50 E-value=4.3e-13 Score=130.80 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=133.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|. +|++..|++.. .+...++ +.+. ..++..
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga---~V~~~~r~~~~---l~~~~~~---------~~~~---------~~~~~~ 61 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGA---VIHTCARNEYE---LNECLSK---------WQKK---------GFQVTG 61 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHH---------HHHT---------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHH---------HHhc---------CCceEE
Confidence 5899999999999999999999999996 45777776422 1111111 1111 246899
Q ss_pred EEccCCCCCCCCChhhhHHHHh--------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW--------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~--------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~--- 151 (570)
+.+|++++ ++ .+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+...
T Consensus 62 ~~~Dv~~~------~~-v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 134 (259)
T d1xq1a_ 62 SVCDASLR------PE-REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA 134 (259)
T ss_dssp EECCTTSH------HH-HHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCH------HH-HHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccc
Confidence 99999953 22 22322 2489999999976432 457888999999999999887542
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... .....|
T Consensus 135 ~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y 158 (259)
T d1xq1a_ 135 SGCGNIIFMSSIAGVVSA--------------------------------------------------------SVGSIY 158 (259)
T ss_dssp HSSCEEEEEC------------------------------------------------------------------CCHH
T ss_pred cccccccccccccccccc--------------------------------------------------------cccccc
Confidence 244689999987654221 124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+..+... .+. ..... .... ...-+.-.+
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~--~~~------~~~~~----~~~~-----pl~R~~~pe 221 (259)
T d1xq1a_ 159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDE------FKKVV----ISRK-----PLGRFGEPE 221 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------------CCGG
T ss_pred cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc--hHH------HHHHH----HhCC-----CCCCCcCHH
Confidence 99999999887654 56899999999998654321100 000 00000 0000 111233467
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|||++++.++.+.. .--.|++..+.+|
T Consensus 222 dvA~~v~fL~S~~s-~~iTG~~i~vDGG 248 (259)
T d1xq1a_ 222 EVSSLVAFLCMPAA-SYITGQTICVDGG 248 (259)
T ss_dssp GGHHHHHHHTSGGG-TTCCSCEEECCCC
T ss_pred HHHHHHHHHhCchh-cCCcCcEEEeCCC
Confidence 89999988775332 2234778888766
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.50 E-value=7e-13 Score=128.68 Aligned_cols=219 Identities=12% Similarity=0.149 Sum_probs=143.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|.. |++..|+.+ ..+.+.+++ . ...++.+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~---V~~~~r~~~---~~~~~~~~~-------------~------~~~~~~~ 58 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAK---VMITGRHSD---VGEKAAKSV-------------G------TPDQIQF 58 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHH-------------C------CTTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHh-------------C------CCCcEEE
Confidence 68999999999999999999999999964 567777532 222222111 1 0257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-- 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-- 152 (570)
+.+|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+.+.. |.
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~ 131 (251)
T d1zk4a1 59 FQHDSSD-------EDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNK 131 (251)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhc
Confidence 9999995 33233333 3689999999985431 45778899999999999998754 32
Q ss_pred Cc-eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 153 KL-KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 153 ~l-k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
+- .++|.+||....... .....|
T Consensus 132 ~~gg~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 155 (251)
T d1zk4a1 132 GLGASIINMSSIEGFVGD--------------------------------------------------------PSLGAY 155 (251)
T ss_dssp SSCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHH
T ss_pred CCCCceEeeeccceeccC--------------------------------------------------------CCchhH
Confidence 22 378999987654221 123579
Q ss_pred HHHHHHHHHHHHHh-------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..+.+.+.. ..++.+..|.|+.|-.+..+.. ..... ... .....| ..-+.-
T Consensus 156 ~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~-------~~~~~-~~~----~~~~~p-----l~R~~~ 218 (251)
T d1zk4a1 156 NASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-------PGAEE-AMS----QRTKTP-----MGHIGE 218 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-------TTHHH-HHT----STTTCT-----TSSCBC
T ss_pred HHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc-------CCHHH-HHH----HHhCCC-----CCCCcC
Confidence 99999988876632 3479999999999865432111 11111 000 000111 112456
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++.+... --.|+++.+.+|
T Consensus 219 pedvA~~v~fL~S~~s~-~itG~~i~vDGG 247 (251)
T d1zk4a1 219 PNDIAYICVYLASNESK-FATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhC-CCcCcEEEECcc
Confidence 79999999988754332 234788888776
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=3.6e-13 Score=133.98 Aligned_cols=227 Identities=10% Similarity=0.110 Sum_probs=145.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
.++||+++||||++.||+++++.|++.|. +|++..|+.... +... +.|+.+.+. ....++.
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga---~Vvi~~r~~~~l---~~~~---------~el~~~~~~----~~~~~~~ 69 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGS---NVVIASRKLERL---KSAA---------DELQANLPP----TKQARVI 69 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHH---------HHHHHTSCT----TCCCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHH---------HHHHhhhcc----ccCceEE
Confidence 47999999999999999999999999996 457777764321 1111 122222221 1135789
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
.+.+|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+.+.. |
T Consensus 70 ~~~~Dvs~-------~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~ 142 (297)
T d1yxma1 70 PIQCNIRN-------EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMK 142 (297)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHH
T ss_pred EEeccCCC-------HHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcc
Confidence 99999995 33233433 3699999999975432 45788899999999999988753 2
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+|++...+. .....|
T Consensus 143 ~~~g~Ii~~ss~~~~~~---------------------------------------------------------~~~~~Y 165 (297)
T d1yxma1 143 EHGGSIVNIIVPTKAGF---------------------------------------------------------PLAVHS 165 (297)
T ss_dssp HHCEEEEEECCCCTTCC---------------------------------------------------------TTCHHH
T ss_pred ccccccccccccccccc---------------------------------------------------------cccccc
Confidence 13356777776433221 124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-CccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
+.||+..+.+.+.. ..++.+..|.|+.|..+...... .+.+. .........+. .-+...
T Consensus 166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~----------~~~~~~~~~pl-----gR~g~p 230 (297)
T d1yxma1 166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQS----------FFEGSFQKIPA-----KRIGVP 230 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGG----------GGTTGGGGSTT-----SSCBCT
T ss_pred hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHH----------HHHHHHhcCCC-----CCCcCH
Confidence 99999888887654 56899999999998764321111 11110 00111111111 123446
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++.+... --.|+++.+.+|
T Consensus 231 edvA~~v~fL~Sd~s~-~iTG~~i~VDGG 258 (297)
T d1yxma1 231 EEVSSVVCFLLSPAAS-FITGQSVDVDGG 258 (297)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CcCCcEEEeCcC
Confidence 8999999988864332 234889999887
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.49 E-value=4.6e-13 Score=131.89 Aligned_cols=227 Identities=14% Similarity=0.170 Sum_probs=140.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|.+ |++..|++ +++. + +.++. ..++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~---V~i~~r~~------~~l~-~---------~~~~~--------~~~~~~ 55 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAK---VAVLDKSA------ERLA-E---------LETDH--------GDNVLG 55 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHH-H---------HHHHH--------GGGEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCH------HHHH-H---------HHHHc--------CCCeeE
Confidence 58999999999999999999999999964 56777753 2222 1 11122 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc------------cCHHHHHHHHHHHHHHHHHHHHH
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD------------ERYDVAFGINTLGAIHLVNFAKK 150 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~------------~~~~~~~~~Nv~gt~~ll~~a~~ 150 (570)
+.+|+++ ++..+.++ ..+|++||+||...+. +.++..+++|+.|+..+.+.+..
T Consensus 56 ~~~Dv~~-------~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p 128 (276)
T d1bdba_ 56 IVGDVRS-------LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLP 128 (276)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred Eeccccc-------HHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHH
Confidence 9999995 33233333 3699999999975321 12678899999999999887754
Q ss_pred -c-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 151 -C-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 151 -~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
| ++-.++|.+||....-.. ...
T Consensus 129 ~m~~~~g~iI~i~S~~~~~~~--------------------------------------------------------~~~ 152 (276)
T d1bdba_ 129 ALVASRGNVIFTISNAGFYPN--------------------------------------------------------GGG 152 (276)
T ss_dssp HHHHHTCEEEEECCGGGTSTT--------------------------------------------------------SSC
T ss_pred HHHhcCCCceeeeechhccCC--------------------------------------------------------CCC
Confidence 2 122577888776543211 113
Q ss_pred chHHHHHHHHHHHHHHh----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 229 NTYVFTKTMGEMIMQQS----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
..|+.||+..+.+.+.. .+++.+..|.|+.|-.+...+...+...-.....-+........ | ..-+..
T Consensus 153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---P-----lgR~g~ 224 (276)
T d1bdba_ 153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVL---P-----IGRMPE 224 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTC---T-----TSSCCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcC---C-----CCCCcC
Confidence 56999999888887654 55699999999999765433322111110000000111111111 0 111334
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++..+......--.|+++++.+|
T Consensus 225 peeva~~v~fL~S~~~a~~itG~~i~VDGG 254 (276)
T d1bdba_ 225 VEEYTGAYVFFATRGDAAPATGALLNYDGG 254 (276)
T ss_dssp GGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred HHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence 678899888766321112224789999876
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.49 E-value=5.6e-13 Score=130.10 Aligned_cols=166 Identities=16% Similarity=0.183 Sum_probs=120.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||+++++.|++.|.. |++..|++.. .+.+.+++ ++. ..++..
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~---l~~~~~~~---------~~~---------g~~~~~ 58 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTA---IALLDMNREA---LEKAEASV---------REK---------GVEARS 58 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHH---------HTT---------TSCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEE
Confidence 68999999999999999999999999964 5677775322 22222122 111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
+.+|+++ ++..+.++ ..+|++||+||... +. +.++..+++|+.|+..+.+.+.. |
T Consensus 59 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~ 131 (260)
T d1zema1 59 YVCDVTS-------EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMIT 131 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhh
Confidence 9999995 33233333 36999999999653 22 34778899999999999998754 3
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||........ ....|
T Consensus 132 ~~~G~II~isS~~~~~~~~--------------------------------------------------------~~~~Y 155 (260)
T d1zema1 132 QNYGRIVNTASMAGVKGPP--------------------------------------------------------NMAAY 155 (260)
T ss_dssp HTCEEEEEECCHHHHSCCT--------------------------------------------------------TBHHH
T ss_pred hcCCCCCeeechhhccCCc--------------------------------------------------------chHHH
Confidence 2446899999987653211 23579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+
T Consensus 156 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 156 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 99999999888754 55799999999998664
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.49 E-value=7.5e-13 Score=127.13 Aligned_cols=212 Identities=11% Similarity=0.059 Sum_probs=141.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||++.||++++++|+++|. +|++..|++ +.+++ ....+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga---~V~~~~r~~------~~l~~------------------------~~~~~ 48 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGA---EVTICARNE------ELLKR------------------------SGHRY 48 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC---EEEEEESCH------HHHHH------------------------TCSEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCH------HHHHh------------------------cCCcE
Confidence 5899999999999999999999999996 456777753 22221 23456
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cCceEEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VKLKVFVH 159 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk~fV~ 159 (570)
+.+|+++. .+...+-+.++|++||+||..... +.++..+++|+.++..+.+.+.. | .+-.++|.
T Consensus 49 ~~~Dv~~~------~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~ 122 (234)
T d1o5ia_ 49 VVCDLRKD------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVA 122 (234)
T ss_dssp EECCTTTC------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEcchHHH------HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccc
Confidence 78999852 232334557899999999975432 45778899999999998887743 2 14467899
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... .....|..||+..+
T Consensus 123 i~S~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 146 (234)
T d1o5ia_ 123 ITSFSVISPI--------------------------------------------------------ENLYTSNSARMALT 146 (234)
T ss_dssp ECCGGGTSCC--------------------------------------------------------TTBHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------cccccchhHHHHHH
Confidence 9987654321 12457999999888
Q ss_pred HHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHH
Q 008315 240 MIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIV 314 (570)
Q Consensus 240 ~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~ 314 (570)
.+.+.. ..++.+..|.|+.|-.+..+. ..+ ......+.... ...-+.-.+|+|+++..
T Consensus 147 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~---~~~-----~~~~~~~~~~~---------pl~R~~~pediA~~v~f 209 (234)
T d1o5ia_ 147 GFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLS-----EEKKKQVESQI---------PMRRMAKPEEIASVVAF 209 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSC-----HHHHHHHHTTS---------TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEeecccCccchhhhhh---hcC-----HHHHHHHHhcC---------CCCCCcCHHHHHHHHHH
Confidence 777654 558999999999886543210 000 01111111111 11124568899999988
Q ss_pred HHHHhcCCCCCCceEEeccC
Q 008315 315 AMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 315 a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+.+.. .--.|+++.+.+|
T Consensus 210 L~S~~s-~~itG~~i~vDGG 228 (234)
T d1o5ia_ 210 LCSEKA-SYLTGQTIVVDGG 228 (234)
T ss_dssp HHSGGG-TTCCSCEEEESTT
T ss_pred HhChhh-cCCcCcEEEECcc
Confidence 875332 2234788988776
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=7.3e-13 Score=128.79 Aligned_cols=229 Identities=15% Similarity=0.224 Sum_probs=146.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||++|||||++.||++++++|+++|. +|++..|+... .+...+++ .+..+ ..++.++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~---~~~~~~~l---------~~~~~-------~~~~~~~ 59 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA---KVALVDWNLEA---GVQCKAAL---------HEQFE-------PQKTLFI 59 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------TTTSC-------GGGEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------HHhcC-------CCcEEEE
Confidence 689999999999999999999999995 45777776432 12222121 11111 2578999
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHH-ccC-----ceEE
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKK-CVK-----LKVF 157 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~-~~~-----lk~f 157 (570)
.+|+++ ++..+.++ ..+|++||+|+... .++++..+++|+.++..+.+++.. |.. -.++
T Consensus 60 ~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~I 131 (254)
T d2gdza1 60 QCDVAD-------QQQLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGII 131 (254)
T ss_dssp ECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEE
T ss_pred EeecCC-------HHHHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEE
Confidence 999995 33333433 36999999999864 466899999999999988887754 211 2469
Q ss_pred EEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHH
Q 008315 158 VHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTM 237 (570)
Q Consensus 158 V~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~ 237 (570)
|.+||....... .....|+.||+.
T Consensus 132 v~isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaa 155 (254)
T d2gdza1 132 INMSSLAGLMPV--------------------------------------------------------AQQPVYCASKHG 155 (254)
T ss_dssp EEECCGGGTSCC--------------------------------------------------------TTCHHHHHHHHH
T ss_pred EeeccHhhccCC--------------------------------------------------------CCccchHHHHHH
Confidence 999998754221 123579999998
Q ss_pred HHHHHHH------h-cCCCcEEEEeccccccCCCCCCCC---ccccccchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 238 GEMIMQQ------S-KENLSLVIIRPTIVSGTYKEPFPG---WVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 238 aE~~v~~------~-~~~lp~~IvRPsiV~g~~~~p~~g---w~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
.+.+.+. + ..++.+..|.|+.|-.+.-+.... ..........+....-.| -+...+|
T Consensus 156 l~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------------r~~~ped 222 (254)
T d2gdza1 156 IVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY-------------GILDPPL 222 (254)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH-------------CCBCHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC-------------CCcCHHH
Confidence 8887652 2 567999999999985432211100 000000001111111111 1234589
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccCCCCcccHHh
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSSLRNPVTLVS 343 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~~~~~it~~e 343 (570)
+|++++.++.+.. -+|++..+.+| ..+.|.|
T Consensus 223 vA~~v~fL~s~~~---itG~~i~VdGG--~~~~~~~ 253 (254)
T d2gdza1 223 IANGLITLIEDDA---LNGAIMKITTS--KGIHFQD 253 (254)
T ss_dssp HHHHHHHHHHCTT---CSSCEEEEETT--TEEEECC
T ss_pred HHHHHHHHHcCCC---CCCCEEEECCC--Ceeeccc
Confidence 9999999886432 35889999887 5565544
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.49 E-value=4.5e-13 Score=130.63 Aligned_cols=227 Identities=14% Similarity=0.108 Sum_probs=146.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|. +|++..|+.... +...+++ .+..+ ..++..
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~l---~~~~~~~---------~~~~~-------~~~~~~ 59 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGA---KLSLVDVSSEGL---EASKAAV---------LETAP-------DAEVLT 59 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHH---HHHHHHH---------HHHCT-------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHH---HHHHHHH---------HhhCC-------CCeEEE
Confidence 6899999999999999999999999995 457777764321 2222111 11111 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHH-c--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKK-C-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~-- 151 (570)
+.+|+++ ++..+.++ ..+|++||+||... +. +.++..+++|+.|+..+.+.+.. |
T Consensus 60 ~~~Dvt~-------~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~ 132 (258)
T d1iy8a_ 60 TVADVSD-------EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE 132 (258)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred EeccCCC-------HHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhh
Confidence 9999995 33333443 36999999999642 22 45778899999999999987744 2
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||....... .....|
T Consensus 133 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 156 (258)
T d1iy8a_ 133 QGSGMVVNTASVGGIRGI--------------------------------------------------------GNQSGY 156 (258)
T ss_dssp HTCCEEEEECCGGGTSBC--------------------------------------------------------SSBHHH
T ss_pred hcCCCCcccccHhhccCC--------------------------------------------------------CCchHH
Confidence 244679999997754221 124679
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccc--cchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDL--KTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~--~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..+.+.+.. ..++.+..|-|+.|..+..+ .+.... .........+.... ...-+.-
T Consensus 157 ~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~---------pl~R~~~ 224 (258)
T d1iy8a_ 157 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVE---NSMKQLDPENPRKAAEEFIQVN---------PSKRYGE 224 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH---HHHHHHCTTCHHHHHHHHHTTC---------TTCSCBC
T ss_pred HHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHH---HHHhhcCcccHHHHHHHHHhcC---------CCCCCcC
Confidence 99999998887654 55899999999998653211 000000 00111112222111 0112345
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++..+.+.. .--.|++..+.+|
T Consensus 225 p~dvA~~v~fL~S~~s-~~itG~~i~VDGG 253 (258)
T d1iy8a_ 225 APEIAAVVAFLLSDDA-SYVNATVVPIDGG 253 (258)
T ss_dssp HHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchh-cCCcCceEEcCcc
Confidence 7899999998876433 2234788888876
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.48 E-value=9.3e-13 Score=129.37 Aligned_cols=232 Identities=12% Similarity=0.142 Sum_probs=142.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|+++|. +|++..|++.. .+.+.+++.+ .. ....++..
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga---~V~l~~r~~~~---l~~~~~~l~~---------~~------~~~~~~~~ 61 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGA---NVTITGRSSER---LEETRQIILK---------SG------VSEKQVNS 61 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHHT---------TT------CCGGGEEE
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHHHh---------cC------CCCCceEE
Confidence 6899999999999999999999999995 45777776422 2222222221 10 01246899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc--------cc---CHHHHHHHHHHHHHHHHHHHHHc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF--------DE---RYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f--------~~---~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
+.+|+++ ++..+.++ ..+|++||+||.... +. .++..+++|+.|+..+.+++...
T Consensus 62 ~~~Dvs~-------~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~ 134 (272)
T d1xkqa_ 62 VVADVTT-------EDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 134 (272)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc
Confidence 9999995 33333433 369999999997532 11 26778999999999999887553
Q ss_pred --cCceEEEEEecc-cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 152 --VKLKVFVHVSTA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 152 --~~lk~fV~vSTa-~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
++-..+|.++|. ...... ...
T Consensus 135 m~~~~g~iI~~~Ss~a~~~~~--------------------------------------------------------~~~ 158 (272)
T d1xkqa_ 135 LVASKGEIVNVSSIVAGPQAQ--------------------------------------------------------PDF 158 (272)
T ss_dssp HHHHTCEEEEECCGGGSSSCC--------------------------------------------------------CSS
T ss_pred ccccCCccccccchhccccCC--------------------------------------------------------CCc
Confidence 122355555553 322111 123
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|+.||+..+.+.+.. ..++.+..|-|+.|-.+..+.....-.............. ...| ..-+.
T Consensus 159 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-----lgR~g 229 (272)
T d1xkqa_ 159 LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK----ECIP-----IGAAG 229 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT----TTCT-----TSSCB
T ss_pred chhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHh----cCCC-----CCCCc
Confidence 57999999988887654 5689999999999865432111100000000011111111 1111 11244
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
-.+|+|+++..++......--.|+++.+.+|
T Consensus 230 ~pediA~~v~fL~S~~as~~iTG~~i~vDGG 260 (272)
T d1xkqa_ 230 KPEHIANIILFLADRNLSFYILGQSIVADGG 260 (272)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence 5689999998887533222224788988877
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.47 E-value=9.3e-13 Score=129.51 Aligned_cols=232 Identities=12% Similarity=0.136 Sum_probs=143.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++||||++.||++++++|++.|. +|++..|++. ..+.+.+++.+ ... ...++..
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga---~V~~~~r~~~---~l~~~~~~i~~---------~~~------~~~~~~~ 60 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGA---QVTITGRNED---RLEETKQQILK---------AGV------PAEKINA 60 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC---EEEEEESCHH---HHHHHHHHHHH---------TTC------CGGGEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHH---HHHHHHHHHHH---------cCC------CCcceEE
Confidence 6899999999999999999999999995 4567777542 22233322221 110 1257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-----c----cCHHHHHHHHHHHHHHHHHHHHHc--
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-----D----ERYDVAFGINTLGAIHLVNFAKKC-- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-----~----~~~~~~~~~Nv~gt~~ll~~a~~~-- 151 (570)
+.+|+++ ++..+.++ ..+|++||+||.... . +.++..+++|+.|+..+.+.+...
T Consensus 61 ~~~Dv~~-------~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~ 133 (274)
T d1xhla_ 61 VVADVTE-------ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI 133 (274)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred EEeeCCC-------HHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccc
Confidence 9999995 33333433 368999999986422 1 346788999999999998877542
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.+++.+||....... .....
T Consensus 134 ~~~~g~ii~~ss~~~~~~~--------------------------------------------------------~~~~~ 157 (274)
T d1xhla_ 134 KTKGEIVNVSSIVAGPQAH--------------------------------------------------------SGYPY 157 (274)
T ss_dssp HTTCEEEEECCGGGSSSCC--------------------------------------------------------TTSHH
T ss_pred ccccccccchhhhhccccC--------------------------------------------------------CCCce
Confidence 233567777765432211 11357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|..||+..+.+.+.. ..++.+..|.|+.|-.+..+... ........ +...........| ..-+...
T Consensus 158 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~---~~~~~~~~-~~~~~~~~~~~iP-----lgR~g~p 228 (274)
T d1xhla_ 158 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG---LPETASDK-LYSFIGSRKECIP-----VGHCGKP 228 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT---CCHHHHHH-HHHHHHHCTTTCT-----TSSCBCH
T ss_pred ehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc---ccchhhHH-HHHHHHHHHcCCC-----CCCCcCH
Confidence 999999999888653 56899999999998654221100 00000011 1111111111111 1123457
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++......--.|+++.+.+|
T Consensus 229 ediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 229 EEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred HHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 89999999887422122224789998887
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.46 E-value=1.3e-12 Score=127.15 Aligned_cols=227 Identities=14% Similarity=0.101 Sum_probs=145.0
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.||.+|||||++.||++++++|+++|.. |++..|++. ..+.+.+++ ++. ..++.++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~---V~i~~r~~~---~l~~~~~~l---------~~~---------g~~~~~~ 56 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLR---VFVCARGEE---GLRTTLKEL---------REA---------GVEADGR 56 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHH---------HHT---------TCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHH---------Hhc---------CCcEEEE
Confidence 3789999999999999999999999964 567777532 222222222 111 2568899
Q ss_pred EccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-----
Q 008315 91 AGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC----- 151 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~----- 151 (570)
.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+...
T Consensus 57 ~~Dvs~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~ 129 (257)
T d2rhca1 57 TCDVRS-------VPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLE 129 (257)
T ss_dssp ECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHH
T ss_pred EeecCC-------HHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHh
Confidence 999995 33233443 3689999999976432 457888999999999999988641
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|.+||........ ....|
T Consensus 130 ~~~g~Ii~i~S~~~~~~~~--------------------------------------------------------~~~~Y 153 (257)
T d2rhca1 130 RGTGRIVNIASTGGKQGVV--------------------------------------------------------HAAPY 153 (257)
T ss_dssp HTEEEEEEECCGGGTSCCT--------------------------------------------------------TCHHH
T ss_pred cCCcccccccccccccccc--------------------------------------------------------cchhH
Confidence 2446789998876543221 23579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCC-Cccccc-cchHHHHHHHhcCCCceeecCCCceeecch
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFP-GWVEDL-KTINALFVASAQGNLPCLVGETKTIMDVIP 304 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~-gw~~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~Vp 304 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+..+... .+.+.. .........+.... | ..-+.-
T Consensus 154 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~----P-----lgR~~~ 224 (257)
T d2rhca1 154 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV----P-----IGRYVQ 224 (257)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS----T-----TSSCBC
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC----C-----CCCCcC
Confidence 99999998888754 45799999999988543211000 000000 00111122222111 1 112455
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 305 VDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 305 VDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.+|+|++++.++.+... --.|+++.+.+|
T Consensus 225 pedia~~v~fL~S~~s~-~itG~~i~vDGG 253 (257)
T d2rhca1 225 PSEVAEMVAYLIGPGAA-AVTAQALNVCGG 253 (257)
T ss_dssp HHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhc-CCcCceEEECcC
Confidence 78999999888754332 234788888776
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.46 E-value=3.2e-12 Score=124.59 Aligned_cols=227 Identities=13% Similarity=0.172 Sum_probs=145.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+||++|||||++.||++++++|++.|. +|++..|+..... ...+++ .++. ..++..
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga---~V~i~~r~~~~~~---~~~~~~---------~~~~--------g~~~~~ 63 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGA---NVAVIYRSAADAV---EVTEKV---------GKEF--------GVKTKA 63 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCTTHH---HHHHHH---------HHHH--------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCHHHHH---HHHHHH---------HHHh--------CCceEE
Confidence 6899999999999999999999999995 5678888765432 111111 1122 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (570)
+.+|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+.+.. |
T Consensus 64 ~~~Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~ 136 (260)
T d1h5qa_ 64 YQCDVSN-------TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQK 136 (260)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEccCCC-------HHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccc
Confidence 9999995 33333443 3699999999875321 45788899999999998887643 2
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
..-..++.+|+..........+ .. ......|
T Consensus 137 ~~~g~i~~~~s~~~~~~~~~~~--~~-----------------------------------------------~~~~~~Y 167 (260)
T d1h5qa_ 137 QQKGSIVVTSSMSSQIINQSSL--NG-----------------------------------------------SLTQVFY 167 (260)
T ss_dssp TCCEEEEEECCGGGTSCCEEET--TE-----------------------------------------------ECSCHHH
T ss_pred ccceEEEEeecccccccccccc--cc-----------------------------------------------Cccccch
Confidence 2334566666665543221000 00 0124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..++.+..|-|+.|-.+.... .+ ............ ..-+.-.+
T Consensus 168 ~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~----~~-----~~~~~~~~~~~p---------l~R~g~pe 229 (260)
T d1h5qa_ 168 NSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH----MD-----KKIRDHQASNIP---------LNRFAQPE 229 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SC-----HHHHHHHHHTCT---------TSSCBCGG
T ss_pred hhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc----cC-----HHHHHHHHhcCC---------CCCCcCHH
Confidence 99999999987754 568999999999986543211 11 122222222111 01134467
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.+... --.|+++.+.+|
T Consensus 230 dvA~~v~fL~S~~s~-~itG~~i~VDGG 256 (260)
T d1h5qa_ 230 EMTGQAILLLSDHAT-YMTGGEYFIDGG 256 (260)
T ss_dssp GGHHHHHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHHHHHHhcchhC-CCcCceEEECCC
Confidence 899999888754332 224788888776
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.46 E-value=1.5e-12 Score=126.59 Aligned_cols=225 Identities=16% Similarity=0.088 Sum_probs=141.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.+|||||++.||++++++|+++|.. |++..|++.. .+.+.+++ ++. ..++.++.+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~---V~~~~r~~~~---l~~~~~~i---------~~~---------g~~~~~~~~ 57 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFA---VAIADYNDAT---AKAVASEI---------NQA---------GGHAVAVKV 57 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESCHHH---HHHHHHHH---------HHT---------TCCEEEEEC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCE---EEEEECCHHH---HHHHHHHH---------Hhc---------CCcEEEEEe
Confidence 56799999999999999999999964 5677775422 22222222 111 257889999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c---cCc
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C---VKL 154 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~---~~l 154 (570)
|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.. + ++-
T Consensus 58 Dv~~-------~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~ 130 (255)
T d1gega_ 58 DVSD-------RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHG 130 (255)
T ss_dssp CTTS-------HHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC
T ss_pred eCCC-------HHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccc
Confidence 9995 33333433 3699999999975431 45788899999999999887643 2 234
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
.++|.+||....... .....|+.|
T Consensus 131 g~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~as 154 (255)
T d1gega_ 131 GKIINACSQAGHVGN--------------------------------------------------------PELAVYSSS 154 (255)
T ss_dssp EEEEEECCGGGTSCC--------------------------------------------------------TTBHHHHHH
T ss_pred cccccccchhhcccC--------------------------------------------------------cccccchhC
Confidence 578999887654321 124579999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcc-ccc-cchHHHHHHHhcCCCceeecCCCceeecchHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWV-EDL-KTINALFVASAQGNLPCLVGETKTIMDVIPVDM 307 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~-~~~-~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDd 307 (570)
|+..+.+.+.. ..|+.+..|.|+.|-.+..+...... +.. .........+... . ...-+...+|
T Consensus 155 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----pl~R~~~pee 225 (255)
T d1gega_ 155 KFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR----I-----TLGRLSEPED 225 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT----C-----TTCSCBCHHH
T ss_pred HHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhc----C-----CCCCCcCHHH
Confidence 99988887754 55899999999988543211000000 000 0000011111111 0 1112455789
Q ss_pred HHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 308 VVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 308 va~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+++..++.+.. .--.|+++.+.+|
T Consensus 226 vA~~v~fL~S~~a-~~itG~~i~vDGG 251 (255)
T d1gega_ 226 VAACVSYLASPDS-DYMTGQSLLIDGG 251 (255)
T ss_dssp HHHHHHHHHSGGG-TTCCSCEEEESSS
T ss_pred HHHHHHHHhCchh-CCccCcEEEecCC
Confidence 9999998885432 2234788888776
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.45 E-value=1.4e-12 Score=126.76 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=142.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+++||||++.||++++++|+++|.. |++..|++. ..+.+. ++. ..+..
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~---V~~~~~~~~---~~~~~~-------------~~~--------~~~~~ 55 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAK---VAFSDINEA---AGQQLA-------------AEL--------GERSM 55 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECSCHH---HHHHHH-------------HHH--------CTTEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHH-------------HHh--------CCCeE
Confidence 378999999999999999999999999964 567666432 122222 222 25678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc-
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV- 152 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~- 152 (570)
++.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.. |+
T Consensus 56 ~~~~Dv~~-------~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~ 128 (253)
T d1hxha_ 56 FVRHDVSS-------EADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128 (253)
T ss_dssp EECCCTTC-------HHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred EEEeecCC-------HHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 89999995 32233333 3689999999975432 45788899999999999887754 32
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|++||....... .....|+
T Consensus 129 ~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 152 (253)
T d1hxha_ 129 TGGSIINMASVSSWLPI--------------------------------------------------------EQYAGYS 152 (253)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTBHHHH
T ss_pred cCCceecccchhhhcCc--------------------------------------------------------ccccccc
Confidence 23689999998764321 1235799
Q ss_pred HHHHHHHHHHHHh-----c--CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 233 FTKTMGEMIMQQS-----K--ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~--~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
.||+..+.+.+.. . .++.+..|-|+.|-.+..+ .+.+. ..... ....... ......+...
T Consensus 153 asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~---~~~~~-~~~~~----~~~~~~~-----~~~~gr~~~p 219 (253)
T d1hxha_ 153 ASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ---ASLPK-GVSKE----MVLHDPK-----LNRAGRAYMP 219 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH---HHSCT-TCCHH----HHBCBTT-----TBTTCCEECH
T ss_pred chhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHH---hhCcc-hhhHH----HHHhCcc-----ccccCCCCCH
Confidence 9999888887643 2 3588999999988653210 00000 00000 0000000 0011134567
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++..+.+... --.|+++++.+|
T Consensus 220 edvA~~v~fL~S~~s~-~itG~~i~VDGG 247 (253)
T d1hxha_ 220 ERIAQLVLFLASDESS-VMSGSELHADNS 247 (253)
T ss_dssp HHHHHHHHHHHSGGGT-TCCSCEEEESSS
T ss_pred HHHHHHHHHHhChhhC-CCcCcEEEECcc
Confidence 9999999988754332 234788888765
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.44 E-value=3.9e-12 Score=123.63 Aligned_cols=220 Identities=16% Similarity=0.150 Sum_probs=139.5
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||++||||||| .||++++++|+++|.+ |++..|+.+.....+... .. ..+.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~---V~i~~~~~~~~~~~~~~~-------------~~---------~~~~ 60 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE---VALSYQAERLRPEAEKLA-------------EA---------LGGA 60 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTCE---EEEEESSGGGHHHHHHHH-------------HH---------TTCC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEeCcHHHHHHHHHhh-------------hc---------cCcc
Confidence 6999999999998 6999999999999965 455556533222111111 11 2456
Q ss_pred EEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCC-------cc----cCHHHHHHHHHHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITK-------FD----ERYDVAFGINTLGAIHLVNFAK 149 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~-------f~----~~~~~~~~~Nv~gt~~ll~~a~ 149 (570)
.++.+|+++ ++..+.++ ..+|++||+|+... +. +.+...+++|+.++..+.+.+.
T Consensus 61 ~~~~~D~~~-------~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~ 133 (256)
T d1ulua_ 61 LLFRADVTQ-------DEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAE 133 (256)
T ss_dssp EEEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred cccccccCC-------HHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHH
Confidence 789999995 32233443 36999999998642 11 2356678999999999998876
Q ss_pred Hc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 150 KC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 150 ~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
.. .+-.++|.+||....... ...
T Consensus 134 ~~~~~~G~Iv~isS~~~~~~~--------------------------------------------------------~~~ 157 (256)
T d1ulua_ 134 PLLREGGGIVTLTYYASEKVV--------------------------------------------------------PKY 157 (256)
T ss_dssp TTEEEEEEEEEEECGGGTSBC--------------------------------------------------------TTC
T ss_pred HHhccCCEEEEEeehHhcCCC--------------------------------------------------------CCc
Confidence 43 233578999987764321 124
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecc
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVI 303 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~V 303 (570)
..|..||+..+.+.+.. ..|+.+..|.|+.|..+.....+.. ......+.... | ..-+.
T Consensus 158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~-------~~~~~~~~~~~----p-----l~R~~ 221 (256)
T d1ulua_ 158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-------TKMYDRVAQTA----P-----LRRNI 221 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C-------HHHHHHHHHHS----T-----TSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh-------HHHHHHHHhcC----C-----CCCCc
Confidence 67999999999988764 5689999999999876543222111 11111111111 1 01134
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 304 PVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 304 pVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..+|+|++++.++.+... --.|+++.+.+|
T Consensus 222 ~pedvA~~v~fL~S~~s~-~itG~~i~VDGG 251 (256)
T d1ulua_ 222 TQEEVGNLGLFLLSPLAS-GITGEVVYVDAG 251 (256)
T ss_dssp CHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhC-CccCCeEEECcC
Confidence 568999999988864332 234788888776
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.2e-12 Score=124.39 Aligned_cols=170 Identities=14% Similarity=0.165 Sum_probs=118.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+||+|||||||+.||++++++|+++|.. |++..|+.. ..+.+.+++ ++..+ ..++.+
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~---Vv~~~r~~~---~l~~~~~~l---------~~~~~-------~~~~~~ 65 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLK---VVGCARTVG---NIEELAAEC---------KSAGY-------PGTLIP 65 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH---HHHHHHHHH---------HHTTC-------SSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH---HHHHHHHHH---------HhcCC-------CceEEE
Confidence 79999999999999999999999999964 567777532 222222222 22211 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-c---
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-C--- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~--- 151 (570)
+.+|+++ +++ .+.++ ..+|++||+|+.... .+.++..+++|+.|+..+.+.+.+ +
T Consensus 66 ~~~Dls~------~~~-v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~ 138 (257)
T d1xg5a_ 66 YRCDLSN------EED-ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER 138 (257)
T ss_dssp EECCTTC------HHH-HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEccCCC------HHH-HHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHh
Confidence 9999995 233 33433 368999999998643 245788899999999888777643 2
Q ss_pred c-CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 V-KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 ~-~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
+ +-.++|.+||........ + .....
T Consensus 139 ~~~~g~Ii~isS~~~~~~~p-------~-----------------------------------------------~~~~~ 164 (257)
T d1xg5a_ 139 NVDDGHIININSMSGHRVLP-------L-----------------------------------------------SVTHF 164 (257)
T ss_dssp TCCSCEEEEECCGGGTSCCS-------C-----------------------------------------------GGGHH
T ss_pred ccCCCceEEEechHhcCCCC-------C-----------------------------------------------cccHH
Confidence 1 235899999987542210 0 01245
Q ss_pred HHHHHHHHHHHHHHh-------cCCCcEEEEeccccccC
Q 008315 231 YVFTKTMGEMIMQQS-------KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-------~~~lp~~IvRPsiV~g~ 262 (570)
|+.+|+..+.+.+.. ..++.+..|-|+.+-..
T Consensus 165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~ 203 (257)
T d1xg5a_ 165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 203 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence 999999999887543 45799999999887553
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.44 E-value=1.2e-11 Score=121.33 Aligned_cols=233 Identities=13% Similarity=0.128 Sum_probs=146.1
Q ss_pred hhhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 6 VVEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 6 i~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-..-++||++|||||||-||+++++.|++.|.+ |++..|+... ..+.+.++ +++. ..
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~---Vvi~~~~~~~--~~~~~~~~---------~~~~---------g~ 68 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCK---VIVNYANSTE--SAEEVVAA---------IKKN---------GS 68 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHH---------HHHT---------TC
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCchH--HHHHHHHH---------HHhh---------CC
Confidence 344589999999999999999999999999965 4566565332 12222211 1211 25
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK- 150 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~- 150 (570)
++.++.+|+++ ++..+.++ ..+|+++|+|+..... +.++..+++|+.|+..+++++..
T Consensus 69 ~~~~~~~D~~~-------~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 141 (272)
T d1g0oa_ 69 DAACVKANVGV-------VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 141 (272)
T ss_dssp CEEEEECCTTC-------HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceeeEeCCCCC-------HHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence 68899999995 33233333 3689999999976432 34677899999999999998865
Q ss_pred ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 151 ~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
|..-.+.+.++|........ .....
T Consensus 142 m~~~g~~i~i~s~~~~~~~~-------------------------------------------------------~~~~~ 166 (272)
T d1g0oa_ 142 LEIGGRLILMGSITGQAKAV-------------------------------------------------------PKHAV 166 (272)
T ss_dssp SCTTCEEEEECCGGGTCSSC-------------------------------------------------------SSCHH
T ss_pred cccccccccccccccccccc-------------------------------------------------------cchhh
Confidence 33345677777655322110 23457
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCC-CCc---cccccchHHHHH-HHhcCCCceeecCCCcee
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPF-PGW---VEDLKTINALFV-ASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~-~gw---~~~~~~~~~~i~-~~~~G~~~~~~~~~~~~~ 300 (570)
|+.||+..+.+++.. ..++.+..|.|+.|-.+..... ..+ .+... ...... ...... | ..
T Consensus 167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----P-----lg 236 (272)
T d1g0oa_ 167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLS-NEEVDEYAAVQWS----P-----LR 236 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCC-HHHHHHHHHHHSC----T-----TC
T ss_pred HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccc-hHHHHHHHHHccC----C-----CC
Confidence 999999998888654 5689999999999865321000 000 00000 001100 011110 0 11
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
-+...+|||++++.++.... .--+|.+..+.+|
T Consensus 237 R~~~peevA~~v~fL~s~~s-~~itG~~i~vDGG 269 (272)
T d1g0oa_ 237 RVGLPIDIARVVCFLASNDG-GWVTGKVIGIDGG 269 (272)
T ss_dssp SCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchh-cCccCceEeECCC
Confidence 24567899999999886433 2234778888776
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.43 E-value=1.3e-12 Score=126.04 Aligned_cols=215 Identities=13% Similarity=0.130 Sum_probs=141.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++|||||+.||++++++|+++|.. |++..|+.+ ++.+ +.++. ..++.+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~---V~~~~r~~~------~~~~----------~~~~~--------~~~~~~ 55 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGAS---LVAVDREER------LLAE----------AVAAL--------EAEAIA 55 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCE---EEEEESCHH------HHHH----------HHHTC--------CSSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCHH------HHHH----------HHHHc--------CCceEE
Confidence 68999999999999999999999999964 577777642 2221 11111 357889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc-cCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC-VKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~-~~l 154 (570)
+.+|+++ ++..++++ .++|++||+|+..... +.++..+++|+.++..+.+++... .+-
T Consensus 56 ~~~Dls~-------~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~ 128 (241)
T d2a4ka1 56 VVADVSD-------PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG 128 (241)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred EEecCCC-------HHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 9999995 33333433 3699999999875321 457788999999999999987653 343
Q ss_pred eEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHH
Q 008315 155 KVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFT 234 (570)
Q Consensus 155 k~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~s 234 (570)
+.++.+||.+..... ....|+.+
T Consensus 129 ~~i~~~ss~a~~~~~---------------------------------------------------------~~~~Y~~s 151 (241)
T d2a4ka1 129 GSLVLTGSVAGLGAF---------------------------------------------------------GLAHYAAG 151 (241)
T ss_dssp CEEEEECCCTTCCHH---------------------------------------------------------HHHHHHHC
T ss_pred cceeecccccccccc---------------------------------------------------------Cccccchh
Confidence 455555554322110 12469999
Q ss_pred HHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHH
Q 008315 235 KTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVV 309 (570)
Q Consensus 235 K~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva 309 (570)
|+..|.+.+.. ..++.+..|.|+.|-.+..+ +. +......+.+.. + ..-+.-.+|+|
T Consensus 152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~-------~~--~~~~~~~~~~~~----p-----~~r~~~p~dva 213 (241)
T d2a4ka1 152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA-------GL--PPWAWEQEVGAS----P-----LGRAGRPEEVA 213 (241)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT-------TS--CHHHHHHHHHTS----T-----TCSCBCHHHHH
T ss_pred hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH-------hh--hHhHHHHHHhCC----C-----CCCCcCHHHHH
Confidence 99999988764 45799999999998554321 11 111222222211 1 11244679999
Q ss_pred HHHHHHHHHhcCCCCCCceEEeccC
Q 008315 310 NAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 310 ~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+++..++.+... --.|++..+.+|
T Consensus 214 ~~v~fL~S~~s~-~itG~~i~vDGG 237 (241)
T d2a4ka1 214 QAALFLLSEESA-YITGQALYVDGG 237 (241)
T ss_dssp HHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHhcchhC-CCcCceEEeCCC
Confidence 999998864332 224778877776
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.5e-12 Score=125.76 Aligned_cols=166 Identities=14% Similarity=0.117 Sum_probs=118.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.+||+++||||++.||++++++|++.|. +|++..|++.. .+.+.+++ ++ . ..++..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~---~V~l~~r~~~~---l~~~~~~~---------~~-~--------~~~~~~ 60 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKS---KLVLWDINKHG---LEETAAKC---------KG-L--------GAKVHT 60 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHH---------HH-T--------TCCEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHH---------Hh-c--------CCcEEE
Confidence 6899999999999999999999999995 56788886432 22222222 11 1 257899
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~ 152 (570)
+.+|++++ +..+.++ ..+|++||+||..... +.++..+++|+.|+..+.+.+.. | .
T Consensus 61 ~~~Dvs~~-------~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~ 133 (244)
T d1yb1a_ 61 FVVDCSNR-------EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN 133 (244)
T ss_dssp EECCTTCH-------HHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred EEeeCCCH-------HHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc
Confidence 99999963 3333333 3699999999986542 34677899999999999887754 3 2
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||........ ....|+
T Consensus 134 ~~G~Iv~isS~~~~~~~~--------------------------------------------------------~~~~Y~ 157 (244)
T d1yb1a_ 134 NHGHIVTVASAAGHVSVP--------------------------------------------------------FLLAYC 157 (244)
T ss_dssp TCEEEEEECCCC-CCCHH--------------------------------------------------------HHHHHH
T ss_pred CCceEEEeecchhcCCCC--------------------------------------------------------CcHHHH
Confidence 446899999987643210 124699
Q ss_pred HHHHHHHHHHHHh--------cCCCcEEEEeccccccC
Q 008315 233 FTKTMGEMIMQQS--------KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 233 ~sK~~aE~~v~~~--------~~~lp~~IvRPsiV~g~ 262 (570)
.||+..+.+.+.. ..|+.+..+.|+.|-.+
T Consensus 158 asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 158 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 9999877776653 14799999999988553
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.42 E-value=1.5e-12 Score=125.77 Aligned_cols=218 Identities=13% Similarity=0.155 Sum_probs=141.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
+.|||||||+.||++++++|+++|..| ++..++.. ...+.+.+++ ++ . ..++.++.+
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V---~i~~~~~~--~~~~~~~~~~---------~~-~--------g~~~~~~~~ 58 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKV---LVNYARSA--KAAEEVSKQI---------EA-Y--------GGQAITFGG 58 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEE---EEEESSCH--HHHHHHHHHH---------HH-H--------TCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEE---EEEeCCCH--HHHHHHHHHH---------HH-c--------CCcEEEEeC
Confidence 479999999999999999999999654 45444321 1122222111 11 1 257889999
Q ss_pred cCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cCce
Q 008315 93 DISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VKLK 155 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk 155 (570)
|+++ ++..+.++ ..+|++||+|+..... +.++..+++|+.|+..+.+.+.. | .+-.
T Consensus 59 Dv~~-------~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G 131 (244)
T d1edoa_ 59 DVSK-------EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG 131 (244)
T ss_dssp CTTS-------HHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCC-------HHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCc
Confidence 9995 33333433 3699999999976432 45788899999999999888754 2 2446
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|++||....... .....|+.||
T Consensus 132 ~IVnisS~~~~~~~--------------------------------------------------------~~~~~Y~asK 155 (244)
T d1edoa_ 132 RIINIASVVGLIGN--------------------------------------------------------IGQANYAAAK 155 (244)
T ss_dssp EEEEECCTHHHHCC--------------------------------------------------------TTCHHHHHHH
T ss_pred EEEEEcChhhcCCC--------------------------------------------------------CCCHHHHHHH
Confidence 89999997654221 1235799999
Q ss_pred HHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHH
Q 008315 236 TMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVN 310 (570)
Q Consensus 236 ~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ 310 (570)
+..+.+.+.. ..|+.+..|-|+.|-.+..+.. . ......+.. . .| ..-+.-.+|+|+
T Consensus 156 aal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~---~------~~~~~~~~~-~---~p-----l~R~~~p~dvA~ 217 (244)
T d1edoa_ 156 AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---G------EDMEKKILG-T---IP-----LGRTGQPENVAG 217 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---C------HHHHHHHHT-S---CT-----TCSCBCHHHHHH
T ss_pred HHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh---h------HHHHHHHHh-c---CC-----CCCCcCHHHHHH
Confidence 9999888754 5589999999998865322111 0 111111111 1 11 112455789999
Q ss_pred HHHHHHHHhcCCCCCCceEEeccC
Q 008315 311 AMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 311 aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
++...+......--.|++..+.+|
T Consensus 218 ~v~fLa~S~~a~~itG~~i~vdGG 241 (244)
T d1edoa_ 218 LVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp HHHHHHHCSGGGGCCSCEEEESTT
T ss_pred HHHHHHCCchhcCCcCCeEEeCCC
Confidence 998876322222224788888776
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.40 E-value=1.1e-11 Score=120.66 Aligned_cols=227 Identities=15% Similarity=0.118 Sum_probs=141.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+||||||||-||+++++.|++.|++| ++..|+... ..+++.+++.+ . ..++..
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~V---vi~~~~~~~--~~~~~~~~~~~----------~--------g~~~~~ 60 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASV---VVNYGSSSK--AAEEVVAELKK----------L--------GAQGVA 60 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEE---EEEESSCHH--HHHHHHHHHHH----------T--------TCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEE---EEEcCCChH--HHHHHHHHHHH----------c--------CCCceE
Confidence 589999999999999999999999999754 555554322 22232222211 1 257889
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-ccCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CVKL 154 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~~l 154 (570)
+.+|+++ ++..+.++ ..+|++||+||..... +.++..+++|+.++..+++.+.. |++-
T Consensus 61 ~~~D~~~-------~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~ 133 (259)
T d1ja9a_ 61 IQADISK-------PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG 133 (259)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE
T ss_pred ecCCCCC-------HHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC
Confidence 9999995 33233433 3699999999986432 34678899999999999998865 3333
Q ss_pred eEEEEEecccc-cCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHH
Q 008315 155 KVFVHVSTAYV-AGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVF 233 (570)
Q Consensus 155 k~fV~vSTa~v-~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~ 233 (570)
.+.+.++|... .... .....|..
T Consensus 134 g~~iii~s~~~~~~~~--------------------------------------------------------~~~~~Y~a 157 (259)
T d1ja9a_ 134 GRIILTSSIAAVMTGI--------------------------------------------------------PNHALYAG 157 (259)
T ss_dssp EEEEEECCGGGTCCSC--------------------------------------------------------CSCHHHHH
T ss_pred CcccccccccccccCC--------------------------------------------------------CCchhHHH
Confidence 45655655432 2111 12357999
Q ss_pred HHHHHHHHHHHh-----cCCCcEEEEeccccccCCC------CCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 234 TKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK------EPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 234 sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~------~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
||+..+.+++.. ..++.+..|.|+.|-.+.. .+...+.. .....+...+.... ...-+
T Consensus 158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---------pl~R~ 226 (259)
T d1ja9a_ 158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKG--MPQEKIDEGLANMN---------PLKRI 226 (259)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTT--CCHHHHHHHHHHTS---------TTSSC
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhccc--CCHHHHHHHHHhCC---------CCCCC
Confidence 998888887654 4589999999999864311 00000000 00111111111111 11124
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.-.+|||++++.++.+... --+|.+..+.+|
T Consensus 227 g~p~eVa~~v~fL~S~~a~-~itG~~i~vDGG 257 (259)
T d1ja9a_ 227 GYPADIGRAVSALCQEESE-WINGQVIKLTGG 257 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhc-CCcCceEEeCCC
Confidence 5678999999988864432 224788888765
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.39 E-value=1.1e-11 Score=119.21 Aligned_cols=166 Identities=17% Similarity=0.214 Sum_probs=116.2
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCcc----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVK----KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~----~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.||||||++.||++++++|.++|..+. .|++..|++.. .+.+.+++. +. ..++.+
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~---l~~~~~~~~---------~~---------g~~~~~ 61 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD---LEKISLECR---------AE---------GALTDT 61 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHH---HHHHHHHHH---------TT---------TCEEEE
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHH---HHHHHHHHH---------hc---------CCcEEE
Confidence 489999999999999999999997631 24556664322 222222221 11 256888
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---c
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---V 152 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~ 152 (570)
+.+|+++ ++..+.++ ..+|++||+||...+. +.++..+++|+.|+..+.+.+... .
T Consensus 62 ~~~Dvt~-------~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~ 134 (240)
T d2bd0a1 62 ITADISD-------MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ 134 (240)
T ss_dssp EECCTTS-------HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------HHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc
Confidence 9999995 33233333 3699999999986432 457888999999999998877542 1
Q ss_pred CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHH
Q 008315 153 KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYV 232 (570)
Q Consensus 153 ~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~ 232 (570)
+-.++|.+||....... .....|+
T Consensus 135 ~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y~ 158 (240)
T d2bd0a1 135 HSGHIFFITSVAATKAF--------------------------------------------------------RHSSIYC 158 (240)
T ss_dssp TCEEEEEECCGGGTSCC--------------------------------------------------------TTCHHHH
T ss_pred CCCceEEEechhhcCCC--------------------------------------------------------CCChHHH
Confidence 34689999988764321 1235799
Q ss_pred HHHHHHHHHHHHh-----cCCCcEEEEeccccccCC
Q 008315 233 FTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTY 263 (570)
Q Consensus 233 ~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~ 263 (570)
.||+..+.+.+.. ..++.+..|.|+.|-.+.
T Consensus 159 asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~ 194 (240)
T d2bd0a1 159 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 194 (240)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence 9998888777653 457999999999986543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.39 E-value=2.7e-11 Score=116.95 Aligned_cols=173 Identities=16% Similarity=0.171 Sum_probs=115.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|+|||||||+.||.+++++|++....-.+|++..|++......+.+. +. ..++.++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~-------------~~---------~~~~~~~~ 59 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLA-------------KN---------HSNIHILE 59 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHH-------------HH---------CTTEEEEE
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-------------hc---------CCcEEEEE
Confidence 379999999999999999999864333357789999876653322211 11 26789999
Q ss_pred ccCCCCCCCCChhhhHHHH-----hCCccEEEEcCccCCcc--------cCHHHHHHHHHHHHHHHHHHHHHc-------
Q 008315 92 GDISSEDLGLKDSNLKEEL-----WNELDVMVNSAAITKFD--------ERYDVAFGINTLGAIHLVNFAKKC------- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l-----~~~vdiVih~Aa~v~f~--------~~~~~~~~~Nv~gt~~ll~~a~~~------- 151 (570)
+|+++++- -+...+.+ ...+|++||+||..... +.++..+++|+.|+..+.+.+...
T Consensus 60 ~Dvs~~~~---v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~ 136 (248)
T d1snya_ 60 IDLRNFDA---YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA 136 (248)
T ss_dssp CCTTCGGG---HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccHHH---HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhc
Confidence 99996421 11111111 13589999999974321 236678999999999988876432
Q ss_pred -------cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccccccc
Q 008315 152 -------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKI 224 (570)
Q Consensus 152 -------~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 224 (570)
.+-.++|.+||....-.. .+.
T Consensus 137 ~~~~~~~~~~g~ii~i~S~~g~~~~------~~~---------------------------------------------- 164 (248)
T d1snya_ 137 NESQPMGVGRAAIINMSSILGSIQG------NTD---------------------------------------------- 164 (248)
T ss_dssp TTTSCSSTTTCEEEEECCGGGCSTT------CCS----------------------------------------------
T ss_pred cccccccccccccccccccccccCC------CCC----------------------------------------------
Confidence 123578888886532110 000
Q ss_pred CCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 225 HGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 225 ~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
+....|..||+....+.+.. ..++.+..|.|+.|-.+
T Consensus 165 -~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 165 -GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 12347999999888877653 55799999999988554
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=2.3e-12 Score=124.56 Aligned_cols=221 Identities=10% Similarity=0.063 Sum_probs=143.3
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++|||||+|-||++++++|+++|.+ |++..|++ ++++ ++. + ...+..
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~---Vi~~~r~~------~~l~-~~~---------~----------~~~~~~ 54 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAK---VIATDINE------SKLQ-ELE---------K----------YPGIQT 54 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCE---EEEEESCH------HHHG-GGG---------G----------STTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCH------HHHH-HHH---------h----------ccCCce
Confidence 79999999999999999999999999964 56777753 1222 111 0 135677
Q ss_pred EEccCCCCCCCCChhhhHHH---HhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHHc---cCceE
Q 008315 90 VAGDISSEDLGLKDSNLKEE---LWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKKC---VKLKV 156 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~---l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~ 156 (570)
...|+.. ++..+. .+..+|++||+||..... +.++..+++|+.|+..+.+.+... .+-.+
T Consensus 55 ~~~d~~~-------~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~ 127 (245)
T d2ag5a1 55 RVLDVTK-------KKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGN 127 (245)
T ss_dssp EECCTTC-------HHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred eeeeccc-------cccccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCce
Confidence 7888873 333333 335799999999987542 457888999999999999887642 23458
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....-. ++ .....|+.+|+
T Consensus 128 Ii~isS~~~~~~--------~~-----------------------------------------------~~~~~Y~~sKa 152 (245)
T d2ag5a1 128 IINMSSVASSVK--------GV-----------------------------------------------VNRCVYSTTKA 152 (245)
T ss_dssp EEEECCSBTTTB--------CC-----------------------------------------------TTBHHHHHHHH
T ss_pred eeeeechhhccC--------Cc-----------------------------------------------cchhHHHHHHH
Confidence 999987653210 00 13467999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHH
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNA 311 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~a 311 (570)
..+.+++.. ..|+.+..|.|+.|-.+...- +.............+.... ...-+.-.+|+|++
T Consensus 153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~---------pl~R~~~pedva~~ 220 (245)
T d2ag5a1 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLKRQ---------KTGRFATAEEIAML 220 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHh---hhhhhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHH
Confidence 999988764 568999999999886532210 0000011111111111111 01123456899999
Q ss_pred HHHHHHHhcCCCCCCceEEeccC
Q 008315 312 MIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 312 ii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..++.+... --.|+++.+.+|
T Consensus 221 v~fL~s~~s~-~iTG~~i~VDGG 242 (245)
T d2ag5a1 221 CVYLASDESA-YVTGNPVIIDGG 242 (245)
T ss_dssp HHHHHSGGGT-TCCSCEEEECTT
T ss_pred HHHHhChhhC-CCcCceEEeCCC
Confidence 9998864332 224788888776
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=4.6e-12 Score=125.13 Aligned_cols=170 Identities=12% Similarity=0.122 Sum_probs=119.7
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
.|.|||||||+.||++++++|.+.|..|..|+...|........+...+++. ....++..+.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~------------------~~~~~~~~~~ 63 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA------------------CPPGSLETLQ 63 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT------------------CCTTSEEEEE
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh------------------ccCCceEEEe
Confidence 4678999999999999999999999887666666665433322211111110 0135789999
Q ss_pred ccCCCCCCCCChhhhHHHHhC-----CccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c--cCceE
Q 008315 92 GDISSEDLGLKDSNLKEELWN-----ELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C--VKLKV 156 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~-----~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk~ 156 (570)
+|+++ .+..+.+++ .+|+++|+|+..... +.++..+++|+.|+.++.+++.. | .+-.+
T Consensus 64 ~Dv~~-------~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~ 136 (285)
T d1jtva_ 64 LDVRD-------SKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGR 136 (285)
T ss_dssp CCTTC-------HHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred ccccc-------hHhhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCc
Confidence 99995 333334432 489999999986432 45777899999999999887744 2 24468
Q ss_pred EEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHH
Q 008315 157 FVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKT 236 (570)
Q Consensus 157 fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~ 236 (570)
+|.+||....... .....|+.||+
T Consensus 137 Iv~isS~~g~~~~--------------------------------------------------------~~~~~Y~asKa 160 (285)
T d1jtva_ 137 VLVTGSVGGLMGL--------------------------------------------------------PFNDVYCASKF 160 (285)
T ss_dssp EEEEEEGGGTSCC--------------------------------------------------------TTCHHHHHHHH
T ss_pred eEEEechhhcCCC--------------------------------------------------------CCchHHHHHHH
Confidence 9999998654321 12457999999
Q ss_pred HHHHHHHHh-----cCCCcEEEEeccccccC
Q 008315 237 MGEMIMQQS-----KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 237 ~aE~~v~~~-----~~~lp~~IvRPsiV~g~ 262 (570)
..+.+.+.. ..|+.+..|.||.|-.+
T Consensus 161 al~~l~~~la~El~~~gIrVn~V~PG~v~T~ 191 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence 888877653 55899999999998654
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.38 E-value=5.3e-12 Score=122.25 Aligned_cols=171 Identities=11% Similarity=0.126 Sum_probs=111.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
|+.|+|||||||+.||.+++++|+++|..+ +|++..|+..... .+ ++. ...++.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~-~Vi~~~R~~~~~~---~l-------------~~~--------~~~~~~~ 55 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKAT---EL-------------KSI--------KDSRVHV 55 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCH---HH-------------HTC--------CCTTEEE
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCC-EEEEEeCCHHHHH---HH-------------HHh--------hCCceEE
Confidence 467999999999999999999999998653 5677777754321 11 111 1367999
Q ss_pred EEccCCCCCCCCChhhhHHHHh-------C--CccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc-
Q 008315 90 VAGDISSEDLGLKDSNLKEELW-------N--ELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~-------~--~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~- 151 (570)
+.+|+++ ++..+.++ . .+|++||+||.... . +.++..+++|+.|+..+.+.+...
T Consensus 56 ~~~Dvs~-------~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l 128 (250)
T d1yo6a1 56 LPLTVTC-------DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLL 128 (250)
T ss_dssp EECCTTC-------HHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHH
T ss_pred EEEecCC-------HHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 9999995 32222222 1 38999999997421 1 236778999999999988876431
Q ss_pred ---c----------CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcc
Q 008315 152 ---V----------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 152 ---~----------~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
+ ...+++.+|+......... ....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~----------------------------------------- 165 (250)
T d1yo6a1 129 KNAASKESGDQLSVSRAAVITISSGLGSITDNT--SGSA----------------------------------------- 165 (250)
T ss_dssp HHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--STTS-----------------------------------------
T ss_pred HHhccCCCCccccceeccccccccccccccCCc--cccc-----------------------------------------
Confidence 0 1134566665544322110 0000
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEecccccc
Q 008315 219 TERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSG 261 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g 261 (570)
......|..||+....+.+.. ..++.+..+-||.|-.
T Consensus 166 ------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T 207 (250)
T d1yo6a1 166 ------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT 207 (250)
T ss_dssp ------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCC
Confidence 012346999999988887654 5579999999887754
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.37 E-value=3.1e-12 Score=127.41 Aligned_cols=212 Identities=16% Similarity=0.191 Sum_probs=136.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc------ccHHHHHHHHHhhhhhHHHHHhhhcccccccc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT------ESAALRFQNEVLAKDLFNVLKEKWGTRLNSFI 83 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~------~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~ 83 (570)
++||+++||||++.||++++++|+++|.. |++..|.... ....+.+.+++.
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~---Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-------------------- 61 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGAL---VVVNDLGGDFKGVGKGSSAADKVVEEIR-------------------- 61 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCE---EEEECCCBCTTSCBCCSHHHHHHHHHHH--------------------
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCchhhhhhhhHHHHHHHHHHHh--------------------
Confidence 68999999999999999999999999964 4566554321 222222221111
Q ss_pred cCceEEEEccCCCCCCCCChhhhHHHH---hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-c-
Q 008315 84 SEKITFVAGDISSEDLGLKDSNLKEEL---WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-C- 151 (570)
Q Consensus 84 ~~kv~~v~gDl~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~- 151 (570)
.+...+..|+++.+- .+...+.+ +..+|++||+||..... +.++..+++|+.|+..+.+.+.. |
T Consensus 62 -~~~~~~~~d~~~~~~---~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 137 (302)
T d1gz6a_ 62 -RRGGKAVANYDSVEA---GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMK 137 (302)
T ss_dssp -HTTCEEEEECCCGGG---HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hcccccccccchHHH---HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHH
Confidence 223345567774310 11222222 23699999999986432 45788899999999999998754 2
Q ss_pred -cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 152 -VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 152 -~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
.+-.++|.+||....... .....
T Consensus 138 ~~~~G~IV~isS~~~~~~~--------------------------------------------------------~~~~~ 161 (302)
T d1gz6a_ 138 KQNYGRIIMTASASGIYGN--------------------------------------------------------FGQAN 161 (302)
T ss_dssp HHTCEEEEEECCHHHHHCC--------------------------------------------------------TTCHH
T ss_pred hCCCcEEEEeCChhhcCCC--------------------------------------------------------CCcHH
Confidence 134689999997654211 12357
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+.+.. ..|+.+..|-|+.+........+ ..+ ...+..
T Consensus 162 Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~---------~~~-------------------~~~~~P 213 (302)
T d1gz6a_ 162 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP---------EDL-------------------VEALKP 213 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC---------HHH-------------------HHHSCG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc---------Hhh-------------------HhcCCH
Confidence 999999988887654 56899999999977443221110 111 112234
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|++++.++.... .-.|+++.+.+|
T Consensus 214 edvA~~v~fL~S~~a--~itG~~i~vdGG 240 (302)
T d1gz6a_ 214 EYVAPLVLWLCHESC--EENGGLFEVGAG 240 (302)
T ss_dssp GGTHHHHHHHTSTTC--CCCSCEEEEETT
T ss_pred HHHHHHHHHHcCCCc--CCCCcEEEeCCC
Confidence 789999988764322 235788887766
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.34 E-value=1.7e-11 Score=119.21 Aligned_cols=170 Identities=14% Similarity=0.173 Sum_probs=119.7
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHH---hCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhccccccccc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILR---VQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFIS 84 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~---~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~ 84 (570)
+-++||.++|||||+.||++++++|.+ +| .+|++..|+... .+.+.++ |+.+.+ .
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G---~~Vv~~~r~~~~---l~~~~~~---------l~~~~~-------~ 59 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPG---SVMLVSARSESM---LRQLKEE---------LGAQQP-------D 59 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTT---CEEEEEESCHHH---HHHHHHH---------HHHHCT-------T
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCC---CEEEEEECCHHH---HHHHHHH---------HHhhcC-------C
Confidence 346899999999999999999999986 45 456788885422 2222222 222222 2
Q ss_pred CceEEEEccCCCCCCCCChhhhHHHHhC-----------CccEEEEcCccCC------cc----cCHHHHHHHHHHHHHH
Q 008315 85 EKITFVAGDISSEDLGLKDSNLKEELWN-----------ELDVMVNSAAITK------FD----ERYDVAFGINTLGAIH 143 (570)
Q Consensus 85 ~kv~~v~gDl~~~~lgls~~~~~~~l~~-----------~vdiVih~Aa~v~------f~----~~~~~~~~~Nv~gt~~ 143 (570)
.++.++.+|+++ ++..+.+++ .+|+++|+||... +. +.++..+++|+.|+..
T Consensus 60 ~~~~~~~~Dvs~-------~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~ 132 (259)
T d1oaaa_ 60 LKVVLAAADLGT-------EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLC 132 (259)
T ss_dssp SEEEEEECCTTS-------HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHH
T ss_pred ceEEEEEccCCC-------HHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHH
Confidence 478999999995 333334431 4679999998642 11 3467789999999999
Q ss_pred HHHHHHHc-cC----ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcc
Q 008315 144 LVNFAKKC-VK----LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 144 ll~~a~~~-~~----lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
+.+.+... .. -.++|.+||.......
T Consensus 133 l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~------------------------------------------------- 163 (259)
T d1oaaa_ 133 LTSGTLNAFQDSPGLSKTVVNISSLCALQPY------------------------------------------------- 163 (259)
T ss_dssp HHHHHHHTSCCCTTCEEEEEEECCGGGTSCC-------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCcccccccccccccCCC-------------------------------------------------
Confidence 99988653 21 2478999987654321
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh---cCCCcEEEEeccccccC
Q 008315 219 TERAKIHGWPNTYVFTKTMGEMIMQQS---KENLSLVIIRPTIVSGT 262 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~---~~~lp~~IvRPsiV~g~ 262 (570)
.....|+.||+..+.+.+.. ..++.+..|.|+.|-.+
T Consensus 164 -------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 -------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred -------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 12467999999999887765 66899999999988654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.34 E-value=3.5e-11 Score=119.13 Aligned_cols=224 Identities=12% Similarity=0.104 Sum_probs=139.5
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-|+||+++||||||.||++++++|++.|. +|++..|+..... ...++ +.++. ..++.
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga---~Vii~~r~~~~l~---~~~~~---------l~~~~--------g~~~~ 78 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGA---QCVIASRKMDVLK---ATAEQ---------ISSQT--------GNKVH 78 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCHHHHH---HHHHH---------HHHHH--------SSCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC---EEEEEECCHHHHH---HHHHH---------HHHhc--------CCceE
Confidence 47999999999999999999999999995 4578888643211 11111 22222 25688
Q ss_pred EEEccCCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH----
Q 008315 89 FVAGDISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK---- 150 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~---- 150 (570)
.+.+|+++ ++..+.+ ...+|+++|+|+..... +.+...+.+|..+...+...+..
T Consensus 79 ~~~~D~~~-------~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 151 (294)
T d1w6ua_ 79 AIQCDVRD-------PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK 151 (294)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccC-------hHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccc
Confidence 99999995 3322232 24699999999976442 23556678888887777554322
Q ss_pred ccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCch
Q 008315 151 CVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNT 230 (570)
Q Consensus 151 ~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~ 230 (570)
..+-..++.+|+.+..... .....
T Consensus 152 ~~~~~~i~~~ss~~~~~~~--------------------------------------------------------~~~~~ 175 (294)
T d1w6ua_ 152 AQKGAAFLSITTIYAETGS--------------------------------------------------------GFVVP 175 (294)
T ss_dssp TTCCEEEEEECCTHHHHCC--------------------------------------------------------TTCHH
T ss_pred ccccccccccccchhhhcc--------------------------------------------------------cccch
Confidence 2234556666665543221 12356
Q ss_pred HHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchH
Q 008315 231 YVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPV 305 (570)
Q Consensus 231 Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpV 305 (570)
|+.||+..+.+++.. ..|+.+..|.|+.|-.+..... .+. ........... .+ ..-+.-.
T Consensus 176 YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~---~~~~~~~~~~~----~p-----l~R~~~p 240 (294)
T d1w6ua_ 176 SASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR---LDP---TGTFEKEMIGR----IP-----CGRLGTV 240 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC---------CCT---TSHHHHHHHTT----CT-----TSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhc---cCC---cHHHHHHHhhc----CC-----CCCCCCH
Confidence 999999999988764 5689999999999976533111 110 00111111111 11 1123456
Q ss_pred HHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 306 DMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 306 Ddva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+|+|+++..++.+... --.|++..+.+|
T Consensus 241 ediA~~v~fL~sd~s~-~itG~~i~vDGG 268 (294)
T d1w6ua_ 241 EELANLAAFLCSDYAS-WINGAVIKFDGG 268 (294)
T ss_dssp HHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhc-CCCCcEEEECCC
Confidence 9999999988864332 224789998877
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.33 E-value=2.7e-11 Score=116.05 Aligned_cols=206 Identities=10% Similarity=0.086 Sum_probs=130.5
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+.+||||||||.||++++++|++.|+ +|+++.|.+.... .....+.
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~---~V~~~~~~~~~~~-------------------------------~~~~~~~ 47 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY---TVLNIDLSANDQA-------------------------------DSNILVD 47 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE---EEEEEESSCCTTS-------------------------------SEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCchhcc-------------------------------cccceec
Confidence 46799999999999999999999995 4578888765321 2233445
Q ss_pred ccCCCCCCCCChhhhHHHHh--CCccEEEEcCccCCc----c----cCHHHHHHHHHHHHHHHHHHHHHc-cCceEEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELW--NELDVMVNSAAITKF----D----ERYDVAFGINTLGAIHLVNFAKKC-VKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~--~~vdiVih~Aa~v~f----~----~~~~~~~~~Nv~gt~~ll~~a~~~-~~lk~fV~v 160 (570)
+|....+--....+...... ..+|++||+||.... . +.++..+++|+.|+..+.+++... ++-.++|++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~i 127 (235)
T d1ooea_ 48 GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLT 127 (235)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEe
Confidence 55552110000000111111 358999999996432 1 235667899999999998888653 333689999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||........ ....|+.||+..+.
T Consensus 128 sS~~~~~~~~--------------------------------------------------------~~~~Y~asKaal~~ 151 (235)
T d1ooea_ 128 GAAAAMGPTP--------------------------------------------------------SMIGYGMAKAAVHH 151 (235)
T ss_dssp CCGGGGSCCT--------------------------------------------------------TBHHHHHHHHHHHH
T ss_pred ccHHhcCCcc--------------------------------------------------------cccchHHHHHHHHH
Confidence 9876543221 23579999999999
Q ss_pred HHHHh----c---CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHH
Q 008315 241 IMQQS----K---ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMI 313 (570)
Q Consensus 241 ~v~~~----~---~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii 313 (570)
+.+.. . .++.+..+.|+.+-.+ +......+ .....+++.+++++.++
T Consensus 152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----------------~~~~~~~~---------~~~~~~~~~~~va~~~~ 205 (235)
T d1ooea_ 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----------------MNRKWMPN---------ADHSSWTPLSFISEHLL 205 (235)
T ss_dssp HHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------------HHHHHSTT---------CCGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEEEEEecCcCcCc-----------------chhhhCcC---------CccccCCCHHHHHHHHH
Confidence 98864 1 3567788888876432 11111111 12235688999999987
Q ss_pred HHHHHhcCCCCCCceEEecc
Q 008315 314 VAMVAHAKQPSDANIYHVGS 333 (570)
Q Consensus 314 ~a~~~~~~~~~~~~iyn~~s 333 (570)
..+.........|....+.+
T Consensus 206 ~~l~~~~~~~~tG~~i~v~~ 225 (235)
T d1ooea_ 206 KWTTETSSRPSSGALLKITT 225 (235)
T ss_dssp HHHHCGGGCCCTTCEEEEEE
T ss_pred HHhcCccccCCCceEEEEEe
Confidence 65554433334466676644
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.32 E-value=2.9e-11 Score=115.96 Aligned_cols=201 Identities=12% Similarity=0.097 Sum_probs=129.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+||+||||||||.||++++++|+++|..| +++.|.+.... .....+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V---~~~~~~~~~~~-------------------------------~~~~~~ 46 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWV---ASIDVVENEEA-------------------------------SASVIV 46 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEE---EEEESSCCTTS-------------------------------SEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEE---EEEeCCccccc-------------------------------ccccee
Confidence 58999999999999999999999999654 56656543211 122233
Q ss_pred EccCCCCCCCCChhh-hHH---HHhC--CccEEEEcCccCC----cc----cCHHHHHHHHHHHHHHHHHHHHH-ccCce
Q 008315 91 AGDISSEDLGLKDSN-LKE---ELWN--ELDVMVNSAAITK----FD----ERYDVAFGINTLGAIHLVNFAKK-CVKLK 155 (570)
Q Consensus 91 ~gDl~~~~lgls~~~-~~~---~l~~--~vdiVih~Aa~v~----f~----~~~~~~~~~Nv~gt~~ll~~a~~-~~~lk 155 (570)
..|....+ +.+ ... .... ++|++||+||... +. +.++..+++|+.++..+.+++.. +++-.
T Consensus 47 ~~~~~~~~----~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G 122 (236)
T d1dhra_ 47 KMTDSFTE----QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGG 122 (236)
T ss_dssp CCCSCHHH----HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
T ss_pred ecccCcHH----HHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccccc
Confidence 33333110 111 011 1222 4899999998532 11 34566789999999999998865 34446
Q ss_pred EEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHH
Q 008315 156 VFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTK 235 (570)
Q Consensus 156 ~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK 235 (570)
++|.+||....... .....|+.||
T Consensus 123 ~Iv~isS~~~~~~~--------------------------------------------------------~~~~~Y~asK 146 (236)
T d1dhra_ 123 LLTLAGAKAALDGT--------------------------------------------------------PGMIGYGMAK 146 (236)
T ss_dssp EEEEECCGGGGSCC--------------------------------------------------------TTBHHHHHHH
T ss_pred ceeEEccHHHcCCc--------------------------------------------------------cCCcccHHHH
Confidence 89999997654321 1235799999
Q ss_pred HHHHHHHHHh----c---CCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHH
Q 008315 236 TMGEMIMQQS----K---ENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMV 308 (570)
Q Consensus 236 ~~aE~~v~~~----~---~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdv 308 (570)
+..+.+.+.. . .++.+..|.|+.|..+.. .... + ......++|.+++
T Consensus 147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-----------------~~~~-------~--~~~~~~~~~pe~v 200 (236)
T d1dhra_ 147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-----------------RKSM-------P--EADFSSWTPLEFL 200 (236)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-----------------HHHS-------T--TSCGGGSEEHHHH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-----------------hhhC-------c--cchhhcCCCHHHH
Confidence 9999999875 2 478899999988865321 1111 0 0112346788999
Q ss_pred HHHHHHHHHHhcCCCCCCceEEec
Q 008315 309 VNAMIVAMVAHAKQPSDANIYHVG 332 (570)
Q Consensus 309 a~aii~a~~~~~~~~~~~~iyn~~ 332 (570)
|+.+..++.... ....|.+..+.
T Consensus 201 a~~~~~l~s~~~-~~i~G~~i~v~ 223 (236)
T d1dhra_ 201 VETFHDWITGNK-RPNSGSLIQVV 223 (236)
T ss_dssp HHHHHHHHTTTT-CCCTTCEEEEE
T ss_pred HHHHHHHhCCCc-cCCCCCeEEEE
Confidence 999988775332 22346666553
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=1.8e-10 Score=111.53 Aligned_cols=221 Identities=15% Similarity=0.166 Sum_probs=140.5
Q ss_pred hcCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||+||||||+| .||++++++|+++|.+ |++..|+.+.. +++. ++.. . ..+
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~---V~i~~~~~~~~---~~~~-~~~~---------~---------~~~ 56 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAE---LAFTYQNDKLK---GRVE-EFAA---------Q---------LGS 56 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCE---EEEEESSTTTH---HHHH-HHHH---------H---------TTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCE---EEEEeCCHHHH---HHHH-HHHh---------h---------cCC
Confidence 57999999999998 7999999999999964 46777764322 2222 1111 1 145
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc------------cCHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD------------ERYDVAFGINTLGAIHLVNF 147 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~------------~~~~~~~~~Nv~gt~~ll~~ 147 (570)
...+..|+++ ..+. .... ...|+++|+|+..... +.+.....+|+.+...+++.
T Consensus 57 ~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (258)
T d1qsga_ 57 DIVLQCDVAE------DASI-DTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 129 (258)
T ss_dssp CCEEECCTTC------HHHH-HHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cceeecccch------HHHH-HHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 5677788874 2222 2222 3579999999875332 22455577888888888887
Q ss_pred HHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCC
Q 008315 148 AKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHG 226 (570)
Q Consensus 148 a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 226 (570)
+... .+-..+|++||....... +
T Consensus 130 ~~~~~~~~~~Ii~iss~~~~~~~--------------------------------------------------------~ 153 (258)
T d1qsga_ 130 CRSMLNPGSALLTLSYLGAERAI--------------------------------------------------------P 153 (258)
T ss_dssp HGGGEEEEEEEEEEECGGGTSBC--------------------------------------------------------T
T ss_pred HHHhccCCcEEEEecchhhccCC--------------------------------------------------------C
Confidence 7654 233567888887643211 1
Q ss_pred CCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceee
Q 008315 227 WPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMD 301 (570)
Q Consensus 227 ~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d 301 (570)
....|..||+.-+.+++.. ..++.+..|.|+.|..+..+. ... .......... . .|. .-
T Consensus 154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~~---~~~~~~~~~~-~---~pl-----~R 217 (258)
T d1qsga_ 154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG----IKD---FRKMLAHCEA-V---TPI-----RR 217 (258)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG----STT---HHHHHHHHHH-H---STT-----SS
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc----cch---hhhHHHHHHh-C---CCC-----CC
Confidence 2367999999999988764 567999999999997654321 111 1111111111 0 110 11
Q ss_pred cchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 302 VIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 302 ~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+...+|+|++++.++.+.. .--+|.++.+.+|
T Consensus 218 ~~~peeia~~v~fL~s~~s-~~itG~~i~vDGG 249 (258)
T d1qsga_ 218 TVTIEDVGNSAAFLCSDLS-AGISGEVVHVDGG 249 (258)
T ss_dssp CCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchh-cCccCceEEECcC
Confidence 3557999999988885432 2234788888776
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=8.5e-11 Score=113.33 Aligned_cols=172 Identities=14% Similarity=0.160 Sum_probs=116.1
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||+++|||||+.||++++++|.+.|. +|++..|+...... ..+++ ..+...
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~---~V~~~~r~~~~~~~---~~~~l---------------------~~~~~~ 55 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGA---SAVLLDLPNSGGEA---QAKKL---------------------GNNCVF 55 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEECTTSSHHH---HHHHH---------------------CTTEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC---EEEEEeCChHHHHH---HHHHh---------------------CCCccc
Confidence 5899999999999999999999999996 45788887654321 11111 245677
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-------------ccCHHHHHHHHHHHHHHHHHHHHHc-----
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-------------DERYDVAFGINTLGAIHLVNFAKKC----- 151 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-------------~~~~~~~~~~Nv~gt~~ll~~a~~~----- 151 (570)
...|+.+...--+..+.........|.++++++.... .+.++..+++|+.|+..+.+++...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~ 135 (248)
T d2o23a1 56 APADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 135 (248)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSC
T ss_pred ccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhh
Confidence 7888874210000000001122357888888765321 1346778999999999999988542
Q ss_pred ----cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 152 ----VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 152 ----~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+-.++|++||.+..... ..
T Consensus 136 ~~~~~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~ 159 (248)
T d2o23a1 136 PDQGGQRGVIINTASVAAFEGQ--------------------------------------------------------VG 159 (248)
T ss_dssp CCTTSCCEEEEEECCTHHHHCC--------------------------------------------------------TT
T ss_pred hhccCCceEEEEecchhhccCC--------------------------------------------------------CC
Confidence 022479999998765321 12
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCC
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYK 264 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~ 264 (570)
...|+.||+..+.+.+.. ..++.+..|.|+.|..+..
T Consensus 160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~ 201 (248)
T d2o23a1 160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchh
Confidence 457999999999988764 5579999999999876543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=5.4e-11 Score=116.29 Aligned_cols=173 Identities=14% Similarity=0.135 Sum_probs=114.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++||++||||||+.||++++++|++.|. +|++..|+... .+.+.+++. +.. ..++..
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~---~Vil~~r~~~~---l~~~~~~~~---------~~~--------~~~~~~ 68 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA---HVVVTARSKET---LQKVVSHCL---------ELG--------AASAHY 68 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC---EEEEEESCHHH---HHHHHHHHH---------HHT--------CSEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEECCHHH---HHHHHHHHh---------hhh--------cccchh
Confidence 7899999999999999999999999995 46788886432 122211111 111 256778
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-------cCHHHHHHHHHHHHHHHHHHHHH-cc-CceEEEEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-------ERYDVAFGINTLGAIHLVNFAKK-CV-KLKVFVHV 160 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-------~~~~~~~~~Nv~gt~~ll~~a~~-~~-~lk~fV~v 160 (570)
+..|++++..-....+........+|+++|+|+..... +.++..+++|+.|+..+.+.+.. |+ +-.++|.+
T Consensus 69 ~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~i 148 (269)
T d1xu9a_ 69 IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVV 148 (269)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred hhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEe
Confidence 88888852100000000111234689999999875321 34667799999999998887754 21 22578999
Q ss_pred ecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHH
Q 008315 161 STAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEM 240 (570)
Q Consensus 161 STa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~ 240 (570)
||....... .....|+.||+..+.
T Consensus 149 sS~~~~~~~--------------------------------------------------------p~~~~Y~asKaal~~ 172 (269)
T d1xu9a_ 149 SSLAGKVAY--------------------------------------------------------PMVAAYSASKFALDG 172 (269)
T ss_dssp EEGGGTSCC--------------------------------------------------------TTCHHHHHHHHHHHH
T ss_pred ccchhcCCC--------------------------------------------------------CCchHHHHHHHHHHH
Confidence 887653211 124689999999888
Q ss_pred HHHHh-------cCCCcEEEEecccccc
Q 008315 241 IMQQS-------KENLSLVIIRPTIVSG 261 (570)
Q Consensus 241 ~v~~~-------~~~lp~~IvRPsiV~g 261 (570)
+.+.. ..++.+..+.||.|-.
T Consensus 173 ~~~~La~El~~~~~~I~V~~v~PG~v~T 200 (269)
T d1xu9a_ 173 FFSSIRKEYSVSRVNVSITLCVLGLIDT 200 (269)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred HHHHHHHHhhhcCCCEEEEEEecCcCCC
Confidence 77654 1357788899988744
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.25 E-value=4.2e-11 Score=115.99 Aligned_cols=219 Identities=14% Similarity=0.118 Sum_probs=135.2
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+++||||++.||++++++|.+.|.+ |.+..|+.+.....+... . ..+.+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~---V~i~~r~~~~~~~~~~~~-------------~--------------~~~~~d 51 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHT---VACHDESFKQKDELEAFA-------------E--------------TYPQLK 51 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCE---EEECCGGGGSHHHHHHHH-------------H--------------HCTTSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCE---EEEEECCHHHHHHHHhhh-------------C--------------cEEEec
Confidence 7899999999999999999999964 466667654432211111 0 112356
Q ss_pred CCCCCCCCChhhhHHHH---hCCccEEEEcCccC-C---cc----cCHHHHHHHHHHHHHHHHHHHHH-c--cCceEEEE
Q 008315 94 ISSEDLGLKDSNLKEEL---WNELDVMVNSAAIT-K---FD----ERYDVAFGINTLGAIHLVNFAKK-C--VKLKVFVH 159 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l---~~~vdiVih~Aa~v-~---f~----~~~~~~~~~Nv~gt~~ll~~a~~-~--~~lk~fV~ 159 (570)
+++++- .++..+.+ +..+|++||+||.. . +. +.++..+++|+.|+..+.+.+.. | .+-.++|+
T Consensus 52 v~~~~~---~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~ 128 (252)
T d1zmta1 52 PMSEQE---PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIF 128 (252)
T ss_dssp ECCCCS---HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCHHH---HHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeec
Confidence 664320 11222222 24799999999864 2 22 34778899999999999887643 2 13468999
Q ss_pred EecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHH
Q 008315 160 VSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGE 239 (570)
Q Consensus 160 vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE 239 (570)
+||....... .....|+.||+..+
T Consensus 129 isS~~~~~~~--------------------------------------------------------~~~~~Y~asKaal~ 152 (252)
T d1zmta1 129 ITSATPFGPW--------------------------------------------------------KELSTYTSARAGAC 152 (252)
T ss_dssp ECCSTTTSCC--------------------------------------------------------TTCHHHHHHHHHHH
T ss_pred cccccccccc--------------------------------------------------------ccccccccccccHH
Confidence 9998654321 12357999999999
Q ss_pred HHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccc--ccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHH
Q 008315 240 MIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVED--LKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAM 312 (570)
Q Consensus 240 ~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~--~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~ai 312 (570)
.+.+.. ..++.+..|.|+.|-.+... .+... ..........+.+.. + ..-+...+|+|+++
T Consensus 153 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~~~~e~~~~~~~~~----p-----l~R~g~pedvA~~v 220 (252)
T d1zmta1 153 TLANALSKELGEYNIPVFAIGPNYLHSEDSP---YFYPTEPWKTNPEHVAHVKKVT----A-----LQRLGTQKELGELV 220 (252)
T ss_dssp HHHHHHHHHHGGGTCCEEEEEESSBCCBTCC---SSCBHHHHTTCHHHHHHHHHHS----S-----SSSCBCHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEecCCCcCcchh---hhhhcccccCCHHHHHHHHhcC----C-----CCCCcCHHHHHHHH
Confidence 887754 56899999999998765432 11110 000111111111111 1 01135678999999
Q ss_pred HHHHHHhcCCCCCCceEEeccC
Q 008315 313 IVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 313 i~a~~~~~~~~~~~~iyn~~s~ 334 (570)
+..+.+... --.|++..+.+|
T Consensus 221 ~fL~S~~s~-~iTG~~i~vdGG 241 (252)
T d1zmta1 221 AFLASGSCD-YLTGQVFWLAGG 241 (252)
T ss_dssp HHHHTTSCG-GGTTCEEEESTT
T ss_pred HHHhCchhc-CCcCCeEEECCC
Confidence 988853221 124788988877
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.19 E-value=9.7e-10 Score=107.23 Aligned_cols=221 Identities=15% Similarity=0.120 Sum_probs=130.8
Q ss_pred hcCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+++||++|||||+| .||.+++++|+++|.+ |++..|+.... ++++ ++. ++ ...
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~---V~i~~r~~~~~---~~~~-~l~---------~~---------~~~ 56 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT---LAFTYLNESLE---KRVR-PIA---------QE---------LNS 56 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCE---EEEEESSTTTH---HHHH-HHH---------HH---------TTC
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCE---EEEEeCCHHHH---HHHH-HHH---------hh---------CCc
Confidence 57999999999987 7999999999999965 57788874322 2222 221 11 134
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCcc--------cCHHHHHH---HHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKFD--------ERYDVAFG---INTLGAIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~--------~~~~~~~~---~Nv~gt~~ll~~a 148 (570)
..++..|++++ .+ .+.++ ..+|+++|+|+..... +.+..... ++..+...+....
T Consensus 57 ~~~~~~d~~~~------~~-~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (274)
T d2pd4a1 57 PYVYELDVSKE------EH-FKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTL 129 (274)
T ss_dssp CCEEECCTTCH------HH-HHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eeEeeecccch------hh-HHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccc
Confidence 56788898852 22 22333 4699999999975321 22232222 2333344444444
Q ss_pred HHccCceEEEEEecc-cccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCC
Q 008315 149 KKCVKLKVFVHVSTA-YVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGW 227 (570)
Q Consensus 149 ~~~~~lk~fV~vSTa-~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 227 (570)
.+..+-...|.+++. ...... ..
T Consensus 130 ~~~~~~~~~i~~~s~~~~~~~~--------------------------------------------------------~~ 153 (274)
T d2pd4a1 130 KPLLNNGASVLTLSYLGSTKYM--------------------------------------------------------AH 153 (274)
T ss_dssp GGGEEEEEEEEEEECGGGTSBC--------------------------------------------------------TT
T ss_pred ccccccCcceeeeccccccccc--------------------------------------------------------cc
Confidence 333233344444433 322211 23
Q ss_pred CchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeec
Q 008315 228 PNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDV 302 (570)
Q Consensus 228 ~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~ 302 (570)
...|+.+|+..+.+++.. ..++++..|.|+.+......... + ..........- ....-+
T Consensus 154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~---~----~~~~~~~~~~~---------~p~~r~ 217 (274)
T d2pd4a1 154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA---D----FRMILKWNEIN---------APLRKN 217 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST---T----HHHHHHHHHHH---------STTSSC
T ss_pred chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC---c----hHHHHHHHhhh---------hhccCC
Confidence 567999999999987653 56799999999988765432111 1 11111111110 011234
Q ss_pred chHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 303 IPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 303 VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
...+|+|++++.++.+.. .--+|+++.+.+|
T Consensus 218 ~~pedIA~~v~fL~S~~s-~~itG~~i~vDGG 248 (274)
T d2pd4a1 218 VSLEEVGNAGMYLLSSLS-SGVSGEVHFVDAG 248 (274)
T ss_dssp CCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhChhh-CCCcCceEEECCC
Confidence 678999999998886432 2235889998887
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=5.7e-10 Score=109.15 Aligned_cols=125 Identities=19% Similarity=0.171 Sum_probs=87.5
Q ss_pred CCCEE-EEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 11 ENKII-LVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 11 ~~k~V-lITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
+||+| +||||++.||.+++++|++. | .+|++..|+.... +...++ |+++ ..++.
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g---~~Vi~~~r~~~~~---~~~~~~---------l~~~---------~~~~~ 56 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFS---GDVVLTARDVTRG---QAAVQQ---------LQAE---------GLSPR 56 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSS---SEEEEEESSHHHH---HHHHHH---------HHHT---------TCCCE
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCC---CEEEEEECCHHHH---HHHHHH---------HHhc---------CCcEE
Confidence 47777 89999999999999999987 6 4567888865321 111111 2222 24678
Q ss_pred EEEccCCCCCCCCChhhhHHHHh-------CCccEEEEcCccCCc-------ccCHHHHHHHHHHHHHHHHHHHHH-ccC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELW-------NELDVMVNSAAITKF-------DERYDVAFGINTLGAIHLVNFAKK-CVK 153 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~-------~~vdiVih~Aa~v~f-------~~~~~~~~~~Nv~gt~~ll~~a~~-~~~ 153 (570)
++.+|+++ .+..+.++ ..+|++||+||.... .+.++..+++|+.|+..+.+.+.. |+.
T Consensus 57 ~~~~Dvs~-------~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~ 129 (275)
T d1wmaa1 57 FHQLDIDD-------LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP 129 (275)
T ss_dssp EEECCTTC-------HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred EEEEecCC-------HHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999995 33233332 369999999997532 134667799999999999998865 333
Q ss_pred ceEEEEEeccccc
Q 008315 154 LKVFVHVSTAYVA 166 (570)
Q Consensus 154 lk~fV~vSTa~v~ 166 (570)
-.++|.+||....
T Consensus 130 ~g~ivnisS~~~~ 142 (275)
T d1wmaa1 130 QGRVVNVSSIMSV 142 (275)
T ss_dssp EEEEEEECCHHHH
T ss_pred cCCccccccccee
Confidence 3579999997553
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.06 E-value=6.4e-10 Score=108.07 Aligned_cols=232 Identities=14% Similarity=0.043 Sum_probs=133.7
Q ss_pred hcCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 9 FLENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 9 ~~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
.++||++|||||+| .||.+++++|.+.|. +|++..|++.. ..+++. ++. ..+
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga---~Vil~~~~~~~--~~~~~~-------------~~~--------~~~ 56 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA---QLVLTGFDRLR--LIQRIT-------------DRL--------PAK 56 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC---EEEEEECSCHH--HHHHHH-------------TTS--------SSC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC---EEEEEeCChHH--HHHHHH-------------HHc--------CCc
Confidence 57899999999765 599999999999995 45677775421 112222 111 356
Q ss_pred eEEEEccCCCCCCCCChhhhHHHH---h---CCccEEEEcCccCCc---------c---cCHHHHHHHHHHHHHHHHHHH
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEEL---W---NELDVMVNSAAITKF---------D---ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l---~---~~vdiVih~Aa~v~f---------~---~~~~~~~~~Nv~gt~~ll~~a 148 (570)
...+.+|+++++- .++..+.+ + ..+|+++|+|+.... + +.+...+.+|+.+.....+.+
T Consensus 57 ~~~~~~dv~~~~~---~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (268)
T d2h7ma1 57 APLLELDVQNEEH---LASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKAL 133 (268)
T ss_dssp CCEEECCTTCHHH---HHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eeeEeeecccccc---cccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHH
Confidence 7788999995310 01111111 2 347999999996421 1 123345677777777777666
Q ss_pred HHccCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCC
Q 008315 149 KKCVKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWP 228 (570)
Q Consensus 149 ~~~~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 228 (570)
....+-...+.++|....... +..
T Consensus 134 ~~~~~~~~~i~~~s~~~~~~~--------------------------------------------------------p~~ 157 (268)
T d2h7ma1 134 LPIMNPGGSIVGMDFDPSRAM--------------------------------------------------------PAY 157 (268)
T ss_dssp GGGEEEEEEEEEEECCCSSCC--------------------------------------------------------TTT
T ss_pred hhhcccccccccccccccccC--------------------------------------------------------ccc
Confidence 554333344444443322211 234
Q ss_pred chHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCcccccc---chHHHHHHHhcCCCceeecCCCcee
Q 008315 229 NTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLK---TINALFVASAQGNLPCLVGETKTIM 300 (570)
Q Consensus 229 n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~---~~~~~i~~~~~G~~~~~~~~~~~~~ 300 (570)
..|+.+|+..+.+.+.. ..++.+..|.|+.|-.+..+.+.+...... ....+...+..... ...
T Consensus 158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------l~r 229 (268)
T d2h7ma1 158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP--------IGW 229 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT--------TCC
T ss_pred chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCC--------CCC
Confidence 68999999999988764 557999999999986643221111111100 00111111111000 001
Q ss_pred ecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 301 DVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 301 d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
-+...+|+|+++..++.+.. .--.|+++.+.+|
T Consensus 230 r~~~p~dva~~v~fL~Sd~a-~~iTG~~i~vDGG 262 (268)
T d2h7ma1 230 NMKDATPVAKTVCALLSDWL-PATTGDIIYADGG 262 (268)
T ss_dssp CTTCCHHHHHHHHHHHSSSC-TTCCSEEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchh-cCccCCEEEECcC
Confidence 23457899999998885322 2234788888776
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.04 E-value=4.3e-09 Score=100.26 Aligned_cols=210 Identities=12% Similarity=0.088 Sum_probs=130.7
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
+|++||||||+.||++++++|++.|.+ |++..|++.. .+...+.
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~---V~i~~~~~~~---------------------------------~~~~~~~ 44 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYR---VVVLDLRREG---------------------------------EDLIYVE 44 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEESSCCS---------------------------------SSSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECCccc---------------------------------ccceEee
Confidence 689999999999999999999999964 5677776532 3456778
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-----------ccCHHHHHHHHHHHHHHHHHHHHHc---------
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-----------DERYDVAFGINTLGAIHLVNFAKKC--------- 151 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-----------~~~~~~~~~~Nv~gt~~ll~~a~~~--------- 151 (570)
+|++....-....+. .......+.+++.++.... .+.++..+++|+.+...+++.+...
T Consensus 45 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 123 (241)
T d1uaya_ 45 GDVTREEDVRRAVAR-AQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123 (241)
T ss_dssp CCTTCHHHHHHHHHH-HHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTT
T ss_pred ccccchhhhHHHHHh-hhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcc
Confidence 888852110000000 0111234555555543211 1345677899999988888766442
Q ss_pred cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchH
Q 008315 152 VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTY 231 (570)
Q Consensus 152 ~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y 231 (570)
.+-.++|++||....... .....|
T Consensus 124 ~~~G~Ii~isS~~~~~~~--------------------------------------------------------~~~~~Y 147 (241)
T d1uaya_ 124 GQRGVIVNTASVAAFEGQ--------------------------------------------------------IGQAAY 147 (241)
T ss_dssp SCSEEEEEECCTHHHHCC--------------------------------------------------------TTCHHH
T ss_pred cCceeeeeecchhhccCC--------------------------------------------------------CCchhh
Confidence 123579999998764321 124579
Q ss_pred HHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHH
Q 008315 232 VFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVD 306 (570)
Q Consensus 232 ~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVD 306 (570)
+.||+..+.+.+.. ..|+.+..|-|+.|-.+.... +.+ ........... +.+ -+.-.+
T Consensus 148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~------~~~~~~~~~~~--~~~------R~g~pe 210 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG---LPE------KAKASLAAQVP--FPP------RLGRPE 210 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT---SCH------HHHHHHHTTCC--SSC------SCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch---hhh------hHHHHHHhcCC--CCC------CCcCHH
Confidence 99999999988764 568999999999986542211 000 11111111110 101 134578
Q ss_pred HHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 307 MVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 307 dva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
|+|++++.++.. .--.|++..+.+|
T Consensus 211 dvA~~v~fL~s~---~~iTG~~i~VDGG 235 (241)
T d1uaya_ 211 EYAALVLHILEN---PMLNGEVVRLDGA 235 (241)
T ss_dssp HHHHHHHHHHHC---TTCCSCEEEESTT
T ss_pred HHHHHHHHHHhC---CCCCCCEEEECCc
Confidence 999999888752 2234788888776
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.92 E-value=2.7e-08 Score=97.78 Aligned_cols=243 Identities=12% Similarity=0.070 Sum_probs=135.3
Q ss_pred cCCCEEEEECCcc--HhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 10 LENKIILVSGVTG--FVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 10 ~~~k~VlITGaTG--FlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
++||++|||||+| .||+++++.|++.|.+ |++..|++.......... ... .+ ...........-..++
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~---Vvi~~~~~~~~~~~~~~~----~~~-~~--~~~~~~~~~~~~~~~~ 75 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAE---ILVGTWVPALNIFETSLR----RGK-FD--QSRVLPDGSLMEIKKV 75 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEEEHHHHHHHHHHHH----TTT-TT--GGGBCTTSSBCCEEEE
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCE---EEEEeCchhhhhhHHHHH----Hhh-hh--hhhhhhhhhhhhhhhh
Confidence 6999999999987 7999999999999964 467777543221111111 000 00 0000000000001234
Q ss_pred EEEEccCCCCCCCC---------------ChhhhHHHH---hCCccEEEEcCccCC-----cc----cCHHHHHHHHHHH
Q 008315 88 TFVAGDISSEDLGL---------------KDSNLKEEL---WNELDVMVNSAAITK-----FD----ERYDVAFGINTLG 140 (570)
Q Consensus 88 ~~v~gDl~~~~lgl---------------s~~~~~~~l---~~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~g 140 (570)
..+..++..+..-. +..+..+.+ +..+|++||+||... +. +.+...+++|+.+
T Consensus 76 ~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~ 155 (297)
T d1d7oa_ 76 YPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYS 155 (297)
T ss_dssp EEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHH
T ss_pred hhhhhhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhh
Confidence 44444443221100 011122222 347999999998632 22 3367789999999
Q ss_pred HHHHHHHHHHccC-ceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccc
Q 008315 141 AIHLVNFAKKCVK-LKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGT 219 (570)
Q Consensus 141 t~~ll~~a~~~~~-lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (570)
+..+++.+..... -...+.+|+........
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------------------------------------- 186 (297)
T d1d7oa_ 156 FVSLLSHFLPIMNPGGASISLTYIASERIIP------------------------------------------------- 186 (297)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-------------------------------------------------
T ss_pred hhhhhhHHHHHhhcCCcceeeeehhhccccc-------------------------------------------------
Confidence 9999988765421 12345555443322110
Q ss_pred cccccCCCCchHHHHHHHHHHHHHHh------cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceee
Q 008315 220 ERAKIHGWPNTYVFTKTMGEMIMQQS------KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLV 293 (570)
Q Consensus 220 ~~~~~~~~~n~Y~~sK~~aE~~v~~~------~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~ 293 (570)
.....|..+|+..+.+++.. ..++.+..|.|+.|..+..... .....+........ |
T Consensus 187 ------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-------~~~~~~~~~~~~~~----P 249 (297)
T d1d7oa_ 187 ------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-------GFIDTMIEYSYNNA----P 249 (297)
T ss_dssp ------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-------SHHHHHHHHHHHHS----S
T ss_pred ------ccccceecccccccccccccchhccccceEEecccccccccchhhhhc-------cCCHHHHHHHHhCC----C
Confidence 23457999998888877542 3589999999999976543211 11122222222111 1
Q ss_pred cCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 294 GETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 294 ~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
..-+...+|+|++++.++.+... --.|++..+.+|
T Consensus 250 -----lgR~~~peevA~~v~fL~S~~a~-~itGq~i~vDGG 284 (297)
T d1d7oa_ 250 -----IQKTLTADEVGNAAAFLVSPLAS-AITGATIYVDNG 284 (297)
T ss_dssp -----SCCCBCHHHHHHHHHHHTSGGGT-TCCSCEEEESTT
T ss_pred -----CCCCCCHHHHHHHHHHHhCchhc-CCcCceEEECcC
Confidence 11235678999999888754332 224788888776
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.88 E-value=3.5e-07 Score=88.87 Aligned_cols=223 Identities=14% Similarity=0.080 Sum_probs=132.8
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
.++||||++.||++++++|++.|.. |++..|+... ..+.+.+++ .++. ......+.+|
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~---V~i~~~~~~~--~~~~~~~~l---------~~~~--------~~~~~~~~~d 61 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYA---VCLHYHRSAA--EANALSATL---------NARR--------PNSAITVQAD 61 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCE---EEEEESSCHH--HHHHHHHHH---------HHHS--------TTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCE---EEEEeCCCHH--HHHHHHHHH---------Hhhc--------CCceEEEEee
Confidence 5799999999999999999999964 4555554322 122222222 2222 2345556666
Q ss_pred CCCCC----------CCCChhhhHHHHh-------CCccEEEEcCccCCcc-------c--------------CHHHHHH
Q 008315 94 ISSED----------LGLKDSNLKEELW-------NELDVMVNSAAITKFD-------E--------------RYDVAFG 135 (570)
Q Consensus 94 l~~~~----------lgls~~~~~~~l~-------~~vdiVih~Aa~v~f~-------~--------------~~~~~~~ 135 (570)
...+. ..+++++..++++ ..+|++||+||..... + .+...+.
T Consensus 62 ~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (284)
T d1e7wa_ 62 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFG 141 (284)
T ss_dssp CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHh
Confidence 44321 1233444444443 4699999999975321 0 1223578
Q ss_pred HHHHHHHHHHHHHHHc---------cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCC
Q 008315 136 INTLGAIHLVNFAKKC---------VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAP 206 (570)
Q Consensus 136 ~Nv~gt~~ll~~a~~~---------~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~ 206 (570)
+|+.++..+.+.+.+. .+-.++|.+|+.......
T Consensus 142 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~------------------------------------- 184 (284)
T d1e7wa_ 142 SNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------------------------------------- 184 (284)
T ss_dssp HHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC-------------------------------------
T ss_pred hheeeeeeeeccccchhhhhHHHhcCCCCcccccccccccCCc-------------------------------------
Confidence 8999998888876542 122356666666543221
Q ss_pred hHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHH
Q 008315 207 QKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALF 281 (570)
Q Consensus 207 ~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i 281 (570)
.....|+.||+..+.+.+.. ..++.+..|-|+.+-.... ......
T Consensus 185 -------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~-----------~~~~~~ 234 (284)
T d1e7wa_ 185 -------------------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD-----------MPPAVW 234 (284)
T ss_dssp -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG-----------SCHHHH
T ss_pred -------------------cceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc-----------CCHHHH
Confidence 12357999999999988764 5589999999986422111 111222
Q ss_pred HHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 282 VASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 282 ~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
........ + ..-+...+|+|++++.++..... --.|+++.+.+|
T Consensus 235 ~~~~~~~p--l------~~R~~~peeiA~~v~fL~S~~s~-~itG~~i~VDGG 278 (284)
T d1e7wa_ 235 EGHRSKVP--L------YQRDSSAAEVSDVVIFLCSSKAK-YITGTCVKVDGG 278 (284)
T ss_dssp HHHHTTCT--T------TTSCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred HHHHhcCC--C------CCCCCCHHHHHHHHHHHhCchhc-CccCCeEEECcC
Confidence 23222211 0 01235678999999988864322 234788888877
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.86 E-value=4e-08 Score=98.26 Aligned_cols=185 Identities=11% Similarity=0.084 Sum_probs=108.0
Q ss_pred CCCEEEEEC--CccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 11 ENKIILVSG--VTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 11 ~~k~VlITG--aTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
++|..|||| ++..||.++++.|.++|.+ |++..|+........... ... + ..+.-... ........
T Consensus 1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~---V~i~~~~~~~~~~~~~~~----~~~-~---~~~~~~~~-~~~~~~~~ 68 (329)
T d1uh5a_ 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVK---IIFGIWPPVYNIFMKNYK----NGK-F---DNDMIIDK-DKKMNILD 68 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCE---EEEEECGGGHHHHHHHHH----TTT-T---TGGGEETT-TEECCEEE
T ss_pred CCcEEEEeCCCCCChHHHHHHHHHHHcCCE---EEEEeCchhhhhhhHHHH----HHh-h---hhHHHHHH-Hhhhhhhh
Confidence 478999999 5568999999999999964 456566543322111111 000 0 00000000 00011122
Q ss_pred EEEccCCCCCC-------------CCCh----hhhHH---HHhCCccEEEEcCccCC-----cc----cCHHHHHHHHHH
Q 008315 89 FVAGDISSEDL-------------GLKD----SNLKE---ELWNELDVMVNSAAITK-----FD----ERYDVAFGINTL 139 (570)
Q Consensus 89 ~v~gDl~~~~l-------------gls~----~~~~~---~l~~~vdiVih~Aa~v~-----f~----~~~~~~~~~Nv~ 139 (570)
....|+..... .+.+ +...+ +.+.++|++||+||... +. +.++..+++|+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~ 148 (329)
T d1uh5a_ 69 MLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp EEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccceehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchh
Confidence 33333331100 0001 11111 22357999999998642 22 347778999999
Q ss_pred HHHHHHHHHHHc-cCceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcc
Q 008315 140 GAIHLVNFAKKC-VKLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLG 218 (570)
Q Consensus 140 gt~~ll~~a~~~-~~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 218 (570)
|+..+++.+... ++-.++|.+||........
T Consensus 149 ~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p------------------------------------------------ 180 (329)
T d1uh5a_ 149 SLISLCKYFVNIMKPQSSIISLTYHASQKVVP------------------------------------------------ 180 (329)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT------------------------------------------------
T ss_pred HHHHHHHHHHhhcccccccccceeehhccccc------------------------------------------------
Confidence 999998887663 3446788888765432210
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHh----c--CCCcEEEEeccccccC
Q 008315 219 TERAKIHGWPNTYVFTKTMGEMIMQQS----K--ENLSLVIIRPTIVSGT 262 (570)
Q Consensus 219 ~~~~~~~~~~n~Y~~sK~~aE~~v~~~----~--~~lp~~IvRPsiV~g~ 262 (570)
++...|+.||+..|.+++.. . .++.+..|.||.|-.+
T Consensus 181 -------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~ 223 (329)
T d1uh5a_ 181 -------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp -------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCT
T ss_pred -------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccch
Confidence 23457999999999888754 2 3899999999988653
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.80 E-value=6.6e-07 Score=85.92 Aligned_cols=220 Identities=13% Similarity=0.131 Sum_probs=128.0
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+.+|||||+.||++++++|++.|. +|++..|+.... .+++.+++ .+.. ..+...+..|
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~---~Vvi~~r~~~~~--~~~~~~~~---------~~~~--------~~~~~~~~~~ 60 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF---RVVVHYRHSEGA--AQRLVAEL---------NAAR--------AGSAVLCKGD 60 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC---EEEEEESSCHHH--HHHHHHHH---------HHHS--------TTCEEEEECC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC---EEEEEECCchHH--HHHHHHHH---------Hhhc--------CCceEEEecc
Confidence 689999999999999999999996 457777764322 22222222 1111 2456667666
Q ss_pred CCCCCCCCChhhhHHHH-------hCCccEEEEcCccCCcc------------------cCHHHHHHHHHHHHHHHHHHH
Q 008315 94 ISSEDLGLKDSNLKEEL-------WNELDVMVNSAAITKFD------------------ERYDVAFGINTLGAIHLVNFA 148 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l-------~~~vdiVih~Aa~v~f~------------------~~~~~~~~~Nv~gt~~ll~~a 148 (570)
+.... +.++..+.+ +..+|++||+||..... .........|..+.......+
T Consensus 61 ~~~~~---~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (266)
T d1mxha_ 61 LSLSS---SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAF 137 (266)
T ss_dssp CSSST---THHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cccch---hHHHHHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhh
Confidence 65321 122222222 24699999999975321 112334556666666665555
Q ss_pred HHcc--------CceEEEEEecccccCCCCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhcccc
Q 008315 149 KKCV--------KLKVFVHVSTAYVAGERTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTE 220 (570)
Q Consensus 149 ~~~~--------~lk~fV~vSTa~v~~~~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 220 (570)
.... ....++.+|+.......
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 166 (266)
T d1mxha_ 138 ARRQGEGGAWRSRNLSVVNLCDAMTDLPL--------------------------------------------------- 166 (266)
T ss_dssp HHTC-------CCCEEEEEECCGGGGSCC---------------------------------------------------
T ss_pred ccccccccccccccccchhhhhccccccC---------------------------------------------------
Confidence 4421 11234444443332111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHHh-----cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecC
Q 008315 221 RAKIHGWPNTYVFTKTMGEMIMQQS-----KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGE 295 (570)
Q Consensus 221 ~~~~~~~~n~Y~~sK~~aE~~v~~~-----~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~ 295 (570)
.....|+.||+.-+.+.+.. ..++.+..|.|+.|..+...+ ......+..... .+
T Consensus 167 -----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-----------~~~~~~~~~~~p---l~- 226 (266)
T d1mxha_ 167 -----PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-----------QETQEEYRRKVP---LG- 226 (266)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-----------HHHHHHHHTTCT---TT-
T ss_pred -----cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-----------HHHHHHHHhcCC---CC-
Confidence 23568999999999987764 568999999999886542211 112222222110 00
Q ss_pred CCceeecchHHHHHHHHHHHHHHhcCCCCCCceEEeccC
Q 008315 296 TKTIMDVIPVDMVVNAMIVAMVAHAKQPSDANIYHVGSS 334 (570)
Q Consensus 296 ~~~~~d~VpVDdva~aii~a~~~~~~~~~~~~iyn~~s~ 334 (570)
.-+...+|||++++.++.+... --+|+++++.+|
T Consensus 227 ----r~~~~peeva~~v~fL~s~~s~-~itG~~i~vDGG 260 (266)
T d1mxha_ 227 ----QSEASAAQIADAIAFLVSKDAG-YITGTTLKVDGG 260 (266)
T ss_dssp ----SCCBCHHHHHHHHHHHHSGGGT-TCCSCEEEESTT
T ss_pred ----CCCCCHHHHHHHHHHHhCchhC-CccCCeEEECcc
Confidence 1124578999999988864332 224788988776
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.60 E-value=2.2e-06 Score=81.70 Aligned_cols=237 Identities=12% Similarity=0.080 Sum_probs=123.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|.|+||||+|.||++++++|++.|.+ |+++.|++... ..
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~---V~~~~~~~~~~--------------------------------------~~ 40 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQ---IVGIDIRDAEV--------------------------------------IA 40 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEEESSSSSE--------------------------------------EC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE---EEEEECChHHH--------------------------------------HH
Confidence 78999999999999999999999964 56777754321 12
Q ss_pred cCCCCCCCCC-hhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHc---cCceEEEEEecccccCC
Q 008315 93 DISSEDLGLK-DSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKC---VKLKVFVHVSTAYVAGE 168 (570)
Q Consensus 93 Dl~~~~lgls-~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~---~~lk~fV~vSTa~v~~~ 168 (570)
|+.+..-.-. ..+........+|+++|+|+.....+.+.....+|..+...+.+..... ........+++......
T Consensus 41 d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (257)
T d1fjha_ 41 DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120 (257)
T ss_dssp CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSS
T ss_pred HhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccch
Confidence 3331100000 0000001123589999999987777778888899999988877655432 13344555554433221
Q ss_pred CCCeeccccCCCCCCCChHHHHHHHHHHHHhhhhcCCChHHHHHHHhhccccccccCCCCchHHHHHHHHHHHHHHh---
Q 008315 169 RTGLILENPLDGASGLDFDAEMKVIDQKLNELKTKGAPQKEITLFMKNLGTERAKIHGWPNTYVFTKTMGEMIMQQS--- 245 (570)
Q Consensus 169 ~~g~i~E~~~~e~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~n~Y~~sK~~aE~~v~~~--- 245 (570)
.. .. . +.... .. .-..-.+.......+. ......|+.||+..+.+.+..
T Consensus 121 ~~----~~-~----~~~~~-----~~---------~g~~~~i~s~~~~~~~-----~~~~~~Y~asKaal~~ltr~lA~e 172 (257)
T d1fjha_ 121 AF----DK-N----PLALA-----LE---------AGEEAKARAIVEHAGE-----QGGNLAYAGSKNALTVAVRKRAAA 172 (257)
T ss_dssp CG----GG-C----TTHHH-----HH---------HTCHHHHHHHHHTCCT-----THHHHHHHHHHHHHHHHHHHTHHH
T ss_pred hh----hh-h----hhhhh-----cc---------CCcEEEEeeehhccCC-----CcchHHHHHHhhhhhccccccccc
Confidence 10 00 0 00000 00 0000000000000000 001235999999999998765
Q ss_pred --cCCCcEEEEeccccccCCCCCCCCccccccchHHHHHHHhcCCCceeecCCCceeecchHHHHHHHHHHHHHHhcCCC
Q 008315 246 --KENLSLVIIRPTIVSGTYKEPFPGWVEDLKTINALFVASAQGNLPCLVGETKTIMDVIPVDMVVNAMIVAMVAHAKQP 323 (570)
Q Consensus 246 --~~~lp~~IvRPsiV~g~~~~p~~gw~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~d~VpVDdva~aii~a~~~~~~~~ 323 (570)
..|+.+..|.|+.|-.+..+. .+.+. .......+.. ....-+...+|+|+++..++.+... -
T Consensus 173 l~~~gIrVN~I~PG~i~T~~~~~--~~~~~-----~~~~~~~~~~--------~PlgR~g~p~eva~~v~fL~S~~s~-~ 236 (257)
T d1fjha_ 173 WGEAGVRLNTIAPGATETPLLQA--GLQDP-----RYGESIAKFV--------PPMGRRAEPSEMASVIAFLMSPAAS-Y 236 (257)
T ss_dssp HHHTTCEEEEEEECC----------------------------CC--------CSTTSCCCTHHHHHHHHHHTSGGGT-T
T ss_pred cccccccccccccCCcCChhHHh--hcCCH-----HHHHHHHhcC--------CCCCCCcCHHHHHHHHHHHhCchhC-C
Confidence 568999999999986543211 01000 0001111100 0111234578999999988754332 2
Q ss_pred CCCceEEeccC
Q 008315 324 SDANIYHVGSS 334 (570)
Q Consensus 324 ~~~~iyn~~s~ 334 (570)
-.|++..+.+|
T Consensus 237 itG~~i~vDGG 247 (257)
T d1fjha_ 237 VHGAQIVIDGG 247 (257)
T ss_dssp CCSCEEEESTT
T ss_pred ccCceEEeCCC
Confidence 34788888776
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.50 E-value=6.8e-08 Score=88.73 Aligned_cols=84 Identities=17% Similarity=0.133 Sum_probs=60.9
Q ss_pred hcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceE
Q 008315 9 FLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKIT 88 (570)
Q Consensus 9 ~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~ 88 (570)
-++||+|+||||+|.||+.+++.|++.|. +|++..|+.... +.+. +.+.++ .++.
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~---~V~~~~r~~~~~---~~~~---------~~~~~~----------~~~~ 74 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA---EVVLCGRKLDKA---QAAA---------DSVNKR----------FKVN 74 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSHHHH---HHHH---------HHHHHH----------HTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhcc---chhhcccchHHH---HHHH---------HHHHhc----------cchh
Confidence 36899999999999999999999999995 457888874321 1111 111111 2355
Q ss_pred EEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccC
Q 008315 89 FVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAIT 124 (570)
Q Consensus 89 ~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v 124 (570)
...+|++ +.+..++.++++|+|||+||..
T Consensus 75 ~~~~d~~-------~~~~~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 75 VTAAETA-------DDASRAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp CEEEECC-------SHHHHHHHTTTCSEEEECCCTT
T ss_pred hhhhhcc-------cHHHHHHHhcCcCeeeecCccc
Confidence 6788988 4445568889999999999863
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.33 E-value=0.00052 Score=58.95 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=72.5
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|.|+||+|.+|+.++-.|..+ .-+..+.++...+. ..+.+ ++..... ..... +-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~-~~~~elvLiDi~~~---~~~a~--Dl~~~~~----------------~~~~~---~~ 56 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNS-PLVSRLTLYDIAHT---PGVAA--DLSHIET----------------RATVK---GY 56 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC-TTCSEEEEEESSSH---HHHHH--HHTTSSS----------------SCEEE---EE
T ss_pred eEEEECCCChHHHHHHHHHHhC-CccceEEEEecccc---chhhH--HHhhhhh----------------hcCCC---eE
Confidence 7999999999999998877664 45677877765431 11111 1211100 01111 11
Q ss_pred CCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 94 ISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
+. ..+. .+.++++|+|+-+||..+- .+...+.++.|+...+.+++.+++. +.+.++.+-
T Consensus 57 ~~-------~~~~-~~~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~-~p~~iiivv 116 (144)
T d1mlda1 57 LG-------PEQL-PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII 116 (144)
T ss_dssp ES-------GGGH-HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred Ec-------CCCh-HHHhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCeEEEEe
Confidence 22 2232 3666899999999996433 2444566899999999999999887 556665554
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.17 E-value=0.0035 Score=53.62 Aligned_cols=118 Identities=11% Similarity=0.038 Sum_probs=72.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|..++..|+.++ -+..+.++.+.+.-.. .+-+..++..... ....++....+
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~-~~g~a~Dl~~~~~--------------~~~~~~~~~~~ 64 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEP-FMKDLVLIGREHSINK-LEGLREDIYDALA--------------GTRSDANIYVE 64 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCT-TCCEEEEEECGGGHHH-HHHHHHHHHHHHT--------------TSCCCCEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-cccccccccchhhhHh-hhcccccchhccc--------------ccccCCccccC
Confidence 579999999999999998887764 3467777777543211 1111112221110 01122333211
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
- + .+. ..++++|+|+-+||..+- .+.-.+.++.|..-.+.+.+...+. +.+.++
T Consensus 65 ~-~--------~d~--~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~-~~~~ii 119 (145)
T d1hyea1 65 S-D--------ENL--RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-CDTKIF 119 (145)
T ss_dssp E-T--------TCG--GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred C-c--------chH--HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhcc-CCCeEE
Confidence 1 0 111 344799999999997543 4456677899999999999988776 334443
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.0037 Score=53.47 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=67.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|+||+|.+|++++-.|..+.+.+..+.++...+ .... +-+ ++.... .......+.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g-~a~--Dl~h~~----------------~~~~~~~~~~ 60 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPG-VAV--DLSHIP----------------TAVKIKGFSG 60 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHH-HHH--HHHTSC----------------SSCEEEEECS
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchh-HHH--HHHCCc----------------cccCCcEEEc
Confidence 5899999999999999987766545556776766533 2211 111 221110 0122222322
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
..++ ..+++.|+||-+||..+ -.+...+.+..|..-.+.+.+...+.
T Consensus 61 ----------~~~~--~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~ 108 (145)
T d2cmda1 61 ----------EDAT--PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKT 108 (145)
T ss_dssp ----------SCCH--HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCc--cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhh
Confidence 1122 45689999999999753 23445566899999999999988876
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=96.94 E-value=0.0045 Score=52.98 Aligned_cols=117 Identities=12% Similarity=0.118 Sum_probs=70.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|.|.|+ |.+|..++..|+.++- +..|+++.+.+.....+. . ++.....+ .......
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~-~~elvL~D~~~~~~~g~a--~-Dl~~a~~~---------------~~~~~~~ 63 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGI-AEEFVIVDVVKDRTKGDA--L-DLEDAQAF---------------TAPKKIY 63 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHHHH--H-HHHGGGGG---------------SCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEeecccchhHHHH--H-HHhccccc---------------cCCceEe
Confidence 4679999995 9999999999998763 467788876542211111 1 22111111 1223445
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEEec
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVST 162 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vST 162 (570)
.+|.. + +.++|+|+.+|+..+- .+...+.+..|+.-.+.+.+...+. +.+.++.+-|
T Consensus 64 ~~d~~---------~-----~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~-~p~aivivvt 121 (146)
T d1ez4a1 64 SGEYS---------D-----CKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (146)
T ss_dssp ECCGG---------G-----GTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred eccHH---------H-----hccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEeC
Confidence 55532 2 3789999999987543 2344556889999999999988886 5566555533
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.94 E-value=0.0049 Score=54.41 Aligned_cols=112 Identities=14% Similarity=0.037 Sum_probs=69.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhC----CCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQ----PNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g----~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
-+..+|.||||+|.||..++-.|.+.. .....++++..++..... +-+.-++..+. ..
T Consensus 22 k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l-~g~~mdl~d~a-----------------~~ 83 (175)
T d7mdha1 22 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQAL-EGVAMELEDSL-----------------YP 83 (175)
T ss_dssp CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHH-HHHHHHHHTTT-----------------CT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchh-cchhhhhcccc-----------------cc
Confidence 345689999999999999999887631 112244555444332211 11110111111 11
Q ss_pred ceE-EEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 86 KIT-FVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 86 kv~-~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
... .+.++ .+ .+.++++|+||-+||..+ ..+...+.+..|..-.+.+.+...+.
T Consensus 84 ~~~~~~~~~----------~~--~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 84 LLREVSIGI----------DP--YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp TEEEEEEES----------CH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccccc----------cc--hhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 222 22221 11 256689999999998764 44667788999999999999999885
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.92 E-value=0.013 Score=50.43 Aligned_cols=111 Identities=9% Similarity=-0.015 Sum_probs=66.3
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCcc----EEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVK----KLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~----~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.++|.|+||+|++|++++-.|..... +. -..-++-........+....++... .....
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~ 65 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEM-LGKDQPVILQLLEIPQAMKALEGVVMELEDC-----------------AFPLL 65 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTT-TCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-----------------TCTTE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccc-cccccchhHhHhccccchhhHcCchhhhhcc-----------------ccccc
Confidence 46999999999999999998886432 11 1112222222221111111111110 11233
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
..+...- .+ ...++++|+|+-+||..+- .+...+.+..|+.-.+.+.+...+.
T Consensus 66 ~~~~~~~---------~~--~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 66 AGLEATD---------DP--KVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp EEEEEES---------CH--HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCC---------ch--hhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333321 12 2566899999999997643 3556677899999999999988884
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.86 E-value=0.00092 Score=57.45 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=30.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecCC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAAD 50 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~~ 50 (570)
|+|.|.||||++|+.+++.|++. ...+..++++.+++.
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 58999999999999999999875 345667887776654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.85 E-value=0.013 Score=49.77 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=71.9
Q ss_pred EEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEcc
Q 008315 14 IILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAGD 93 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~gD 93 (570)
+|.|+||+|.+|+.++-.|+.++ -+..++++....+......... ++.... + +..+..+..+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~~~~~g~a~-Dl~~~~---------~------~~~~~~i~~~~ 64 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRD-IADEVVFVDIPDKEDDTVGQAA-DTNHGI---------A------YDSNTRVRQGG 64 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CCSEEEEECCGGGHHHHHHHHH-HHHHHH---------T------TTCCCEEEECC
T ss_pred eEEEECCCCcHHHHHHHHHHhCC-CCCEEEEEecCCcccccceeec-chhhcc---------c------ccCCceEeeCC
Confidence 78999999999999999998875 3467777765432211111111 121111 1 12344444454
Q ss_pred CCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 94 ISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 94 l~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.. + +.++|+|+-+||..+- .+...+.++.|..-.+.+.+..++. +.+.++
T Consensus 65 ~~---------~-----~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~-~p~~i~ 115 (142)
T d1o6za1 65 YE---------D-----TAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYIS 115 (142)
T ss_dssp GG---------G-----GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEE
T ss_pred HH---------H-----hhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhc-CCCceE
Confidence 22 2 3689999999996543 3456677999999999999988887 444443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.49 E-value=0.011 Score=50.56 Aligned_cols=114 Identities=13% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
.+++|-|.|| |.+|+.++..|+.++. +..++++.+.+.....+ .. ++.... .+....+...
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l-~~el~L~Di~~~~~~g~--a~-Dl~~~~--------------~~~~~~~~~~ 65 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGI-ADEIVLIDANESKAIGD--AM-DFNHGK--------------VFAPKPVDIW 65 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHHH--HH-HHHHHT--------------TSSSSCCEEE
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEeeccccccch--hc-cHhhCc--------------cccCCCeEEE
Confidence 4689999996 9999999999998764 56777777654221111 11 221111 1112334444
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEE
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFV 158 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV 158 (570)
.+|. +.++++|+|+.+|+..+- .+...+.+..|+.-.+.+.+...+. +.+.++
T Consensus 66 ~~d~--------------~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~~ 119 (148)
T d1ldna1 66 HGDY--------------DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLF 119 (148)
T ss_dssp ECCG--------------GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEE
T ss_pred ECCH--------------HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhh-CCCceE
Confidence 4442 234789999999987542 3334456788999999998888776 334443
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.47 E-value=0.019 Score=49.33 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=71.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV 90 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v 90 (570)
+.++|-|.|| |.+|+.++..|...+ +..++++...+.....+.. ++.....+ ........
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~--~~el~L~D~~~~~~~g~a~---Dl~~~~~~--------------~~~~~~~~ 65 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRE--LADVVLYDVVKGMPEGKAL---DLSHVTSV--------------VDTNVSVR 65 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHH---HHHHHHHH--------------TTCCCCEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCC--CceEEEEEeccccchhHHH---HHhhhccc--------------cCCeeEEe
Confidence 4689999997 999999988777765 3567766655533222211 22111100 00111111
Q ss_pred EccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-c-----CHHHHHHHHHHHHHHHHHHHHHccCceEEEEEe
Q 008315 91 AGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-E-----RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHVS 161 (570)
Q Consensus 91 ~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~-----~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~vS 161 (570)
+. .+ .+..+++.|+|+-+|+..+-. + .-.+.+..|+.-.+.+++.+.+. +.+.++.+-
T Consensus 66 -~~----------~~-~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~-~p~aiviiv 129 (154)
T d1pzga1 66 -AE----------YS-YEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY-CPKTFIIVV 129 (154)
T ss_dssp -EE----------CS-HHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred -cc----------Cc-hhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEe
Confidence 11 11 235568999999999875432 1 33455788999999999988887 555655543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.44 E-value=0.0069 Score=50.56 Aligned_cols=71 Identities=14% Similarity=0.245 Sum_probs=48.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|+|.|+ |.+|+.|++.|.+.|.+| .++.+++. ..+++. ++ -.+.++.|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v---~vid~d~~---~~~~~~-------------~~----------~~~~vi~G 50 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDI---VLIDIDKD---ICKKAS-------------AE----------IDALVING 50 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEE---EEEESCHH---HHHHHH-------------HH----------CSSEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCc---ceecCChh---hhhhhh-------------hh----------hhhhhccC
Confidence 68999997 999999999999999664 45544321 111221 11 24678999
Q ss_pred cCCCCCCCCChhhhHHHH-hCCccEEEEc
Q 008315 93 DISSEDLGLKDSNLKEEL-WNELDVMVNS 120 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiVih~ 120 (570)
|.+ +.+.++.+ +++++.++-+
T Consensus 51 d~~-------~~~~l~~~~i~~a~~vv~~ 72 (132)
T d1lssa_ 51 DCT-------KIKTLEDAGIEDADMYIAV 72 (132)
T ss_dssp CTT-------SHHHHHHTTTTTCSEEEEC
T ss_pred ccc-------chhhhhhcChhhhhhhccc
Confidence 999 45555444 5688888864
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.32 E-value=0.053 Score=45.60 Aligned_cols=114 Identities=13% Similarity=0.023 Sum_probs=71.9
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE-
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA- 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~- 91 (570)
++|.|+|| |.+|..++..|+.++ -+..+.++.+.+........ ++.....+ ...+..+..
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~-l~~el~L~Di~~~~~~~~~~---d~~~~~~~--------------~~~~~~i~~~ 61 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQ-LARELVLLDVVEGIPQGKAL---DMYESGPV--------------GLFDTKVTGS 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSSSHHHHHHH---HHHTTHHH--------------HTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCC-CCceEEEeccccccchhhhh---hhhcccch--------------hcccceEEec
Confidence 57999996 999999998888765 35678888776654332211 12111111 012333332
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
+|. +.++++|+|+-+||..+ ..+.-.+.+..|..-.+.+.+...+. +.+.++.+
T Consensus 62 ~~~--------------~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~-~p~aiviv 116 (142)
T d1guza1 62 NDY--------------ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIV 116 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred CCH--------------HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhcc-CCCeEEEE
Confidence 221 23479999999999753 33455667899999999999888775 34444433
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.32 E-value=0.0099 Score=52.62 Aligned_cols=85 Identities=16% Similarity=0.236 Sum_probs=57.4
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++|+|+|.|+ |..|++++..|.+.| ++.|++..|++......+.+ ++++.... ....
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g--~~~i~i~nR~~~~~~~~~~l---------~~~~~~~~----------~~~~ 73 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEG--LKEIKLFNRRDEFFDKALAF---------AQRVNENT----------DCVV 73 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHH---------HHHHHHHS----------SCEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcC--CceEeeeccchHHHHHHHHH---------HHHHHhhc----------Ccce
Confidence 57899999995 888999999999976 57899999987654332222 22232221 2334
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCcc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~ 123 (570)
...|+.+ .+++ .....++|+|||+...
T Consensus 74 ~~~~~~~------~~~~-~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 74 TVTDLAD------QQAF-AEALASADILTNGTKV 100 (182)
T ss_dssp EEEETTC------HHHH-HHHHHTCSEEEECSST
T ss_pred Eeeeccc------ccch-hhhhcccceeccccCC
Confidence 4566663 2333 4666789999999764
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.28 E-value=0.031 Score=47.25 Aligned_cols=112 Identities=16% Similarity=0.090 Sum_probs=68.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++-.|+.++ -+..++++.+.+.....+.- ++.... . +..+.....+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~-l~~el~L~D~~~~~~~g~a~---Dl~~~~--------------~-~~~~~~~~~~ 61 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAIGEAM---DINHGL--------------P-FMGQMSLYAG 61 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CCHHHH---HHTTSC--------------C-CTTCEEEC--
T ss_pred CeEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEeccCCccceeee---eeccCc--------------c-cCCCeeEeeC
Confidence 47889997 999999999998875 45778888877654332211 221110 1 1233333333
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
|. ..++++|+|+-+|+..+ ..+...+.+..|+.-.+.+++...+. +.+.++.
T Consensus 62 ~~--------------~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~-~p~ai~i 114 (142)
T d1y6ja1 62 DY--------------SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVIL 114 (142)
T ss_dssp CG--------------GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEE
T ss_pred cH--------------HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhcc-CCCceEE
Confidence 21 23478999999998754 24556677899999999999988876 3444433
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.19 E-value=0.049 Score=45.75 Aligned_cols=113 Identities=16% Similarity=0.129 Sum_probs=71.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
++|.|.|| |.+|..++..|+.++- +..+.++.+.+.....+ . . ++.... + +..+.....+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l-~~el~L~Di~~~~~~g~-~-~-Dl~~~~---------~------~~~~~~~~~~ 60 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGF-AREMVLIDVDKKRAEGD-A-L-DLIHGT---------P------FTRRANIYAG 60 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHHH-H-H-HHHHHG---------G------GSCCCEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCC-CCEEEEEecccccccch-h-c-cccccc---------c------ccccccccCC
Confidence 57999996 9999999988888763 56787776654221111 1 1 121111 0 1233444444
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
|. +.++++|+|+-+|+..+- .+.-.+.+..|..-.+.+.+...+. +.+.++.+
T Consensus 61 ~~--------------~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~-~p~aiviv 114 (140)
T d1a5za1 61 DY--------------ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIV 114 (140)
T ss_dssp CG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred cH--------------HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhc-CCCcEEEE
Confidence 32 224789999999998654 3445667888999999998888876 44555544
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.17 E-value=0.042 Score=46.40 Aligned_cols=113 Identities=13% Similarity=0.067 Sum_probs=70.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
.+|.|+|+ |.+|+.++-.|+.++- +..+.++.+.+.....+ . . ++.....| ........+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l-~~ElvL~D~~~~~~~g~-a-~-Dl~~a~~~---------------~~~~~i~~~ 61 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGI-AREIVLEDIAKERVEAE-V-L-DMQHGSSF---------------YPTVSIDGS 61 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSSHHHHHHH-H-H-HHHHTGGG---------------STTCEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccccchhH-H-H-HHHhcccc---------------CCCceeecC
Confidence 47899996 9999999999988763 56777766554322111 1 1 22221111 122233322
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVH 159 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~ 159 (570)
+ ++ +.+++.|+|+-+||..+- .+...+.+..|..-.+.+.+..++. +.+.++.
T Consensus 62 ~-----------~~--~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~-~p~ai~i 115 (143)
T d1llda1 62 D-----------DP--EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYM 115 (143)
T ss_dssp S-----------CG--GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEE
T ss_pred C-----------CH--HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhh-CCCeEEE
Confidence 2 11 234789999999998653 3556677899999999998888776 4444443
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.16 E-value=0.0034 Score=53.75 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=28.6
Q ss_pred CEEEEECCccHhHHHHHHHHHHh-CCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRV-QPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~-g~~V~~i~~lvR~~ 49 (570)
++|.|.||||++|+.|++.|++. .+.+..++.+..++
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~ 38 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ 38 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccc
Confidence 57999999999999999999874 34556676665443
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.12 E-value=0.0019 Score=55.23 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=27.2
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
.++|.|.||||++|+.|++-|.+..+....+..+..
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s 37 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 37 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence 478999999999999999988765543445555543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.04 E-value=0.034 Score=47.60 Aligned_cols=112 Identities=17% Similarity=0.044 Sum_probs=64.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCC----CccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQP----NVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEK 86 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~----~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~k 86 (570)
+.++|.|+||+|.+|++++-.|+..+. .+..++++...+ .....+.+.-++.... ...
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~-~~~~~~~l~~~~~~~~-----------------~~~ 63 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP-MMGVLDGVLMELQDCA-----------------LPL 63 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG-GHHHHHHHHHHHHHTC-----------------CTT
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc-chhhhhhhhhhhcccc-----------------ccc
Confidence 356999999999999999998876421 222333333322 2221222111111110 112
Q ss_pred eEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHc
Q 008315 87 ITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKC 151 (570)
Q Consensus 87 v~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~ 151 (570)
...+.+ + ..+ ++.++++|+|+-+||..+- .+...+.++.|..-.+.+.+...+.
T Consensus 64 ~~~~~~--~-------~~~--~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 64 LKDVIA--T-------DKE--EIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp EEEEEE--E-------SCH--HHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred cccccc--C-------ccc--ccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 222222 1 111 2566899999999997543 3444556899999999998877663
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.83 E-value=0.032 Score=47.38 Aligned_cols=114 Identities=11% Similarity=0.080 Sum_probs=67.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|+|-|+|+ |.+|..++-.|+.++- +..++++.+.+.....+ . . ++..... +.........+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~-~~elvL~Di~~~~~~g~-~-~-Dl~~a~~--------------~~~~~~~~~~~ 62 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGV-ADDYVFIDANEAKVKAD-Q-I-DFQDAMA--------------NLEAHGNIVIN 62 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC-CSEEEEECSSHHHHHHH-H-H-HHHHHGG--------------GSSSCCEEEES
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCC-CceEEEEecccchhhhH-H-H-hhhcccc--------------ccCCccceecc
Confidence 78999995 9999999999998763 45676666543221111 1 0 1211110 11123344444
Q ss_pred cCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-c----CHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 93 DISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-E----RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~----~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
|.. .++++|+|+-+||..+.. + .-.+.++.|+.-.+.+.+..++. +.+.++.+
T Consensus 63 d~~--------------~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~-~p~aiviv 120 (146)
T d1hyha1 63 DWA--------------ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (146)
T ss_dssp CGG--------------GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred CHH--------------HhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhc-CCCeEEEE
Confidence 422 237899999999975421 1 11234678999999998888876 44444433
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.81 E-value=0.0051 Score=53.64 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=30.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
++|+|+|.|| |++|+.+++.|.+.|+ +|++..|+..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~---~V~v~dr~~~ 36 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGI---KVTVACRTLE 36 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTC---EEEEEESCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCC---EEEEEECChH
Confidence 4699999986 9999999999999986 4578888754
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.53 E-value=0.1 Score=43.83 Aligned_cols=114 Identities=14% Similarity=0.019 Sum_probs=69.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE-
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA- 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~- 91 (570)
|+|-|.|+ |.+|..++..|+.++ .+..+.++.+.++..... . . ++.... + +.........
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~-~~~elvL~Di~~~~~~g~-a-l-Dl~~~~---------~-----~~~~~~~i~~~ 61 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVGE-A-M-DLAHAA---------A-----GIDKYPKIVGG 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHHH-H-H-HHHHHH---------H-----TTTCCCEEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcC-cCceEEEEecccchhhHH-H-H-HHhhhc---------c-----ccCCCCccccC
Confidence 58999996 999999999888775 557787776543221111 0 0 111110 0 0112222222
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCc-ccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKF-DERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f-~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
+|. +.+++.|+|+-.|+..+- .....+.+..|..-.+.+.+..++. +.+.++.+
T Consensus 62 ~d~--------------~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~p~aiviv 116 (142)
T d1ojua1 62 ADY--------------SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILV 116 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEE
T ss_pred CCH--------------HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhh-CCCcEEEE
Confidence 221 344789999999986543 3455667888999999999988876 34444443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.43 E-value=0.015 Score=53.32 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=27.3
Q ss_pred cCCCEEEEECC----------------ccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGV----------------TGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGa----------------TGFlG~~Lve~Ll~~g~~V 39 (570)
++|++||||+| ||-+|.+|++.+.+.|.+|
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V 49 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANV 49 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCch
Confidence 58999999984 8999999999999999876
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.43 E-value=0.076 Score=45.61 Aligned_cols=116 Identities=17% Similarity=0.120 Sum_probs=72.5
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCce
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKI 87 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv 87 (570)
.....++|-|.|+ |.+|..++-.|+.++. +..+.++.+.++....+ .. ++.....| .....
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l-~~ElvLiD~~~~~a~g~--al-Dl~h~~~~--------------~~~~~ 76 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKSL-ADELALVDVLEDKLKGE--MM-DLQHGSLF--------------LQTPK 76 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHH--HH-HHHHTGGG--------------CCCSE
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcCC-CcEEEEEEeccchhHHH--HH-HHhccccc--------------cCCCe
Confidence 3456689999996 9999999999998763 46777776643222111 11 22221111 11222
Q ss_pred EEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 88 TFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 88 ~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
..-.+|. ..+++.|+|+.+||..+-. +...+.+..|+.-.+.++...++. +.+.+
T Consensus 77 ~~~~~d~--------------~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~-~p~ai 132 (160)
T d1i0za1 77 IVADKDY--------------SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKY-SPDCI 132 (160)
T ss_dssp EEECSSG--------------GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred EEeccch--------------hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhc-CCCcE
Confidence 2233332 2347899999999976433 444566888999999999888876 44443
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.22 E-value=0.13 Score=43.65 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=69.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEE
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVA 91 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~ 91 (570)
..+|-|.|+ |.+|+.++..|+.++ +..+.++.+.+.....+.. ++.....|. ..+.....
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~--l~el~L~Di~~~~~~g~a~---Dl~~~~~~~--------------~~~~~v~~ 62 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKN--LGDVVLFDIVKNMPHGKAL---DTSHTNVMA--------------YSNCKVSG 62 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHH---HHHTHHHHH--------------TCCCCEEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCC--CCeEEEEeccCCcceeeec---chhhhcccc--------------CCCcEEEe
Confidence 358999995 999999997666543 5778777775543222111 232222110 12223332
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-c-----CHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-E-----RYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~-----~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
.+- . +.+++.|+|+-+|+..+.. + .-...+..|+.-.+.+++..++. ..+.++.+
T Consensus 63 ~~~--------~-----~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~-~p~aiviv 123 (150)
T d1t2da1 63 SNT--------Y-----DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN-CPNAFIIV 123 (150)
T ss_dssp ECC--------G-----GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred ccc--------c-----cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence 221 1 2337899999999975432 1 13455889999999999988876 44555444
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.98 E-value=0.14 Score=42.89 Aligned_cols=113 Identities=12% Similarity=0.096 Sum_probs=65.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEE-E
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFV-A 91 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v-~ 91 (570)
++|-|.|+ |.+|..++-.|..++ +..+.++...+.....+. + ++.....+. .....+. .
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~--l~dl~l~D~~~~~~~~~~-~--Dl~~~~~~~--------------~~~~~i~~~ 61 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKE--LGDIVLLDIVEGVPQGKA-L--DLYEASPIE--------------GFDVRVTGT 61 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHT--CSEEEEECSSSSHHHHHH-H--HHHTTHHHH--------------TCCCCEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCC--cceEEEEeeccccchhHH-H--Hhhcccccc--------------CCCCEEEec
Confidence 68999996 999999998888764 356777666544322211 1 222221110 1122222 2
Q ss_pred ccCCCCCCCCChhhhHHHHhCCccEEEEcCccCC-cccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 92 GDISSEDLGLKDSNLKEELWNELDVMVNSAAITK-FDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 92 gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~-f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
+|. ..+++.|+|+-+||..+ ..+...+.+..|+.-.+.+++...+. +.+.++.+
T Consensus 62 ~d~--------------~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~-~p~aiviv 116 (142)
T d1uxja1 62 NNY--------------ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPL-SPNAVIIM 116 (142)
T ss_dssp SCG--------------GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGG-CTTCEEEE
T ss_pred CcH--------------HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhcc-CCCceEEE
Confidence 222 22378999999999754 23444556788999999998888775 44554444
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=94.95 E-value=0.021 Score=50.28 Aligned_cols=36 Identities=19% Similarity=0.071 Sum_probs=30.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+|.+|||+||+|-+|...+.-....|. +|++.+|++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga---~vi~~~~~~ 64 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGC---KVVGAAGSD 64 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCC---EEEEeCCCH
Confidence 589999999999999999988887774 568888764
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=94.93 E-value=0.025 Score=49.26 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=31.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.|++|||+||+|-+|...+.-+...|. +|++.++++..
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~---~vi~~~~~~~~ 64 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGL---RVLAAASRPEK 64 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTC---EEEEEESSGGG
T ss_pred CCCEEEEEeccccchhhhhhhhccccc---ccccccccccc
Confidence 688999999999999999988877774 56788876543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.78 E-value=0.0096 Score=52.25 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=29.3
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
|+|.|+||+|.+|++|++.|.+.|++| .+..|++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V---~l~~R~~ 34 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEI---VVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEE---EEEESSH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEE---EEEECCH
Confidence 579999999999999999999999765 5677754
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.64 E-value=0.024 Score=49.42 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=30.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|||+||+|-+|...+.-+...|. +++++++++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~---~vi~~~~~~ 63 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGL---KILGTAGTE 63 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEEeccccccccccccccccCc---ccccccccc
Confidence 688999999999999999988887774 467888753
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=94.62 E-value=0.017 Score=43.43 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=31.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
++.+|||+||+|-+|...+.-+...|.+ |++..+++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~---Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQ---VVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCe---EEEEECCHHHH
Confidence 5789999999999999999987777754 46778776543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.41 E-value=0.018 Score=50.59 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=31.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
+|.+|||+||+|-+|...+.-....|.. |++.++++++.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~---Viat~~s~~k~ 69 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYT---VEASTGKAAEH 69 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCTTCH
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCc---eEEecCchHHH
Confidence 3678999999999999999888787854 47788876654
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=94.38 E-value=0.038 Score=47.60 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=32.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+++++|||.|+ |-+|+.+++.|...|. +.+++..|+.
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~--~~i~v~nRt~ 58 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV--RAVLVANRTY 58 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCC--SEEEEECSSH
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCC--cEEEEEcCcH
Confidence 58999999996 9999999999999874 6788888874
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=94.20 E-value=0.028 Score=49.35 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=32.8
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA 54 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~ 54 (570)
.+|.|.||||++|..|++-|.+ -|++.-+++..|+..++..
T Consensus 2 ikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~~i 42 (176)
T d1vkna1 2 IRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGKKL 42 (176)
T ss_dssp EEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTSBH
T ss_pred eEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCCcc
Confidence 4899999999999999996664 6888777777776666544
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=93.84 E-value=0.019 Score=50.07 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=32.0
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCccc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTES 53 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~ 53 (570)
+.+|||+||+|-+|...++-....|. +|+..+|++.+..
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga---~Viat~~s~~k~~ 62 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGY---DVVASTGNREAAD 62 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTC---CEEEEESSSSTHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCC---ceEEEecCHHHHH
Confidence 56899999999999999988887885 4578898876543
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=93.81 E-value=0.034 Score=48.81 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=29.1
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
++|.|.|||||+|+.|++-|.. -|++.-.++..++.
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~-HP~~ei~~l~~~s~ 37 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNR-HPHMTITALTVSAQ 37 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTEEEEEEEEETT
T ss_pred cEEEEECcccHHHHHHHHHHHh-CCCCceEeeEeecc
Confidence 5899999999999999987765 57886666666654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.75 E-value=0.041 Score=48.10 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=30.1
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+|.+|||+||+|-+|...+.-+...|. ++++.++++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~---~vi~~~~~~ 60 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGA---RIYTTAGSD 60 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTC---EEEEEESSH
T ss_pred CCCEEEEECCCCCcccccchhhccccc---cceeeeccc
Confidence 478999999999999999998888884 456777754
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.59 E-value=0.091 Score=45.07 Aligned_cols=114 Identities=17% Similarity=0.061 Sum_probs=67.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
++..+|.|.|+ |.+|..++..|+.++. +..++++.+.+..... ... ++.....| .......
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l-~~elvL~D~~~~~a~g--~al-Dl~~~~~~--------------~~~~~~~ 77 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGL-ADELALVDADTDKLRG--EAL-DLQHGSLF--------------LSTPKIV 77 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTS-CSEEEEECSCHHHHHH--HHH-HHHHTTTT--------------CSCCEEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCC-CCEEEEEeCCchhhhc--cHH-HHhCcchh--------------cCCCeEE
Confidence 45568999995 9999999998888653 4677777654322111 111 22211111 1112222
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcc-cCHHHHHHHHHHHHHHHHHHHHHccCceEE
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFD-ERYDVAFGINTLGAIHLVNFAKKCVKLKVF 157 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~-~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~f 157 (570)
..+|. ..+.+.|+|+-+|+..+-. +.-.+.++.|+.-.+.+....++. +.+.+
T Consensus 78 ~~~d~--------------~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~-~p~~i 131 (159)
T d2ldxa1 78 FGKDY--------------NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQN-SPDCK 131 (159)
T ss_dssp EESSG--------------GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHH-STTCE
T ss_pred eccch--------------hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhcc-CCCeE
Confidence 22332 2337899999999875433 233345788999888888877765 33443
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=93.55 E-value=0.04 Score=48.02 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=31.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.|.+|+|+||+|-+|..++.-....|. +|++.+++..
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga---~Vi~~~~s~~ 64 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGA---KLIGTVGTAQ 64 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTC---EEEEEESSHH
T ss_pred CCCEEEEEccccccchHHHHHHHHhCC---eEeecccchH
Confidence 478999999999999999998888884 5678888753
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=93.45 E-value=0.14 Score=40.88 Aligned_cols=29 Identities=24% Similarity=0.300 Sum_probs=25.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+|+|.| +|-+|..-++.|++.|..|
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v 38 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAGARL 38 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBEE
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCCCeE
Confidence 5899999999 5999999999999998544
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=93.34 E-value=0.037 Score=48.80 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=32.4
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccH
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESA 54 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~ 54 (570)
..+|.|.||||++|..|++-|.+ -|.+.-.++..++..++..
T Consensus 5 kikVaIlGATGyvG~elirLL~~-HP~~ei~~l~S~~~aG~~~ 46 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLAN-HPQFRIKVMTADRKAGEQF 46 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTT-CSSEEEEEEECSTTTTSCH
T ss_pred ccEEEEECcccHHHHHHHHHHHh-CCCceEEEEeccccCCCcc
Confidence 45899999999999999987776 5888766565666655543
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=93.27 E-value=0.097 Score=43.06 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=46.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
|++.|.|+ |-+|+.+++.|.+.|.+| .++-.++ ++++ + ++ ......+.|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~v---vvid~d~------~~~~-~---------~~-----------~~~~~~~~g 49 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEV---LAVDINE------EKVN-A---------YA-----------SYATHAVIA 49 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCC---EEEESCH------HHHH-H---------TT-----------TTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeE---EEecCcH------HHHH-H---------HH-----------HhCCcceee
Confidence 56888885 999999999999999876 3433321 2222 1 11 133467889
Q ss_pred cCCCCCCCCChhhhHHHH-hCCccEEEEcCc
Q 008315 93 DISSEDLGLKDSNLKEEL-WNELDVMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~~l-~~~vdiVih~Aa 122 (570)
|.++ .+.++.+ ++++|.||-+..
T Consensus 50 d~~~-------~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 50 NATE-------ENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CTTC-------TTHHHHHTGGGCSEEEECCC
T ss_pred eccc-------chhhhccCCccccEEEEEcC
Confidence 9995 3334344 678898875543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=92.90 E-value=0.13 Score=39.57 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=26.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
|+||+|+|.|. |-.|..+++.|.+.|.+|
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v 31 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTP 31 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCC
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEE
Confidence 68999999997 778999999999999776
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=91.91 E-value=0.13 Score=44.76 Aligned_cols=37 Identities=8% Similarity=0.201 Sum_probs=29.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.|.+|||+|| |-+|...+.-+...|. ++|++..+++
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga--~~Vi~~~~~~ 63 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGA--ENVIVIAGSP 63 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTB--SEEEEEESCH
T ss_pred CCCCEEEEECC-Cccchhheeccccccc--cccccccccc
Confidence 35899999996 8899999988888775 4677877754
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=91.74 E-value=0.067 Score=45.65 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=25.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
=+|.|.||||++|..|++-|.+....+..+..+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~ 35 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA 35 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEec
Confidence 3799999999999999976655332345665554
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=91.57 E-value=0.44 Score=40.07 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=30.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
+.|+|.|.|+||-||+..++-+-+ .++--+|++|+=.++-
T Consensus 1 ~pK~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~lsa~~N~ 40 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHSTLDLIER-NLDRYQVIALTANRNV 40 (150)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHH-TGGGEEEEEEEESSCH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHc-CCCCcEEEEEEeCCCH
Confidence 358999999999999998876654 5554577788766543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=91.11 E-value=0.53 Score=42.82 Aligned_cols=126 Identities=21% Similarity=0.117 Sum_probs=70.9
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHH----HHHhhh---hhHHHHHhhhccccc
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQ----NEVLAK---DLFNVLKEKWGTRLN 80 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~----~~l~~~---~~f~~l~~~~~~~~~ 80 (570)
+-.++++|+|.| .|-+|++++..|.+.| |+++.++....-..+-..|-. +++-+. ..-++|++..|
T Consensus 26 ~kL~~~~VliiG-~GglGs~va~~La~~G--vg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np---- 98 (247)
T d1jw9b_ 26 EALKDSRVLIVG-LGGLGCAASQYLASAG--VGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP---- 98 (247)
T ss_dssp HHHHHCEEEEEC-CSHHHHHHHHHHHHHT--CSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT----
T ss_pred HHHhCCCEEEEC-CCHHHHHHHHHHHHcC--CCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhc----
Confidence 446789999999 5779999999999987 688888754332222111100 000000 11233444443
Q ss_pred ccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCccCCcccCHHHHHHHHHHHHHHHHHHHHHccCceEEEEE
Q 008315 81 SFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAITKFDERYDVAFGINTLGAIHLVNFAKKCVKLKVFVHV 160 (570)
Q Consensus 81 ~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~v~f~~~~~~~~~~Nv~gt~~ll~~a~~~~~lk~fV~v 160 (570)
.-++..+...+. .... .......|+|+.+... ... ...+-++|.+. + ..+|+.
T Consensus 99 ---~~~i~~~~~~~~-------~~~~-~~~~~~~divid~~d~------~~~--------~~~in~~~~~~-~-ip~i~g 151 (247)
T d1jw9b_ 99 ---HIAITPVNALLD-------DAEL-AALIAEHDLVLDCTDN------VAV--------RNQLNAGCFAA-K-VPLVSG 151 (247)
T ss_dssp ---TSEEEEECSCCC-------HHHH-HHHHHTSSEEEECCSS------HHH--------HHHHHHHHHHH-T-CCEEEE
T ss_pred ---ccchhhhhhhhh-------hccc-cccccccceeeeccch------hhh--------hhhHHHHHHHh-C-CCcccc
Confidence 245565555554 4443 3667889999977543 221 12334456555 3 457776
Q ss_pred ecccccC
Q 008315 161 STAYVAG 167 (570)
Q Consensus 161 STa~v~~ 167 (570)
+.....|
T Consensus 152 ~~~~~~g 158 (247)
T d1jw9b_ 152 AAIRMEG 158 (247)
T ss_dssp EEEBTEE
T ss_pred ccccccc
Confidence 6655544
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=91.03 E-value=0.12 Score=44.81 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=30.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.++|+|+|.|+ |..|++++..|.+.+ ++|+++.|+.+
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~---~~i~I~nR~~~ 52 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQ---QNIVLANRTFS 52 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTT---CEEEEEESSHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccC---ceeeeccchHH
Confidence 47899999995 777999999998743 68999999853
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=90.66 E-value=0.19 Score=43.35 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=31.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.+||+|+|.|| |..+++++..|.+.|. +|+++.|++.
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~---~i~I~nRt~~ 52 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDC---AVTITNRTVS 52 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTC---EEEEECSSHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccce---EEEeccchHH
Confidence 47899999995 7789999999999773 5889999754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=90.56 E-value=0.36 Score=41.14 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=29.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|+|.||+|-+|...+..+...|. .+|++..++.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~--~~V~~~~~~~ 63 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVRE 63 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSH
T ss_pred CCCEEEEEeccccceeeeeeccccccc--ccccccccch
Confidence 478999999999999998888887775 4566666553
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=90.30 E-value=0.1 Score=43.94 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=30.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
-++|.|.||.|.+|+.+++.|.+.|++| ++..|.+.
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V---~~~d~~~~ 44 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGYPI---SILDREDW 44 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCE---EEECTTCG
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCCCc---Eecccccc
Confidence 3799999999999999999999999876 46666543
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.02 E-value=0.58 Score=39.80 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=29.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
-.|.+|+|.|+ |-+|...+..+...|. +|+++.++...
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~---~vi~~~~~~~k 63 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGA---ETYVISRSSRK 63 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTC---EEEEEESSSTT
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhccc---cccccccchhH
Confidence 36899999996 9999998877767674 46788887654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=89.95 E-value=0.6 Score=38.99 Aligned_cols=76 Identities=12% Similarity=0.196 Sum_probs=49.2
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEEEEc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITFVAG 92 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~v~g 92 (570)
-+|+|.|. |-+|..+++.|.++|.+| +++...+. ...+++. +. ...++.++.|
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v---~vId~d~~--~~~~~~~-~~--------------------~~~~~~vi~G 56 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNV---TVISNLPE--DDIKQLE-QR--------------------LGDNADVIPG 56 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCE---EEEECCCH--HHHHHHH-HH--------------------HCTTCEEEES
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCE---EEEeccch--hHHHHHH-Hh--------------------hcCCcEEEEc
Confidence 36899996 899999999999998654 44444332 1112221 00 1257899999
Q ss_pred cCCCCCCCCChhhhHH-HHhCCccEEEEcCc
Q 008315 93 DISSEDLGLKDSNLKE-ELWNELDVMVNSAA 122 (570)
Q Consensus 93 Dl~~~~lgls~~~~~~-~l~~~vdiVih~Aa 122 (570)
|.++ ++.++ .-+++++.|+-+..
T Consensus 57 d~~d-------~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 57 DSND-------SSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CTTS-------HHHHHHHTTTTCSEEEECSS
T ss_pred cCcc-------hHHHHHhccccCCEEEEccc
Confidence 9994 44433 34678899886643
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=89.10 E-value=0.16 Score=43.06 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=30.0
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
|+|+|.|+ |-+|..+...|.+.|++| .++.|.+..
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V---~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEV---QGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEE---EEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCce---EEEEcCHHH
Confidence 68999997 999999999999999765 688887654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=89.05 E-value=0.59 Score=39.65 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=27.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.|.+|+|+| +|-+|...+.-+...| .+|++..+++
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~G---a~vi~v~~~~ 60 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYG---AFVVCTARSP 60 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESCH
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhc---ccccccchHH
Confidence 3578999998 6899999988777766 3577777654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.82 E-value=0.21 Score=43.69 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=25.4
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
.+|||+||+|-+|...++-....|.. .|+...+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~--~vi~~~~ 64 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCS--RVVGICG 64 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCS--EEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCc--ceecccc
Confidence 78999999999999999877766653 3444444
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=88.30 E-value=0.44 Score=40.60 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=26.8
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.|.+|+|.|+ |-+|...+.-+...|.. +++..++..
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~---~i~~~~~~~ 65 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAH---VVAFTTSEA 65 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCE---EEEEESSGG
T ss_pred CCCEEEEecc-chHHHHHHHHhhccccc---chhhccchh
Confidence 5899999996 88999988777776743 346666544
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=88.19 E-value=0.2 Score=43.58 Aligned_cols=38 Identities=16% Similarity=0.218 Sum_probs=31.1
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
+.+|||+||+|-+|...++-.-..|.. |++.+|+....
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~---Via~~~~~~k~ 69 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQ---VVAVSGRESTH 69 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCC---EEEEESCGGGH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCC---eEEEecchhHH
Confidence 358999999999999999888888864 46888876554
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=87.95 E-value=0.29 Score=41.89 Aligned_cols=37 Identities=22% Similarity=0.279 Sum_probs=27.6
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
..+|.|.|++|=+|+.+++.+++. +++.-+.++.|..
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~ 40 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREG 40 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEeccc
Confidence 468999999999999999998875 3444344555544
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.14 E-value=0.067 Score=42.52 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=29.2
Q ss_pred hhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 8 EFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 8 ~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+-|+||+|+|.| +|--|.-++..|.+.+- +++.+.|+.
T Consensus 28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak---~v~~~~~r~ 65 (107)
T d2gv8a2 28 ELFVGESVLVVG-GASSANDLVRHLTPVAK---HPIYQSLLG 65 (107)
T ss_dssp GGGTTCCEEEEC-SSHHHHHHHHHHTTTSC---SSEEEECTT
T ss_pred hhcCCCeEEEEC-CCCCHHHHHHHHHHhcC---EEEEEEecC
Confidence 447999999999 68999999999987664 445555544
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=86.06 E-value=0.54 Score=40.91 Aligned_cols=39 Identities=18% Similarity=0.014 Sum_probs=30.4
Q ss_pred CCCEEEE-ECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcc
Q 008315 11 ENKIILV-SGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTE 52 (570)
Q Consensus 11 ~~k~VlI-TGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~ 52 (570)
.|.+|+| +||+|-+|...+.-....|. ++++.+|+..+.
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga---~vI~~v~~~~~~ 67 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRPNL 67 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCTTH
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCC---eEEEEEeccccc
Confidence 4677777 69999999999988777774 567888876553
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=85.84 E-value=0.56 Score=40.31 Aligned_cols=37 Identities=14% Similarity=0.037 Sum_probs=27.8
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
-.|.+|+|.|+ |-+|...+.-+...|+ ++|++..+++
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga--~~Vi~~d~~~ 62 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGA--GRIIGVGSRP 62 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTC--SCEEEECCCH
T ss_pred CCCCEEEEEcC-Ccchhhhhhhhhcccc--cccccccchh
Confidence 36889999986 9999988877777675 4566666643
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=85.71 E-value=0.39 Score=41.18 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=28.8
Q ss_pred CCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 12 NKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 12 ~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|+|.|.|| |-+|..++..|.+.|++| ++..|.+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V---~~~~r~~ 34 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSV---LAWDIDA 34 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEE---EEECSCH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEE---EEEECCH
Confidence 379999995 999999999999999754 6777753
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.07 E-value=0.59 Score=39.30 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=31.4
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
+||+|+|.| .|+.|-.++..|.+.++++ +|+++-+..
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~-~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSI-EVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTS-EEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCC-cEEEEECCC
Confidence 589999999 5999999999999999885 677776554
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=84.26 E-value=1.2 Score=37.83 Aligned_cols=38 Identities=13% Similarity=-0.005 Sum_probs=28.7
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
.|.+|+|.|++ -+|...+..+...|. .+|++..++++.
T Consensus 28 ~GdtVlV~GaG-G~G~~~~~~~~~~g~--~~Vi~~~~~~~k 65 (176)
T d2jhfa2 28 QGSTCAVFGLG-GVGLSVIMGCKAAGA--ARIIGVDINKDK 65 (176)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHTTC--SEEEEECSCGGG
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHcCC--ceEEeecCcHHH
Confidence 57899999995 588888888887764 567777776544
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=84.18 E-value=2.2 Score=35.56 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=29.5
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCc
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADT 51 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~ 51 (570)
|+|.|.|+||-||+..++-+.+ .|+=-+|++|.=.++-
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~-~~d~f~v~~Lsa~~N~ 39 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRH-NPEHFRVVALVAGKNV 39 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH-CTTTEEEEEEEESSCH
T ss_pred CeEEEEcCCcHHHHHHHHHHHh-CCCCcEEEEEEecCcH
Confidence 6899999999999999876654 5654578888765544
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.18 E-value=0.47 Score=47.13 Aligned_cols=98 Identities=12% Similarity=0.163 Sum_probs=58.6
Q ss_pred hhhcCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHH--H-H-HHHhh---hhhHHHHHhhhcccc
Q 008315 7 VEFLENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALR--F-Q-NEVLA---KDLFNVLKEKWGTRL 79 (570)
Q Consensus 7 ~~~~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~r--l-~-~~l~~---~~~f~~l~~~~~~~~ 79 (570)
+.-+++.+|||.|+ |.+|..+++.|...| |+.|.++....-..+-..| + . +++-+ ....+++++.+|
T Consensus 32 ~~~l~~~kVlvvG~-GglG~ei~k~L~~~G--vg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np--- 105 (426)
T d1yovb1 32 QFLLDTCKVLVIGA-GGLGCELLKNLALSG--FRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP--- 105 (426)
T ss_dssp HHHHHHCCEEEECS-STTHHHHHHHHHTTT--CCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST---
T ss_pred HHHHhcCeEEEECC-CHHHHHHHHHHHHcC--CCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCC---
Confidence 33456789999997 559999999999877 5677776554322221111 0 0 01111 112344555444
Q ss_pred cccccCceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCcc
Q 008315 80 NSFISEKITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAAI 123 (570)
Q Consensus 80 ~~~~~~kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa~ 123 (570)
.-+|..+..++. +.. ..++++.|+||.+.-.
T Consensus 106 ----~v~i~~~~~~i~-------~~~--~~~~~~~DlVi~~~Dn 136 (426)
T d1yovb1 106 ----NCNVVPHFNKIQ-------DFN--DTFYRQFHIIVCGLDS 136 (426)
T ss_dssp ----TCCCEEECSCGG-------GBC--HHHHTTCSEEEECCSC
T ss_pred ----CCceEeeecccc-------chH--HHHHHhcchheeccCc
Confidence 246777777776 333 2567899999977543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.07 E-value=1.3 Score=37.37 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=28.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
.|.+|+|.|+ |-+|...+.-+...|. ++|++..+.+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~--~~Vi~~d~~~ 61 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGA--AQVVVTDLSA 61 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTC--SEEEEEESCH
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCC--ceEEeccCCH
Confidence 5789999986 9999999988877775 4667766653
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=83.41 E-value=4 Score=35.03 Aligned_cols=88 Identities=8% Similarity=0.060 Sum_probs=56.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHH----HHHHHHHhhhhhHHHHHhhhcccccccccC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAA----LRFQNEVLAKDLFNVLKEKWGTRLNSFISE 85 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~----~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~ 85 (570)
..+++|.|.| .|.||+.+++.|..-|. +|+...|..+..... +.+. ++++ ..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~~~~l~-ell~-------------------~s 97 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLGM---YVYFYDIENKLPLGNATQVQHLS-DLLN-------------------MS 97 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCCCCTTCEECSCHH-HHHH-------------------HC
T ss_pred ccceEEEEee-cccchhhhhhhcccccc---eEeeccccccchhhhhhhhhhHH-HHHh-------------------hc
Confidence 4689999998 89999999998876553 456666654322110 0011 1111 25
Q ss_pred ceEEEEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 86 KITFVAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 86 kv~~v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
.+..+...++...-++=+++.+ ..+++=.++||.|-
T Consensus 98 Dii~i~~plt~~T~~li~~~~l-~~mk~~a~lIN~aR 133 (188)
T d1sc6a1 98 DVVSLHVPENPSTKNMMGAKEI-SLMKPGSLLINASR 133 (188)
T ss_dssp SEEEECCCSSTTTTTCBCHHHH-HHSCTTEEEEECSC
T ss_pred cceeecccCCcchhhhccHHHH-hhCCCCCEEEEcCc
Confidence 6777777888777777667766 45566667777764
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=83.01 E-value=1.6 Score=38.15 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=52.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..|++|.|.| .|-||+.+++.|..-|. +|++..+..+..... +.....-++.+-+ ...+..
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~---~V~~~d~~~~~~~~~-----~~~~~~~l~~~l~----------~sDii~ 101 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGA---KVITYDIFRNPELEK-----KGYYVDSLDDLYK----------QADVIS 101 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTC---EEEEECSSCCHHHHH-----TTCBCSCHHHHHH----------HCSEEE
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhcc---cccccCccccccccc-----ceeeecccccccc----------cccccc
Confidence 4689999999 89999999999976564 445555443321110 0000000111111 145666
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
+..-++...-++-+.+.. ..+++-.++||.|-
T Consensus 102 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 102 LHVPDVPANVHMINDESI-AKMKQDVVIVNVSR 133 (197)
T ss_dssp ECSCCCGGGTTCBSHHHH-HHSCTTEEEEECSC
T ss_pred ccCCccccccccccHHHH-hhhCCccEEEecCc
Confidence 666666665565555554 44555667777653
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=83.01 E-value=2.8 Score=35.30 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=27.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAA 49 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~ 49 (570)
|+..+|.|.| +|++|+..++.|.+ .+++.-+.+..|++
T Consensus 1 M~kirvgiiG-~G~ig~~~~~~l~~-~~~~elvav~~~~~ 38 (170)
T d1f06a1 1 MTNIRVAIVG-YGNLGRSVEKLIAK-QPDMDLVGIFSRRA 38 (170)
T ss_dssp CCCEEEEEEC-CSHHHHHHHHHHTT-CSSEEEEEEEESSS
T ss_pred CCcceEEEEC-ChHHHHHHHHHHHh-CCCcEEEEEEeccc
Confidence 3456899999 79999998887775 67776555555543
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=82.99 E-value=1.7 Score=36.81 Aligned_cols=35 Identities=9% Similarity=-0.036 Sum_probs=26.9
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
.|.+|+|.|+ |-+|...+.-+...|.. .|++..++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~--~v~~~~~~ 62 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGAS--IIIAVDIV 62 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCS--EEEEEESC
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccc--eeeeeccH
Confidence 5789999997 99999999888777864 45555443
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=82.86 E-value=2.1 Score=37.26 Aligned_cols=95 Identities=8% Similarity=0.025 Sum_probs=56.9
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
..|++|.|.| .|-||+.+++.|..-|. +|+...|........ .. ......-++.+-+ ...+..
T Consensus 47 L~gktvgIiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~-~~--~~~~~~~l~~ll~----------~sD~i~ 109 (193)
T d1mx3a1 47 IRGETLGIIG-LGRVGQAVALRAKAFGF---NVLFYDPYLSDGVER-AL--GLQRVSTLQDLLF----------HSDCVT 109 (193)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTC---EEEEECTTSCTTHHH-HH--TCEECSSHHHHHH----------HCSEEE
T ss_pred eeCceEEEec-cccccccceeeeecccc---ceeeccCcccccchh-hh--ccccccchhhccc----------cCCEEE
Confidence 5789999999 79999999999976553 445556544332211 10 0000000111111 245777
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
+...++...-++-+.+.. ..+++--++||+|-
T Consensus 110 ~~~plt~~T~~li~~~~l-~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 110 LHCGLNEHNHHLINDFTV-KQMRQGAFLVNTAR 141 (193)
T ss_dssp ECCCCCTTCTTSBSHHHH-TTSCTTEEEEECSC
T ss_pred EeecccccchhhhhHHHH-hccCCCCeEEecCC
Confidence 778888777777666655 45555667777764
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.63 E-value=1 Score=37.01 Aligned_cols=22 Identities=18% Similarity=0.264 Sum_probs=19.6
Q ss_pred EEEEECCccHhHHHHHHHHHHh
Q 008315 14 IILVSGVTGFVAKVFIEKILRV 35 (570)
Q Consensus 14 ~VlITGaTGFlG~~Lve~Ll~~ 35 (570)
+|.|.|++|=+|+.+++.+.+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~ 22 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA 22 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS
T ss_pred CEEEECCCCHHHHHHHHHHHhC
Confidence 6899999999999999987764
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.30 E-value=1.4 Score=35.85 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=30.1
Q ss_pred hhhcCCCEEEEECCc---cHhHHHHHHHHHHhCCCccEEEEEE
Q 008315 7 VEFLENKIILVSGVT---GFVAKVFIEKILRVQPNVKKLYLLI 46 (570)
Q Consensus 7 ~~~~~~k~VlITGaT---GFlG~~Lve~Ll~~g~~V~~i~~lv 46 (570)
..||+.++|.|.||| |-.|..+++.|++.+ -.+||.+-
T Consensus 3 ~~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~--~g~v~pVn 43 (129)
T d2csua1 3 DYFFNPKGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVN 43 (129)
T ss_dssp CTTTSCSEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEEC
T ss_pred hHhCCCCeEEEEccCCCCCCcHHHHHHHHHHcC--CCcEEEec
Confidence 458899999999999 999999999987644 24666654
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.29 E-value=0.42 Score=42.18 Aligned_cols=31 Identities=19% Similarity=0.091 Sum_probs=25.7
Q ss_pred CEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEe
Q 008315 13 KIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIR 47 (570)
Q Consensus 13 k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR 47 (570)
|+|.|.| .||+|..++..|.+.|++| ++...
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V---~g~D~ 31 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEV---IGVDV 31 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEE---EEECS
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcE---EEEeC
Confidence 5799997 7999999999999999765 55543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=82.13 E-value=0.38 Score=41.21 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=31.3
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
++++|+|.|+ |..|++++..|.+.|. ++|+++.|+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~--~~I~I~nR~~~ 52 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGF--EKLKIYARNVK 52 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTC--CCEEEECSCHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEecccHH
Confidence 6789999995 8899999999998774 67888888753
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=81.93 E-value=2.7 Score=36.07 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=30.0
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
+.|++|.|.| .|-||+.+++.|..-|. +|+...|.++
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~---~v~~~d~~~~ 76 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGA---QVRGFSRTPK 76 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred ccCceEEEec-cccccccceeeeecccc---cccccccccc
Confidence 5799999999 68899999999987664 5667777543
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=81.75 E-value=1.1 Score=35.98 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=30.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.+++|+|.| +||+|-.+++.|.+.| .+|.++.|++.
T Consensus 29 ~~~~vvIIG-gG~iG~E~A~~l~~~g---~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVG-GGVIGLELAATARTAG---VHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTT---CEEEEEESSSS
T ss_pred cCCeEEEEC-cchhHHHHHHHhhccc---ceEEEEeeccc
Confidence 368999999 5999999999999988 45678888764
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=81.29 E-value=2.3 Score=35.79 Aligned_cols=37 Identities=16% Similarity=0.078 Sum_probs=27.5
Q ss_pred CCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCC
Q 008315 11 ENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAAD 50 (570)
Q Consensus 11 ~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~ 50 (570)
.|.+|+|.|+ |.+|...+..+...|. ++|++..+++.
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~--~~vi~~~~~~~ 64 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGA--SRIIGVDINKD 64 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTC--SEEEEECSCGG
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhc--CceEEEcccHH
Confidence 5789999998 5689998888888775 45666655443
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.12 E-value=3 Score=38.71 Aligned_cols=26 Identities=27% Similarity=0.235 Sum_probs=20.6
Q ss_pred CccHhHHHHHHHHHHhCCCccEEEEEEec
Q 008315 20 VTGFVAKVFIEKILRVQPNVKKLYLLIRA 48 (570)
Q Consensus 20 aTGFlG~~Lve~Ll~~g~~V~~i~~lvR~ 48 (570)
+||-+|.+|++.++++|++| .++.++
T Consensus 44 SSGk~G~alA~~~~~~Ga~V---~li~g~ 69 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGV---LFLYRA 69 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEE---EEEEET
T ss_pred CchHHHHHHHHHHHHcCCEE---EEEecC
Confidence 36889999999999999766 455444
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=80.98 E-value=0.9 Score=38.69 Aligned_cols=30 Identities=13% Similarity=0.084 Sum_probs=26.6
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
+.||+|+|.|.+..+|+-|...|.+.|..|
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatV 64 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTT 64 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEE
T ss_pred cccceEEEEeccccccHHHHHHHHHhhccc
Confidence 579999999999999999999998887544
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=80.94 E-value=1.9 Score=37.26 Aligned_cols=96 Identities=13% Similarity=0.127 Sum_probs=58.5
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCccEEEEEEecCCcccHHHHHHHHHhhhhhHHHHHhhhcccccccccCceEE
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNVKKLYLLIRAADTESAALRFQNEVLAKDLFNVLKEKWGTRLNSFISEKITF 89 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V~~i~~lvR~~~~~~~~~rl~~~l~~~~~f~~l~~~~~~~~~~~~~~kv~~ 89 (570)
.++++|.|.| .|-||+.+++.|..-|. +|+...|............ +. .+..+.+- +....+..
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~---~v~~~d~~~~~~~~~~~~~--~~---~~~~l~~~-------l~~sD~v~ 105 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDV---HLHYTDRHRLPESVEKELN--LT---WHATREDM-------YPVCDVVT 105 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTC---EEEEECSSCCCHHHHHHHT--CE---ECSSHHHH-------GGGCSEEE
T ss_pred ccccceeecc-ccccchhhhhhhhccCc---eEEEEeecccccccccccc--cc---ccCCHHHH-------HHhccchh
Confidence 4689999999 79999999999977664 4567777654432221100 00 00011110 01256777
Q ss_pred EEccCCCCCCCCChhhhHHHHhCCccEEEEcCc
Q 008315 90 VAGDISSEDLGLKDSNLKEELWNELDVMVNSAA 122 (570)
Q Consensus 90 v~gDl~~~~lgls~~~~~~~l~~~vdiVih~Aa 122 (570)
+...+++..-++=+.+.. ..+++-.++||+|-
T Consensus 106 ~~~plt~~T~~li~~~~l-~~mk~ga~lIN~aR 137 (188)
T d2naca1 106 LNCPLHPETEHMINDETL-KLFKRGAYIVNTAR 137 (188)
T ss_dssp ECSCCCTTTTTCBSHHHH-TTSCTTEEEEECSC
T ss_pred hcccccccchhhhHHHHH-HhCCCCCEEEecCc
Confidence 778888777777666655 45556668888764
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.21 E-value=0.45 Score=39.75 Aligned_cols=29 Identities=28% Similarity=0.315 Sum_probs=26.2
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+|||.|| |.+|..-++.|++.|..|
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~V 39 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKL 39 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEE
Confidence 68999999996 999999999999999544
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.08 E-value=1.7 Score=37.08 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=26.7
Q ss_pred cCCCEEEEECCccHhHHHHHHHHHHhCCCc
Q 008315 10 LENKIILVSGVTGFVAKVFIEKILRVQPNV 39 (570)
Q Consensus 10 ~~~k~VlITGaTGFlG~~Lve~Ll~~g~~V 39 (570)
++||+|.|.|.+.-+|+-|...|+++|..|
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatV 66 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATV 66 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEE
T ss_pred cccceEEEEecCCccchHHHHHHHhccCce
Confidence 479999999999999999999999987543
|